Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003782

Physical Location & Seq

Genomic Coordinates Forward (+)

660655 .. 665635

Gene Structure 4981 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G02480.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3657 bp

ATGTCAGGTTCGAGAGTTTCGGATCTGAGTAAATTGCATCTGAAGAAGGAGCTGACTCAAATCAGAAAAGCTGGCCGTGTTTTACGCGATCCAGGTACTACTTCCTCCTGGAAATCTCCTCTCGATTCGTCAAGATCCGTCGCGCTTTTGGAGACTCCGGCGAGCAGAAACGGTGGCAGTTCGAGTCAGTTTCCGATTCGAGGAGAGAGTAGTACTAATCGTCGTGGGAAAGAGAAGAAGGTGTTTTTGTATAACTGGAAGACTCAGAAATCTTCTAGTGAGAAAAGTGGATTAGCTAAGAATGGTAAGGAAGAAGAGGAAGAAGAAGAAGATGCTTCTTCGTGGACGCAAGCTAGTGTTAATGATGATGATGATGTGAGTGATGCGAGGAATGGTGGTGATTCGTATCGTAGAGAAATACAATCAGCTTCGATGGGTTTTAGGTGTAGAGATACGAATCTAGCGTCACAAGGTGTGTCAAAGATGAGGAAGAGTAATGTTGGTAGTTGTAAGAAGAAGAGTAAGAAAAAAATTAGCTCTTCTCGTTTGGATTGTTTGTCAAAGTATCAACCTAGAGATGACATTGTTGCTAGAAATTGTAATGCTGGATCAGATGACACAGAGGAGGAATTGAGTAATTCAGAGGATTTGAGGAAGGTCACTGGTGCGTCTCCTTTGCTTTTGAAGCTTAAGCAGAAGAACTGGTCACGTTCTTCGTCAAGATTGTTGAGAGCTAATAATAGAAAAGAGGATTCTTCATGTACTTATAATAGTACACCGGCTTTATCCACTAGTTCGTACAATATGTATGCTGTTCGTAATCCCAGCACTGTTGGATCTTGGGATGGTACCACGACTTCGGTGAATGATGGTGATGATGAGTTGGATGATAACTTGGATTTACCAGGGAGGCAAGGATGTGGTATTCCGTGTTATTGGACGAAGAAGGCGATGAAACATAGAGGCGGATGCAGAAGTTGTTGCTCTCCATCGTTTTCGGATACTTTGAGAAGAACCGGAAGTAGCATTTTGTGTGGGAGTCAATCTGTGTATCGTAGACATAATAGACATTCTTCTGGAGGGTATAGTAAACAAAAAATTGCTTGTAGAAGTGCACAAGGTGTTTTACCTTTACTCAGTTACGGTGGTGATGGTAGAGGAGGGTCTTCTTTAGGAACCGGGCTTAGTGATGATGAGCTTTCTACCAATTATGGAGAGCTTGATTTAGAGGCTCAGAGTAGATTAGACGGGAGGAGGTGGTCTACTAGTTATAGGAGTCAAGATGGTTTGGAGGCTGTAGCGTTAGATGGAGAAGAAGAAGAAGGAAGTACACCGGAAACAATCCGAAGCTTCAGCCAAAAGTACAGACCAATGTTTTTTGAGGAATTGATTGGACAAAGTATAGTGGTTCAATCGTTAATGAACGCTGTTAAAAGGAGTAGGATCGCTCCTGTTTATCTTTTCCAGGGTCCTAGAGGAACTGGTAAAACATCAACCGCAAGGATTTTTTCAGCCGCCCTGAATTGTGTGGCCACTGAAGAAATGAAGCCTTGTGGGTACTGTAAAGAGTGCAATGATTTCATGTCTGGGAAAAGTAAGGATTTTTGGGAACTTGATGGAGCTAATAAGAAGGGAGCTGATAAGGTTAGGTACCTTTTAAAAAACCTACCGACGATACTTCCACGAAATTCCTCAATGTACAAGGTTTTTGTGATAGACGAGTGTCATTTGCTGCCATCGAAGACGTGGCTGTCTTTTCTTAAGTTTCTTGAAAACCCTCTGCAGAAAGTTGTCTTCATATTTATAACTACTGACCTTGAAAATGTTCCCCGGACCATTCAGTCAAGGTGCCAGAAGTTTCTCTTTGACAAACTCAAAGATTCTGACATAGTAGTGAGACTAAAGAAAATTGCTTCAGACGAAAATCTTGATGTAGACTTGCATGCGTTGGACCTGATTGCTATGAACGCGGATGGCTCACTTCGAGATGCTGAAACTATGTTGGAGCAGCTGAGTTTGCTGGGAAAACGCATCACCACAGCTTTAGTAAACGAGCTAGTTGGTGTTGTTTCAGATGAAAAATTGTTGGAACTCTTGGAATTAGCATTGTCTTCTGACACAGCAGAGACTGTTAAGCGAGCTAGAGAGTTGTTGGACCTTGGAGCTGACCCAATAGTCTTGATGTCTCAACTCGCCAGTCTTATTATGGATATCATTGCTGGTACATACAAGGTCGTAGATGAAAAATACAGCAACGCCTTCTTTGACGGAAGAAACTTGACTGAAGCAGATATGGAGGGATTAAAGCATGCTTTGAAACTTCTTTCTGAGGCTGAGAAGCAGCTGAGAGTTTCTAATGACCGTTCAACATGGTTCACAGCGACTTTGCTTCAGCTTGGGTCAATGCCTTCTCCTGGCACCACACATACAGGCAGTAGTAGAAGGCAAAGCTCTAGAGCAACTGACGATGACCCAGCAAGCGTTTCAAGGGAAGTGATGGCTTACAAACAGAGAATAGGAGGACTTCACTTTAGTAAGTCGGCATCTCCAGCTTCGGTTATAAAAAGGAACGGGAATCATTCCCATGAAGCGAAACCATTCTCCAGGGTTATCGATAATAACTGCTATAAATCCTCCTCATCTAGCCAAATGATAGAGAGCGAAGGTTCCATTGCCTCACATGAAAATAGCATCGCAAGCACCATGATGCTTAATCAAAGAAGTTCAGAGAAACTTAACGATATATGGAGAAAATGTATTGAAAGATGTCACTCAAAGACACTGAGGCAGCTGCTCTATACTCATGGGAAACTTATATCTATCAGTGAAGTTGAGGGTATTCTCGTTGCTTATATCGCGTTTGGAGAAAACGATATCAAACTGAGAGCTGAAAGGTTTCTAAGCAGTATCACAAACTCGATTGAAATGGTACTAAGGCGAAGCGTAGAGGTCAGGATAATTCTCTTGCCTGAAACCGAGTTACTCGTTGTCCCTCACCAAACCCGGAAACCAGAAATGACCAACAAAAGTGGGCATCTAAATAACATCGCTGGTTTAAATGCCGAAACAGATGTTGAAGTTGGTAGCAGCGTGGAAAGCAGATCAAAACTCCCGATGCAAAGGATAGAATCAATCATCAGAGAACAAAGATTAGAAACCGCTTGGTTACAAACCGCTGATAAAGACACACCTGGATCGATAATACGGGTAAAACCCGAAAGGAATCAGATTCTACCTCAAGAAGACACTTATCGCCAAACTAACGTAGCTTCTGCTATTTCTTCTTCTGGCCTAACCACTCACCAATGGGTAGATGAGCTAAACAATGAAGTTAAGCTTTTGAAAATCGGCGACAATGGTGAGCTTCAGGAGAATCTAACCGGTACAAGAGGACAGCATTGTCCTCTTTCCCCAAGCTTACTTCATGATACTAACTTCGGAAACAACAAAGACAATCTAGGAGGATACGAATCAGGATCAGGAAGAGTTGGTTGTAATATATTATTTTGTTGGAACACAAAAAAGACTCAGAGACGAAGCAAGTCGAAACAGGTCAAGGGAACTCCTGTTCGTTCGCGGAGAAATCGGAAGAGTCGGTTCTCTCTGTTTAATGGATGTGCTAAGCCAAGGAAAGCAGAAGGTAACATTAGAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0000904 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005663 GO:0005694 GO:0005886 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009653 GO:0009888 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0016020 GO:0016043 GO:0030154 GO:0032502 GO:0032989 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0046483 GO:0048468 GO:0048856 GO:0048869 GO:0050896 GO:0051716 GO:0071704 GO:0071840 GO:0071944 GO:0090304 GO:0090558 GO:0090626 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DNA_pol3_delta2 DNA_pol3_gamma3

