RLG00000004737

Nuclear pore complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0007827
Physical Location & Seq
Reverse (-)
61820039 .. 61825200
5162 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004737

Sequence Viewer

Length: 2859 bp
ATGTTTGGTTCTACGAGCCCTTTTGGGCAGTCATCTAACAGCCCATTTGGGTCCCAGTCGGTGTTTGGGCAAAGCAGCAACACAAGTAACAATCCTTTTGCTCCCCAGCCCTTTGGTAGCACCACTCCATTTGGTGCCCAGACAGGGAGTTCCCTATTTGGGGGAACTTCAACTGGCGTATTTGGTCAAACCCAATCCTCGCCTTTTGGTGCTTCATCCTCGCCAGCTTTCGGACAGCAGAGTTCTCCATTTGGAGCATCTTCTACTCCAGCATTTGGTGCACCATCGTCTACTCAAACAAGTCCATTTGGTGGAGCATCCGGTACGTCTGCTTTTGGTCAGAAGCCCGCTTTTGGAGCATTTGGGTCGAGTCCTGCTCAAACAAGTCCATTTGGAAGCACAGCTCAACCATCACAACCAGCATTTGGAAGCAATATGTTTGGTACCACCTCTACACCATTTGGCACAAGTCAGCCTGCATTTGGCACTAATACTGCCCCAGCCTTTGGTTCAACGAACACTACAGCCTTTGGTTCAACGAATACCACAGGCTTTGGTGGCCAGAGCACCCCTGGTTTTGGTGGCCAAGGCACTCCAGCCTTTGGGGCCACAAGCGCTTCACCTTTTGGTAGTACAAGTACTCCGGCGTTTGGTGCTCCAAGTACTCCTACCTTTGGCTCAACACCAAGTCCTACATTTGGAAGCACAGGATCTGCATTTGGGACAACAAGTTCCAACTTGTTTGGATCAGGGGGAGCATTTGGGGCTTCAACCACCCCAGCTTTTGGTCAATCTAGCTCAGCTTTTGGTACTACAACAAGTGCTCCTGCTTTTGGTCAATCAAGTTCAGGTTTTGGCTTTTCAACAAGTGCTCCTGCATTTGGCCAATCAAGTTCAACCTTTGGTAGCACCCAATTTGCGGCTTCATCTCCTTTCGGAGCGCAGAGTTCGCCATCTCCTTTCGGAGGGCAGAGTTCGCCATTTGGGGCTCAGTCAACAACACCAACACTTGGAAACACTGCCTTTGGACAGCCAGCTTTTGGGGGCCAACGGGGTGGAAGTAGAGTGACTGCTTACACAGGCACATCTGAACCAGATAGTAATGGAATGGGGAAATTGGAGTCAATATCAGCAATGCCAGCCTATAAAGAAAAAAGTCACGAGGAATTGAGATGGGAGGATTACCAATTAGGGGATAAGGGTGGACCATCTCCTGCTGGTGCTGGTAGCTTTGGCATATCAACTGTACAGACAAATACTTTGAATCCTAATCCTGCACCATCGTTTTCTCAAACATCTTCAAGTCCTTTTAATACCTCAACCTCATCTGGTTTATTTGCCCAAAAACCCTCGTCCTTTCCTTCTACTGGTTTTGGTGTTACTTCATCTTCACCATTTAGTTCAACTTCACCGTTTAGTTCTTCATCAACTCAAACCAATTTTTTTACCCCTGCATCATCTGCCTCACCATTTGGCCAAACGTCGTCTCCAGCTATTTTTAGTTCACCGTCTTCCTTTTCCTTCTCTACCCCGGCTACATCATCCACTCCCTCATTTAATTTTCCCACTCCATCAAACCCACAGACACAGTTTGGTCAAACAGGCACTACCTCCTTTGGGCTGAATCCATCTACCTTTGGTTCAAACTTGTTCAATAGTACTTCCAGTTTGCAGAGCAGTTCATTGGGTACTACAAGCAACCAACTGGGTCTTACTCAACCAGCTCCTGCTTTTCCCACTTTCCAGACGTCTCAGCCTCTTCAGTCTAGTCCTTTTGCCTTCATTGATTGCCTAACCTTATCAATTGGTGCTTTTGGCTTTGTTGCGGATAAACCTGCACCGGTTAGGGTGACATCCATCCTGACTCCTCGACACCTGTCACAACGCCGGATCAGATTACCTGCAAGAAAATATAATCCTAAGAATGATAACCCAAAGGCTTTTTTCAGTGATGATGAAGAAACACCCTCTACACCCAAGGGGGATGTTGTTTTCCATCCCAGGGAAAACCCAAGAGCACTCGTCATTCGTCCCCAAGAACAGTGGCCTTTTAGAGCGAGTGCTGAGAAAGCAACAGCACTGAAGAATACAACTACTCCAGTCCATGAGAATGGAAAAATTTCGGGAGCAGCACTCTTTGGGGGATCCAACTCGGAGGATAAAGACGAACCAGAAACTCTGCAAGAAAATGGTGCTGTTAAGGAGCATTTAAATCATGTCAAAGCTGTTCAGAAACCTAATGGAGTACATGATGATCACGCTGTTCAGAAAGGGGACTCGTATACAACACTAAGTGGGCACAGAGCTGGTGAGGCTGCAATTGTGTATGAGCATGGTGCTGACATTGAGGCACAAATGCCGAAGCTCCGACGCTCTGATTACTACACAGAGCCCCGAATCCAAGAACTGGCGGCAAAGGAAAGGGCAGAGCCAGGGTTCTGCTGTCGTGTGAAGGACTTTGTGGTTGGGCGACATGGTTATGGTAGCATTAAGTTCTTGGGTGAGACAGATGTAAGGCGCCTTGATCTTGAGGCTTTGGTGCAGTTCAATAATAAGGAGGTAATCGTGTACCGTGATGAGAACAAGAAACCTCCTGTCGGGCAAGGGCTTAATAAACCTGCTGAGGTTACACTTCTCAACATTAAATGCATCGAGAAGAAGACTGGGCTTCAGTATACAGAAGGACTAAAAGTTGAGAAATACAAGGAGATGCTGAAGAGGAAGGCCGAGGAACAAGGTGCCAAGTTTGTCTCCTTTGACCCTAAGAAGGAAGAGTGGACGTTCATGGTCAACCACTTCAGTGAGTACAAGTTGAGAGATGAAGACGACTGGGATGTGGATGCTGCCCAAGATTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000972 GO:0000973 GO:0003674 GO:0003676 GO:0003682 GO:0003712 GO:0003713 GO:0003723 GO:0003729 GO:0005048 GO:0005198 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0006999 GO:0008104 GO:0008139 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016032 GO:0016043 GO:0016234 GO:0016604 GO:0017038 GO:0017056 GO:0019219 GO:0019222 GO:0022607 GO:0031080 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031503 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033120 GO:0033218 GO:0033365 GO:0034397 GO:0034398 GO:0034399 GO:0034504 GO:0034613 GO:0034622 GO:0034641 GO:0034645 GO:0042277 GO:0042405 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044614 GO:0044615 GO:0045184 GO:0045935 GO:0046483 GO:0046907 GO:0046931 GO:0048024 GO:0048026 GO:0048518 GO:0048522 GO:0048583 GO:0050000 GO:0050657 GO:0050658 GO:0050684 GO:0050685 GO:0050789 GO:0050794 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051254 GO:0051276 GO:0051292 GO:0051640 GO:0051641 GO:0051649 GO:0051704 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1902446 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903508 GO:1990841 GO:1990904 GO:2000030 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03013 ko05164 map03013 map05164
Pfam Domains
Protein Families
Nucleoporin2

Protein Analysis

953

Amino Acids

99.04

Weight (kDa)

6.66

Isoelectric Point (pI)

57.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nup98_GLEBS PF21240 376 - 395 3.1e-06 Nup98, Gle2-binding sequence
Nucleoporin2 PF04096 792 - 938 2.6e-44 Nup98-96 autopeptidase S59
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1751
Acc36I ACCTGC 3 cut(s) 1843, 1909, 2626
Acc65I GGTACC 1 cut(s) 443
AccB1I GGYRCC 4 cut(s) 134, 443, 2517, 2738
AccB7I CCANNNNNTGG 9 cut(s) 275, 311, 425, 506, 602, 785, 1010, 1040, 2407
AccI GTMKAC 3 cut(s) 290, 2282, 2675
AciI CCGC 4 cut(s) 348, 920, 1826, 2411
AclWI GGATC 5 cut(s) 718, 754, 1898, 2139, 2152
AcoI YGGCCR 4 cut(s) 559, 583, 883, 1474
AcsI RAATTY 1 cut(s) 2118
AcuI CTGAAG 5 cut(s) 1745, 2102, 2654, 2735, 2782
AcyI GRCGYC 2 cut(s) 1748, 2518
AdeI CACNNNGTG 1 cut(s) 2294
AfeI AGCGCT 1 cut(s) 616
AgeI ACCGGT 1 cut(s) 1840
AjnI CCWGG 3 cut(s) 571, 2000, 2431
AleI CACNNNNGTG 1 cut(s) 2799
AloI GAACNNNNNNTCC 2 cut(s) 715, 747
Alw21I GWGCWC 6 cut(s) 283, 569, 658, 826, 874, 2020
Alw26I GTCTC 4 cut(s) 1491, 1755, 2498, 2755
Alw44I GTGCAC 1 cut(s) 279
AlwI GGATC 5 cut(s) 718, 754, 1898, 2139, 2152
AlwNI CAGNNNCTG 2 cut(s) 713, 1727
Aor51HI AGCGCT 1 cut(s) 616
AoxI GGCC 8 cut(s) 559, 583, 606, 883, 1045, 1474, 2045, 2724
ApaLI GTGCAC 1 cut(s) 279
ApeKI GCWGC 4 cut(s) 75, 2129, 2315, 2843
ApoI RAATTY 1 cut(s) 2118
ArsI GACNNNNNNTTYG 2 cut(s) 1243, 1275
AsiGI ACCGGT 1 cut(s) 1840
Asp700I GAANNNNTTC 1 cut(s) 2119
Asp718I GGTACC 1 cut(s) 443
AspLEI GCGC 3 cut(s) 617, 943, 2520
AspS9I GGNCC 4 cut(s) 51, 606, 1045, 1205
AsuC2I CCSGG 1 cut(s) 1532
AsuHPI GGTGA 8 cut(s) 612, 1383, 1401, 1458, 1497, 1861, 2321, 2513
AvaII GGWCC 2 cut(s) 51, 1205
BaeGI GKGCMC 3 cut(s) 139, 283, 2301
BalI TGGCCA 4 cut(s) 561, 585, 885, 1476
BamHI GGATCC 1 cut(s) 2144
BanI GGYRCC 4 cut(s) 134, 443, 2517, 2738
BanII GRGCYC 3 cut(s) 20, 991, 2394
BauI CACGAG 1 cut(s) 1160
BbsI GAAGAC 3 cut(s) 1503, 2666, 2829
Bbv12I GWGCWC 6 cut(s) 283, 569, 658, 826, 874, 2020
BbvCI CCTCAGC 1 cut(s) 2622
BbvI GCAGC 4 cut(s) 87, 2141, 2302, 2830
BcgI CGANNNNNNTGC 2 cut(s) 348, 382
BciT130I CCWGG 3 cut(s) 573, 2002, 2433
BclI TGATCA 1 cut(s) 2254
BcnI CCSGG 1 cut(s) 1532
BcoDI GTCTC 4 cut(s) 1491, 1755, 2498, 2755
BfaI CTAG 2 cut(s) 795, 1767
BfmI CTRYAG 1 cut(s) 522
BfoI RGCGCY 2 cut(s) 618, 2521
BfuAI ACCTGC 3 cut(s) 1843, 1909, 2626
BglI GCCNNNNNGGC 1 cut(s) 605
BisI GCNGC 6 cut(s) 76, 921, 2130, 2316, 2412, 2844
BlpI GCTNAGC 1 cut(s) 799
BlsI GCNGC 6 cut(s) 77, 922, 2131, 2317, 2413, 2845
BmcAI AGTACT 3 cut(s) 640, 664, 1660
