Prupe.5G136300_v2.0.a1

Nuclear pore complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0007827
Physical Location & Seq
Forward (+)
12907548 .. 12915088
7541 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G136300.1

Sequence Viewer

Length: 3015 bp
ATGTTTGGTTCTACTAACCCTTTTGGGCAGTCATCTAGCAGCCCGTTTGCGTCCCAACCGGTCTTTGGGCAAACCAGCAACACAAGTAACAATCCTTTTGTTCCCAAGCCTTTTGGTAGCACAACTCCGTTTGGTGCCCAAACAGGGAGTTCCATATTTGGCGGCACTTCAACTGGTGTATTTGGTGCAGCTCAATCTTCTTCACCTTTTCCTTCCTCAACGACCTTTGGTGCTGCTTCATCTTCACCAGCTTTTGGAAATACAACTCCTGCTTTTGGAGCAGCTTCTAGTGCGGCTTTCAATAGTTCACCATCACCTTTTGGTGGTTCATCTGGTTTTGGTCAGAAGCCTGTTTTTGGAGCATTTGGGTCCAATACTACTCAACCAAGTCCTTTTGGAAGCACAACTCAGCCATCACAGCCAGCATTTGGGAGTGGTATATTTGGTTCCACCACACCATTTGGTGGATCAAGTCAGCCAGCATTTGGTGCTACCACCACCCCAACAGCCTTTGGTGGTACAAGTAGTCCAGCCTTTGGTGCTACAACCACCCCAGCGTTTGGTGCTACAACCACCCCAGCATTTGGTGCTACAAGCACCCCAGCCTTTGGGGCTACTAGCAACCCCCCATCCTTTGGGGCTACTAGCACCCCCCCAGCCTTTGGGGCTACAAGCAGTCCAGCCTTTGGTTCCACAACAAGTCCTACGTTTGGAAGCACAGGATCTGCATTCGGGGTGTCAAATTCCTCCGTGTTTGGATCTACGGGAGCATTTGGGGCTTCAAGCACCCCAGCTTTTGGTTCATCTGGATCCACCTTTGGTACTTCAAGCAATCCAGGTTTTGGTGCGTCAAGTGCTCCTGGTTTTGGTTCATCCAGTACTCCATCTTTCACCTTTACATCAGCTCCTGCTTTTGGCCAATCAAATTCTACATTTGGTAGTTCCTCGTCTCCATTTGGAGCACAGAATTCTCCATTCGGAGCTCAGCCAACACCATTGGGGAACAATACCTTTGGGCAGTCAGCTTTTGGGGGCCAACAACGTGGTGGTAGTAGAGTGGCTGCATATACAGAAACTCCTGAACCAGATGGTGGTAGTGGGGCTACTGCTGCAAAATTGGAGTCAATATCAGCAATGTCAGTATATAAAGACAAAAGTCACGAAGAACTACGCTGGGAGGATTATCAATTGGGGGATAAAGGTGGTCCAGCTCCTGCTGGTGGGAGTGCCTTTGGCATGTCTACAGCACAACCAAACTCTTTGAATACTGCGTCATCATTTCCTCAAGCGTCTACAAGTCCTTTTAATACCGCAACCGGTCCTAATTTGTTTACTCCAAAAACTCCATCCTTCCCTTCTACAGGCTTTGGAACATCGTCTACACCATTCAGTTCATCAACTTTTGGGCTTTCTACTTCAACCAATACTTTTAACCCATCATCATCTCCCTCGGGTTTTGGACAAACCTCATCTCCATCTCTCTTTACTTCATCGGCGCCATCCACATTTTCATTTTCTGCTCCAGCTCAAACATCAAATTCCACATTTAATACGGGAATATTCAATTCCACTGCTCCAGTTGCACAGACAGGTAGTACTTTTGGACTAAGTACCACTTCGTTTGGGCAGAACACAGGCCCATTTGGTCAATCAAATGCATTCAATACTCCCTCTACTGGTTATGGTTTGGGGAGCTCCTCTACTGCTAGTGCTACAAGCAACCTGATGGGTTTTAGTCAACCTACTTCTTCTTTTCCCCAGCCTTTCCAGTCATCTCAGCCTCCTCAGAACAGTGGGTTTGGATTCAACAGTTTTAATCAAACTCAGCCAGGCAATACAGGTGGCTTGGGTGGTTCAGTGGGAATTCTTGGGCAGAATAACTTTGGACAATTGTCTGCTACTCAAAGCTCTGCAGCTGTACAACCAGTACCTGCTACCAATCCATTTGGAACGCTCCCTGCAATGCCTCAGATGTCAATTGGTCGTGGTGGAACTGCACCATCAATTCAATATGGGATTTCAAGCATGCCTGTTGTAGACAAACTGGCGCCTGTTAGAATGTCATCATCTTTAGTGACTTCTCGACACCTGACTCAAAGGCGGGTCAGATTGCCTGTGAGAAAATATTATCCTAAGAATGATGATCAAAGGTTCCCTTTCTTTATTGATGATGAAGAATCAGTCAATACCCCCAAGGCGGATGCCCTTTTCCTTCCCAGGGAAAACCCAAGAGCACTCGTCATTCGTCCCAAAGAACAGTGGCCTTTAAGGGCCAGTGCCGAGAAAGCATCCCCATTAAAGGATACTTATACTCCGGTGCATGAGAATGAAACTCCACATGAAGATGGCATTGTCAAGGAGCGTGTGAATCATGTCAAAGCCAACCAGAAACCTAACGGAGTCCATGATGATCATTCTATTCAGAAAGGGGACTCATATATGACACTGAGTGGGCATAGAGCCGGTGAGGCTGCTATTGTATATGAGCATGGCGCTGACATTGAGGCACTAATGCCAAAGCTCCGGCGCTCTGATTACTATACAGAGCCTCGAATCCAGGAACTGGCGGCGAAGGAAAGGGCAGAACCTGGGTTCTGCTGTCACGTCAAGGATTTTGTGGTCGGACGAGTTGACTATGGTAGCATCAAGTTCTTTGGTGAGACAGATGTGAGACGCCTTGATCTGGAATCTGTGGTGCAGTTTAACAATCGGGAGGTGATAGTGTACATGGATGACAACAAGAAACCTCCAGTTGGGCAAGGCCTCAATAAACCTGCTGAGGTAACACTTCTCAACATTACATGCATGGACAAGAAAACAGGGCGCCGGTTTACAGAAGGGCCAAAAACTGAAAAATACAAGCAGATGTTGAAGAAGAAAGCGGAGGATCAAGGTGCCGAGTTTGTCTCTTATGACCCCTTGAAAGGAGAGTGGAAGTTCAAGGTAAGCCACTTCAGTGAGTACAAGTTGGGAGATGAAGACGACTGGGATGTGGATGGTGCTCAAGATTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000972 GO:0000973 GO:0003674 GO:0003676 GO:0003682 GO:0003712 GO:0003713 GO:0003723 GO:0003729 GO:0005048 GO:0005198 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0006999 GO:0008104 GO:0008139 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016032 GO:0016043 GO:0016234 GO:0016604 GO:0017038 GO:0017056 GO:0019219 GO:0019222 GO:0022607 GO:0031080 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031503 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033120 GO:0033218 GO:0033365 GO:0034397 GO:0034398 GO:0034399 GO:0034504 GO:0034613 GO:0034622 GO:0034641 GO:0034645 GO:0042277 GO:0042405 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044614 GO:0044615 GO:0045184 GO:0045935 GO:0046483 GO:0046907 GO:0046931 GO:0048024 GO:0048026 GO:0048518 GO:0048522 GO:0048583 GO:0050000 GO:0050657 GO:0050658 GO:0050684 GO:0050685 GO:0050789 GO:0050794 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051254 GO:0051276 GO:0051292 GO:0051640 GO:0051641 GO:0051649 GO:0051704 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1902446 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903508 GO:1990841 GO:1990904 GO:2000030 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03013 ko05164 map03013 map05164
Pfam Domains
Protein Families
Nucleoporin2

Protein Analysis

1005

Amino Acids

103.84

