FvH4_5g10240

Nuclear pore complex protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
5848702 .. 5854956
6255 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g10240.t1

Sequence Viewer

Length: 3099 bp
ATGTTTGGTGCTTCTTCCAGCCCTTTTGGGCAGTCATCTAACAGCCCGTTTGGGTCCCAATCGGTGTTTGGGCAAAGCAGCAACACAAGTAACAATCCTTTTTCTCCCCAGCCCTTTGGTAGCACCAACACATTTGGTGCCCAAACAGGGAGTTCTTTATTTGGTGGAACTTCAACTGGCGTATTTGGTCAAACCCAATCCTCGCCTTTTGGTGCTTCATCTTCGCCAGCTTTTGGACAGCAGAGTTCTCCATTTGGAGCAGCTTCTACTCCAGCATTCGGTGCGTCGTCTACTCAAACAAGTCCATTTGGTGGACCATCCAGTACGTCTGTTTTTGGTCAGAAGCCTGCTTTTGGAGCATTTGGGTCGAGTCCTGCTCAAACAAGTCTATTTGGGAGCACAGCTCAACCATCACAACCAGCATTCGGAAGCAATATGTTTGGTAACACCTCTTCACCATTTGGTGGAAGTCAGCCTGCATTTGGAACTAATACTACCCCAGCCTTTGGTTCAACAAACACCACGGCCTTTGGTTCAACAAATACCTCAGCCTTTGGTGCCACCACCAACCCTGCTTTTGGTGGCCAAGCCACTCCAGCCTTTGGGGCCACAAGCGCTTCGCCTTTTGGTGGTACAAGTACTCCGGCCTTTGGTGCACCAAGTACTCCCACCTTTGGCTCAACACCAAGTCCTGCATTTGGAAGCACAGGATCTGCATTTGGGACAACAAGTCCCAGCTTGTTTGGAACTGGGGGAGCATTTGGGGCAACTCCAAGCACCCCGTCTTTTGGTCAATCTAGCCCAGCTTTTGGTACTACAACAAGTGCTCCTGCTTTTGGCCAATCAAGCACAGGTTTTGGCTTTTCATCAAGTACTCCTGCATTTGGCCAATCAAGTTCAACCTTTGGTAGCACCCAATTTGGTGCTTCATCTCCTTTTGGAGGGCAGAGTTCTTCATTTGGGGTTCAGTCAACAACACCAACACTTGGAAACAATGCCTTTGGACAGTCAACTTTTGGGGCCCAACGGGGTGGAAGTAGAGCGACTCCTTACACAGGCACATCTGAACCAGATAGTAATGGACTGGGGAAATTGGAGTCAATTTCAGCAATGCCAGCCTATAAAGAAAAAAGTCACGAGGAATTGAGATGGGAGGATTACCAATTAGGGGATAAAGGTGGACCGTCTCCTGCTGCCGGGGGTGGCTTTGGCACGTCAACTGTACAGACAAATCCTTTGAATCCTAATCCTGCAACACCATTTGGTCAAACATCTTCAAATCCTTTCAATAATTCAACCTCATCTAGTTTATTTGCTCCAAAAACCTCATCCTTCCCTTCTGCTGGTTTTGGTGTCACTTCATCTTCACCATTTAGTTCGTCTTCACCGTTTAGTTCGTCGTCACCATTTAGTTCTTCTTCGCCGTTTAGTTCATCAACTCAAGGCAATTTGTTTACACCTGCATCATCAGCCCCAGCATTTGGCCAAACAGCTCCAGCATTTGGCTCTTCCCCATCATTTGGCCAAACATCGTCTCCGTCACCTTTTAGTTCACCGTCATCCTTCTCATTCTCTACTGCGGCCACATCATCCACTCCCTCATTCAATTTCCCCACTCCTTCAAACCCGCAGACACAATTTGGTCAAACAGGCACTGCCGCATTTGGGCAGAATTCATCTCCCTTTAGTTCAAACTTGTTCAGTAATACGTCCAGCTTGCAGAGCAGTTCATTGGGGACTACAACTAACCAACTTGGTAATACTCAACCAGCTCCTGCTTTTCCTAATTTCCAGACATCTCAGCCTTCTCAGAGTAGTCCTTTTGGCTTCAACAACACCAGCACTTTTGGTCAACAACAGCCAGGCAATACAGGCTTTGGTGGTTTAGCAGGCATTTCTGGTCAGAGCAACTTTGGACAATTGTCTGTGGCTCAAGGCTATGCAGGTGTACAACAACCAGTACCTGCTACAAATCCATTTGGAACACTCCCCGCGATGCCTCAGATGTCAATTGGTCGTGGGGGAACTGCACCCTCGATTCAATATGGAATTTCAAGCATGCCTGTTGTGGATAAACCTGCTCCTGTTAGGGTGACATCCATCTTGACTCCTCGACACCTGTCACAACGCCGGATCAGATTACCTGCAAGAAAATATAATCCTAAAAATGATAACCCAAAGGCTTTTTTTAGTGATGATGAAGAAACGCCCACAACACCCAAGGGTGATGTTGTTTTCCATCCCAGGGAAAACCCAAGAGCGCTTGTCATTCGTCCACGAGAACAACAGTGGCCTCTAAGAGCGAGTGCTGAGAAAACAACAGCACTGAAGAATACAACTACTCCAATCCATGAGAACGGAGAGAGTTCGGGAGCACCACTCTTTGTGGGATCCAACTCTGAGGATAAAGACGAAACTCTGCAAGAAAATGGTGCTGTGAAGGATCATTTAAATCATGTCAAAGCTAATCAGAAACCTAATGGAGTACATGATGATCGCGCCCTTGAGAAAGGGGACTCGTATACAACACTAAGTGGGCACAGAGCTGGTGAGGCTGCTATTGTATATGAGCATGGTGCTGACATTGAGGCACAAATGCCGAAGCTCCGACGCTCTGATTACTACACAGAGCCAAGAATCCAAGAACTCGCGGCAAAGGAAAGGGCAGAGCCAGGGTTCTGCCGTCGTGTGAAGGACTTTGTGGTTGGGCGACATGGTTATGGTAGCATAAAGTTCTTGGGGGAGACAGATGTAAGGCGCCTTGATCTTGAGGCTCTGGTGCAGTTCAACAATAAGGAGGTAATTGTGTACCGTGATGAGAACAAGAAACCTCCTGTTGGGCAAGGCCTTAATAAACCTGCTGTGGTTACACTTCTCAACATTAAATGCATTGAGAAGAAGACTGGCACTCAGTATACAGAAGGACCAAAAGTTGAGAAATACAAGGAGATGCTGAAGAAGAAGGCTGAGGAACAAGGTGCCAAGTTTGTCTCCTACGACCCTAAGAAGGAAGAGTGGACGTTCATGGTCGACCACTTCAGTGAGTACAATCTGAAAGACGAAGACGACTGGGATGTGGATGCTGCCCCAGATTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000972 GO:0000973 GO:0003674 GO:0003676 GO:0003682 GO:0003712 GO:0003713 GO:0003723 GO:0003729 GO:0005048 GO:0005198 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0006999 GO:0008104 GO:0008139 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016032 GO:0016043 GO:0016234 GO:0016604 GO:0017038 GO:0017056 GO:0019219 GO:0019222 GO:0022607 GO:0031080 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031503 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033120 GO:0033218 GO:0033365 GO:0034397 GO:0034398 GO:0034399 GO:0034504 GO:0034613 GO:0034622 GO:0034641 GO:0034645 GO:0042277 GO:0042405 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044614 GO:0044615 GO:0045184 GO:0045935 GO:0046483 GO:0046907 GO:0046931 GO:0048024 GO:0048026 GO:0048518 GO:0048522 GO:0048583 GO:0050000 GO:0050657 GO:0050658 GO:0050684 GO:0050685 GO:0050789 GO:0050794 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051254 GO:0051276 GO:0051292 GO:0051640 GO:0051641 GO:0051649 GO:0051704 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1902446 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903508 GO:1990841 GO:1990904 GO:2000030 GO:2001141
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1033

Amino Acids

106.93

Weight (kDa)

7.19

Isoelectric Point (pI)