Bme1390I CCNGG 4 cut(s) 573, 1532, 2002, 2433
Bme18I GGWCC 2 cut(s) 51, 1205
BmgT120I GGNCC 4 cut(s) 51, 606, 1045, 1205
BmiI GGNNCC 9 cut(s) 52, 53, 136, 445, 607, 1046, 2146, 2519, 2740
BmrFI CCNGG 4 cut(s) 573, 1532, 2002, 2433
BmrI ACTGGG 4 cut(s) 49, 1715, 2673, 2839
BmsI GCATC 6 cut(s) 266, 326, 1463, 2658, 2700, 2830
BmuI ACTGGG 4 cut(s) 49, 1715, 2673, 2839
BoxI GACNNNNGTC 1 cut(s) 1876
BpiI GAAGAC 3 cut(s) 1503, 2666, 2829
BplI GAGNNNNNCTC 4 cut(s) 361, 393, 2118, 2150
BpmI CTGGAG 4 cut(s) 252, 579, 1473, 2082
Bpu10I CCTNAGC 1 cut(s) 2622
Bpu1102I GCTNAGC 1 cut(s) 799
BpuEI CTTGAG 1 cut(s) 2549
BpuMI CCSGG 1 cut(s) 1532
BsaHI GRCGYC 2 cut(s) 1748, 2518
BsaJI CCNNGG 8 cut(s) 571, 586, 1530, 1977, 2000, 2001, 2432, 2727
BsaWI WCCGGW 2 cut(s) 320, 1840
Bse118I RCCGGY 1 cut(s) 1840
Bse1I ACTGG 9 cut(s) 55, 178, 1372, 1665, 1710, 2099, 2412, 2668, 2834
Bse3DI GCAATG 1 cut(s) 1140
BseBI CCWGG 3 cut(s) 573, 2002, 2433
BseDI CCNNGG 8 cut(s) 571, 586, 1530, 1977, 2000, 2001, 2432, 2727
BseGI GGATG 9 cut(s) 215, 317, 1541, 1853, 1857, 1990, 1996, 2839, 2845
BseMI GCAATG 1 cut(s) 1140
BseMII CTCAG 5 cut(s) 813, 1004, 1766, 2055, 2613
BseNI ACTGG 9 cut(s) 55, 178, 1372, 1665, 1710, 2099, 2412, 2668, 2834
BseRI GAGGAG 1 cut(s) 1857
BseSI GKGCMC 3 cut(s) 139, 283, 2301
BseXI GCAGC 4 cut(s) 87, 2141, 2302, 2830
BseYI CCCAGC 3 cut(s) 105, 499, 778
BsgI GTGCAG 3 cut(s) 1260, 1821, 2561
BshFI GGCC 8 cut(s) 561, 585, 608, 885, 1047, 1476, 2047, 2726
BshNI GGYRCC 4 cut(s) 134, 443, 2517, 2738
BshTI ACCGGT 1 cut(s) 1840
BsiHKAI GWGCWC 6 cut(s) 283, 569, 658, 826, 874, 2020
BsiSI CCGG 5 cut(s) 321, 644, 1532, 1841, 1888
BslFI GGGAC 4 cut(s) 37, 736, 2016, 2288
BsmAI GTCTC 4 cut(s) 1491, 1755, 2498, 2755
BsmBI CGTCTC 2 cut(s) 1491, 1755
BsmFI GGGAC 4 cut(s) 37, 736, 2016, 2288
BsnI GGCC 8 cut(s) 561, 585, 608, 885, 1047, 1476, 2047, 2726
Bsp1407I TGTACA 1 cut(s) 1246
Bsp143I GATC 6 cut(s) 710, 746, 1890, 2144, 2254, 2524
Bsp1720I GCTNAGC 1 cut(s) 799
BspACI CCGC 4 cut(s) 348, 920, 1826, 2411
BspANI GGCC 8 cut(s) 561, 585, 608, 885, 1047, 1476, 2047, 2726
BspCNI CTCAG 5 cut(s) 812, 1003, 1765, 2056, 2614
BspLI GGNNCC 9 cut(s) 52, 53, 136, 445, 607, 1046, 2146, 2519, 2740
BspMI ACCTGC 3 cut(s) 1843, 1909, 2626
BspPI GGATC 5 cut(s) 718, 754, 1898, 2139, 2152
BspT107I GGYRCC 4 cut(s) 134, 443, 2517, 2738
