Nuclear pore complex protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G10390 AT1G10390 AT1G10390 |
| fragaria_vesca | FvH4_5g10240 |
| malus_domestica | MD06G1126200.v1.1 MD06G1126300.v1.1 MD14G1142000.v1.1 |
| prunus_persica | Prupe.5G135900_v2.0.a1 Prupe.5G135900_v2.0.a1 Prupe.5G136100_v2.0.a1 Prupe.5G136300_v2.0.a1 |
| pyrus_communis | pycom01g15820 pycom06g11640 pycom14g11750 |
| rosa_chinensis | RchiOBHm_Chr7g0187981 |
| rosa_laevigata | RLG00000004737 |
| rosa_multiflora | Rmu_ssc0000422.1_g000011 |
| rosa_roxburghii | Rroxscaffold_3G00266840 |
| rosa_rugosa | Rorug06G0486600 |
| rosa_samantha | Rh7AG091400 Rh7BG092900 Rh7CG092200 Rh7DG093600 |
| rosa_wichuraiana | Rw7G007880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 138 |
| Acc36I | ACCTGC | 3 cut(s) | 1954, 2068, 2134 |
| AccB1I | GGYRCC | 1 cut(s) | 1046 |
| AccI | GTMKAC | 1 cut(s) | 2052 |
| AciI | CCGC | 4 cut(s) | 633, 1213, 1499, 2113 |
| AclWI | GGATC | 3 cut(s) | 460, 790, 2151 |
| AcoI | YGGCCR | 1 cut(s) | 940 |
| AcsI | RAATTY | 2 cut(s) | 1878, 2031 |
| AfaI | GTAC | 4 cut(s) | 121, 388, 847, 1935 |
| AflIII | ACRYGT | 1 cut(s) | 153 |
| AhlI | ACTAGT | 2 cut(s) | 1142, 1460 |
| AjnI | CCWGG | 2 cut(s) | 859, 883 |
| Alw21I | GWGCWC | 3 cut(s) | 883, 1000, 1021 |
| Alw26I | GTCTC | 1 cut(s) | 1521 |
| AlwI | GGATC | 3 cut(s) | 460, 790, 2151 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 749, 1256 |
| AoxI | GGCC | 2 cut(s) | 940, 1072 |
| ApoI | RAATTY | 2 cut(s) | 1878, 2031 |
| AspLEI | GCGC | 3 cut(s) | 139, 188, 2065 |
| AspS9I | GGNCC | 4 cut(s) | 51, 354, 1072, 1247 |
| AsuC2I | CCSGG | 1 cut(s) | 815 |
| AsuHPI | GGTGA | 4 cut(s) | 195, 234, 285, 291 |
| AvaII | GGWCC | 3 cut(s) | 51, 354, 1247 |
| BaeGI | GKGCMC | 1 cut(s) | 1782 |
| BalI | TGGCCA | 1 cut(s) | 942 |
| BanI | GGYRCC | 1 cut(s) | 1046 |
| BanII | GRGCYC | 1 cut(s) | 1021 |
| Bbv12I | GWGCWC | 3 cut(s) | 883, 1000, 1021 |
| BccI | CCATC | 7 cut(s) | 304, 406, 916, 931, 1121, 1393, 1483 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2029, 2063 |
| BciT130I | CCWGG | 2 cut(s) | 861, 885 |
| BcnI | CCSGG | 1 cut(s) | 815 |
| BcoDI | GTCTC | 1 cut(s) | 1521 |
| BcuI | ACTAGT | 2 cut(s) | 1142, 1460 |
| BfaI | CTAG | 5 cut(s) | 36, 285, 831, 1143, 1461 |
| BfmI | CTRYAG | 2 cut(s) | 1488, 1926 |