Protein Analysis

1218

Amino Acids

135.3

Weight (kDa)

9.06

Isoelectric Point (pI)

49.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_pol3_delta2	PF13177	466 - 625	2.2e-30	DNA polymerase III, delta subunit
AAA	PF00004	487 - 621	5.2e-08	ATPase family associated with various cellular activities (AAA)
DNAX_ATPase_lid	PF22608	630 - 670	1.8e-07	DNA polymerase III clamp loader subunit, ATPase lid domain
DNA_pol3_gamma3	PF12169	679 - 799	3.4e-07	DNA polymerase III subunits gamma and tau domain III
DnaA_N-like_STI	PF23007	905 - 988	1.4e-31	STICHEL, DnaA_N-like alpha-beta domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003782)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14460 AT2G02480 AT2G02480
fragaria_vesca	FvH4_5g27450 FvH4_5g27450
malus_domestica	MD08G1249500.v1.1
prunus_persica	Prupe.1G586700_v2.0.a1 Prupe.1G586700_v2.0.a1 Prupe.1G586700_v2.0.a1 Prupe.1G586700_v2.0.a1 Prupe.1G586700_v2.0.a1
pyrus_communis	pycom08g21590
rosa_chinensis	RchiOBHm_Chr2g0146641 RchiOBHm_Chr7g0218871
rosa_laevigata	RLG00000001635 RLG00000002346 RLG00000002355
rosa_multiflora	Rmu_sc0003823.1_g000001 Rmu_sc0006998.1_g000001
rosa_roxburghii	Rroxscaffold_3G00240440
rosa_rugosa	Rorug07G0179300
rosa_samantha	Rh3AG021300 Rh3CG020600 Rh5BG537900 Rh5CG561800 Rh7AG322600 Rh7BG313700 Rh7CG339400 Rh7DG319800 Rh7DG389400
rosa_wichuraiana	Rw5G027500 Rw7G026930 Rw7G027310 Rw7G028430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	768, 1805, 2561
AasI	GACNNNNNNGTC	4 cut(s)	1750, 1840, 2174, 3399
Acc65I	GGTACC	2 cut(s)	848, 1650
AccB1I	GGYRCC	4 cut(s)	848, 1650, 1848, 2417
AccI	GTMKAC	3 cut(s)	1057, 1262, 1935
AccII	CGCG	5 cut(s)	87, 143, 1970, 2858, 3577
AciI	CCGC	7 cut(s)	966, 1497, 1515, 1970, 3159, 3174, 3577
AclWI	GGATC	8 cut(s)	30, 83, 129, 616, 844, 1451, 3202, 3484
AcoI	YGGCCR	2 cut(s)	73, 1530
AcsI	RAATTY	1 cut(s)	1687
AcuI	CTGAAG	7 cut(s)	62, 1336, 1557, 1899, 2304, 2375, 3350
AdeI	CACNNNGTG	2 cut(s)	473, 1121
AfiI	CCNNNNNNNGG	2 cut(s)	200, 2414
AflII	CTTAAG	2 cut(s)	689, 1760
AgeI	ACCGGT	1 cut(s)	3380
AhlI	ACTAGT	2 cut(s)	791, 1265
AjiI	CACGTC	1 cut(s)	1746
AjnI	CCWGG	7 cut(s)	91, 107, 904, 1464, 2413, 2603, 3190
AloI	GAACNNNNNNTCC	2 cut(s)	3552, 3584
