Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003782

Physical Location & Seq

Genomic Coordinates Reverse (-)

4948638 .. 4953284

Gene Structure 4647 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G14460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3351 bp

ATGTCGGGTTTAAGGATTTCGGATCCGAGCAAATTGCATCTGAAGAAGGAGCTTACTCATATCAGGAAAGTTGCTTCTAAAGGTTTACGCGATCCTGGAACCACTTCCTCATGGAAATCTCCTCTTACTTCCTCGAGATTCGTCGTTGAGCCGCCGGCGAGCAACAACGTCGAGATTCTCAGTAACAATCAGTTAGATTCTCAGTTTCCGAGTAGTCGAGTCTTTGGGAATAACGGGAAGGAGAAGGAGAAGAAGGTGTTTTTGTATAATTGGAAGACTCAGAGAACTTCAAGCGAGAAGACTGAGGGTGAAGATGAAACGTCTTGGATCCAAGCTAGTCTCAATGATGATGATGACGATGATGATGATGTGAGTGACGCGAGGAATGGTGGAGATTCGTGTCTTGAGGAAACTCGATCTGCTTCGATGATTCGAAAGAGTGGTTTTATCAAGAAGAAGAGTAAGGAATTGGATTTGAGTATCGGAAGAAAAAGCACTGCGAAAGCTAGGAACTTTCCAAGTCATCATCTTCACGTTGCATCAGGTTTAAGTGTAGTGAGAGATGAATCTGATGAAACAGAGGATTTTAGCAACTCTGAGAATTTCCCCACTAAAGTATCATCTCCTTTGCTTTTGAAACTAAAGCGCAAGAACTGGTCACGTTCTTCTTCTAAGTTCCTGAGAGGTACTAGTAAGAGAGAGGATTCTTCTCATACTTGTAACAGTACACCTGCATTGTCGACTAGCTCATATAATATGTATGGTATCCGTAATCCTAGCACTGTTGGATCTTGGGAGGATGGTGATGATGAGTTGGATGATGATAACTTGGATTTTAAAGGGAGACAAGGTTGTGGGATTCCTTTTTATTGGACTAAGAGGAATCTGAAACATAGAGGTGGATGTAGGAGTTGTTGCTCTCCTTCGTTTTCGGATACTCTTAGGAGGAAAGGAAGTAGCATTTTATGTGGGAGTCAATCTGTGTATCGTAGACATAGGCATTCCTCTGGGAGGTTTAATAAACAGAAGCTTGCTTTAAGAAGTGCAAAAGGTGTTTTACCTTTGCTCAAATATGGTGGTGATAGTAGAGGAGGGTCATCTATAGGAATTGGGTATAGTGATGATGATCTTTCTACTGATTTTGGAGAGATTGATTTAGAAGCTCAGAGTAGATTAGATGGGAGGAGATGGTCTAGTTGTTGTAAGAGTCAGGATGGAGAAAGAGAAGAAGAGGAAGAAGGAGGAAGTACACCGGAAAGTATTCAGAGCTTGAGCCAAAAGTACAAGCCAATGTTCTTTGATGAACTGATTGGGCAGAGTATAGTTGTTCAATCACTAATGAACGCTGTGAAGAAGGGTAGGGTTGCTCATGTTTATCTTTTCCAAGGTCCTAGAGGTACTGGGAAGACATCTACCGCGAGAATTCTTTCGGCCGCCTTGAATTGTGATGTGGTCACTGAAGAAATGAAACCTTGTGGGTACTGCAAAGAATGTAGTGATTACATGCTAGGGAAAAGTAGGGATTTATTGGAACTTGATGCTGGTAAGAAGAATGGAGCCGAGAAAGTTAGGTACCTTTTGAAAAAATTGTTGACATTAGCTCCTCAGAGTTCTCAAAGATACAAGGTTTTTGTTATAGATGAGTGTCATTTATTACCATCTAGGACTTGGCTATCTTTACTCAAGTTTCTTGAGAACCCTCTGCAGAAATTTGTCTTTGTATGTATCACGACTGACCTTGACAATGTTCCTCGGACCATTCAGTCAAGGTGCCAGAAGTACATCTTCAACAAAGTCAGAGATGGTGACATTGTTGTGAGACTAAGGAAGATTGCTTCAGATGAAAATCTAGATGTGGAATCACAGGCGTTGGACCTGATTGCTTTGAATGCTGATGGCTCGCTTCGAGATGCTGAAACCATGTTAGAGCAGTTGAGTTTGATGGGAAAACGAATCACCGTTGATCTTGTAAATGAGCTTGTTGGTGTTGTTTCAGATGATAAATTGCTTGAACTCTTGGAATTAGCGTTGTCTTCTGACACGGCAGAGACCGTTAAGAAAGCTAGAGAGTTACTGGACTTGGGAGCTGATCCAATACTCATGATGTCTCAACTAGCCAGTCTTATCATGGATATCATTGCTGGAGCATACAAGGCTTTGGACGAAAAATACAGCGAAGCCTTTCTTGATAGAAGGAACTTGACTGAAGCGGATTTGGAGAGACTAAAGCATGCTTTGAAACTTCTTTCTGAGGCTGAGAAGCAGCTTAGAGTTTCTACTGATCGTTCAACATGGTTCATAGCTACCTTGCTTCAGCTTGGTTCAATGCCTTCTCCTGGAACCACACATACCGGTAGCAGTAGAAGGCAAAGCTCTAGAGCAACTGAAGAAAGCATTTCAAGAGAAGTTATTGCTTACAAACAGAGATCAGGCCTTCAATGTAGTAATACAGCCTCCCCAACTTCCATAAGAAAAAGTGGAAACCTCGTTCGTGAAGTGAAATTGTCCTCCTCTTCTAGCGAAGTTTTAGAGAGTGACACTTCCATGGCCTCACATGACGATACAACGGCAAGCACCATGACGCTTACTTGCAGAAATTCAGAGAAACTAAATGATATTTGGATAAAGTGTGTAGATAGATGTCATTCAAAGACATTGAAGCAGCTTCTATATGCTCATGGGAAGCTTTTATCTATCAGTGAAGTTGAAGGTATTCTAGTTGCTTATATTGCATTTGGAGAAGGAGAGATCAAAGCGAGAGCTGAAAGGTTTGTAAGCAGTATCACAAACTCGATTGAAATGGTACTACGGCGAAACGTAGAGGTCAGGATAATCCTCTTGTCTGAAACTGAGTTACTCAACTCCAAGCAGACCAGACAAATAGCAGTGACAACTAGTTCATATACTGAAAGTGGGAATGAGATTCCAATGAAAAGGATTGAAGCAATCATCCAAGAACAGAGATTAGAAACTGAGTGGTTACAGAAGACTCCTGGTTCACAAGGCCGGTTAAAACCCGAAAGGAACCAAATTCTACCTCAAGAAGACACCAATGGAGTTAAAGTCTTGAAGATTTGTGAAATGGGTGAGTTTCAGGAGAATCAGAGTGGTAAAAGAATGGAACATTGTCCTGTTTCTCCAAGCTTACTACACAATAGTAACTTCACAAACAACAAAGACAATCTAGGATATGAATCAGAATCAGGGAGAGGAGTTTGCAGTCTGCTTTTCTGTTGGAACACACAAAAGTCTCCAAGAAGAACCAAAATCAAAGGGACTTCTATGCGATCACGAAGAAGTCGAGAGAGACGTTTCTCCTTGTTCAGTGCATGTGCTAGGCCAAGGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005663 GO:0005694 GO:0005886 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009653 GO:0009888 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0016020 GO:0016043 GO:0030154 GO:0032502 GO:0032989 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0046483 GO:0048468 GO:0048856 GO:0048869 GO:0050896 GO:0051716 GO:0071704 GO:0071840 GO:0071944 GO:0090304 GO:0090558 GO:0090626 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DNA_pol3_delta2 DNA_pol3_gamma3

Protein Analysis

1116

Amino Acids

124.89

Weight (kDa)

8.81

Isoelectric Point (pI)

50.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_pol3_delta2	PF13177	439 - 598	5.4e-30	DNA polymerase III, delta subunit
