Rh7BG092900

Nuclear pore complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0007827
Physical Location & Seq
Forward (+)
6858115 .. 6863225
5111 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG092900.1

Sequence Viewer

Length: 3051 bp
ATGTTTGGTTCTACGAGCCCTTTTGGGCAGTCATCTAACAGCCCATTTGGGTCCCAGTCGGTGTTTGGGCAAAGCAGCAACACAAGTAACAATCCTTTTGCTCCCCAGCCCTTTGGTAGCACCACTCCATTTGGTGCCCAGACAGGGAGTTCCCTATTTGGGGGAACTTCAACTGGCGTATTTGGTCAAACCCAATCCTCGCCTTTTGGTGCTTCATCCTCGCCAGCTTTCGGACAGCAGAGTTCTCCATTTGGAGCATCTTCTACTCCAGCATTTGGTGCACCATCGTCTACTCAAACAAGTCCATTTGGTGGAGCATCCGGTACGTCTGCTTTTGGTCAGAAGCCCGCTTTTGGAGCATTTGGGTCGAGTCCTGCTCAAACAAGTCCATTTGGAAGCACAGCTCAACCATCACAACCAGCATTTGGAAGCAATATGTTTGGTACCACCTCTACACCATTTGGTGCAAGTCAGCCTGCATTTGGCACTAATACTGCCCCAGCCTTTGGTTCAACGAATACCACAGGCTTTGGTGGCCAGAGCACCCCTGGTTTTGGTGGCCAAGGCACTCCAGCCTTTGGGGCCACAAGCGCTTCACCTTTTGGTAGTACAAGTACTCCGGCGTTTGGTGCTCCAAGTACTCCTACCTTTGGCTCAACACCAAGTCCTACATTTGGAAGCACAGGATCTGCATTTGGGACAACAAGTTCCAACTTGTTTGGATCAGGGGGAGCATTTGGGGGTTCAACCACGCCAGCTTTTGGTCAATCTAGCTCAGCTTTTGGTACCACAACAAGTGCTCCTGCTTTTGGTCAATCAAGTTCAGGTTTTGGCTTTTCAACAAGTGCTCCTGCATTTGGCCAATCAAGTTCAACCTTTGGTAGCACCCAATTTGCGGCTTCATCTCCTTTCGGAGCGCAGAGTTCGCCGTCTCCTTTCGGAGCGCAGAGTTCGCCATTTGGGGCTCAGTCAACAACACCAACACTTGGAAACACTGCCTTTGGACAGCCAGCTTTTGGGGGCCAACGGGGTGGAAGTAGAGTGACTGCTTACACAGGCACATCTGAACCAGATAGTAATGGAATGGGGAAATTGGAGTCAATATCAGCAATGCCAGCCTATAAAGAAAAAAGTCACGAGGAGTTGAGATGGGAGGATTACCAATTAGGGGATAAGGGTGGACCGTCTCCTGCTGGTGCGGGTAGCTTTGGCATATCAACTGTACAGACAAATACTTTGAATCCTAATCCTGCACCATCGTTTTCTCAAACATCTTCAAGTCCTTTTAATACCTCAACCTCATCTGGTTTATTTGCCCAAAAACCCTCATCCTTTCCTTCTACTGGTTTTGGTGTTACTTCATCTTCACCATTTAGTTCAACTTCACCGTTTAGTTCTTCATCAACTCAAACCAATTTTTTTACACCTGCATCATCTGCCTCACCATTTGGCCAAACGTCGTCTCCAGCTATTTTTAGTTCACCATCTTCCTTTTCATTCTCTACCCCGGCTACATCATCCACTCCCTCATTTAATTTTCCCACTCCATCAAACCCACAGACACAGTTTGGTCAAACAGGCACTACCTCGTTTGGGCTGAATCCATCTACCTTTGGTTCAAACTTGTTCAATAGTACTTCCAGTTTGCAGAGCAGTTCATTGGGTACTACAAGCAACCAACTGGGTCTTACTCAACCAGCTCCTGCTTTTCCTACTTTCCAGACATCTCAGCCTCTTCAGTCTAGTCCTTATGGCTTCAGCAACACCAATGCCTTCAGCAACACCAATACCTTTAATCAACCCCAGCCAGGCAACACAGGTGCTTTTGGTGGTTTAGCAGGCATTTCTGGTCAGAACAACTTTGGACAATCATCTGTGGCTCAAGGCTCTGCAGCTGTACAACAACCAGTACCTGCTACAAATCCATTTGGAACGCTCCCCGCGATGCCTCAGATGTCAATTGGTCGAGGGGGAACTGCACCATCAATTCAATATGGAATTTCAAGCATGCCTGTTGCGGATAAACCTGCGCCCGTTAGGGTAACATCCATCCTGACTCCTCGACACCTGTCACAACGCCGGATCAGATTACCTGCAAGAAAATATAATCCTAAGAATGATAACCCAAAGGCTTTTTTCAGTGATGATGAAGAAACACCCTCTACACCCAAGGGGGATGTTGTTTTCCATCCCAGGGAAAACCCAAGAGCACTCGTCATTCGTCCCCGAGAACAGTGGCCTCTTAGAGCGAGTGCTGAGAAAGCAACAGCACTGAAGAATACAACTACTCCAGTCCATGAGAATGGAAAAATTTCGGGAGCAGCACTCTTTGGGGGATCCAACTCTGAGGATAAAGACGAACCAGAAACTCTGCAAGAAAATGGTGCTGTTAAGGAGCATTTAAATCATGTCAAAGCTAATCAGAAACCTAATGGAGTACATGATGATCACGCTGTTCAGAAAGGGGACCCGTATACAACACTAAGTGGGCACAGAGCTGGTGAGGCTGCAATTGTGTATGAGCATGGTGCTGACATTGAGGCACAAATGCCGAAGCTCCGACGCTCTGATTACTACACAGAGCCCCGAATCCAAGAACTGGCAGCAAAGGAAAGGGCAGAGCCAGGGTTCTGCTGTCGTGTGAAGGACTTTGTGGTTGGGCGACATGGTTATGGTAGCATTAAGTTCTTGGGTGAGACAGATGTAAGGCGCCTTGATCTTGAGGCTCTGGTGCAGTTCAACAATAAGGAGGTAATCGTGTACGGTGATGAGAACAAGAAACCTCCTGTCGGGCAAGGGCTTAATAAACCTGCTGAGGTTACACTTCTCAACATTAAATGCATCGAGAAGAAGACTGGGCTTCAGTATACAGAAGGACCAAAAGTTGAGAAATACAAGGAGATGCTGAAGAGGAAGGCCGAGGAACAAGGTGCCAAGTTTGTCTCCTTTGACCCCAAGAAGGAAGAGTGGACGTTCATGGTCGACCACTTCAGTGAGTACAAGTTGAGAGATGATGACGACTGGGATGTGGATGCTGCCCAAGATTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000972 GO:0000973 GO:0003674 GO:0003676 GO:0003682 GO:0003712 GO:0003713 GO:0003723 GO:0003729 GO:0005048 GO:0005198 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0006999 GO:0008104 GO:0008139 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016032 GO:0016043 GO:0016234 GO:0016604 GO:0017038 GO:0017056 GO:0019219 GO:0019222 GO:0022607 GO:0031080 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031503 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033120 GO:0033218 GO:0033365 GO:0034397 GO:0034398 GO:0034399 GO:0034504 GO:0034613 GO:0034622 GO:0034641 GO:0034645 GO:0042277 GO:0042405 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044614 GO:0044615 GO:0045184 GO:0045935 GO:0046483 GO:0046907 GO:0046931 GO:0048024 GO:0048026 GO:0048518 GO:0048522 GO:0048583 GO:0050000 GO:0050657 GO:0050658 GO:0050684 GO:0050685 GO:0050789 GO:0050794 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051254 GO:0051276 GO:0051292 GO:0051640 GO:0051641 GO:0051649 GO:0051704 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1902446 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903508 GO:1990841 GO:1990904 GO:2000030 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03013 ko05164 map03013 map05164
Pfam Domains
Protein Families
Nucleoporin2

Protein Analysis

1016