Alw21I	GWGCWC	1 cut(s)	1117
Alw26I	GTCTC	6 cut(s)	146, 675, 1891, 2120, 2190, 3526
Alw44I	GTGCAC	1 cut(s)	1113
AlwI	GGATC	8 cut(s)	30, 83, 129, 616, 844, 1451, 3202, 3484
AlwNI	CAGNNNCTG	1 cut(s)	2129
AoxI	GGCC	3 cut(s)	73, 1530, 3289
ApaLI	GTGCAC	1 cut(s)	1113
ApeKI	GCWGC	6 cut(s)	1732, 2008, 2341, 2788, 2791, 3087
ApoI	RAATTY	1 cut(s)	1687
ArsI	GACNNNNNNTTYG	2 cut(s)	449, 481
AsiGI	ACCGGT	1 cut(s)	3380
Asp700I	GAANNNNTTC	3 cut(s)	1824, 2597, 2895
Asp718I	GGTACC	2 cut(s)	848, 1650
AspLEI	GCGC	1 cut(s)	145
AspS9I	GGNCC	4 cut(s)	1469, 1833, 1951, 2155
AsuC2I	CCSGG	3 cut(s)	1180, 1831, 3004
AsuHPI	GGTGA	8 cut(s)	410, 874, 884, 1160, 2026, 2987, 3293, 3371
AvaII	GGWCC	4 cut(s)	1469, 1833, 1951, 2155
BaeGI	GKGCMC	1 cut(s)	1117
BalI	TGGCCA	1 cut(s)	1532
BanI	GGYRCC	4 cut(s)	848, 1650, 1848, 2417
BarI	GAAGNNNNNNTAC	2 cut(s)	841, 873
BbsI	GAAGAC	6 cut(s)	266, 1158, 1748, 1786, 2103, 3249
Bbv12I	GWGCWC	1 cut(s)	1117
BbvI	GCAGC	6 cut(s)	1719, 2020, 2353, 2778, 2800, 3099
BceAI	ACGGC	1 cut(s)	60
BciT130I	CCWGG	7 cut(s)	93, 109, 906, 1466, 2415, 2605, 3192
BciVI	GTATCC	2 cut(s)	994, 3458
BcnI	CCSGG	3 cut(s)	1180, 1831, 3004
BcoDI	GTCTC	6 cut(s)	146, 675, 1891, 2120, 2190, 3526
BcuI	ACTAGT	2 cut(s)	791, 1265
BfmI	CTRYAG	2 cut(s)	1296, 1781
BfrI	CTTAAG	2 cut(s)	689, 1760
BfuI	GTATCC	2 cut(s)	994, 3458
BisI	GCNGC	7 cut(s)	1515, 1733, 2009, 2342, 2789, 2792, 3088
BlpI	GCTNAGC	1 cut(s)	3621
BlsI	GCNGC	7 cut(s)	1516, 1734, 2010, 2343, 2790, 2793, 3089
BmcAI	AGTACT	1 cut(s)	214
Bme18I	GGWCC	4 cut(s)	1469, 1833, 1951, 2155
BmgBI	CACGTC	1 cut(s)	1746
BmgT120I	GGNCC	4 cut(s)	1469, 1833, 1951, 2155
BmiI	GGNNCC	7 cut(s)	850, 1177, 1470, 1652, 1850, 2419, 2668
BoxI	GACNNNNGTC	1 cut(s)	1722
BpiI	GAAGAC	6 cut(s)	266, 1158, 1748, 1786, 2103, 3249
BpmI	CTGGAG	3 cut(s)	1098, 2532, 2587
Bpu1102I	GCTNAGC	1 cut(s)	3621
BpuEI	CTTGAG	1 cut(s)	3222
BpuMI	CCSGG	3 cut(s)	1180, 1831, 3004
Bsa29I	ATCGAT	2 cut(s)	2613, 3197
BsaBI	GATNNNNATC	3 cut(s)	405, 456, 3469
BsaJI	CCNNGG	6 cut(s)	905, 1465, 1829, 2158, 2604, 3626
BsaWI	WCCGGW	3 cut(s)	1016, 1333, 3380
BsaXI	ACNNNNNCTCC	2 cut(s)	2740, 2770
Bsc4I	CCNNNNNNNGG	2 cut(s)	200, 2414
Bse118I	RCCGGY	2 cut(s)	778, 3380
Bse1I	ACTGG	5 cut(s)	260, 667, 707, 1486, 2196