Weight (kDa)

6.85

Isoelectric Point (pI)

53.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1939, 2782
AccB1I GGYRCC 5 cut(s) 134, 1495, 2047, 2823, 2894
AccI GTMKAC 4 cut(s) 1241, 1292, 1379, 2037
AciI CCGC 7 cut(s) 162, 293, 1311, 2101, 2198, 2567, 2882
AclWI GGATC 6 cut(s) 475, 730, 766, 804, 817, 2895
AcoI YGGCCR 1 cut(s) 916
AcsI RAATTY 5 cut(s) 742, 925, 967, 1537, 1863
AcuI CTGAAG 1 cut(s) 2938
AcyI GRCGYC 4 cut(s) 1496, 2048, 2674, 2824
AdeI CACNNNGTG 1 cut(s) 2450
AfaI GTAC 9 cut(s) 520, 823, 880, 1597, 1612, 1920, 1929, 2726, 2963
AgeI ACCGGT 2 cut(s) 58, 1316
AjiI CACGTC 1 cut(s) 2605
AjnI CCWGG 6 cut(s) 835, 859, 1828, 2216, 2556, 2587
AleI CACNNNNGTG 1 cut(s) 2955
Alw21I GWGCWC 6 cut(s) 859, 964, 985, 1697, 2236, 3004
Alw26I GTCTC 4 cut(s) 954, 2654, 2665, 2911
AlwI GGATC 6 cut(s) 475, 730, 766, 804, 817, 2895
AlwNI CAGNNNCTG 6 cut(s) 725, 908, 1214, 1931, 2563, 2588
Ama87I CYCGRG 1 cut(s) 1450
AoxI GGCC 7 cut(s) 916, 1033, 1636, 2261, 2271, 2761, 2840
ApeKI GCWGC 8 cut(s) 39, 188, 233, 281, 1061, 1109, 1913, 2471
ApoI RAATTY 5 cut(s) 742, 925, 967, 1537, 1863
ArsI GACNNNNNNTTYG 2 cut(s) 1106, 1138
AsiGI ACCGGT 2 cut(s) 58, 1316
AspLEI GCGC 5 cut(s) 1498, 2050, 2495, 2529, 2826
AspS9I GGNCC 7 cut(s) 369, 1033, 1205, 1319, 1637, 2271, 2840
AsuHPI GGTGA 8 cut(s) 195, 237, 300, 306, 883, 2477, 2669, 2728
AvaI CYCGRG 1 cut(s) 1450
AvaII GGWCC 3 cut(s) 369, 1205, 1319
BaeGI GKGCMC 1 cut(s) 139
BalI TGGCCA 1 cut(s) 918
BamHI GGATCC 1 cut(s) 809
BanI GGYRCC 5 cut(s) 134, 1495, 2047, 2823, 2894
BanII GRGCYC 2 cut(s) 985, 1697
BbsI GAAGAC 1 cut(s) 2985
Bbv12I GWGCWC 6 cut(s) 859, 964, 985, 1697, 2236, 3004
BbvCI CCTCAGC 1 cut(s) 2778
BbvI GCAGC 8 cut(s) 51, 200, 220, 293, 1048, 1096, 1925, 2458
BciT130I CCWGG 6 cut(s) 837, 861, 1830, 2218, 2558, 2589
BciVI GTATCC 1 cut(s) 2296
BclI TGATCA 2 cut(s) 2143, 2410
BcoDI GTCTC 4 cut(s) 954, 2654, 2665, 2911
BfaI CTAG 5 cut(s) 36, 288, 618, 645, 1707
BfmI CTRYAG 3 cut(s) 1242, 1359, 1911
BfoI RGCGCY 5 cut(s) 1499, 2051, 2496, 2530, 2827
BfuAI ACCTGC 2 cut(s) 1939, 2782
BfuI GTATCC 1 cut(s) 2296
BglI GCCNNNNNGGC 3 cut(s) 611, 665, 2468
BlpI GCTNAGC 1 cut(s) 984
BmcAI AGTACT 2 cut(s) 880, 1597
Bme1390I CCNGG 6 cut(s) 837, 861, 1830, 2218, 2558, 2589
Bme18I GGWCC 3 cut(s) 369, 1205, 1319
BmeT110I CYCGRG 1 cut(s) 1450
BmgBI CACGTC 1 cut(s) 2605