Amino Acids

105.22

Weight (kDa)

6.89

Isoelectric Point (pI)

57.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nup98_GLEBS PF21240 368 - 387 3.4e-06 Nup98, Gle2-binding sequence
Nucleoporin2 PF04096 856 - 1002 2.3e-44 Nup98-96 autopeptidase S59
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1435
Acc36I ACCTGC 5 cut(s) 1435, 1921, 2035, 2101, 2818
Acc65I GGTACC 2 cut(s) 443, 785
AccB1I GGYRCC 5 cut(s) 134, 443, 785, 2709, 2930
AccB7I CCANNNNNTGG 9 cut(s) 275, 311, 425, 506, 578, 761, 986, 1016, 2599
AccI GTMKAC 4 cut(s) 290, 2474, 2867, 2982
AccII CGCG 1 cut(s) 1943
AciI CCGC 5 cut(s) 348, 896, 1199, 1941, 2018
AclWI GGATC 5 cut(s) 694, 730, 2090, 2331, 2344
AcoI YGGCCR 4 cut(s) 535, 559, 859, 1450
AcsI RAATTY 2 cut(s) 1998, 2310
AcuI CTGAAG 7 cut(s) 1721, 1741, 1759, 2294, 2846, 2927, 2974
AcyI GRCGYC 1 cut(s) 2710
AdeI CACNNNGTG 1 cut(s) 2486
AfeI AGCGCT 1 cut(s) 592
AjnI CCWGG 4 cut(s) 547, 1807, 2192, 2623
AleI CACNNNNGTG 1 cut(s) 2991
AloI GAACNNNNNNTCC 2 cut(s) 691, 723
Alw21I GWGCWC 6 cut(s) 283, 545, 634, 802, 850, 2212
Alw26I GTCTC 5 cut(s) 936, 1191, 1467, 2690, 2947
Alw44I GTGCAC 1 cut(s) 279
AlwI GGATC 5 cut(s) 694, 730, 2090, 2331, 2344
AlwNI CAGNNNCTG 3 cut(s) 689, 1703, 1913
Ama87I CYCGRG 1 cut(s) 2226
Aor51HI AGCGCT 1 cut(s) 592
AoxI GGCC 8 cut(s) 535, 559, 582, 859, 1021, 1450, 2237, 2916
ApaLI GTGCAC 1 cut(s) 279
ApeKI GCWGC 6 cut(s) 75, 1892, 2321, 2507, 2603, 3035
ApoI RAATTY 2 cut(s) 1998, 2310
ArsI GACNNNNNNTTYG 2 cut(s) 1219, 1251
Asp700I GAANNNNTTC 1 cut(s) 2311
Asp718I GGTACC 2 cut(s) 443, 785
AspLEI GCGC 5 cut(s) 593, 919, 946, 2032, 2712
AspS9I GGNCC 6 cut(s) 51, 582, 1021, 1181, 2467, 2876
AsuC2I CCSGG 1 cut(s) 1508
AsuHPI GGTGA 8 cut(s) 588, 1359, 1377, 1434, 1473, 2513, 2705, 2777
AvaI CYCGRG 1 cut(s) 2226
AvaII GGWCC 4 cut(s) 51, 1181, 2467, 2876
BaeGI GKGCMC 3 cut(s) 139, 283, 2493
BalI TGGCCA 4 cut(s) 537, 561, 861, 1452
BamHI GGATCC 1 cut(s) 2336
BanI GGYRCC 5 cut(s) 134, 443, 785, 2709, 2930
BanII GRGCYC 3 cut(s) 20, 967, 2586
BauI CACGAG 1 cut(s) 1136
BbsI GAAGAC 1 cut(s) 2858
Bbv12I GWGCWC 6 cut(s) 283, 545, 634, 802, 850, 2212
BbvCI CCTCAGC 1 cut(s) 2814
BbvI GCAGC 6 cut(s) 87, 1904, 2333, 2494, 2615, 3022
BceAI ACGGC 1 cut(s) 913
BcgI CGANNNNNNTGC 2 cut(s) 348, 382
BciT130I CCWGG 4 cut(s) 549, 1809, 2194, 2625
BclI TGATCA 1 cut(s) 2446