59.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nup98_GLEBS PF21240 368 - 387 4.2e-06 Nup98, Gle2-binding sequence
Nucleoporin2 PF04096 872 - 1018 1.2e-44 Nup98-96 autopeptidase S59
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1468, 1934
Acc36I ACCTGC 6 cut(s) 1468, 1934, 1972, 2086, 2152, 2866
AccB1I GGYRCC 4 cut(s) 137, 557, 2757, 2978
AccI GTMKAC 4 cut(s) 290, 2522, 2915, 3030
AccII CGCG 3 cut(s) 1994, 2499, 2651
AciI CCGC 5 cut(s) 1580, 1628, 1659, 1992, 2651
AclWI GGATC 5 cut(s) 718, 2141, 2385, 2398, 2451
AcoI YGGCCR 6 cut(s) 583, 838, 886, 1483, 1522, 1581
AcsI RAATTY 2 cut(s) 1672, 2049
AcuI CTGAAG 3 cut(s) 2348, 2975, 3022
AcyI GRCGYC 1 cut(s) 2758
AdeI CACNNNGTG 1 cut(s) 2534
AfeI AGCGCT 2 cut(s) 616, 2262
AhdI GACNNNNNGTC 1 cut(s) 729
AjiI CACGTC 1 cut(s) 1215
AjnI CCWGG 3 cut(s) 1861, 2243, 2671
AleI CACNNNNGTG 1 cut(s) 3039
Alw21I GWGCWC 4 cut(s) 401, 658, 829, 2377
Alw26I GTCTC 4 cut(s) 1191, 1539, 2738, 2995
Alw44I GTGCAC 1 cut(s) 654
AlwI GGATC 5 cut(s) 718, 2141, 2385, 2398, 2451
AlwNI CAGNNNCTG 4 cut(s) 713, 1655, 1775, 1964
Aor51HI AGCGCT 2 cut(s) 616, 2262
ApaI GGGCCC 1 cut(s) 1024
ApaLI GTGCAC 1 cut(s) 654
ApeKI GCWGC 5 cut(s) 78, 260, 1193, 2555, 3083
ApoI RAATTY 2 cut(s) 1672, 2049
ArsI GACNNNNNNTTYG 2 cut(s) 1219, 1251
AspLEI GCGC 4 cut(s) 617, 2263, 2501, 2760
AspS9I GGNCC 7 cut(s) 54, 314, 606, 1020, 1021, 1181, 2924
AsuC2I CCSGG 1 cut(s) 1198
AsuHPI GGTGA 9 cut(s) 447, 1359, 1377, 1395, 1533, 1545, 2104, 2237, 2561
AvaII GGWCC 4 cut(s) 54, 314, 1181, 2924
BaeGI GKGCMC 4 cut(s) 142, 658, 1024, 2541
BalI TGGCCA 5 cut(s) 585, 840, 888, 1485, 1524
BamHI GGATCC 1 cut(s) 2390
BanI GGYRCC 4 cut(s) 137, 557, 2757, 2978
BanII GRGCYC 1 cut(s) 1024
BarI GAAGNNNNNNTAC 2 cut(s) 436, 468
BauI CACGAG 2 cut(s) 1136, 2277
BbsI GAAGAC 3 cut(s) 1374, 2906, 3069
Bbv12I GWGCWC 4 cut(s) 401, 658, 829, 2377
BbvCI CCTCAGC 2 cut(s) 547, 2967
BbvI GCAGC 5 cut(s) 90, 272, 1180, 2542, 3070
BccI CCATC 6 cut(s) 325, 418, 1143, 1522, 2108, 2247
BceAI ACGGC 3 cut(s) 540, 1408, 2667
BcgI CGANNNNNNTGC 2 cut(s) 348, 382
BciT130I CCWGG 3 cut(s) 1863, 2245, 2673
BcnI CCSGG 1 cut(s) 1198
BcoDI GTCTC 4 cut(s) 1191, 1539, 2738, 2995
BfaI CTAG 2 cut(s) 798, 1305
BfoI RGCGCY 3 cut(s) 618, 2264, 2761
BfuAI ACCTGC 6 cut(s) 1468, 1934, 1972, 2086, 2152, 2866
BglI GCCNNNNNGGC 1 cut(s) 605