BmgT120I GGNCC 7 cut(s) 369, 1033, 1205, 1319, 1637, 2271, 2840
BmrFI CCNGG 6 cut(s) 837, 861, 1830, 2218, 2558, 2589
BmrI ACTGGG 1 cut(s) 2995
BmsI GCATC 3 cut(s) 2191, 2297, 2652
BmuI ACTGGG 1 cut(s) 2995
BoxI GACNNNNGTC 2 cut(s) 1155, 1891
BpiI GAAGAC 1 cut(s) 2985
BplI GAGNNNNNCTC 2 cut(s) 2891, 2923
BpmI CTGGAG 3 cut(s) 1506, 1560, 2733
Bpu10I CCTNAGC 1 cut(s) 2778
Bpu1102I GCTNAGC 1 cut(s) 984
BpuEI CTTGAG 2 cut(s) 1269, 2988
BsaHI GRCGYC 4 cut(s) 1496, 2048, 2674, 2824
BsaJI CCNNGG 5 cut(s) 1449, 2193, 2216, 2217, 2588
BsaWI WCCGGW 3 cut(s) 58, 1316, 2314
BsaXI ACNNNNNCTCC 8 cut(s) 889, 919, 1060, 1090, 1456, 1486, 2296, 2326
Bse118I RCCGGY 4 cut(s) 58, 1316, 2462, 2826
Bse3DI GCAATG 2 cut(s) 1140, 1968
BseBI CCWGG 6 cut(s) 837, 861, 1830, 2218, 2558, 2589
BseDI CCNNGG 5 cut(s) 1449, 2193, 2216, 2217, 2588
BseGI GGATG 9 cut(s) 629, 872, 1346, 1499, 2206, 2288, 2737, 2995, 3001
BseMI GCAATG 2 cut(s) 1140, 1968
BseMII CTCAG 8 cut(s) 422, 998, 1790, 1799, 1838, 1982, 2438, 2769
BseRI GAGGAG 2 cut(s) 1687, 1773
BseSI GKGCMC 1 cut(s) 139
BseXI GCAGC 8 cut(s) 51, 200, 220, 293, 1048, 1096, 1925, 2458
BseYI CCCAGC 7 cut(s) 553, 577, 601, 655, 790, 1173, 1758
BsgI GTGCAG 3 cut(s) 207, 1980, 2717
BshFI GGCC 7 cut(s) 918, 1035, 1638, 2263, 2273, 2763, 2842
BshNI GGYRCC 5 cut(s) 134, 1495, 2047, 2823, 2894
BshTI ACCGGT 2 cut(s) 58, 1316
BsiHKAI GWGCWC 6 cut(s) 859, 964, 985, 1697, 2236, 3004
BsiHKCI CYCGRG 1 cut(s) 1450
BsiSI CCGG 6 cut(s) 59, 1317, 2315, 2463, 2524, 2827
BslFI GGGAC 3 cut(s) 37, 2232, 2444
BsmAI GTCTC 4 cut(s) 954, 2654, 2665, 2911
BsmBI CGTCTC 2 cut(s) 954, 2665
BsmFI GGGAC 3 cut(s) 37, 2232, 2444
BsmI GAATGC 2 cut(s) 728, 1658
BsnI GGCC 7 cut(s) 918, 1035, 1638, 2263, 2273, 2763, 2842
BsoBI CYCGRG 1 cut(s) 1450
Bsp1286I GDGCHC 7 cut(s) 139, 859, 964, 985, 1697, 2236, 3004
Bsp1407I TGTACA 2 cut(s) 1918, 2724
Bsp143I GATC 8 cut(s) 467, 722, 758, 809, 2143, 2410, 2680, 2887
Bsp1720I GCTNAGC 1 cut(s) 984
BspACI CCGC 7 cut(s) 162, 293, 1311, 2101, 2198, 2567, 2882
BspANI GGCC 7 cut(s) 918, 1035, 1638, 2263, 2273, 2763, 2842
BspCNI CTCAG 8 cut(s) 421, 997, 1789, 1798, 1837, 1981, 2439, 2770
BspMAI CTGCAG 1 cut(s) 1915
BspMI ACCTGC 2 cut(s) 1939, 2782
BspPI GGATC 6 cut(s) 475, 730, 766, 804, 817, 2895
BspT107I GGYRCC 5 cut(s) 134, 1495, 2047, 2823, 2894