BcnI CCSGG 1 cut(s) 1508
BcoDI GTCTC 5 cut(s) 936, 1191, 1467, 2690, 2947
BfaI CTAG 2 cut(s) 771, 1743
BfmI CTRYAG 1 cut(s) 1890
BfoI RGCGCY 2 cut(s) 594, 2713
BfuAI ACCTGC 5 cut(s) 1435, 1921, 2035, 2101, 2818
BglI GCCNNNNNGGC 1 cut(s) 581
BisI GCNGC 7 cut(s) 76, 897, 1893, 2322, 2508, 2604, 3036
BlpI GCTNAGC 1 cut(s) 775
BlsI GCNGC 7 cut(s) 77, 898, 1894, 2323, 2509, 2605, 3037
BmcAI AGTACT 3 cut(s) 616, 640, 1636
Bme1390I CCNGG 5 cut(s) 549, 1508, 1809, 2194, 2625
Bme18I GGWCC 4 cut(s) 51, 1181, 2467, 2876
BmeT110I CYCGRG 1 cut(s) 2226
BmgT120I GGNCC 6 cut(s) 51, 582, 1021, 1181, 2467, 2876
BmrFI CCNGG 5 cut(s) 549, 1508, 1809, 2194, 2625
BmrI ACTGGG 4 cut(s) 49, 1691, 2865, 3031
BmsI GCATC 7 cut(s) 266, 326, 1439, 1935, 2850, 2892, 3022
BmuI ACTGGG 4 cut(s) 49, 1691, 2865, 3031
BoxI GACNNNNGTC 1 cut(s) 2068
BpiI GAAGAC 1 cut(s) 2858
BplI GAGNNNNNCTC 4 cut(s) 361, 393, 2310, 2342
BpmI CTGGAG 4 cut(s) 252, 555, 1449, 2274
Bpu10I CCTNAGC 1 cut(s) 2814
Bpu1102I GCTNAGC 1 cut(s) 775
BpuEI CTTGAG 2 cut(s) 1866, 2741
BpuMI CCSGG 1 cut(s) 1508
BsaHI GRCGYC 1 cut(s) 2710
BsaJI CCNNGG 8 cut(s) 547, 562, 1506, 2169, 2192, 2193, 2624, 2919
BsaWI WCCGGW 1 cut(s) 320
Bse3DI GCAATG 1 cut(s) 1116
BseBI CCWGG 4 cut(s) 549, 1809, 2194, 2625
BseDI CCNNGG 8 cut(s) 547, 562, 1506, 2169, 2192, 2193, 2624, 2919
BseMI GCAATG 1 cut(s) 1116
BseMII CTCAG 7 cut(s) 789, 980, 1742, 1964, 2247, 2337, 2805
BseRI GAGGAG 2 cut(s) 1154, 2049
BseSI GKGCMC 3 cut(s) 139, 283, 2493
BseXI GCAGC 6 cut(s) 87, 1904, 2333, 2494, 2615, 3022
BseYI CCCAGC 3 cut(s) 105, 499, 1803
BsgI GTGCAG 3 cut(s) 1236, 1962, 2753
Bsh1236I CGCG 1 cut(s) 1943
BshFI GGCC 8 cut(s) 537, 561, 584, 861, 1023, 1452, 2239, 2918
BshNI GGYRCC 5 cut(s) 134, 443, 785, 2709, 2930
BsiHKAI GWGCWC 6 cut(s) 283, 545, 634, 802, 850, 2212
BsiHKCI CYCGRG 1 cut(s) 2226
BsiSI CCGG 4 cut(s) 321, 620, 1508, 2080
BslFI GGGAC 4 cut(s) 37, 712, 2208, 2480
BsmAI GTCTC 5 cut(s) 936, 1191, 1467, 2690, 2947
BsmBI CGTCTC 3 cut(s) 936, 1191, 1467
BsmFI GGGAC 4 cut(s) 37, 712, 2208, 2480
BsnI GGCC 8 cut(s) 537, 561, 584, 861, 1023, 1452, 2239, 2918
BsoBI CYCGRG 1 cut(s) 2226
Bsp1407I TGTACA 2 cut(s) 1222, 1897
Bsp143I GATC 6 cut(s) 686, 722, 2082, 2336, 2446, 2716
Bsp1720I GCTNAGC 1 cut(s) 775
BspACI CCGC 5 cut(s) 348, 896, 1199, 1941, 2018
BspANI GGCC 8 cut(s) 537, 561, 584, 861, 1023, 1452, 2239, 2918