Bse3DI	GCAATG	3 cut(s)	1579, 2214, 2670
Bse8I	GATNNNNATC	3 cut(s)	405, 456, 3469
BseBI	CCWGG	7 cut(s)	93, 109, 906, 1466, 2415, 2605, 3192
BseCI	ATCGAT	2 cut(s)	2613, 3197
BseDI	CCNNGG	6 cut(s)	905, 1465, 1829, 2158, 2604, 3626
BseGI	GGATG	6 cut(s)	850, 892, 923, 974, 1978, 3620
BseJI	GATNNNNATC	3 cut(s)	405, 456, 3469
BseLI	CCNNNNNNNGG	2 cut(s)	200, 2414
BseMI	GCAATG	3 cut(s)	1579, 2214, 2670
BseNI	ACTGG	5 cut(s)	260, 667, 707, 1486, 2196
BseRI	GAGGAG	6 cut(s)	108, 216, 638, 1173, 1267, 2626
BseSI	GKGCMC	1 cut(s)	1117
BseXI	GCAGC	6 cut(s)	1719, 2020, 2353, 2778, 2800, 3099
BseYI	CCCAGC	3 cut(s)	824, 2020, 2473
Bsh1236I	CGCG	5 cut(s)	87, 143, 1970, 2858, 3577
BshFI	GGCC	3 cut(s)	75, 1532, 3291
BshNI	GGYRCC	4 cut(s)	848, 1650, 1848, 2417
BshTI	ACCGGT	1 cut(s)	3380
BshVI	ATCGAT	2 cut(s)	2613, 3197
BsiHKAI	GWGCWC	1 cut(s)	1117
BsiSI	CCGG	8 cut(s)	158, 779, 1017, 1179, 1334, 1831, 3004, 3381
BslFI	GGGAC	1 cut(s)	2975
BslI	CCNNNNNNNGG	2 cut(s)	200, 2414
BsmAI	GTCTC	6 cut(s)	146, 675, 1891, 2120, 2190, 3526
BsmBI	CGTCTC	2 cut(s)	675, 3526
BsmFI	GGGAC	1 cut(s)	2975
BsnI	GGCC	3 cut(s)	75, 1532, 3291
Bsp1286I	GDGCHC	1 cut(s)	1117
Bsp1407I	TGTACA	1 cut(s)	1698
Bsp143I	GATC	9 cut(s)	22, 88, 134, 608, 836, 1443, 3101, 3194, 3476
Bsp1720I	GCTNAGC	1 cut(s)	3621
BspACI	CCGC	7 cut(s)	966, 1497, 1515, 1970, 3159, 3174, 3577
BspANI	GGCC	3 cut(s)	75, 1532, 3291
BspDI	ATCGAT	2 cut(s)	2613, 3197
BspFNI	CGCG	5 cut(s)	87, 143, 1970, 2858, 3577
BspHI	TCATGA	1 cut(s)	3424
BspLI	GGNNCC	7 cut(s)	850, 1177, 1470, 1652, 1850, 2419, 2668
BspMAI	CTGCAG	1 cut(s)	1785
BspPI	GGATC	8 cut(s)	30, 83, 129, 616, 844, 1451, 3202, 3484
BspQI	GCTCTTC	1 cut(s)	544
BspT107I	GGYRCC	4 cut(s)	848, 1650, 1848, 2417
BspTI	CTTAAG	2 cut(s)	689, 1760
BsrDI	GCAATG	3 cut(s)	1579, 2214, 2670
BsrFI	RCCGGY	2 cut(s)	778, 3380
BsrGI	TGTACA	1 cut(s)	1698
BsrI	ACTGG	5 cut(s)	260, 667, 707, 1486, 2196
BssAI	RCCGGY	2 cut(s)	778, 3380
BssECI	CCNNGG	6 cut(s)	905, 1465, 1829, 2158, 2604, 3626
BssMI	GATC	9 cut(s)	22, 88, 134, 608, 836, 1443, 3101, 3194, 3476
BssT1I	CCWWGG	2 cut(s)	2158, 3626
Bst2UI	CCWGG	7 cut(s)	93, 109, 906, 1466, 2415, 2605, 3192
Bst4CI	ACNGT	6 cut(s)	173, 832, 1145, 1562, 2131, 2363
Bst6I	CTCTTC	6 cut(s)	309, 485, 512, 544, 3478, 3584
BstAFI	CTTAAG	2 cut(s)	689, 1760