| BfuAI | ACCTGC | 3 cut(s) | 1954, 2068, 2134 |
| Bme1390I | CCNGG | 3 cut(s) | 815, 861, 885 |
| Bme18I | GGWCC | 3 cut(s) | 51, 354, 1247 |
| BmgT120I | GGNCC | 4 cut(s) | 51, 354, 1072, 1247 |
| BmiI | GGNNCC | 8 cut(s) | 52, 53, 355, 433, 715, 1048, 1073, 2166 |
| BmrFI | CCNGG | 3 cut(s) | 815, 861, 885 |
| BmrI | ACTGGG | 1 cut(s) | 1146 |
| BmuI | ACTGGG | 1 cut(s) | 1146 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2101 |
| BpmI | CTGGAG | 2 cut(s) | 1542, 1596 |
| Bpu10I | CCTNAGC | 1 cut(s) | 105 |
| BpuEI | CTTGAG | 3 cut(s) | 177, 1311, 1318 |
| BpuMI | CCSGG | 1 cut(s) | 815 |
| Bsa29I | ATCGAT | 1 cut(s) | 2155 |
| BsaJI | CCNNGG | 2 cut(s) | 813, 2160 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 970, 1000, 1495, 1525 |
| Bse118I | RCCGGY | 1 cut(s) | 244 |
| Bse1I | ACTGG | 5 cut(s) | 178, 970, 1048, 1141, 1699 |
| Bse3DI | GCAATG | 2 cut(s) | 1182, 1983 |
| BseBI | CCWGG | 2 cut(s) | 861, 885 |
| BseCI | ATCGAT | 1 cut(s) | 2155 |
| BseDI | CCNNGG | 2 cut(s) | 813, 2160 |
| BseGI | GGATG | 1 cut(s) | 1385 |
| BseMI | GCAATG | 2 cut(s) | 1182, 1983 |
| BseMII | CTCAG | 2 cut(s) | 1805, 1814 |
| BseNI | ACTGG | 5 cut(s) | 178, 970, 1048, 1141, 1699 |
| BseSI | GKGCMC | 1 cut(s) | 1782 |
| BseYI | CCCAGC | 7 cut(s) | 487, 511, 607, 679, 703, 1151, 1215 |
| BsgI | GTGCAG | 2 cut(s) | 1296, 1995 |
| BshFI | GGCC | 2 cut(s) | 942, 1074 |
| BshNI | GGYRCC | 1 cut(s) | 1046 |
| BshVI | ATCGAT | 1 cut(s) | 2155 |
| BsiHKAI | GWGCWC | 3 cut(s) | 883, 1000, 1021 |
| BsiSI | CCGG | 2 cut(s) | 245, 815 |
| BslFI | GGGAC | 2 cut(s) | 37, 1153 |
| BsmAI | GTCTC | 1 cut(s) | 1521 |
| BsmBI | CGTCTC | 1 cut(s) | 1521 |
| BsmFI | GGGAC | 2 cut(s) | 37, 1153 |
| BsnI | GGCC | 2 cut(s) | 942, 1074 |
| Bsp1286I | GDGCHC | 4 cut(s) | 883, 1000, 1021, 1782 |
| Bsp1407I | TGTACA | 1 cut(s) | 1933 |
| Bsp143I | GATC | 5 cut(s) | 452, 782, 1710, 2152, 2156 |
| BspACI | CCGC | 4 cut(s) | 633, 1213, 1499, 2113 |
| BspANI | GGCC | 2 cut(s) | 942, 1074 |
| BspCNI | CTCAG | 2 cut(s) | 1804, 1813 |
| BspDI | ATCGAT | 1 cut(s) | 2155 |
| BspHI | TCATGA | 1 cut(s) | 1201 |
| BspLI | GGNNCC | 8 cut(s) | 52, 53, 355, 433, 715, 1048, 1073, 2166 |
| BspMAI | CTGCAG | 2 cut(s) | 1492, 1930 |
| BspMI | ACCTGC | 3 cut(s) | 1954, 2068, 2134 |