BsrDI GCAATG 2 cut(s) 1140, 1968
BsrFI RCCGGY 4 cut(s) 58, 1316, 2462, 2826
BsrGI TGTACA 2 cut(s) 1918, 2724
BssAI RCCGGY 4 cut(s) 58, 1316, 2462, 2826
BssECI CCNNGG 5 cut(s) 1449, 2193, 2216, 2217, 2588
BssMI GATC 8 cut(s) 467, 722, 758, 809, 2143, 2410, 2680, 2887
BssNI GRCGYC 4 cut(s) 1496, 2048, 2674, 2824
BssT1I CCWWGG 1 cut(s) 2193
Bst2UI CCWGG 6 cut(s) 837, 861, 1830, 2218, 2558, 2589
Bst4CI ACNGT 3 cut(s) 1793, 1811, 2259
BstACI GRCGYC 4 cut(s) 1496, 2048, 2674, 2824
BstAPI GCANNNNNTGC 2 cut(s) 488, 587
BstAUI TGTACA 2 cut(s) 1918, 2724
BstC8I GCNNGC 3 cut(s) 423, 480, 2027
BstENI CCTNNNNNAGG 1 cut(s) 1359
BstF5I GGATG 9 cut(s) 629, 872, 1346, 1499, 2206, 2288, 2737, 2995, 3001
BstH2I RGCGCY 5 cut(s) 1499, 2051, 2496, 2530, 2827
BstHHI GCGC 5 cut(s) 1498, 2050, 2495, 2529, 2826
BstKTI GATC 8 cut(s) 470, 725, 761, 812, 2146, 2413, 2683, 2890
BstMAI GTCTC 4 cut(s) 954, 2654, 2665, 2911
BstMBI GATC 8 cut(s) 467, 722, 758, 809, 2143, 2410, 2680, 2887
BstNI CCWGG 6 cut(s) 837, 861, 1830, 2218, 2558, 2589
BstNSI RCATGY 3 cut(s) 1240, 2029, 2805
BstPAI GACNNNNGTC 2 cut(s) 1155, 1891
BstSCI CCNGG 6 cut(s) 835, 859, 1828, 2216, 2556, 2587
BstSFI CTRYAG 3 cut(s) 1242, 1359, 1911
BstSLI GKGCMC 1 cut(s) 139
BstV1I GCAGC 8 cut(s) 51, 200, 220, 293, 1048, 1096, 1925, 2458
BstV2I GAAGAC 1 cut(s) 2985
BstX2I RGATCY 3 cut(s) 722, 758, 809
BstXI CCANNNNNNTGG 1 cut(s) 1043
BstYI RGATCY 3 cut(s) 722, 758, 809
BsuI GTATCC 1 cut(s) 2296
BsuRI GGCC 7 cut(s) 918, 1035, 1638, 2263, 2273, 2763, 2842
BtrI CACGTC 1 cut(s) 2605
BtsCI GGATG 9 cut(s) 629, 872, 1346, 1499, 2206, 2288, 2737, 2995, 3001
BtsI GCAGTG 1 cut(s) 1569
BtsIMutI CAGTG 7 cut(s) 1569, 1798, 1863, 2264, 2281, 2444, 2962
BveI ACCTGC 2 cut(s) 1939, 2782
Cac8I GCNNGC 3 cut(s) 423, 480, 2027
CaiI CAGNNNCTG 6 cut(s) 725, 908, 1214, 1931, 2563, 2588
CfoI GCGC 5 cut(s) 1498, 2050, 2495, 2529, 2826
Cfr10I RCCGGY 4 cut(s) 58, 1316, 2462, 2826
Cfr13I GGNCC 7 cut(s) 369, 1033, 1205, 1319, 1637, 2271, 2840
CseI GACGC 5 cut(s) 39, 837, 1260, 1278, 2682
Csp6I GTAC 9 cut(s) 519, 822, 879, 1596, 1611, 1919, 1928, 2725, 2962
CspAI ACCGGT 2 cut(s) 58, 1316
CspCI CAANNNNNGTGG 6 cut(s) 442, 477, 1603, 1638, 1822, 1857
CviQI GTAC 9 cut(s) 519, 822, 879, 1596, 1611, 1919, 1928, 2725, 2962
DinI GGCGCC 3 cut(s) 1497, 2049, 2825
DpnI GATC 8 cut(s) 469, 724, 760, 811, 2145, 2412, 2682, 2889