BstAUI	TGTACA	1 cut(s)	1698
BstC8I	GCNNGC	8 cut(s)	73, 163, 351, 1944, 2139, 2310, 2479, 2698
BstF5I	GGATG	6 cut(s)	850, 892, 923, 974, 1978, 3620
BstFNI	CGCG	5 cut(s)	87, 143, 1970, 2858, 3577
BstHHI	GCGC	1 cut(s)	145
BstKTI	GATC	9 cut(s)	25, 91, 137, 611, 839, 1446, 3104, 3197, 3479
BstMAI	GTCTC	6 cut(s)	146, 675, 1891, 2120, 2190, 3526
BstMBI	GATC	9 cut(s)	22, 88, 134, 608, 836, 1443, 3101, 3194, 3476
BstMWI	GCNNNNNNNGC	7 cut(s)	685, 1967, 2017, 2549, 2697, 2855, 3096
BstNI	CCWGG	7 cut(s)	93, 109, 906, 1466, 2415, 2605, 3192
BstNSI	RCATGY	2 cut(s)	1946, 2312
BstPAI	GACNNNNGTC	1 cut(s)	1722
BstSFI	CTRYAG	2 cut(s)	1296, 1781
BstSLI	GKGCMC	1 cut(s)	1117
BstUI	CGCG	5 cut(s)	87, 143, 1970, 2858, 3577
BstV1I	GCAGC	6 cut(s)	1719, 2020, 2353, 2778, 2800, 3099
BstV2I	GAAGAC	6 cut(s)	266, 1158, 1748, 1786, 2103, 3249
BstX2I	RGATCY	3 cut(s)	22, 134, 836
BstYI	RGATCY	3 cut(s)	22, 134, 836
Bsu15I	ATCGAT	2 cut(s)	2613, 3197
BsuI	GTATCC	2 cut(s)	994, 3458
BsuRI	GGCC	3 cut(s)	75, 1532, 3291
BsuTUI	ATCGAT	2 cut(s)	2613, 3197
BtgZI	GCGATG	3 cut(s)	965, 2677, 3031
BtrI	CACGTC	1 cut(s)	1746
BtsCI	GGATG	6 cut(s)	850, 892, 923, 974, 1978, 3620
BtsIMutI	CAGTG	5 cut(s)	660, 828, 1533, 2780, 2830
Cac8I	GCNNGC	8 cut(s)	73, 163, 351, 1944, 2139, 2310, 2479, 2698
CaiI	CAGNNNCTG	1 cut(s)	2129
CciI	TCATGA	1 cut(s)	3424
CfoI	GCGC	1 cut(s)	145
Cfr10I	RCCGGY	2 cut(s)	778, 3380
Cfr13I	GGNCC	4 cut(s)	1469, 1833, 1951, 2155
ClaI	ATCGAT	2 cut(s)	2613, 3197
CseI	GACGC	3 cut(s)	355, 453, 657
CspAI	ACCGGT	1 cut(s)	3380
CspCI	CAANNNNNGTGG	2 cut(s)	3010, 3045
DpnI	GATC	9 cut(s)	24, 90, 136, 610, 838, 1445, 3103, 3196, 3478
DpnII	GATC	9 cut(s)	22, 88, 134, 608, 836, 1443, 3101, 3194, 3476
DraI	TTTAAA	2 cut(s)	1659, 3057
DraIII	CACNNNGTG	2 cut(s)	473, 1121
DrdI	GACNNNNNNGTC	4 cut(s)	1750, 1840, 2174, 3399
DseDI	GACNNNNNNGTC	4 cut(s)	1750, 1840, 2174, 3399
EaeI	YGGCCR	2 cut(s)	73, 1530
Eam1104I	CTCTTC	6 cut(s)	309, 485, 512, 544, 3478, 3584
EarI	CTCTTC	6 cut(s)	309, 485, 512, 544, 3478, 3584
EciI	GGCGGA	1 cut(s)	981
Eco130I	CCWWGG	2 cut(s)	2158, 3626
Eco32I	GATATC	2 cut(s)	2212, 2875
Eco47I	GGWCC	4 cut(s)	1469, 1833, 1951, 2155
Eco57I	CTGAAG	7 cut(s)	62, 1336, 1557, 1899, 2304, 2375, 3350
EcoO109I	RGGNCCY	1 cut(s)	1469