BsrDI GCAATG 1 cut(s) 1140
BsrFI RCCGGY 1 cut(s) 1840
BsrGI TGTACA 1 cut(s) 1246
BsrI ACTGG 9 cut(s) 55, 178, 1372, 1665, 1710, 2099, 2412, 2668, 2834
BssAI RCCGGY 1 cut(s) 1840
BssECI CCNNGG 8 cut(s) 571, 586, 1530, 1977, 2000, 2001, 2432, 2727
BssMI GATC 6 cut(s) 710, 746, 1890, 2144, 2254, 2524
BssNAI GTATAC 2 cut(s) 2283, 2676
BssNI GRCGYC 2 cut(s) 1748, 2518
BssSI CACGAG 1 cut(s) 1160
BssT1I CCWWGG 2 cut(s) 586, 1977
Bst1107I GTATAC 2 cut(s) 2283, 2676
Bst2BI CACGAG 1 cut(s) 1160
Bst2UI CCWGG 3 cut(s) 573, 2002, 2433
Bst4CI ACNGT 6 cut(s) 1246, 1413, 1509, 1590, 2043, 2573
Bst6I CTCTTC 3 cut(s) 1764, 2711, 2766
BstACI GRCGYC 2 cut(s) 1748, 2518
BstAPI GCANNNNNTGC 2 cut(s) 278, 1460
BstAUI TGTACA 1 cut(s) 1246
BstC8I GCNNGC 5 cut(s) 225, 348, 477, 1035, 1140
BstDEI CTNAG 8 cut(s) 799, 990, 1752, 1920, 2064, 2291, 2622, 2763
BstENI CCTNNNNNAGG 1 cut(s) 963
BstF5I GGATG 9 cut(s) 215, 317, 1541, 1853, 1857, 1990, 1996, 2839, 2845
BstH2I RGCGCY 2 cut(s) 618, 2521
BstHHI GCGC 3 cut(s) 617, 943, 2520
BstKTI GATC 6 cut(s) 713, 749, 1893, 2147, 2257, 2527
BstMAI GTCTC 4 cut(s) 1491, 1755, 2498, 2755
BstMBI GATC 6 cut(s) 710, 746, 1890, 2144, 2254, 2524
BstNI CCWGG 3 cut(s) 573, 2002, 2433
BstPAI GACNNNNGTC 1 cut(s) 1876
BstSCI CCNGG 4 cut(s) 571, 1530, 2000, 2431
BstSFI CTRYAG 1 cut(s) 522
BstSLI GKGCMC 3 cut(s) 139, 283, 2301
BstV1I GCAGC 4 cut(s) 87, 2141, 2302, 2830
BstV2I GAAGAC 3 cut(s) 1503, 2666, 2829
BstX2I RGATCY 2 cut(s) 710, 2144
BstXI CCANNNNNNTGG 3 cut(s) 113, 1055, 2111
BstYI RGATCY 2 cut(s) 710, 2144
BstZ17I GTATAC 2 cut(s) 2283, 2676
BsuRI GGCC 8 cut(s) 561, 585, 608, 885, 1047, 1476, 2047, 2726
BtsCI GGATG 9 cut(s) 215, 317, 1541, 1853, 1857, 1990, 1996, 2839, 2845
BtsI GCAGTG 1 cut(s) 1017
BtsIMutI CAGTG 5 cut(s) 1017, 1954, 2048, 2078, 2806
BveI ACCTGC 3 cut(s) 1843, 1909, 2626
Cac8I GCNNGC 5 cut(s) 225, 348, 477, 1035, 1140
CaiI CAGNNNCTG 2 cut(s) 713, 1727
CfoI GCGC 3 cut(s) 617, 943, 2520
Cfr10I RCCGGY 1 cut(s) 1840
Cfr13I GGNCC 4 cut(s) 51, 606, 1045, 1205
CseI GACGC 1 cut(s) 2379
CspAI ACCGGT 1 cut(s) 1840
CspCI CAANNNNNGTGG 6 cut(s) 112, 147, 535, 570, 2024, 2059
CviAII CATG 6 cut(s) 2105, 2216, 2249, 2333, 2474, 2785
DdeI CTNAG 8 cut(s) 799, 990, 1752, 1920, 2064, 2291, 2622, 2763
DinI GGCGCC 1 cut(s) 2519
DpnI GATC 6 cut(s) 712, 748, 1892, 2146, 2256, 2526