| BspPI | GGATC | 3 cut(s) | 460, 790, 2151 |
| BspT107I | GGYRCC | 1 cut(s) | 1046 |
| BsrDI | GCAATG | 2 cut(s) | 1182, 1983 |
| BsrFI | RCCGGY | 1 cut(s) | 244 |
| BsrGI | TGTACA | 1 cut(s) | 1933 |
| BsrI | ACTGG | 5 cut(s) | 178, 970, 1048, 1141, 1699 |
| BssAI | RCCGGY | 1 cut(s) | 244 |
| BssECI | CCNNGG | 2 cut(s) | 813, 2160 |
| BssMI | GATC | 5 cut(s) | 452, 782, 1710, 2152, 2156 |
| BssT1I | CCWWGG | 1 cut(s) | 2160 |
| Bst2UI | CCWGG | 2 cut(s) | 861, 885 |
| Bst4CI | ACNGT | 4 cut(s) | 30, 1826, 1905, 2016 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 473, 1109, 1181 |
| BstAUI | TGTACA | 1 cut(s) | 1933 |
| BstC8I | GCNNGC | 5 cut(s) | 267, 408, 465, 1182, 2042 |
| BstDEI | CTNAG | 4 cut(s) | 105, 1791, 1800, 2145 |
| BstEII | GGTNACC | 1 cut(s) | 2121 |
| BstF5I | GGATG | 1 cut(s) | 1385 |
| BstHHI | GCGC | 3 cut(s) | 139, 188, 2065 |
| BstKTI | GATC | 5 cut(s) | 455, 785, 1713, 2155, 2159 |
| BstMAI | GTCTC | 1 cut(s) | 1521 |
| BstMBI | GATC | 5 cut(s) | 452, 782, 1710, 2152, 2156 |
| BstNI | CCWGG | 2 cut(s) | 861, 885 |
| BstNSI | RCATGY | 2 cut(s) | 157, 2044 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2101 |
| BstPI | GGTNACC | 1 cut(s) | 2121 |
| BstSCI | CCNGG | 3 cut(s) | 813, 859, 883 |
| BstSFI | CTRYAG | 2 cut(s) | 1488, 1926 |
| BstSLI | GKGCMC | 1 cut(s) | 1782 |
| BstX2I | RGATCY | 1 cut(s) | 782 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1082, 1628 |
| BstYI | RGATCY | 1 cut(s) | 782 |
| Bsu15I | ATCGAT | 1 cut(s) | 2155 |
| BsuRI | GGCC | 2 cut(s) | 942, 1074 |
| BsuTUI | ATCGAT | 1 cut(s) | 2155 |
| BtsCI | GGATG | 1 cut(s) | 1385 |
| BtsI | GCAGTG | 1 cut(s) | 427 |
| BtsIMutI | CAGTG | 3 cut(s) | 427, 1041, 1134 |
| BveI | ACCTGC | 3 cut(s) | 1954, 2068, 2134 |
| Cac8I | GCNNGC | 5 cut(s) | 267, 408, 465, 1182, 2042 |
| CaiI | CAGNNNCTG | 2 cut(s) | 749, 1256 |
| CciI | TCATGA | 1 cut(s) | 1201 |
| CfoI | GCGC | 3 cut(s) | 139, 188, 2065 |
| Cfr10I | RCCGGY | 1 cut(s) | 244 |
| Cfr13I | GGNCC | 4 cut(s) | 51, 354, 1072, 1247 |
| ClaI | ATCGAT | 1 cut(s) | 2155 |
| CseI | GACGC | 2 cut(s) | 225, 885 |
| Csp6I | GTAC | 4 cut(s) | 120, 387, 846, 1934 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 208, 243, 427, 462 |
| CviAII | CATG | 3 cut(s) | 154, 1202, 2041 |
| CviQI | GTAC | 4 cut(s) | 120, 387, 846, 1934 |