DpnII GATC 8 cut(s) 467, 722, 758, 809, 2143, 2410, 2680, 2887
DraIII CACNNNGTG 1 cut(s) 2450
EaeI YGGCCR 1 cut(s) 916
EciI GGCGGA 1 cut(s) 2213
Ecl136II GAGCTC 2 cut(s) 983, 1695
Eco130I CCWWGG 1 cut(s) 2193
Eco147I AGGCCT 1 cut(s) 2763
Eco24I GRGCYC 2 cut(s) 985, 1697
Eco47I GGWCC 3 cut(s) 369, 1205, 1319
Eco53kI GAGCTC 2 cut(s) 983, 1695
Eco57I CTGAAG 1 cut(s) 2938
Eco88I CYCGRG 1 cut(s) 1450
EcoICRI GAGCTC 2 cut(s) 983, 1695
EcoNI CCTNNNNNAGG 1 cut(s) 1359
EcoRI GAATTC 2 cut(s) 967, 1863
EcoRII CCWGG 6 cut(s) 835, 859, 1828, 2216, 2556, 2587
EcoT14I CCWWGG 1 cut(s) 2193
EcoT22I ATGCAT 2 cut(s) 1660, 2807
EcoT38I GRGCYC 2 cut(s) 985, 1697
EgeI GGCGCC 3 cut(s) 1497, 2049, 2825
EheI GGCGCC 3 cut(s) 1497, 2049, 2825
ErhI CCWWGG 1 cut(s) 2193
Esp3I CGTCTC 2 cut(s) 954, 2665
FalI AAGNNNNNCTT 4 cut(s) 1600, 1632, 2140, 2172
FaqI GGGAC 3 cut(s) 37, 2232, 2444
FauI CCCGC 1 cut(s) 2094
FbaI TGATCA 2 cut(s) 2143, 2410
FblI GTMKAC 4 cut(s) 1241, 1292, 1379, 2037
FokI GGATG 9 cut(s) 616, 859, 1333, 1486, 2213, 2275, 2744, 3002, 3008
FriOI GRGCYC 2 cut(s) 985, 1697
FspBI CTAG 5 cut(s) 36, 288, 618, 645, 1707
GlaI GCGC 5 cut(s) 1497, 2049, 2494, 2528, 2825
GsaI CCCAGC 7 cut(s) 557, 581, 605, 659, 794, 1177, 1762
GsuI CTGGAG 3 cut(s) 1506, 1560, 2733
HaeII RGCGCY 5 cut(s) 1499, 2051, 2496, 2530, 2827
HaeIII GGCC 7 cut(s) 918, 1035, 1638, 2263, 2273, 2763, 2842
HapII CCGG 6 cut(s) 59, 1317, 2315, 2463, 2524, 2827
HgaI GACGC 5 cut(s) 39, 837, 1260, 1278, 2682
HhaI GCGC 5 cut(s) 1498, 2050, 2495, 2529, 2826
Hin1I GRCGYC 4 cut(s) 1496, 2048, 2674, 2824
Hin6I GCGC 5 cut(s) 1496, 2048, 2493, 2527, 2824
HinP1I GCGC 5 cut(s) 1496, 2048, 2493, 2527, 2824
HincII GTYRAC 2 cut(s) 1739, 2632
HindII GTYRAC 2 cut(s) 1739, 2632
HinfI GANTC 9 cut(s) 1121, 1803, 2092, 2177, 2368, 2400, 2432, 2553, 2687
HpaII CCGG 6 cut(s) 59, 1317, 2315, 2463, 2524, 2827
HphI GGTGA 8 cut(s) 195, 237, 300, 306, 883, 2477, 2669, 2728
Hpy188I TCNGA 8 cut(s) 345, 980, 1788, 1971, 2108, 2424, 2533, 2624
Hpy188III TCNNGA 7 cut(s) 807, 1079, 1160, 2082, 2684, 2711, 3005
HpyAV CCTTC 6 cut(s) 222, 1360, 1365, 2222, 2566, 2831
HpyCH4III ACNGT 3 cut(s) 1793, 1811, 2259
HpyCH4IV ACGT 3 cut(s) 707, 1042, 2604
HpySE526I ACGT 3 cut(s) 707, 1042, 2604
Hsp92I GRCGYC 4 cut(s) 1496, 2048, 2674, 2824
HspAI GCGC 5 cut(s) 1496, 2048, 2493, 2527, 2824