BspCNI CTCAG 7 cut(s) 788, 979, 1741, 1963, 2248, 2338, 2806
BspFNI CGCG 1 cut(s) 1943
BspMAI CTGCAG 1 cut(s) 1894
BspMI ACCTGC 5 cut(s) 1435, 1921, 2035, 2101, 2818
BspPI GGATC 5 cut(s) 694, 730, 2090, 2331, 2344
BspT107I GGYRCC 5 cut(s) 134, 443, 785, 2709, 2930
BsrDI GCAATG 1 cut(s) 1116
BsrGI TGTACA 2 cut(s) 1222, 1897
BssECI CCNNGG 8 cut(s) 547, 562, 1506, 2169, 2192, 2193, 2624, 2919
BssMI GATC 6 cut(s) 686, 722, 2082, 2336, 2446, 2716
BssNAI GTATAC 2 cut(s) 2475, 2868
BssNI GRCGYC 1 cut(s) 2710
BssSI CACGAG 1 cut(s) 1136
BssT1I CCWWGG 2 cut(s) 562, 2169
Bst1107I GTATAC 2 cut(s) 2475, 2868
Bst2BI CACGAG 1 cut(s) 1136
Bst2UI CCWGG 4 cut(s) 549, 1809, 2194, 2625
Bst4CI ACNGT 6 cut(s) 1185, 1222, 1389, 1566, 2235, 2765
Bst6I CTCTTC 3 cut(s) 1740, 2903, 2958
BstACI GRCGYC 1 cut(s) 2710
BstAPI GCANNNNNTGC 2 cut(s) 278, 1436
BstAUI TGTACA 2 cut(s) 1222, 1897
BstC8I GCNNGC 8 cut(s) 225, 348, 477, 756, 1011, 1116, 1840, 2009
BstFNI CGCG 1 cut(s) 1943
BstH2I RGCGCY 2 cut(s) 594, 2713
BstHHI GCGC 5 cut(s) 593, 919, 946, 2032, 2712
BstKTI GATC 6 cut(s) 689, 725, 2085, 2339, 2449, 2719
BstMAI GTCTC 5 cut(s) 936, 1191, 1467, 2690, 2947
BstMBI GATC 6 cut(s) 686, 722, 2082, 2336, 2446, 2716
BstNI CCWGG 4 cut(s) 549, 1809, 2194, 2625
BstNSI RCATGY 1 cut(s) 2011
BstPAI GACNNNNGTC 1 cut(s) 2068
BstSCI CCNGG 5 cut(s) 547, 1506, 1807, 2192, 2623
BstSFI CTRYAG 1 cut(s) 1890
BstSLI GKGCMC 3 cut(s) 139, 283, 2493
BstUI CGCG 1 cut(s) 1943
BstV1I GCAGC 6 cut(s) 87, 1904, 2333, 2494, 2615, 3022
BstV2I GAAGAC 1 cut(s) 2858
BstX2I RGATCY 2 cut(s) 686, 2336
BstXI CCANNNNNNTGG 3 cut(s) 113, 1031, 2303
BstYI RGATCY 2 cut(s) 686, 2336
BstZ17I GTATAC 2 cut(s) 2475, 2868
BsuRI GGCC 8 cut(s) 537, 561, 584, 861, 1023, 1452, 2239, 2918
BtgZI GCGATG 1 cut(s) 1958
BtsI GCAGTG 1 cut(s) 993
BtsIMutI CAGTG 5 cut(s) 993, 2146, 2240, 2270, 2998
BveI ACCTGC 5 cut(s) 1435, 1921, 2035, 2101, 2818
Cac8I GCNNGC 8 cut(s) 225, 348, 477, 756, 1011, 1116, 1840, 2009
CaiI CAGNNNCTG 3 cut(s) 689, 1703, 1913
CfoI GCGC 5 cut(s) 593, 919, 946, 2032, 2712
Cfr13I GGNCC 6 cut(s) 51, 582, 1021, 1181, 2467, 2876
CseI GACGC 1 cut(s) 2571
CspCI CAANNNNNGTGG 4 cut(s) 112, 147, 511, 546
CviAII CATG 7 cut(s) 2008, 2297, 2408, 2441, 2525, 2666, 2977
DinI GGCGCC 1 cut(s) 2711
DpnI GATC 6 cut(s) 688, 724, 2084, 2338, 2448, 2718