BisI GCNGC 8 cut(s) 79, 261, 1194, 1581, 1659, 2556, 2652, 3084
BlsI GCNGC 8 cut(s) 80, 262, 1195, 1582, 1660, 2557, 2653, 3085
BmcAI AGTACT 3 cut(s) 640, 664, 874
Bme1390I CCNGG 4 cut(s) 1198, 1863, 2245, 2673
Bme18I GGWCC 4 cut(s) 54, 314, 1181, 2924
BmeRI GACNNNNNGTC 1 cut(s) 729
BmgBI CACGTC 1 cut(s) 1215
BmgT120I GGNCC 7 cut(s) 54, 314, 606, 1020, 1021, 1181, 2924
BmrFI CCNGG 4 cut(s) 1198, 1863, 2245, 2673
BmrI ACTGGG 3 cut(s) 759, 1094, 3079
BmsI GCATC 4 cut(s) 1472, 1986, 2940, 3070
BmuI ACTGGG 3 cut(s) 759, 1094, 3079
BoxI GACNNNNGTC 2 cut(s) 1921, 2119
BpiI GAAGAC 3 cut(s) 1374, 2906, 3069
BplI GAGNNNNNCTC 6 cut(s) 361, 393, 388, 420, 2364, 2396
BpmI CTGGAG 3 cut(s) 255, 579, 1479
Bpu10I CCTNAGC 2 cut(s) 547, 2967
BpuEI CTTGAG 4 cut(s) 1425, 1917, 2525, 2789
BpuMI CCSGG 1 cut(s) 1198
BsaHI GRCGYC 1 cut(s) 2758
BsaJI CCNNGG 6 cut(s) 522, 1197, 2220, 2243, 2244, 2672
BsaXI ACNNNNNCTCC 8 cut(s) 625, 655, 811, 841, 1519, 1549, 2326, 2356
Bse1I ACTGG 7 cut(s) 181, 321, 754, 1089, 1958, 2908, 3074
Bse3DI GCAATG 1 cut(s) 1116
BseBI CCWGG 3 cut(s) 1863, 2245, 2673
BseDI CCNNGG 6 cut(s) 522, 1197, 2220, 2243, 2244, 2672
BseGI GGATG 8 cut(s) 317, 1328, 1559, 1589, 2096, 2239, 3079, 3085
BseMI GCAATG 1 cut(s) 1116
BseMII CTCAG 8 cut(s) 561, 1814, 1823, 2015, 2301, 2391, 2924, 2958
BseNI ACTGG 7 cut(s) 181, 321, 754, 1089, 1958, 2908, 3074
BseRI GAGGAG 1 cut(s) 2100
BseSI GKGCMC 4 cut(s) 142, 658, 1024, 2541
BseXI GCAGC 5 cut(s) 90, 272, 1180, 2542, 3070
BseYI CCCAGC 5 cut(s) 108, 499, 734, 802, 1474
BsgI GTGCAG 2 cut(s) 2013, 2801
Bsh1236I CGCG 3 cut(s) 1994, 2499, 2651
BshNI GGYRCC 4 cut(s) 137, 557, 2757, 2978
BsiHKAI GWGCWC 4 cut(s) 401, 658, 829, 2377
BsiSI CCGG 3 cut(s) 644, 1197, 2131
BslFI GGGAC 5 cut(s) 40, 717, 736, 1750, 2528
BsmAI GTCTC 4 cut(s) 1191, 1539, 2738, 2995
BsmBI CGTCTC 2 cut(s) 1191, 1539
BsmFI GGGAC 5 cut(s) 40, 717, 736, 1750, 2528
BsmI GAATGC 2 cut(s) 275, 422
Bsp120I GGGCCC 1 cut(s) 1020
Bsp1286I GDGCHC 7 cut(s) 142, 401, 658, 829, 1024, 2377, 2541
Bsp1407I TGTACA 2 cut(s) 1222, 1948
Bsp143I GATC 6 cut(s) 710, 2133, 2390, 2443, 2494, 2764
BspACI CCGC 5 cut(s) 1580, 1628, 1659, 1992, 2651
BspCNI CTCAG 8 cut(s) 560, 1813, 1822, 2014, 2302, 2392, 2923, 2959
BspFNI CGCG 3 cut(s) 1994, 2499, 2651
BspMI ACCTGC 6 cut(s) 1468, 1934, 1972, 2086, 2152, 2866
BspPI GGATC 5 cut(s) 718, 2141, 2385, 2398, 2451