AAA	PF00004	460 - 596	2.3e-10	ATPase family associated with various cellular activities (AAA)
DNAX_ATPase_lid	PF22608	604 - 645	3e-08	DNA polymerase III clamp loader subunit, ATPase lid domain
DNA_pol3_gamma3	PF12169	653 - 775	2.6e-07	DNA polymerase III subunits gamma and tau domain III
DnaA_N-like_STI	PF23007	863 - 946	8.7e-31	STICHEL, DnaA_N-like alpha-beta domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003782)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14460 AT2G02480 AT2G02480
fragaria_vesca	FvH4_5g27450 FvH4_5g27450
malus_domestica	MD08G1249500.v1.1
prunus_persica	Prupe.1G586700_v2.0.a1 Prupe.1G586700_v2.0.a1 Prupe.1G586700_v2.0.a1 Prupe.1G586700_v2.0.a1 Prupe.1G586700_v2.0.a1
pyrus_communis	pycom08g21590
rosa_chinensis	RchiOBHm_Chr2g0146641 RchiOBHm_Chr7g0218871
rosa_laevigata	RLG00000001635 RLG00000002346 RLG00000002355
rosa_multiflora	Rmu_sc0003823.1_g000001 Rmu_sc0006998.1_g000001
rosa_roxburghii	Rroxscaffold_3G00240440
rosa_rugosa	Rorug07G0179300
rosa_samantha	Rh3AG021300 Rh3CG020600 Rh5BG537900 Rh5CG561800 Rh7AG322600 Rh7BG313700 Rh7CG339400 Rh7DG319800 Rh7DG389400
rosa_wichuraiana	Rw5G027500 Rw7G026930 Rw7G027310 Rw7G028430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	739
AasI	GACNNNNNNGTC	1 cut(s)	1762
Acc36I	ACCTGC	1 cut(s)	739
Acc65I	GGTACC	1 cut(s)	1572
AccB1I	GGYRCC	2 cut(s)	1572, 1770
AccI	GTMKAC	2 cut(s)	740, 991
AccII	CGCG	3 cut(s)	90, 380, 1418
AciI	CCGC	4 cut(s)	152, 1416, 1434, 2210
AclWI	GGATC	7 cut(s)	17, 30, 86, 322, 335, 796, 2084
AcoI	YGGCCR	1 cut(s)	1431
AcsI	RAATTY	5 cut(s)	601, 1422, 1709, 2596, 3030
AcuI	CTGAAG	6 cut(s)	62, 1479, 1821, 2226, 2297, 2406
AfaI	GTAC	9 cut(s)	688, 727, 1249, 1283, 1399, 1481, 1574, 1781, 2805
AfiI	CCNNNNNNNGG	2 cut(s)	1011, 2336
AgeI	ACCGGT	1 cut(s)	2351
AhlI	ACTAGT	2 cut(s)	689, 2894
AjnI	CCWGG	3 cut(s)	94, 2335, 2992
AloI	GAACNNNNNNTCC	2 cut(s)	2472, 2504
Alw26I	GTCTC	8 cut(s)	344, 838, 1813, 2042, 2112, 2215, 3255, 3301
AlwI	GGATC	7 cut(s)	17, 30, 86, 322, 335, 796, 2084
Ama87I	CYCGRG	1 cut(s)	133
AoxI	GGCC	5 cut(s)	1431, 2431, 2547, 3004, 3338
ApeKI	GCWGC	2 cut(s)	2263, 2662
ApoI	RAATTY	5 cut(s)	601, 1422, 1709, 2596, 3030
AsiGI	ACCGGT	1 cut(s)	2351