DpnII GATC 6 cut(s) 710, 746, 1890, 2144, 2254, 2524
DraI TTTAAA 1 cut(s) 2211
DraIII CACNNNGTG 1 cut(s) 2294
EaeI YGGCCR 4 cut(s) 559, 583, 883, 1474
Eam1104I CTCTTC 3 cut(s) 1764, 2711, 2766
EarI CTCTTC 3 cut(s) 1764, 2711, 2766
Eco130I CCWWGG 2 cut(s) 586, 1977
Eco24I GRGCYC 3 cut(s) 20, 991, 2394
Eco47I GGWCC 2 cut(s) 51, 1205
Eco47III AGCGCT 1 cut(s) 616
Eco57I CTGAAG 5 cut(s) 1745, 2102, 2654, 2735, 2782
EcoNI CCTNNNNNAGG 1 cut(s) 963
EcoO109I RGGNCCY 1 cut(s) 51
EcoRII CCWGG 3 cut(s) 571, 2000, 2431
EcoT14I CCWWGG 2 cut(s) 586, 1977
EcoT22I ATGCAT 1 cut(s) 2651
EcoT38I GRGCYC 3 cut(s) 20, 991, 2394
EgeI GGCGCC 1 cut(s) 2519
EheI GGCGCC 1 cut(s) 2519
ErhI CCWWGG 2 cut(s) 586, 1977
Esp3I CGTCTC 2 cut(s) 1491, 1755
FaeI CATG 6 cut(s) 2108, 2219, 2252, 2336, 2477, 2788
FaqI GGGAC 4 cut(s) 37, 736, 2016, 2288
FatI CATG 6 cut(s) 2104, 2215, 2248, 2332, 2473, 2784
FauI CCCGC 1 cut(s) 355
FbaI TGATCA 1 cut(s) 2254
FblI GTMKAC 3 cut(s) 290, 2282, 2675
Fnu4HI GCNGC 6 cut(s) 76, 921, 2130, 2316, 2412, 2844
FokI GGATG 9 cut(s) 202, 304, 1528, 1840, 1844, 1983, 1997, 2846, 2852
FriOI GRGCYC 3 cut(s) 20, 991, 2394
Fsp4HI GCNGC 6 cut(s) 76, 921, 2130, 2316, 2412, 2844
FspBI CTAG 2 cut(s) 795, 1767
GlaI GCGC 3 cut(s) 616, 942, 2519
GluI GCNGC 6 cut(s) 76, 921, 2130, 2316, 2412, 2844
GsaI CCCAGC 3 cut(s) 109, 503, 782
GsuI CTGGAG 4 cut(s) 252, 579, 1473, 2082
HaeII RGCGCY 2 cut(s) 618, 2521
HaeIII GGCC 8 cut(s) 561, 585, 608, 885, 1047, 1476, 2047, 2726
HapII CCGG 5 cut(s) 321, 644, 1532, 1841, 1888
HgaI GACGC 1 cut(s) 2379
HhaI GCGC 3 cut(s) 617, 943, 2520
Hin1I GRCGYC 2 cut(s) 1748, 2518
Hin1II CATG 6 cut(s) 2108, 2219, 2252, 2336, 2477, 2788
Hin6I GCGC 3 cut(s) 615, 941, 2518
HinP1I GCGC 3 cut(s) 615, 941, 2518
HincII GTYRAC 2 cut(s) 996, 2791
HindII GTYRAC 2 cut(s) 996, 2791
HinfI GANTC 7 cut(s) 370, 1121, 1264, 1624, 1864, 2276, 2397
HpaII CCGG 5 cut(s) 321, 644, 1532, 1841, 1888
HphI GGTGA 8 cut(s) 612, 1383, 1401, 1458, 1497, 1861, 2321, 2513
Hpy188III TCNNGA 6 cut(s) 1160, 1744, 1861, 2124, 2528, 2653
Hpy99I CGWCG 2 cut(s) 1486, 2373
HpyAV CCTTC 7 cut(s) 1371, 1531, 1789, 2446, 2675, 2716, 2761
HpyCH4III ACNGT 6 cut(s) 1246, 1413, 1509, 1590, 2043, 2573
HpyCH4IV ACGT 4 cut(s) 326, 1481, 1748, 2780
HpyF3I CTNAG 8 cut(s) 799, 990, 1752, 1920, 2064, 2291, 2622, 2763