BspQI GCTCTTC 1 cut(s) 1513
BspT107I GGYRCC 4 cut(s) 137, 557, 2757, 2978
BsrDI GCAATG 1 cut(s) 1116
BsrGI TGTACA 2 cut(s) 1222, 1948
BsrI ACTGG 7 cut(s) 181, 321, 754, 1089, 1958, 2908, 3074
BssECI CCNNGG 6 cut(s) 522, 1197, 2220, 2243, 2244, 2672
BssMI GATC 6 cut(s) 710, 2133, 2390, 2443, 2494, 2764
BssNAI GTATAC 2 cut(s) 2523, 2916
BssNI GRCGYC 1 cut(s) 2758
BssSI CACGAG 2 cut(s) 1136, 2277
BssT1I CCWWGG 1 cut(s) 2220
Bst1107I GTATAC 2 cut(s) 2523, 2916
Bst2BI CACGAG 2 cut(s) 1136, 2277
Bst2UI CCWGG 3 cut(s) 1863, 2245, 2673
Bst4CI ACNGT 7 cut(s) 1008, 1185, 1222, 1389, 1557, 2289, 2813
Bst6I CTCTTC 3 cut(s) 457, 1513, 3006
BstACI GRCGYC 1 cut(s) 2758
BstAPI GCANNNNNTGC 1 cut(s) 281
BstAUI TGTACA 2 cut(s) 1222, 1948
BstC8I GCNNGC 7 cut(s) 228, 348, 477, 1116, 1718, 1891, 2060
BstDSI CCRYGG 1 cut(s) 522
BstENI CCTNNNNNAGG 2 cut(s) 939, 1053
BstF5I GGATG 8 cut(s) 317, 1328, 1559, 1589, 2096, 2239, 3079, 3085
BstFNI CGCG 3 cut(s) 1994, 2499, 2651
BstH2I RGCGCY 3 cut(s) 618, 2264, 2761
BstHHI GCGC 4 cut(s) 617, 2263, 2501, 2760
BstKTI GATC 6 cut(s) 713, 2136, 2393, 2446, 2497, 2767
BstMAI GTCTC 4 cut(s) 1191, 1539, 2738, 2995
BstMBI GATC 6 cut(s) 710, 2133, 2390, 2443, 2494, 2764
BstNI CCWGG 3 cut(s) 1863, 2245, 2673
BstNSI RCATGY 1 cut(s) 2062
BstPAI GACNNNNGTC 2 cut(s) 1921, 2119
BstSCI CCNGG 4 cut(s) 1196, 1861, 2243, 2671
BstSLI GKGCMC 4 cut(s) 142, 658, 1024, 2541
BstUI CGCG 3 cut(s) 1994, 2499, 2651
BstV1I GCAGC 5 cut(s) 90, 272, 1180, 2542, 3070
BstV2I GAAGAC 3 cut(s) 1374, 2906, 3069
BstX2I RGATCY 2 cut(s) 710, 2390
BstXI CCANNNNNNTGG 2 cut(s) 116, 1031
BstYI RGATCY 2 cut(s) 710, 2390
BstZ17I GTATAC 2 cut(s) 2523, 2916
BtgI CCRYGG 1 cut(s) 522
BtgZI GCGATG 1 cut(s) 2009
BtrI CACGTC 1 cut(s) 1215
BtsCI GGATG 8 cut(s) 317, 1328, 1559, 1589, 2096, 2239, 3079, 3085
BtsI GCAGTG 1 cut(s) 1653
BtsIMutI CAGTG 4 cut(s) 1653, 2294, 2324, 3046
BveI ACCTGC 6 cut(s) 1468, 1934, 1972, 2086, 2152, 2866
Cac8I GCNNGC 7 cut(s) 228, 348, 477, 1116, 1718, 1891, 2060
CaiI CAGNNNCTG 4 cut(s) 713, 1655, 1775, 1964
CfoI GCGC 4 cut(s) 617, 2263, 2501, 2760
Cfr13I GGNCC 7 cut(s) 54, 314, 606, 1020, 1021, 1181, 2924
CseI GACGC 2 cut(s) 273, 2619
CspCI CAANNNNNGTGG 2 cut(s) 511, 546
CviAII CATG 7 cut(s) 2059, 2351, 2456, 2489, 2573, 2714, 3025
DinI GGCGCC 1 cut(s) 2759
DpnI GATC 6 cut(s) 712, 2135, 2392, 2445, 2496, 2766