DpnII GATC 6 cut(s) 686, 722, 2082, 2336, 2446, 2716
DraI TTTAAA 1 cut(s) 2403
DraIII CACNNNGTG 1 cut(s) 2486
EaeI YGGCCR 4 cut(s) 535, 559, 859, 1450
Eam1104I CTCTTC 3 cut(s) 1740, 2903, 2958
EarI CTCTTC 3 cut(s) 1740, 2903, 2958
Eco130I CCWWGG 2 cut(s) 562, 2169
Eco24I GRGCYC 3 cut(s) 20, 967, 2586
Eco47I GGWCC 4 cut(s) 51, 1181, 2467, 2876
Eco47III AGCGCT 1 cut(s) 592
Eco57I CTGAAG 7 cut(s) 1721, 1741, 1759, 2294, 2846, 2927, 2974
Eco88I CYCGRG 1 cut(s) 2226
EcoO109I RGGNCCY 2 cut(s) 51, 2467
EcoRII CCWGG 4 cut(s) 547, 1807, 2192, 2623
EcoT14I CCWWGG 2 cut(s) 562, 2169
EcoT22I ATGCAT 1 cut(s) 2843
EcoT38I GRGCYC 3 cut(s) 20, 967, 2586
EgeI GGCGCC 1 cut(s) 2711
EheI GGCGCC 1 cut(s) 2711
ErhI CCWWGG 2 cut(s) 562, 2169
Esp3I CGTCTC 3 cut(s) 936, 1191, 1467
FaeI CATG 7 cut(s) 2011, 2300, 2411, 2444, 2528, 2669, 2980
FaqI GGGAC 4 cut(s) 37, 712, 2208, 2480
FatI CATG 7 cut(s) 2007, 2296, 2407, 2440, 2524, 2665, 2976
FauI CCCGC 3 cut(s) 355, 1192, 1948
FbaI TGATCA 1 cut(s) 2446
FblI GTMKAC 4 cut(s) 290, 2474, 2867, 2982
Fnu4HI GCNGC 7 cut(s) 76, 897, 1893, 2322, 2508, 2604, 3036
FriOI GRGCYC 3 cut(s) 20, 967, 2586
Fsp4HI GCNGC 7 cut(s) 76, 897, 1893, 2322, 2508, 2604, 3036
FspBI CTAG 2 cut(s) 771, 1743
GlaI GCGC 5 cut(s) 592, 918, 945, 2031, 2711
GluI GCNGC 7 cut(s) 76, 897, 1893, 2322, 2508, 2604, 3036
GsaI CCCAGC 3 cut(s) 109, 503, 1807
GsuI CTGGAG 4 cut(s) 252, 555, 1449, 2274
HaeII RGCGCY 2 cut(s) 594, 2713
HaeIII GGCC 8 cut(s) 537, 561, 584, 861, 1023, 1452, 2239, 2918
HapII CCGG 4 cut(s) 321, 620, 1508, 2080
HgaI GACGC 1 cut(s) 2571
HhaI GCGC 5 cut(s) 593, 919, 946, 2032, 2712
Hin1I GRCGYC 1 cut(s) 2710
Hin1II CATG 7 cut(s) 2011, 2300, 2411, 2444, 2528, 2669, 2980
Hin6I GCGC 5 cut(s) 591, 917, 944, 2030, 2710
HinP1I GCGC 5 cut(s) 591, 917, 944, 2030, 2710
HincII GTYRAC 2 cut(s) 972, 2983
HindII GTYRAC 2 cut(s) 972, 2983
HinfI GANTC 6 cut(s) 370, 1097, 1240, 1600, 2056, 2589
HpaII CCGG 4 cut(s) 321, 620, 1508, 2080
HphI GGTGA 8 cut(s) 588, 1359, 1377, 1434, 1473, 2513, 2705, 2777
Hpy188III TCNNGA 6 cut(s) 1136, 1720, 2053, 2316, 2720, 2845
Hpy99I CGWCG 2 cut(s) 1462, 2565
HpyAV CCTTC 6 cut(s) 1347, 1783, 2638, 2867, 2908, 2953
HpyCH4III ACNGT 6 cut(s) 1185, 1222, 1389, 1566, 2235, 2765
HpyCH4IV ACGT 3 cut(s) 326, 1457, 2972
HpySE526I ACGT 3 cut(s) 326, 1457, 2972
Hsp92I GRCGYC 1 cut(s) 2710