Asp700I	GAANNNNTTC	5 cut(s)	103, 1260, 1426, 2181, 2712
Asp718I	GGTACC	1 cut(s)	1572
AspLEI	GCGC	1 cut(s)	648
AspS9I	GGNCC	3 cut(s)	1388, 1755, 1873
AsuHPI	GGTGA	6 cut(s)	320, 815, 1091, 1817, 1948, 3098
AsuII	TTCGAA	1 cut(s)	433
AvaI	CYCGRG	1 cut(s)	133
AvaII	GGWCC	3 cut(s)	1388, 1755, 1873
BaeI	ACNNNNGTAYC	2 cut(s)	600, 633
BamHI	GGATCC	2 cut(s)	22, 327
BanI	GGYRCC	2 cut(s)	1572, 1770
BbsI	GAAGAC	6 cut(s)	281, 305, 1412, 2025, 2993, 3051
BbvI	GCAGC	2 cut(s)	2275, 2674
BccI	CCATC	8 cut(s)	794, 1172, 1182, 1208, 1666, 1796, 1889, 1936
BceAI	ACGGC	3 cut(s)	2058, 2583, 2825
BcgI	CGANNNNNNTGC	4 cut(s)	16, 50, 151, 185
BciT130I	CCWGG	3 cut(s)	96, 2337, 2994
BciVI	GTATCC	2 cut(s)	776, 928
BcoDI	GTCTC	8 cut(s)	344, 838, 1813, 2042, 2112, 2215, 3255, 3301
BcuI	ACTAGT	2 cut(s)	689, 2894
BfmI	CTRYAG	2 cut(s)	1101, 1703
BfuAI	ACCTGC	1 cut(s)	739
BfuI	GTATCC	2 cut(s)	776, 928
BisI	GCNGC	4 cut(s)	152, 1434, 2264, 2663
BlsI	GCNGC	4 cut(s)	153, 1435, 2265, 2664
Bme1390I	CCNGG	3 cut(s)	96, 2337, 2994
Bme18I	GGWCC	3 cut(s)	1388, 1755, 1873
BmeT110I	CYCGRG	1 cut(s)	133
BmgT120I	GGNCC	3 cut(s)	1388, 1755, 1873
BmiI	GGNNCC	8 cut(s)	24, 100, 329, 1558, 1574, 1772, 2341, 3026
BmrFI	CCNGG	3 cut(s)	96, 2337, 2994
BmrI	ACTGGG	1 cut(s)	1410
BmsI	GCATC	4 cut(s)	46, 548, 1528, 1900
BmuI	ACTGGG	1 cut(s)	1410
BpiI	GAAGAC	6 cut(s)	281, 305, 1412, 2025, 2993, 3051
BpmI	CTGGAG	1 cut(s)	2163
Bpu14I	TTCGAA	1 cut(s)	433
BpuEI	CTTGAG	5 cut(s)	425, 1291, 1667, 1712, 3024
BsaBI	GATNNNNATC	3 cut(s)	1125, 1845, 3193
BsaI	GGTCTC	1 cut(s)	2042
BsaJI	CCNNGG	4 cut(s)	1384, 1751, 2544, 3341
BsaWI	WCCGGW	2 cut(s)	1252, 2351
BsaXI	ACNNNNNCTCC	6 cut(s)	835, 865, 1585, 1615, 3048, 3078
Bsc4I	CCNNNNNNNGG	2 cut(s)	1011, 2336
Bse118I	RCCGGY	3 cut(s)	154, 2351, 3006
Bse1I	ACTGG	4 cut(s)	659, 1405, 2079, 2118
Bse3DI	GCAATG	1 cut(s)	2136
Bse8I	GATNNNNATC	3 cut(s)	1125, 1845, 3193
BseBI	CCWGG	3 cut(s)	96, 2337, 2994
BseDI	CCNNGG	4 cut(s)	1384, 1751, 2544, 3341
BseGI	GGATG	5 cut(s)	805, 823, 908, 1219, 2949
BseJI	GATNNNNATC	3 cut(s)	1125, 1845, 3193
BseLI	CCNNNNNNNGG	2 cut(s)	1011, 2336
BseMI	GCAATG	1 cut(s)	2136
BseNI	ACTGG	4 cut(s)	659, 1405, 2079, 2118
BseRI	GAGGAG	6 cut(s)	111, 1104, 1198, 1593, 2500, 3225