DpnII GATC 6 cut(s) 710, 2133, 2390, 2443, 2494, 2764
DraI TTTAAA 1 cut(s) 2451
DraIII CACNNNGTG 1 cut(s) 2534
DriI GACNNNNNGTC 1 cut(s) 729
EaeI YGGCCR 6 cut(s) 583, 838, 886, 1483, 1522, 1581
Eam1104I CTCTTC 3 cut(s) 457, 1513, 3006
Eam1105I GACNNNNNGTC 1 cut(s) 729
EarI CTCTTC 3 cut(s) 457, 1513, 3006
Eco130I CCWWGG 1 cut(s) 2220
Eco147I AGGCCT 1 cut(s) 2847
Eco24I GRGCYC 1 cut(s) 1024
Eco47I GGWCC 4 cut(s) 54, 314, 1181, 2924
Eco47III AGCGCT 2 cut(s) 616, 2262
Eco57I CTGAAG 3 cut(s) 2348, 2975, 3022
EcoNI CCTNNNNNAGG 2 cut(s) 939, 1053
EcoO109I RGGNCCY 2 cut(s) 54, 1020
EcoRI GAATTC 1 cut(s) 1672
EcoRII CCWGG 3 cut(s) 1861, 2243, 2671
EcoT14I CCWWGG 1 cut(s) 2220
EcoT22I ATGCAT 1 cut(s) 2891
EcoT38I GRGCYC 1 cut(s) 1024
EgeI GGCGCC 1 cut(s) 2759
EheI GGCGCC 1 cut(s) 2759
ErhI CCWWGG 1 cut(s) 2220
Esp3I CGTCTC 2 cut(s) 1191, 1539
FaeI CATG 7 cut(s) 2062, 2354, 2459, 2492, 2576, 2717, 3028
FaqI GGGAC 5 cut(s) 40, 717, 736, 1750, 2528
FatI CATG 7 cut(s) 2058, 2350, 2455, 2488, 2572, 2713, 3024
FauI CCCGC 2 cut(s) 1635, 1999
FblI GTMKAC 4 cut(s) 290, 2522, 2915, 3030
Fnu4HI GCNGC 8 cut(s) 79, 261, 1194, 1581, 1659, 2556, 2652, 3084
FokI GGATG 8 cut(s) 304, 1315, 1546, 1576, 2083, 2226, 3086, 3092
FriOI GRGCYC 1 cut(s) 1024
Fsp4HI GCNGC 8 cut(s) 79, 261, 1194, 1581, 1659, 2556, 2652, 3084
FspBI CTAG 2 cut(s) 798, 1305
GlaI GCGC 4 cut(s) 616, 2262, 2500, 2759
GluI GCNGC 8 cut(s) 79, 261, 1194, 1581, 1659, 2556, 2652, 3084
GsaI CCCAGC 5 cut(s) 112, 503, 738, 806, 1478
GsuI CTGGAG 3 cut(s) 255, 579, 1479
HaeII RGCGCY 3 cut(s) 618, 2264, 2761
HapII CCGG 3 cut(s) 644, 1197, 2131
HgaI GACGC 2 cut(s) 273, 2619
HhaI GCGC 4 cut(s) 617, 2263, 2501, 2760
Hin1I GRCGYC 1 cut(s) 2758
Hin1II CATG 7 cut(s) 2062, 2354, 2459, 2492, 2576, 2717, 3028
Hin6I GCGC 4 cut(s) 615, 2261, 2499, 2758
HinP1I GCGC 4 cut(s) 615, 2261, 2499, 2758
HincII GTYRAC 5 cut(s) 972, 1011, 1218, 1853, 3031
HindII GTYRAC 5 cut(s) 972, 1011, 1218, 1853, 3031
HinfI GANTC 8 cut(s) 370, 1045, 1097, 1240, 2038, 2107, 2516, 2637
HpaII CCGG 3 cut(s) 644, 1197, 2131
HphI GGTGA 9 cut(s) 447, 1359, 1377, 1395, 1533, 1545, 2104, 2237, 2561
Hpy188III TCNNGA 5 cut(s) 1136, 1792, 2104, 2370, 2768
Hpy99I CGWCG 4 cut(s) 289, 1402, 2613, 2688
HpyCH4III ACNGT 7 cut(s) 1008, 1185, 1222, 1389, 1557, 2289, 2813
HpyCH4IV ACGT 4 cut(s) 326, 1214, 1709, 3020