HpySE526I ACGT 4 cut(s) 326, 1481, 1748, 2780
Hsp92I GRCGYC 2 cut(s) 1748, 2518
Hsp92II CATG 6 cut(s) 2108, 2219, 2252, 2336, 2477, 2788
HspAI GCGC 3 cut(s) 615, 941, 2518
KasI GGCGCC 1 cut(s) 2517
KflI GGGWCCC 1 cut(s) 51
KpnI GGTACC 1 cut(s) 447
Ksp22I TGATCA 1 cut(s) 2254
Kzo9I GATC 6 cut(s) 710, 746, 1890, 2144, 2254, 2524
Lsp1109I GCAGC 4 cut(s) 87, 2141, 2302, 2830
LweI GCATC 6 cut(s) 266, 326, 1463, 2658, 2700, 2830
MaeI CTAG 2 cut(s) 795, 1767
MaeII ACGT 4 cut(s) 326, 1481, 1748, 2780
MaeIII GTNAC 7 cut(s) 86, 1066, 1157, 1378, 1849, 1878, 2626
MalI GATC 6 cut(s) 712, 748, 1892, 2146, 2256, 2526
MboI GATC 6 cut(s) 710, 746, 1890, 2144, 2254, 2524
MfeI CAATTG 2 cut(s) 1803, 2319
MflI RGATCY 2 cut(s) 710, 2144
MlsI TGGCCA 4 cut(s) 561, 585, 885, 1476
MluCI AATT 9 cut(s) 914, 1115, 1166, 1187, 1438, 1558, 1803, 2118, 2319
MluNI TGGCCA 4 cut(s) 561, 585, 885, 1476
Mly113I GGCGCC 1 cut(s) 2518
MlyI GAGTC 4 cut(s) 379, 1130, 1858, 2270
MmeI TCCRAC 3 cut(s) 759, 2172, 2392
Mox20I TGGCCA 4 cut(s) 561, 585, 885, 1476
Mph1103I ATGCAT 1 cut(s) 2651
MroXI GAANNNNTTC 1 cut(s) 2119
MscI TGGCCA 4 cut(s) 561, 585, 885, 1476
MseI TTAA 7 cut(s) 1311, 1557, 2199, 2210, 2490, 2610, 2643
MslI CAYNNNNRTG 3 cut(s) 2109, 2478, 2799
Msp20I TGGCCA 4 cut(s) 561, 585, 885, 1476
MspI CCGG 5 cut(s) 321, 644, 1532, 1841, 1888
MspR9I CCNGG 4 cut(s) 573, 1532, 2002, 2433
MunI CAATTG 2 cut(s) 1803, 2319
MvaI CCWGG 3 cut(s) 573, 2002, 2433
NarI GGCGCC 1 cut(s) 2518
NciI CCSGG 1 cut(s) 1532
NdeII GATC 6 cut(s) 710, 746, 1890, 2144, 2254, 2524
NlaIII CATG 6 cut(s) 2108, 2219, 2252, 2336, 2477, 2788
NlaIV GGNNCC 9 cut(s) 52, 53, 136, 445, 607, 1046, 2146, 2519, 2740
NmeAIII GCCGAG 1 cut(s) 2752
NmuCI GTSAC 4 cut(s) 1066, 1157, 1849, 1878
NsiI ATGCAT 1 cut(s) 2651
OliI CACNNNNGTG 1 cut(s) 2799
PasI CCCWGGG 1 cut(s) 2001
PdmI GAANNNNTTC 1 cut(s) 2119
PfeI GAWTC 3 cut(s) 1264, 1624, 2397
PflMI CCANNNNNTGG 9 cut(s) 275, 311, 425, 506, 602, 785, 1010, 1040, 2407
PinAI ACCGGT 1 cut(s) 1840
PkrI GCNGC 6 cut(s) 77, 922, 2131, 2317, 2413, 2845
PleI GAGTC 4 cut(s) 378, 1129, 1858, 2270
PluTI GGCGCC 1 cut(s) 2521
PpsI GAGTC 4 cut(s) 378, 1129, 1858, 2270
PpuMI RGGWCCY 1 cut(s) 51
PshAI GACNNNNGTC 1 cut(s) 1876
Psp5II RGGWCCY 1 cut(s) 51
Psp6I CCWGG 3 cut(s) 571, 2000, 2431
PspFI CCCAGC 3 cut(s) 105, 499, 778
PspGI CCWGG 3 cut(s) 571, 2000, 2431