BseX3I	CGGCCG	1 cut(s)	1431
BseXI	GCAGC	2 cut(s)	2275, 2674
Bsh1236I	CGCG	3 cut(s)	90, 380, 1418
Bsh1285I	CGRYCG	1 cut(s)	1434
BshFI	GGCC	5 cut(s)	1433, 2433, 2549, 3006, 3340
BshNI	GGYRCC	2 cut(s)	1572, 1770
BshTI	ACCGGT	1 cut(s)	2351
BsiEI	CGRYCG	1 cut(s)	1434
BsiHKCI	CYCGRG	1 cut(s)	133
BsiSI	CCGG	4 cut(s)	155, 1253, 2352, 3007
BslFI	GGGAC	1 cut(s)	3289
BslI	CCNNNNNNNGG	2 cut(s)	1011, 2336
BsmAI	GTCTC	8 cut(s)	344, 838, 1813, 2042, 2112, 2215, 3255, 3301
BsmBI	CGTCTC	1 cut(s)	3301
BsmFI	GGGAC	1 cut(s)	3289
BsmI	GAATGC	2 cut(s)	1000, 1894
BsnI	GGCC	5 cut(s)	1433, 2433, 2549, 3006, 3340
Bso31I	GGTCTC	1 cut(s)	2042
BsoBI	CYCGRG	1 cut(s)	133
Bsp119I	TTCGAA	1 cut(s)	433
Bsp19I	CCATGG	1 cut(s)	2544
BspACI	CCGC	4 cut(s)	152, 1416, 1434, 2210
BspANI	GGCC	5 cut(s)	1433, 2433, 2549, 3006, 3340
BspFNI	CGCG	3 cut(s)	90, 380, 1418
BspHI	TCATGA	1 cut(s)	2100
BspLI	GGNNCC	8 cut(s)	24, 100, 329, 1558, 1574, 1772, 2341, 3026
BspMAI	CTGCAG	1 cut(s)	1707
BspMI	ACCTGC	1 cut(s)	739
BspPI	GGATC	7 cut(s)	17, 30, 86, 322, 335, 796, 2084
BspT104I	TTCGAA	1 cut(s)	433
BspT107I	GGYRCC	2 cut(s)	1572, 1770
BspTNI	GGTCTC	1 cut(s)	2042
BsrDI	GCAATG	1 cut(s)	2136
BsrFI	RCCGGY	3 cut(s)	154, 2351, 3006
BsrI	ACTGG	4 cut(s)	659, 1405, 2079, 2118
BssAI	RCCGGY	3 cut(s)	154, 2351, 3006
BssECI	CCNNGG	4 cut(s)	1384, 1751, 2544, 3341
BssT1I	CCWWGG	3 cut(s)	1384, 2544, 3341
Bst2UI	CCWGG	3 cut(s)	96, 2337, 2994
Bst4CI	ACNGT	4 cut(s)	725, 784, 1960, 2053
Bst6I	CTCTTC	3 cut(s)	452, 1224, 2518
BstBI	TTCGAA	1 cut(s)	433
BstC8I	GCNNGC	6 cut(s)	156, 160, 1032, 1901, 2232, 2572
BstDSI	CCRYGG	1 cut(s)	2544
BstENI	CCTNNNNNAGG	1 cut(s)	1009
BstF5I	GGATG	5 cut(s)	805, 823, 908, 1219, 2949
BstFNI	CGCG	3 cut(s)	90, 380, 1418
BstHHI	GCGC	1 cut(s)	648
BstMAI	GTCTC	8 cut(s)	344, 838, 1813, 2042, 2112, 2215, 3255, 3301
BstMCI	CGRYCG	1 cut(s)	1434
BstMWI	GCNNNNNNNGC	3 cut(s)	1889, 2153, 2729
BstNI	CCWGG	3 cut(s)	96, 2337, 2994
BstNSI	RCATGY	3 cut(s)	1507, 2234, 3333
BstSCI	CCNGG	3 cut(s)	94, 2335, 2992
BstSFI	CTRYAG	2 cut(s)	1101, 1703
BstUI	CGCG	3 cut(s)	90, 380, 1418
BstV1I	GCAGC	2 cut(s)	2275, 2674
BstV2I	GAAGAC	6 cut(s)	281, 305, 1412, 2025, 2993, 3051
BstX2I	RGATCY	3 cut(s)	22, 327, 788
BstYI	RGATCY	3 cut(s)	22, 327, 788