KasI GGCGCC 3 cut(s) 1495, 2047, 2823
Ksp22I TGATCA 2 cut(s) 2143, 2410
Kzo9I GATC 8 cut(s) 467, 722, 758, 809, 2143, 2410, 2680, 2887
Lsp1109I GCAGC 8 cut(s) 51, 200, 220, 293, 1048, 1096, 1925, 2458
LweI GCATC 3 cut(s) 2191, 2297, 2652
MaeI CTAG 5 cut(s) 36, 288, 618, 645, 1707
MaeII ACGT 3 cut(s) 707, 1042, 2604
MaeIII GTNAC 5 cut(s) 86, 1157, 2074, 2600, 2782
MalI GATC 8 cut(s) 469, 724, 760, 811, 2145, 2412, 2682, 2889
MboI GATC 8 cut(s) 467, 722, 758, 809, 2143, 2410, 2680, 2887
MfeI CAATTG 3 cut(s) 1187, 1889, 1977
MflI RGATCY 3 cut(s) 722, 758, 809
MhlI GDGCHC 7 cut(s) 139, 859, 964, 985, 1697, 2236, 3004
MlsI TGGCCA 1 cut(s) 918
MluNI TGGCCA 1 cut(s) 918
Mly113I GGCGCC 3 cut(s) 1496, 2048, 2824
MlyI GAGTC 4 cut(s) 1130, 2086, 2409, 2426
MmeI TCCRAC 1 cut(s) 2602
Mox20I TGGCCA 1 cut(s) 918
Mph1103I ATGCAT 2 cut(s) 1660, 2807
MscI TGGCCA 1 cut(s) 918
MseI TTAA 7 cut(s) 1305, 1431, 1548, 1815, 2267, 2297, 2703
MslI CAYNNNNRTG 3 cut(s) 2325, 2343, 2955
Msp20I TGGCCA 1 cut(s) 918
MspA1I CMGCKG 1 cut(s) 1916
MspI CCGG 6 cut(s) 59, 1317, 2315, 2463, 2524, 2827
MspR9I CCNGG 6 cut(s) 837, 861, 1830, 2218, 2558, 2589
MunI CAATTG 3 cut(s) 1187, 1889, 1977
Mva1269I GAATGC 2 cut(s) 728, 1658
MvaI CCWGG 6 cut(s) 837, 861, 1830, 2218, 2558, 2589
NarI GGCGCC 3 cut(s) 1496, 2048, 2824
NdeII GATC 8 cut(s) 467, 722, 758, 809, 2143, 2410, 2680, 2887
NmeAIII GCCGAG 2 cut(s) 2305, 2923
NmuCI GTSAC 3 cut(s) 1157, 2074, 2600
NsiI ATGCAT 2 cut(s) 1660, 2807
NspI RCATGY 3 cut(s) 1240, 2029, 2805
OliI CACNNNNGTG 1 cut(s) 2955
PaeI GCATGC 1 cut(s) 2029
PasI CCCWGGG 1 cut(s) 2217
PceI AGGCCT 1 cut(s) 2763
PctI GAATGC 2 cut(s) 728, 1658
PfeI GAWTC 5 cut(s) 1803, 2177, 2368, 2553, 2687
PfoI TCCNGGA 1 cut(s) 2556
PinAI ACCGGT 2 cut(s) 58, 1316
PleI GAGTC 4 cut(s) 1129, 2086, 2408, 2426
PluTI GGCGCC 3 cut(s) 1499, 2051, 2827
PpsI GAGTC 4 cut(s) 1129, 2086, 2408, 2426
PshAI GACNNNNGTC 2 cut(s) 1155, 1891
Psp124BI GAGCTC 2 cut(s) 985, 1697
Psp6I CCWGG 6 cut(s) 835, 859, 1828, 2216, 2556, 2587
PspFI CCCAGC 7 cut(s) 553, 577, 601, 655, 790, 1173, 1758
PspGI CCWGG 6 cut(s) 835, 859, 1828, 2216, 2556, 2587
PspPI GGNCC 7 cut(s) 369, 1033, 1205, 1319, 1637, 2271, 2840
PsrI GAACNNNNNNTAC 4 cut(s) 430, 462, 1363, 1395
PstI CTGCAG 1 cut(s) 1915
PstNI CAGNNNCTG 6 cut(s) 725, 908, 1214, 1931, 2563, 2588