Hsp92II CATG 7 cut(s) 2011, 2300, 2411, 2444, 2528, 2669, 2980
HspAI GCGC 5 cut(s) 591, 917, 944, 2030, 2710
KasI GGCGCC 1 cut(s) 2709
KflI GGGWCCC 2 cut(s) 51, 2467
KpnI GGTACC 2 cut(s) 447, 789
Ksp22I TGATCA 1 cut(s) 2446
Kzo9I GATC 6 cut(s) 686, 722, 2082, 2336, 2446, 2716
Lsp1109I GCAGC 6 cut(s) 87, 1904, 2333, 2494, 2615, 3022
LweI GCATC 7 cut(s) 266, 326, 1439, 1935, 2850, 2892, 3022
MaeI CTAG 2 cut(s) 771, 1743
MaeII ACGT 3 cut(s) 326, 1457, 2972
MaeIII GTNAC 7 cut(s) 86, 1042, 1133, 1354, 2041, 2070, 2818
MalI GATC 6 cut(s) 688, 724, 2084, 2338, 2448, 2718
MboI GATC 6 cut(s) 686, 722, 2082, 2336, 2446, 2716
MfeI CAATTG 2 cut(s) 1959, 2511
MflI RGATCY 2 cut(s) 686, 2336
MlsI TGGCCA 4 cut(s) 537, 561, 861, 1452
MluNI TGGCCA 4 cut(s) 537, 561, 861, 1452
Mly113I GGCGCC 1 cut(s) 2710
MlyI GAGTC 3 cut(s) 379, 1106, 2050
MmeI TCCRAC 3 cut(s) 735, 2364, 2584
Mox20I TGGCCA 4 cut(s) 537, 561, 861, 1452
Mph1103I ATGCAT 1 cut(s) 2843
MroXI GAANNNNTTC 1 cut(s) 2311
MscI TGGCCA 4 cut(s) 537, 561, 861, 1452
MseI TTAA 8 cut(s) 1287, 1533, 1794, 2391, 2402, 2682, 2802, 2835
MslI CAYNNNNRTG 3 cut(s) 2301, 2670, 2991
Msp20I TGGCCA 4 cut(s) 537, 561, 861, 1452
MspA1I CMGCKG 1 cut(s) 1895
MspI CCGG 4 cut(s) 321, 620, 1508, 2080
MspR9I CCNGG 5 cut(s) 549, 1508, 1809, 2194, 2625
MunI CAATTG 2 cut(s) 1959, 2511
MvaI CCWGG 4 cut(s) 549, 1809, 2194, 2625
MvnI CGCG 1 cut(s) 1943
NarI GGCGCC 1 cut(s) 2710
NciI CCSGG 1 cut(s) 1508
NdeII GATC 6 cut(s) 686, 722, 2082, 2336, 2446, 2716
NlaIII CATG 7 cut(s) 2011, 2300, 2411, 2444, 2528, 2669, 2980
NmeAIII GCCGAG 1 cut(s) 2944
NmuCI GTSAC 3 cut(s) 1042, 1133, 2070
NsiI ATGCAT 1 cut(s) 2843
NspI RCATGY 1 cut(s) 2011
OliI CACNNNNGTG 1 cut(s) 2991
PaeI GCATGC 1 cut(s) 2011
PaqCI CACCTGC 1 cut(s) 1435
PasI CCCWGGG 1 cut(s) 2193
PcsI WCGNNNNNNNCGW 1 cut(s) 1940
PdmI GAANNNNTTC 1 cut(s) 2311
PfeI GAWTC 3 cut(s) 1240, 1600, 2589
PflMI CCANNNNNTGG 9 cut(s) 275, 311, 425, 506, 578, 761, 986, 1016, 2599
PkrI GCNGC 7 cut(s) 77, 898, 1894, 2323, 2509, 2605, 3037
PleI GAGTC 3 cut(s) 378, 1105, 2050
PluTI GGCGCC 1 cut(s) 2713
PpsI GAGTC 3 cut(s) 378, 1105, 2050
PpuMI RGGWCCY 2 cut(s) 51, 2467
PshAI GACNNNNGTC 1 cut(s) 2068
Psp5II RGGWCCY 2 cut(s) 51, 2467
Psp6I CCWGG 4 cut(s) 547, 1807, 2192, 2623
PspFI CCCAGC 3 cut(s) 105, 499, 1803
PspGI CCWGG 4 cut(s) 547, 1807, 2192, 2623