HpySE526I ACGT 4 cut(s) 326, 1214, 1709, 3020
Hsp92I GRCGYC 1 cut(s) 2758
Hsp92II CATG 7 cut(s) 2062, 2354, 2459, 2492, 2576, 2717, 3028
HspAI GCGC 4 cut(s) 615, 2261, 2499, 2758
KasI GGCGCC 1 cut(s) 2757
KflI GGGWCCC 1 cut(s) 54
Kzo9I GATC 6 cut(s) 710, 2133, 2390, 2443, 2494, 2764
LguI GCTCTTC 1 cut(s) 1513
Lsp1109I GCAGC 5 cut(s) 90, 272, 1180, 2542, 3070
LweI GCATC 4 cut(s) 1472, 1986, 2940, 3070
MaeI CTAG 2 cut(s) 798, 1305
MaeII ACGT 4 cut(s) 326, 1214, 1709, 3020
MaeIII GTNAC 9 cut(s) 89, 443, 1133, 1354, 1401, 1539, 2092, 2121, 2866
MalI GATC 6 cut(s) 712, 2135, 2392, 2445, 2496, 2766
MboI GATC 6 cut(s) 710, 2133, 2390, 2443, 2494, 2764
MfeI CAATTG 2 cut(s) 1919, 2010
MflI RGATCY 2 cut(s) 710, 2390
MhlI GDGCHC 7 cut(s) 142, 401, 658, 829, 1024, 2377, 2541
MlsI TGGCCA 5 cut(s) 585, 840, 888, 1485, 1524
MluNI TGGCCA 5 cut(s) 585, 840, 888, 1485, 1524
Mly113I GGCGCC 1 cut(s) 2758
MlyI GAGTC 5 cut(s) 379, 1039, 1106, 2101, 2510
MmeI TCCRAC 2 cut(s) 2418, 2632
Mox20I TGGCCA 5 cut(s) 585, 840, 888, 1485, 1524
Mph1103I ATGCAT 1 cut(s) 2891
MscI TGGCCA 5 cut(s) 585, 840, 888, 1485, 1524
MseI TTAA 3 cut(s) 2450, 2850, 2883
MslI CAYNNNNRTG 2 cut(s) 2718, 3039
Msp20I TGGCCA 5 cut(s) 585, 840, 888, 1485, 1524
MspI CCGG 3 cut(s) 644, 1197, 2131
MspR9I CCNGG 4 cut(s) 1198, 1863, 2245, 2673
MunI CAATTG 2 cut(s) 1919, 2010
Mva1269I GAATGC 2 cut(s) 275, 422
MvaI CCWGG 3 cut(s) 1863, 2245, 2673
MvnI CGCG 3 cut(s) 1994, 2499, 2651
NarI GGCGCC 1 cut(s) 2758
NciI CCSGG 1 cut(s) 1198
NdeII GATC 6 cut(s) 710, 2133, 2390, 2443, 2494, 2764
NlaIII CATG 7 cut(s) 2062, 2354, 2459, 2492, 2576, 2717, 3028
NmuCI GTSAC 6 cut(s) 1133, 1354, 1401, 1539, 2092, 2121
NsiI ATGCAT 1 cut(s) 2891
NspI RCATGY 1 cut(s) 2062
OliI CACNNNNGTG 1 cut(s) 3039
PaeI GCATGC 1 cut(s) 2062
PaqCI CACCTGC 2 cut(s) 1468, 1934
PasI CCCWGGG 1 cut(s) 2244
PceI AGGCCT 1 cut(s) 2847
PciSI GCTCTTC 1 cut(s) 1513
PcsI WCGNNNNNNNCGW 1 cut(s) 1385
PctI GAATGC 2 cut(s) 275, 422
PfeI GAWTC 3 cut(s) 1240, 2038, 2637
PkrI GCNGC 8 cut(s) 80, 262, 1195, 1582, 1660, 2557, 2653, 3085
PleI GAGTC 5 cut(s) 378, 1039, 1105, 2101, 2510
PluTI GGCGCC 1 cut(s) 2761
PpsI GAGTC 5 cut(s) 378, 1039, 1105, 2101, 2510
PpuMI RGGWCCY 1 cut(s) 54
PshAI GACNNNNGTC 2 cut(s) 1921, 2119
Psp5II RGGWCCY 1 cut(s) 54
Psp6I CCWGG 3 cut(s) 1861, 2243, 2671
PspFI CCCAGC 5 cut(s) 108, 499, 734, 802, 1474