BstZI	CGGCCG	1 cut(s)	1431
BsuI	GTATCC	2 cut(s)	776, 928
BsuRI	GGCC	5 cut(s)	1433, 2433, 2549, 3006, 3340
BtgI	CCRYGG	1 cut(s)	2544
BtsCI	GGATG	5 cut(s)	805, 823, 908, 1219, 2949
BtsI	GCAGTG	2 cut(s)	495, 2892
BtsIMutI	CAGTG	6 cut(s)	495, 780, 1455, 2704, 2892, 3331
BveI	ACCTGC	1 cut(s)	739
Cac8I	GCNNGC	6 cut(s)	156, 160, 1032, 1901, 2232, 2572
CciI	TCATGA	1 cut(s)	2100
CfoI	GCGC	1 cut(s)	648
Cfr10I	RCCGGY	3 cut(s)	154, 2351, 3006
Cfr13I	GGNCC	3 cut(s)	1388, 1755, 1873
CseI	GACGC	2 cut(s)	386, 2590
Csp6I	GTAC	9 cut(s)	687, 726, 1248, 1282, 1398, 1480, 1573, 1780, 2804
CspAI	ACCGGT	1 cut(s)	2351
CspCI	CAANNNNNGTGG	2 cut(s)	1057, 1092
CviQI	GTAC	9 cut(s)	687, 726, 1248, 1282, 1398, 1480, 1573, 1780, 2804
DraI	TTTAAA	1 cut(s)	838
DrdI	GACNNNNNNGTC	1 cut(s)	1762
DseDI	GACNNNNNNGTC	1 cut(s)	1762
EaeI	YGGCCR	1 cut(s)	1431
EagI	CGGCCG	1 cut(s)	1431
Eam1104I	CTCTTC	3 cut(s)	452, 1224, 2518
EarI	CTCTTC	3 cut(s)	452, 1224, 2518
EclXI	CGGCCG	1 cut(s)	1431
Eco130I	CCWWGG	3 cut(s)	1384, 2544, 3341
Eco147I	AGGCCT	1 cut(s)	2433
Eco31I	GGTCTC	1 cut(s)	2042
Eco32I	GATATC	1 cut(s)	2134
Eco47I	GGWCC	3 cut(s)	1388, 1755, 1873
Eco52I	CGGCCG	1 cut(s)	1431
Eco57I	CTGAAG	6 cut(s)	62, 1479, 1821, 2226, 2297, 2406
Eco88I	CYCGRG	1 cut(s)	133
EcoNI	CCTNNNNNAGG	1 cut(s)	1009
EcoO109I	RGGNCCY	1 cut(s)	1388
EcoRI	GAATTC	1 cut(s)	1422
EcoRII	CCWGG	3 cut(s)	94, 2335, 2992
EcoRV	GATATC	1 cut(s)	2134
EcoT14I	CCWWGG	3 cut(s)	1384, 2544, 3341
ErhI	CCWWGG	3 cut(s)	1384, 2544, 3341
Esp3I	CGTCTC	1 cut(s)	3301
FalI	AAGNNNNNCTT	4 cut(s)	1769, 1801, 2169, 2201
FaqI	GGGAC	1 cut(s)	3289
FblI	GTMKAC	2 cut(s)	740, 991
Fnu4HI	GCNGC	4 cut(s)	152, 1434, 2264, 2663
FokI	GGATG	5 cut(s)	812, 830, 915, 1226, 2936
Fsp4HI	GCNGC	4 cut(s)	152, 1434, 2264, 2663
GlaI	GCGC	1 cut(s)	647
GluI	GCNGC	4 cut(s)	152, 1434, 2264, 2663
GsuI	CTGGAG	1 cut(s)	2163
HaeIII	GGCC	5 cut(s)	1433, 2433, 2549, 3006, 3340
HapII	CCGG	4 cut(s)	155, 1253, 2352, 3007
HgaI	GACGC	2 cut(s)	386, 2590
HhaI	GCGC	1 cut(s)	648
Hin6I	GCGC	1 cut(s)	646
HinP1I	GCGC	1 cut(s)	646
HincII	GTYRAC	2 cut(s)	741, 1593
HindII	GTYRAC	2 cut(s)	741, 1593
HindIII	AAGCTT	3 cut(s)	1028, 2684, 3142
HpaII	CCGG	4 cut(s)	155, 1253, 2352, 3007