| DdeI | CTNAG | 4 cut(s) | 105, 1791, 1800, 2145 |
| DpnI | GATC | 5 cut(s) | 454, 784, 1712, 2154, 2158 |
| DpnII | GATC | 5 cut(s) | 452, 782, 1710, 2152, 2156 |
| EaeI | YGGCCR | 1 cut(s) | 940 |
| Ecl136II | GAGCTC | 1 cut(s) | 1019 |
| Eco130I | CCWWGG | 1 cut(s) | 2160 |
| Eco24I | GRGCYC | 1 cut(s) | 1021 |
| Eco47I | GGWCC | 3 cut(s) | 51, 354, 1247 |
| Eco53kI | GAGCTC | 1 cut(s) | 1019 |
| Eco91I | GGTNACC | 1 cut(s) | 2121 |
| EcoICRI | GAGCTC | 1 cut(s) | 1019 |
| EcoO109I | RGGNCCY | 1 cut(s) | 51 |
| EcoO65I | GGTNACC | 1 cut(s) | 2121 |
| EcoRI | GAATTC | 1 cut(s) | 1878 |
| EcoRII | CCWGG | 2 cut(s) | 859, 883 |
| EcoT14I | CCWWGG | 1 cut(s) | 2160 |
| EcoT38I | GRGCYC | 1 cut(s) | 1021 |
| ErhI | CCWWGG | 1 cut(s) | 2160 |
| Esp3I | CGTCTC | 1 cut(s) | 1521 |
| FaeI | CATG | 3 cut(s) | 157, 1205, 2044 |
| FaqI | GGGAC | 2 cut(s) | 37, 1153 |
| FatI | CATG | 3 cut(s) | 153, 1201, 2040 |
| FauI | CCCGC | 3 cut(s) | 640, 1506, 2106 |
| FauNDI | CATATG | 1 cut(s) | 1105 |
| FblI | GTMKAC | 1 cut(s) | 2052 |
| FokI | GGATG | 1 cut(s) | 1372 |
| FriOI | GRGCYC | 1 cut(s) | 1021 |
| FspBI | CTAG | 5 cut(s) | 36, 285, 831, 1143, 1461 |
| FspI | TGCGCA | 1 cut(s) | 138 |
| GlaI | GCGC | 3 cut(s) | 138, 187, 2064 |
| GsaI | CCCAGC | 7 cut(s) | 491, 515, 611, 683, 707, 1155, 1219 |
| GsuI | CTGGAG | 2 cut(s) | 1542, 1596 |
| HaeIII | GGCC | 2 cut(s) | 942, 1074 |
| HapII | CCGG | 2 cut(s) | 245, 815 |
| HgaI | GACGC | 2 cut(s) | 225, 885 |
| HhaI | GCGC | 3 cut(s) | 139, 188, 2065 |
| Hin1II | CATG | 3 cut(s) | 157, 1205, 2044 |
| Hin6I | GCGC | 3 cut(s) | 137, 186, 2063 |
| HinP1I | GCGC | 3 cut(s) | 137, 186, 2063 |
| HincII | GTYRAC | 2 cut(s) | 1757, 2088 |
| HindII | GTYRAC | 2 cut(s) | 1757, 2088 |
| HindIII | AAGCTT | 1 cut(s) | 195 |
| HinfI | GANTC | 2 cut(s) | 1163, 1306 |
| HpaII | CCGG | 2 cut(s) | 245, 815 |
| HphI | GGTGA | 4 cut(s) | 195, 234, 285, 291 |
| Hpy166II | GTNNAC | 4 cut(s) | 975, 1757, 2053, 2088 |
| Hpy188I | TCNGA | 4 cut(s) | 330, 1767, 1803, 1890 |
| Hpy188III | TCNNGA | 3 cut(s) | 1118, 1202, 2094 |
| Hpy8I | GTNNAC | 4 cut(s) | 975, 1757, 2053, 2088 |
| HpyAV | CCTTC | 6 cut(s) | 222, 300, 1399, 1494, 1698, 1792 |
| HpyCH4III | ACNGT | 4 cut(s) | 30, 1826, 1905, 2016 |
| HpyCH4IV | ACGT | 2 cut(s) | 1081, 1580 |