PsuI RGATCY 3 cut(s) 722, 758, 809
PvuII CAGCTG 1 cut(s) 1916
RsaI GTAC 9 cut(s) 520, 823, 880, 1597, 1612, 1920, 1929, 2726, 2963
RsaNI GTAC 9 cut(s) 519, 822, 879, 1596, 1611, 1919, 1928, 2725, 2962
RseI CAYNNNNRTG 3 cut(s) 2325, 2343, 2955
SacI GAGCTC 2 cut(s) 985, 1697
SaqAI TTAA 7 cut(s) 1305, 1431, 1548, 1815, 2267, 2297, 2703
Sau3AI GATC 8 cut(s) 467, 722, 758, 809, 2143, 2410, 2680, 2887
Sau96I GGNCC 7 cut(s) 369, 1033, 1205, 1319, 1637, 2271, 2840
ScaI AGTACT 2 cut(s) 880, 1597
SchI GAGTC 4 cut(s) 1130, 2086, 2409, 2426
ScrFI CCNGG 6 cut(s) 837, 861, 1830, 2218, 2558, 2589
SduI GDGCHC 7 cut(s) 139, 859, 964, 985, 1697, 2236, 3004
SfaNI GCATC 3 cut(s) 2191, 2297, 2652
SfcI CTRYAG 3 cut(s) 1242, 1359, 1911
SfoI GGCGCC 3 cut(s) 1497, 2049, 2825
SinI GGWCC 3 cut(s) 369, 1205, 1319
SmiMI CAYNNNNRTG 3 cut(s) 2325, 2343, 2955
SmlI CTYRAG 2 cut(s) 1284, 3003
SmoI CTYRAG 2 cut(s) 1284, 3003
SphI GCATGC 1 cut(s) 2029
SseBI AGGCCT 1 cut(s) 2763
SsiI CCGC 7 cut(s) 162, 293, 1311, 2101, 2198, 2567, 2882
SspDI GGCGCC 3 cut(s) 1495, 2047, 2823
SspI AATATT 2 cut(s) 1560, 2126
SspMI CTAG 5 cut(s) 36, 288, 618, 645, 1707
SstI GAGCTC 2 cut(s) 985, 1697
StuI AGGCCT 1 cut(s) 2763
StyD4I CCNGG 6 cut(s) 835, 859, 1828, 2216, 2556, 2587
StyI CCWWGG 1 cut(s) 2193
TaaI ACNGT 3 cut(s) 1793, 1811, 2259
TaiI ACGT 3 cut(s) 710, 1045, 2607
TaqI TCGA 2 cut(s) 2083, 2551
TatI WGTACW 5 cut(s) 878, 1595, 1918, 2724, 2961
TauI GCSGC 3 cut(s) 165, 296, 2570
TfiI GAWTC 5 cut(s) 1803, 2177, 2368, 2553, 2687
Tru1I TTAA 7 cut(s) 1305, 1431, 1548, 1815, 2267, 2297, 2703
Tru9I TTAA 7 cut(s) 1305, 1431, 1548, 1815, 2267, 2297, 2703
TscAI CASTG 7 cut(s) 1576, 1798, 1863, 2264, 2281, 2451, 2962
TseFI GTSAC 3 cut(s) 1157, 2074, 2600
TseI GCWGC 8 cut(s) 39, 188, 233, 281, 1061, 1109, 1913, 2471
Tsp45I GTSAC 3 cut(s) 1157, 2074, 2600
TspGWI ACGGA 3 cut(s) 117, 739, 2412
TspRI CASTG 7 cut(s) 1576, 1798, 1863, 2264, 2281, 2451, 2962
VpaK11BI GGWCC 3 cut(s) 369, 1205, 1319
XagI CCTNNNNNAGG 1 cut(s) 1359
XapI RAATTY 5 cut(s) 742, 925, 967, 1537, 1863
XceI RCATGY 3 cut(s) 1240, 2029, 2805
XcmI CCANNNNNNNNNTGG 2 cut(s) 62, 1043
XmiI GTMKAC 4 cut(s) 1241, 1292, 1379, 2037
XspI CTAG 5 cut(s) 36, 288, 618, 645, 1707
ZrmI AGTACT 2 cut(s) 880, 1597
Zsp2I ATGCAT 2 cut(s) 1660, 2807
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.