HphI	GGTGA	6 cut(s)	320, 815, 1091, 1817, 1948, 3098
Hpy166II	GTNNAC	7 cut(s)	86, 728, 741, 992, 1250, 1593, 2999
Hpy8I	GTNNAC	7 cut(s)	86, 728, 741, 992, 1250, 1593, 2999
Hpy99I	CGWCG	2 cut(s)	146, 173
HpyCH4III	ACNGT	4 cut(s)	725, 784, 1960, 2053
HpyCH4IV	ACGT	6 cut(s)	168, 320, 534, 661, 2817, 3310
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1889, 2153, 2729
HpySE526I	ACGT	6 cut(s)	168, 320, 534, 661, 2817, 3310
HspAI	GCGC	1 cut(s)	646
KpnI	GGTACC	1 cut(s)	1576
KroI	GCCGGC	1 cut(s)	154
KroNI	GCCGGC	1 cut(s)	156
LmnI	GCTCC	5 cut(s)	49, 1556, 1606, 2084, 2144
Lsp1109I	GCAGC	2 cut(s)	2275, 2674
LweI	GCATC	4 cut(s)	46, 548, 1528, 1900
MaeII	ACGT	6 cut(s)	168, 320, 534, 661, 2817, 3310
MflI	RGATCY	3 cut(s)	22, 327, 788
MlyI	GAGTC	5 cut(s)	228, 271, 982, 1216, 2983
MmeI	TCCRAC	4 cut(s)	766, 795, 1851, 3215
MreI	CGCCGGCG	1 cut(s)	154
MroNI	GCCGGC	1 cut(s)	154
MroXI	GAANNNNTTC	5 cut(s)	103, 1260, 1426, 2181, 2712
MseI	TTAA	8 cut(s)	11, 548, 837, 1017, 1037, 2055, 3011, 3060
MslI	CAYNNNNRTG	3 cut(s)	897, 1814, 2543
MspI	CCGG	4 cut(s)	155, 1253, 2352, 3007
MspR9I	CCNGG	3 cut(s)	96, 2337, 2994
Mva1269I	GAATGC	2 cut(s)	1000, 1894
MvaI	CCWGG	3 cut(s)	96, 2337, 2994
MvnI	CGCG	3 cut(s)	90, 380, 1418
MwoI	GCNNNNNNNGC	3 cut(s)	1889, 2153, 2729
NaeI	GCCGGC	1 cut(s)	156
NcoI	CCATGG	1 cut(s)	2544
NgoMIV	GCCGGC	1 cut(s)	154
NlaIV	GGNNCC	8 cut(s)	24, 100, 329, 1558, 1574, 1772, 2341, 3026
NmeAIII	GCCGAG	1 cut(s)	1585
NmuCI	GTSAC	6 cut(s)	374, 657, 1453, 1805, 2534, 2887
NspI	RCATGY	3 cut(s)	1507, 2234, 3333
NspV	TTCGAA	1 cut(s)	433
PaeI	GCATGC	1 cut(s)	2234
PaeR7I	CTCGAG	1 cut(s)	133
PagI	TCATGA	1 cut(s)	2100
PaqCI	CACCTGC	1 cut(s)	739
PceI	AGGCCT	1 cut(s)	2433
PcsI	WCGNNNNNNNCGW	2 cut(s)	3298, 3307
PctI	GAATGC	2 cut(s)	1000, 1894
PdiI	GCCGGC	1 cut(s)	156
PdmI	GAANNNNTTC	5 cut(s)	103, 1260, 1426, 2181, 2712
PfoI	TCCNGGA	2 cut(s)	94, 2335
PinAI	ACCGGT	1 cut(s)	2351
PkrI	GCNGC	4 cut(s)	153, 1435, 2265, 2664
PleI	GAGTC	5 cut(s)	227, 271, 981, 1215, 2983
PpsI	GAGTC	5 cut(s)	227, 271, 981, 1215, 2983
PpuMI	RGGWCCY	1 cut(s)	1388
Psp5II	RGGWCCY	1 cut(s)	1388
Psp6I	CCWGG	3 cut(s)	94, 2335, 2992
PspGI	CCWGG	3 cut(s)	94, 2335, 2992
PspN4I	GGNNCC	8 cut(s)	24, 100, 329, 1558, 1574, 1772, 2341, 3026