PspN4I GGNNCC 9 cut(s) 52, 53, 136, 445, 607, 1046, 2146, 2519, 2740
PspPI GGNCC 4 cut(s) 51, 606, 1045, 1205
PspPPI RGGWCCY 1 cut(s) 51
PstNI CAGNNNCTG 2 cut(s) 713, 1727
PsuI RGATCY 2 cut(s) 710, 2144
RseI CAYNNNNRTG 3 cut(s) 2109, 2478, 2799
SaqAI TTAA 7 cut(s) 1311, 1557, 2199, 2210, 2490, 2610, 2643
SatI GCNGC 6 cut(s) 76, 921, 2130, 2316, 2412, 2844
Sau3AI GATC 6 cut(s) 710, 746, 1890, 2144, 2254, 2524
Sau96I GGNCC 4 cut(s) 51, 606, 1045, 1205
ScaI AGTACT 3 cut(s) 640, 664, 1660
SchI GAGTC 4 cut(s) 379, 1130, 1858, 2270
ScrFI CCNGG 4 cut(s) 573, 1532, 2002, 2433
SfaNI GCATC 6 cut(s) 266, 326, 1463, 2658, 2700, 2830
SfcI CTRYAG 1 cut(s) 522
SfoI GGCGCC 1 cut(s) 2519
SinI GGWCC 2 cut(s) 51, 1205
SmiI ATTTAAAT 1 cut(s) 2211
SmiMI CAYNNNNRTG 3 cut(s) 2109, 2478, 2799
SmlI CTYRAG 1 cut(s) 2528
SmoI CTYRAG 1 cut(s) 2528
Sse9I AATT 9 cut(s) 914, 1115, 1166, 1187, 1438, 1558, 1803, 2118, 2319
SsiI CCGC 4 cut(s) 348, 920, 1826, 2411
SspDI GGCGCC 1 cut(s) 2517
SspMI CTAG 2 cut(s) 795, 1767
StyD4I CCNGG 4 cut(s) 571, 1530, 2000, 2431
StyI CCWWGG 2 cut(s) 586, 1977
SwaI ATTTAAAT 1 cut(s) 2211
TaaI ACNGT 6 cut(s) 1246, 1413, 1509, 1590, 2043, 2573
TaiI ACGT 4 cut(s) 329, 1484, 1751, 2783
TaqI TCGA 3 cut(s) 368, 1870, 2652
TasI AATT 9 cut(s) 914, 1115, 1166, 1187, 1438, 1558, 1803, 2118, 2319
TatI WGTACW 7 cut(s) 632, 638, 662, 1246, 1658, 2245, 2805
TauI GCSGC 2 cut(s) 923, 2414
TfiI GAWTC 3 cut(s) 1264, 1624, 2397
Tru1I TTAA 7 cut(s) 1311, 1557, 2199, 2210, 2490, 2610, 2643
Tru9I TTAA 7 cut(s) 1311, 1557, 2199, 2210, 2490, 2610, 2643
TscAI CASTG 5 cut(s) 1024, 1954, 2048, 2085, 2806
TseFI GTSAC 4 cut(s) 1066, 1157, 1849, 1878
TseI GCWGC 4 cut(s) 75, 2129, 2315, 2843
Tsp45I GTSAC 4 cut(s) 1066, 1157, 1849, 1878
TspDTI ATGAA 9 cut(s) 204, 915, 1374, 1413, 1671, 1771, 1971, 2773, 2835
TspRI CASTG 5 cut(s) 1024, 1954, 2048, 2085, 2806
Van91I CCANNNNNTGG 9 cut(s) 275, 311, 425, 506, 602, 785, 1010, 1040, 2407
VneI GTGCAC 1 cut(s) 279
VpaK11BI GGWCC 2 cut(s) 51, 1205
XagI CCTNNNNNAGG 1 cut(s) 963
XapI RAATTY 1 cut(s) 2118
XcmI CCANNNNNNNNNTGG 2 cut(s) 62, 569
XmiI GTMKAC 3 cut(s) 290, 2282, 2675
XmnI GAANNNNTTC 1 cut(s) 2119
XspI CTAG 2 cut(s) 795, 1767
ZraI GACGTC 1 cut(s) 1749
ZrmI AGTACT 3 cut(s) 640, 664, 1660
Zsp2I ATGCAT 1 cut(s) 2651
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.