| HpyF3I | CTNAG | 4 cut(s) | 105, 1791, 1800, 2145 |
| HpySE526I | ACGT | 2 cut(s) | 1081, 1580 |
| Hsp92II | CATG | 3 cut(s) | 157, 1205, 2044 |
| HspAI | GCGC | 3 cut(s) | 137, 186, 2063 |
| KflI | GGGWCCC | 1 cut(s) | 51 |
| Kzo9I | GATC | 5 cut(s) | 452, 782, 1710, 2152, 2156 |
| MaeI | CTAG | 5 cut(s) | 36, 285, 831, 1143, 1461 |
| MaeII | ACGT | 2 cut(s) | 1081, 1580 |
| MaeIII | GTNAC | 5 cut(s) | 149, 1682, 1905, 1912, 2121 |
| MalI | GATC | 5 cut(s) | 454, 784, 1712, 2154, 2158 |
| MboI | GATC | 5 cut(s) | 452, 782, 1710, 2152, 2156 |
| MboII | GAAGA | 3 cut(s) | 3, 192, 1217 |
| MfeI | CAATTG | 2 cut(s) | 1229, 1992 |
| MflI | RGATCY | 1 cut(s) | 782 |
| MhlI | GDGCHC | 4 cut(s) | 883, 1000, 1021, 1782 |
| MlsI | TGGCCA | 1 cut(s) | 942 |
| MluCI | AATT | 8 cut(s) | 1157, 1229, 1363, 1585, 1878, 1992, 2019, 2031 |
| MluNI | TGGCCA | 1 cut(s) | 942 |
| MlyI | GAGTC | 1 cut(s) | 1172 |
| MmeI | TCCRAC | 1 cut(s) | 1790 |
| Mox20I | TGGCCA | 1 cut(s) | 942 |
| MscI | TGGCCA | 1 cut(s) | 942 |
| MseI | TTAA | 6 cut(s) | 1344, 1584, 1706, 1815, 1830, 2070 |
| Msp20I | TGGCCA | 1 cut(s) | 942 |
| MspA1I | CMGCKG | 4 cut(s) | 1215, 1562, 1616, 1931 |
| MspI | CCGG | 2 cut(s) | 245, 815 |
| MspR9I | CCNGG | 3 cut(s) | 815, 861, 885 |
| MunI | CAATTG | 2 cut(s) | 1229, 1992 |
| MvaI | CCWGG | 2 cut(s) | 861, 885 |
| NciI | CCSGG | 1 cut(s) | 815 |
| NdeI | CATATG | 1 cut(s) | 1105 |
| NdeII | GATC | 5 cut(s) | 452, 782, 1710, 2152, 2156 |
| NlaIII | CATG | 3 cut(s) | 157, 1205, 2044 |
| NlaIV | GGNNCC | 8 cut(s) | 52, 53, 355, 433, 715, 1048, 1073, 2166 |
| NmuCI | GTSAC | 1 cut(s) | 1912 |
| NsbI | TGCGCA | 1 cut(s) | 138 |
| NspI | RCATGY | 2 cut(s) | 157, 2044 |
| PaeI | GCATGC | 1 cut(s) | 2044 |
| PagI | TCATGA | 1 cut(s) | 1201 |
| PciI | ACATGT | 1 cut(s) | 153 |
| PfeI | GAWTC | 1 cut(s) | 1306 |
| PleI | GAGTC | 1 cut(s) | 1171 |
| PpsI | GAGTC | 1 cut(s) | 1171 |
| PpuMI | RGGWCCY | 1 cut(s) | 51 |
| PscI | ACATGT | 1 cut(s) | 153 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2101 |
| Psp124BI | GAGCTC | 1 cut(s) | 1021 |
| Psp5II | RGGWCCY | 1 cut(s) | 51 |
| Psp6I | CCWGG | 2 cut(s) | 859, 883 |
| PspEI | GGTNACC | 1 cut(s) | 2121 |
| PspFI | CCCAGC | 7 cut(s) | 487, 511, 607, 679, 703, 1151, 1215 |
| PspGI | CCWGG | 2 cut(s) | 859, 883 |