PspPI	GGNCC	3 cut(s)	1388, 1755, 1873
PspPPI	RGGWCCY	1 cut(s)	1388
PsrI	GAACNNNNNNTAC	2 cut(s)	2332, 2364
PstI	CTGCAG	1 cut(s)	1707
PsuI	RGATCY	3 cut(s)	22, 327, 788
RsaI	GTAC	9 cut(s)	688, 727, 1249, 1283, 1399, 1481, 1574, 1781, 2805
RsaNI	GTAC	9 cut(s)	687, 726, 1248, 1282, 1398, 1480, 1573, 1780, 2804
RseI	CAYNNNNRTG	3 cut(s)	897, 1814, 2543
SalI	GTCGAC	1 cut(s)	739
SaqAI	TTAA	8 cut(s)	11, 548, 837, 1017, 1037, 2055, 3011, 3060
SatI	GCNGC	4 cut(s)	152, 1434, 2264, 2663
Sau96I	GGNCC	3 cut(s)	1388, 1755, 1873
SchI	GAGTC	5 cut(s)	228, 271, 982, 1216, 2983
ScrFI	CCNGG	3 cut(s)	96, 2337, 2994
SfaNI	GCATC	4 cut(s)	46, 548, 1528, 1900
SfcI	CTRYAG	2 cut(s)	1101, 1703
Sfr274I	CTCGAG	1 cut(s)	133
SfuI	TTCGAA	1 cut(s)	433
SgrAI	CRCCGGYG	1 cut(s)	154
SinI	GGWCC	3 cut(s)	1388, 1755, 1873
SlaI	CTCGAG	1 cut(s)	133
SmiMI	CAYNNNNRTG	3 cut(s)	897, 1814, 2543
SmlI	CTYRAG	6 cut(s)	133, 404, 1270, 1682, 1691, 3039
SmoI	CTYRAG	6 cut(s)	133, 404, 1270, 1682, 1691, 3039
SpeI	ACTAGT	2 cut(s)	689, 2894
SphI	GCATGC	1 cut(s)	2234
SseBI	AGGCCT	1 cut(s)	2433
SsiI	CCGC	4 cut(s)	152, 1416, 1434, 2210
StuI	AGGCCT	1 cut(s)	2433
StyD4I	CCNGG	3 cut(s)	94, 2335, 2992
StyI	CCWWGG	3 cut(s)	1384, 2544, 3341
TaaI	ACNGT	4 cut(s)	725, 784, 1960, 2053
TaiI	ACGT	6 cut(s)	171, 323, 537, 664, 2820, 3313
TatI	WGTACW	4 cut(s)	725, 1247, 1281, 1779
TauI	GCSGC	2 cut(s)	154, 1436
Tru1I	TTAA	8 cut(s)	11, 548, 837, 1017, 1037, 2055, 3011, 3060
Tru9I	TTAA	8 cut(s)	11, 548, 837, 1017, 1037, 2055, 3011, 3060
TscAI	CASTG	6 cut(s)	502, 787, 1462, 2704, 2892, 3331
TseFI	GTSAC	6 cut(s)	374, 657, 1453, 1805, 2534, 2887
TseI	GCWGC	2 cut(s)	2263, 2662
Tsp45I	GTSAC	6 cut(s)	374, 657, 1453, 1805, 2534, 2887
TspGWI	ACGGA	1 cut(s)	758
TspRI	CASTG	6 cut(s)	502, 787, 1462, 2704, 2892, 3331
VpaK11BI	GGWCC	3 cut(s)	1388, 1755, 1873
XagI	CCTNNNNNAGG	1 cut(s)	1009
XapI	RAATTY	5 cut(s)	601, 1422, 1709, 2596, 3030
XbaI	TCTAGA	2 cut(s)	1849, 2375
XceI	RCATGY	3 cut(s)	1507, 2234, 3333
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1665, 2125
XhoI	CTCGAG	1 cut(s)	133
XmiI	GTMKAC	2 cut(s)	740, 991
XmnI	GAANNNNTTC	5 cut(s)	103, 1260, 1426, 2181, 2712

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.