PspGI CCWGG 3 cut(s) 1861, 2243, 2671
PspOMI GGGCCC 1 cut(s) 1020
PspPI GGNCC 7 cut(s) 54, 314, 606, 1020, 1021, 1181, 2924
PspPPI RGGWCCY 1 cut(s) 54
PsrI GAACNNNNNNTAC 2 cut(s) 478, 510
PstNI CAGNNNCTG 4 cut(s) 713, 1655, 1775, 1964
PsuI RGATCY 2 cut(s) 710, 2390
RseI CAYNNNNRTG 2 cut(s) 2718, 3039
SalI GTCGAC 1 cut(s) 3029
SapI GCTCTTC 1 cut(s) 1513
SaqAI TTAA 3 cut(s) 2450, 2850, 2883
SatI GCNGC 8 cut(s) 79, 261, 1194, 1581, 1659, 2556, 2652, 3084
Sau3AI GATC 6 cut(s) 710, 2133, 2390, 2443, 2494, 2764
Sau96I GGNCC 7 cut(s) 54, 314, 606, 1020, 1021, 1181, 2924
ScaI AGTACT 3 cut(s) 640, 664, 874
SchI GAGTC 5 cut(s) 379, 1039, 1106, 2101, 2510
ScrFI CCNGG 4 cut(s) 1198, 1863, 2245, 2673
SduI GDGCHC 7 cut(s) 142, 401, 658, 829, 1024, 2377, 2541
SfaNI GCATC 4 cut(s) 1472, 1986, 2940, 3070
SfoI GGCGCC 1 cut(s) 2759
SinI GGWCC 4 cut(s) 54, 314, 1181, 2924
SmiI ATTTAAAT 1 cut(s) 2451
SmiMI CAYNNNNRTG 2 cut(s) 2718, 3039
SmlI CTYRAG 4 cut(s) 1440, 1932, 2504, 2768
SmoI CTYRAG 4 cut(s) 1440, 1932, 2504, 2768
SphI GCATGC 1 cut(s) 2062
SseBI AGGCCT 1 cut(s) 2847
SsiI CCGC 5 cut(s) 1580, 1628, 1659, 1992, 2651
SspDI GGCGCC 1 cut(s) 2757
SspMI CTAG 2 cut(s) 798, 1305
StuI AGGCCT 1 cut(s) 2847
StyD4I CCNGG 4 cut(s) 1196, 1861, 2243, 2671
StyI CCWWGG 1 cut(s) 2220
SwaI ATTTAAAT 1 cut(s) 2451
TaaI ACNGT 7 cut(s) 1008, 1185, 1222, 1389, 1557, 2289, 2813
TaiI ACGT 4 cut(s) 329, 1217, 1712, 3023
TaqI TCGA 4 cut(s) 368, 2036, 2113, 3030
TatI WGTACW 7 cut(s) 638, 662, 872, 1222, 1948, 2485, 3045
TauI GCSGC 3 cut(s) 1583, 1661, 2654
TfiI GAWTC 3 cut(s) 1240, 2038, 2637
Tru1I TTAA 3 cut(s) 2450, 2850, 2883
Tru9I TTAA 3 cut(s) 2450, 2850, 2883
TscAI CASTG 4 cut(s) 1660, 2294, 2331, 3046
TseFI GTSAC 6 cut(s) 1133, 1354, 1401, 1539, 2092, 2121
TseI GCWGC 5 cut(s) 78, 260, 1193, 2555, 3083
Tsp45I GTSAC 6 cut(s) 1133, 1354, 1401, 1539, 2092, 2121
TspGWI ACGGA 2 cut(s) 1527, 2373
TspRI CASTG 4 cut(s) 1660, 2294, 2331, 3046
VneI GTGCAC 1 cut(s) 654
VpaK11BI GGWCC 4 cut(s) 54, 314, 1181, 2924
XagI CCTNNNNNAGG 2 cut(s) 939, 1053
XapI RAATTY 2 cut(s) 1672, 2049
XceI RCATGY 1 cut(s) 2062
XcmI CCANNNNNNNNNTGG 1 cut(s) 65
XmiI GTMKAC 4 cut(s) 290, 2522, 2915, 3030
XspI CTAG 2 cut(s) 798, 1305
ZrmI AGTACT 3 cut(s) 640, 664, 874
Zsp2I ATGCAT 1 cut(s) 2891
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.