PspPI GGNCC 6 cut(s) 51, 582, 1021, 1181, 2467, 2876
PspPPI RGGWCCY 2 cut(s) 51, 2467
PstI CTGCAG 1 cut(s) 1894
PstNI CAGNNNCTG 3 cut(s) 689, 1703, 1913
PsuI RGATCY 2 cut(s) 686, 2336
PvuII CAGCTG 1 cut(s) 1895
RseI CAYNNNNRTG 3 cut(s) 2301, 2670, 2991
SalI GTCGAC 1 cut(s) 2981
SaqAI TTAA 8 cut(s) 1287, 1533, 1794, 2391, 2402, 2682, 2802, 2835
SatI GCNGC 7 cut(s) 76, 897, 1893, 2322, 2508, 2604, 3036
Sau3AI GATC 6 cut(s) 686, 722, 2082, 2336, 2446, 2716
Sau96I GGNCC 6 cut(s) 51, 582, 1021, 1181, 2467, 2876
ScaI AGTACT 3 cut(s) 616, 640, 1636
SchI GAGTC 3 cut(s) 379, 1106, 2050
ScrFI CCNGG 5 cut(s) 549, 1508, 1809, 2194, 2625
SfaNI GCATC 7 cut(s) 266, 326, 1439, 1935, 2850, 2892, 3022
SfcI CTRYAG 1 cut(s) 1890
SfoI GGCGCC 1 cut(s) 2711
SinI GGWCC 4 cut(s) 51, 1181, 2467, 2876
SmiI ATTTAAAT 1 cut(s) 2403
SmiMI CAYNNNNRTG 3 cut(s) 2301, 2670, 2991
SmlI CTYRAG 2 cut(s) 1881, 2720
SmoI CTYRAG 2 cut(s) 1881, 2720
SphI GCATGC 1 cut(s) 2011
SsiI CCGC 5 cut(s) 348, 896, 1199, 1941, 2018
SspDI GGCGCC 1 cut(s) 2709
SspMI CTAG 2 cut(s) 771, 1743
StyD4I CCNGG 5 cut(s) 547, 1506, 1807, 2192, 2623
StyI CCWWGG 2 cut(s) 562, 2169
SwaI ATTTAAAT 1 cut(s) 2403
TaaI ACNGT 6 cut(s) 1185, 1222, 1389, 1566, 2235, 2765
TaiI ACGT 3 cut(s) 329, 1460, 2975
TaqI TCGA 5 cut(s) 368, 1966, 2062, 2844, 2982
TatI WGTACW 8 cut(s) 608, 614, 638, 1222, 1634, 1897, 2437, 2997
TauI GCSGC 1 cut(s) 899
TfiI GAWTC 3 cut(s) 1240, 1600, 2589
Tru1I TTAA 8 cut(s) 1287, 1533, 1794, 2391, 2402, 2682, 2802, 2835
Tru9I TTAA 8 cut(s) 1287, 1533, 1794, 2391, 2402, 2682, 2802, 2835
TscAI CASTG 5 cut(s) 1000, 2146, 2240, 2277, 2998
TseFI GTSAC 3 cut(s) 1042, 1133, 2070
TseI GCWGC 6 cut(s) 75, 1892, 2321, 2507, 2603, 3035
Tsp45I GTSAC 3 cut(s) 1042, 1133, 2070
TspDTI ATGAA 8 cut(s) 204, 891, 1350, 1389, 1485, 1647, 2163, 2965
TspRI CASTG 5 cut(s) 1000, 2146, 2240, 2277, 2998
Van91I CCANNNNNTGG 9 cut(s) 275, 311, 425, 506, 578, 761, 986, 1016, 2599
VneI GTGCAC 1 cut(s) 279
VpaK11BI GGWCC 4 cut(s) 51, 1181, 2467, 2876
XapI RAATTY 2 cut(s) 1998, 2310
XceI RCATGY 1 cut(s) 2011
XcmI CCANNNNNNNNNTGG 2 cut(s) 62, 545
XmiI GTMKAC 4 cut(s) 290, 2474, 2867, 2982
XmnI GAANNNNTTC 1 cut(s) 2311
XspI CTAG 2 cut(s) 771, 1743
ZrmI AGTACT 3 cut(s) 616, 640, 1636
Zsp2I ATGCAT 1 cut(s) 2843
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.