EcoRII	CCWGG	7 cut(s)	91, 107, 904, 1464, 2413, 2603, 3190
EcoRV	GATATC	2 cut(s)	2212, 2875
EcoT14I	CCWWGG	2 cut(s)	2158, 3626
ErhI	CCWWGG	2 cut(s)	2158, 3626
Esp3I	CGTCTC	2 cut(s)	675, 3526
FalI	AAGNNNNNCTT	4 cut(s)	1847, 1879, 3321, 3353
FaqI	GGGAC	1 cut(s)	2975
FblI	GTMKAC	3 cut(s)	1057, 1262, 1935
Fnu4HI	GCNGC	7 cut(s)	1515, 1733, 2009, 2342, 2789, 2792, 3088
FokI	GGATG	6 cut(s)	857, 899, 930, 981, 1985, 3627
Fsp4HI	GCNGC	7 cut(s)	1515, 1733, 2009, 2342, 2789, 2792, 3088
GlaI	GCGC	1 cut(s)	144
GluI	GCNGC	7 cut(s)	1515, 1733, 2009, 2342, 2789, 2792, 3088
GsaI	CCCAGC	3 cut(s)	828, 2024, 2477
GsuI	CTGGAG	3 cut(s)	1098, 2532, 2587
HaeIII	GGCC	3 cut(s)	75, 1532, 3291
HapII	CCGG	8 cut(s)	158, 779, 1017, 1179, 1334, 1831, 3004, 3381
HgaI	GACGC	3 cut(s)	355, 453, 657
HhaI	GCGC	1 cut(s)	145
Hin6I	GCGC	1 cut(s)	143
HinP1I	GCGC	1 cut(s)	143
HindIII	AAGCTT	4 cut(s)	686, 1348, 3335, 3415
HpaII	CCGG	8 cut(s)	158, 779, 1017, 1179, 1334, 1831, 3004, 3381
HphI	GGTGA	8 cut(s)	410, 874, 884, 1160, 2026, 2987, 3293, 3371
Hpy99I	CGWCG	3 cut(s)	143, 225, 1675
HpyCH4III	ACNGT	6 cut(s)	173, 832, 1145, 1562, 2131, 2363
HpyCH4IV	ACGT	3 cut(s)	709, 1745, 3264
HpyCH4V	TGCA	7 cut(s)	37, 972, 1115, 1572, 1783, 1942, 3118
HpyF10VI	GCNNNNNNNGC	7 cut(s)	685, 1967, 2017, 2549, 2697, 2855, 3096
HpySE526I	ACGT	3 cut(s)	709, 1745, 3264
HspAI	GCGC	1 cut(s)	143
KpnI	GGTACC	2 cut(s)	852, 1654
Kzo9I	GATC	9 cut(s)	22, 88, 134, 608, 836, 1443, 3101, 3194, 3476
LguI	GCTCTTC	1 cut(s)	544
LmnI	GCTCC	6 cut(s)	49, 1453, 1619, 1634, 2005, 2162
Lsp1109I	GCAGC	6 cut(s)	1719, 2020, 2353, 2778, 2800, 3099
MaeII	ACGT	3 cut(s)	709, 1745, 3264
MaeIII	GTNAC	8 cut(s)	465, 658, 705, 1139, 2768, 2979, 3165, 3641
MalI	GATC	9 cut(s)	24, 90, 136, 610, 838, 1445, 3103, 3196, 3478
MboI	GATC	9 cut(s)	22, 88, 134, 608, 836, 1443, 3101, 3194, 3476
MflI	RGATCY	3 cut(s)	22, 134, 836
MhlI	GDGCHC	1 cut(s)	1117
MlsI	TGGCCA	1 cut(s)	1532
MluNI	TGGCCA	1 cut(s)	1532
MlyI	GAGTC	8 cut(s)	49, 148, 193, 256, 1048, 1285, 3520, 3601
MmeI	TCCRAC	7 cut(s)	814, 864, 1929, 1983, 2067, 2133, 3491
Mox20I	TGGCCA	1 cut(s)	1532
MroXI	GAANNNNTTC	3 cut(s)	1824, 2597, 2895
MscI	TGGCCA	1 cut(s)	1532
MslI	CAYNNNNRTG	3 cut(s)	1892, 2583, 2705
Msp20I	TGGCCA	1 cut(s)	1532