| PspN4I | GGNNCC | 8 cut(s) | 52, 53, 355, 433, 715, 1048, 1073, 2166 |
| PspPI | GGNCC | 4 cut(s) | 51, 354, 1072, 1247 |
| PspPPI | RGGWCCY | 1 cut(s) | 51 |
| PstI | CTGCAG | 2 cut(s) | 1492, 1930 |
| PstNI | CAGNNNCTG | 2 cut(s) | 749, 1256 |
| PsuI | RGATCY | 1 cut(s) | 782 |
| PvuII | CAGCTG | 3 cut(s) | 1562, 1616, 1931 |
| RsaI | GTAC | 4 cut(s) | 121, 388, 847, 1935 |
| RsaNI | GTAC | 4 cut(s) | 120, 387, 846, 1934 |
| SacI | GAGCTC | 1 cut(s) | 1021 |
| SaqAI | TTAA | 6 cut(s) | 1344, 1584, 1706, 1815, 1830, 2070 |
| Sau3AI | GATC | 5 cut(s) | 452, 782, 1710, 2152, 2156 |
| Sau96I | GGNCC | 4 cut(s) | 51, 354, 1072, 1247 |
| SchI | GAGTC | 1 cut(s) | 1172 |
| ScrFI | CCNGG | 3 cut(s) | 815, 861, 885 |
| SduI | GDGCHC | 4 cut(s) | 883, 1000, 1021, 1782 |
| SfcI | CTRYAG | 2 cut(s) | 1488, 1926 |
| SinI | GGWCC | 3 cut(s) | 51, 354, 1247 |
| SmlI | CTYRAG | 3 cut(s) | 192, 1326, 1333 |
| SmoI | CTYRAG | 3 cut(s) | 192, 1326, 1333 |
| SpeI | ACTAGT | 2 cut(s) | 1142, 1460 |
| SphI | GCATGC | 1 cut(s) | 2044 |
| Sse9I | AATT | 8 cut(s) | 1157, 1229, 1363, 1585, 1878, 1992, 2019, 2031 |
| SsiI | CCGC | 4 cut(s) | 633, 1213, 1499, 2113 |
| SspMI | CTAG | 5 cut(s) | 36, 285, 831, 1143, 1461 |
| SstI | GAGCTC | 1 cut(s) | 1021 |
| StyD4I | CCNGG | 3 cut(s) | 813, 859, 883 |
| StyI | CCWWGG | 1 cut(s) | 2160 |
| TaaI | ACNGT | 4 cut(s) | 30, 1826, 1905, 2016 |
| TaiI | ACGT | 2 cut(s) | 1084, 1583 |
| TaqI | TCGA | 4 cut(s) | 764, 836, 2095, 2155 |
| TasI | AATT | 8 cut(s) | 1157, 1229, 1363, 1585, 1878, 1992, 2019, 2031 |
| TatI | WGTACW | 3 cut(s) | 119, 386, 1933 |
| TfiI | GAWTC | 1 cut(s) | 1306 |
| Tru1I | TTAA | 6 cut(s) | 1344, 1584, 1706, 1815, 1830, 2070 |
| Tru9I | TTAA | 6 cut(s) | 1344, 1584, 1706, 1815, 1830, 2070 |
| TscAI | CASTG | 3 cut(s) | 427, 1048, 1141 |
| TseFI | GTSAC | 1 cut(s) | 1912 |
| Tsp45I | GTSAC | 1 cut(s) | 1912 |
| TspDTI | ATGAA | 7 cut(s) | 303, 816, 972, 1218, 1347, 1422, 1536 |
| TspGWI | ACGGA | 2 cut(s) | 999, 1503 |
| TspRI | CASTG | 3 cut(s) | 427, 1048, 1141 |
| VpaK11BI | GGWCC | 3 cut(s) | 51, 354, 1247 |
| XapI | RAATTY | 2 cut(s) | 1878, 2031 |
| XceI | RCATGY | 2 cut(s) | 157, 2044 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 62 |
| XmiI | GTMKAC | 1 cut(s) | 2052 |
| XspI | CTAG | 5 cut(s) | 36, 285, 831, 1143, 1461 |