MspA1I	CMGCKG	4 cut(s)	2011, 2344, 2791, 3176
MspCI	CTTAAG	2 cut(s)	689, 1760
MspI	CCGG	8 cut(s)	158, 779, 1017, 1179, 1334, 1831, 3004, 3381
MvaI	CCWGG	7 cut(s)	93, 109, 906, 1466, 2415, 2605, 3192
MvnI	CGCG	5 cut(s)	87, 143, 1970, 2858, 3577
MwoI	GCNNNNNNNGC	7 cut(s)	685, 1967, 2017, 2549, 2697, 2855, 3096
NciI	CCSGG	3 cut(s)	1180, 1831, 3004
NdeII	GATC	9 cut(s)	22, 88, 134, 608, 836, 1443, 3101, 3194, 3476
NlaIV	GGNNCC	7 cut(s)	850, 1177, 1470, 1652, 1850, 2419, 2668
NmuCI	GTSAC	4 cut(s)	465, 658, 705, 2768
NspI	RCATGY	2 cut(s)	1946, 2312
PaeI	GCATGC	2 cut(s)	1946, 2312
PagI	TCATGA	1 cut(s)	3424
PciSI	GCTCTTC	1 cut(s)	544
PcsI	WCGNNNNNNNCGW	2 cut(s)	461, 947
PdmI	GAANNNNTTC	3 cut(s)	1824, 2597, 2895
PfoI	TCCNGGA	1 cut(s)	107
PinAI	ACCGGT	1 cut(s)	3380
PkrI	GCNGC	7 cut(s)	1516, 1734, 2010, 2343, 2790, 2793, 3089
PleI	GAGTC	8 cut(s)	49, 148, 192, 256, 1047, 1284, 3520, 3600
PpsI	GAGTC	8 cut(s)	49, 148, 192, 256, 1047, 1284, 3520, 3600
PpuMI	RGGWCCY	1 cut(s)	1469
PshAI	GACNNNNGTC	1 cut(s)	1722
PsiI	TTATAA	3 cut(s)	768, 1805, 2561
Psp5II	RGGWCCY	1 cut(s)	1469
Psp6I	CCWGG	7 cut(s)	91, 107, 904, 1464, 2413, 2603, 3190
PspFI	CCCAGC	3 cut(s)	824, 2020, 2473
PspGI	CCWGG	7 cut(s)	91, 107, 904, 1464, 2413, 2603, 3190
PspN4I	GGNNCC	7 cut(s)	850, 1177, 1470, 1652, 1850, 2419, 2668
PspPI	GGNCC	4 cut(s)	1469, 1833, 1951, 2155
PspPPI	RGGWCCY	1 cut(s)	1469
PstI	CTGCAG	1 cut(s)	1785
PstNI	CAGNNNCTG	1 cut(s)	2129
PsuI	RGATCY	3 cut(s)	22, 134, 836
PvuII	CAGCTG	3 cut(s)	2011, 2344, 2791
RseI	CAYNNNNRTG	3 cut(s)	1892, 2583, 2705
SapI	GCTCTTC	1 cut(s)	544
SatI	GCNGC	7 cut(s)	1515, 1733, 2009, 2342, 2789, 2792, 3088
Sau3AI	GATC	9 cut(s)	22, 88, 134, 608, 836, 1443, 3101, 3194, 3476
Sau96I	GGNCC	4 cut(s)	1469, 1833, 1951, 2155
ScaI	AGTACT	1 cut(s)	214
SchI	GAGTC	8 cut(s)	49, 148, 193, 256, 1048, 1285, 3520, 3601
SduI	GDGCHC	1 cut(s)	1117
SfcI	CTRYAG	2 cut(s)	1296, 1781
SinI	GGWCC	4 cut(s)	1469, 1833, 1951, 2155
SmiMI	CAYNNNNRTG	3 cut(s)	1892, 2583, 2705
SmlI	CTYRAG	3 cut(s)	689, 1760, 3237
SmoI	CTYRAG	3 cut(s)	689, 1760, 3237
SpeI	ACTAGT	2 cut(s)	791, 1265
SphI	GCATGC	2 cut(s)	1946, 2312
SsiI	CCGC	7 cut(s)	966, 1497, 1515, 1970, 3159, 3174, 3577
StyI	CCWWGG	2 cut(s)	2158, 3626
TaaI	ACNGT	6 cut(s)	173, 832, 1145, 1562, 2131, 2363
TaiI	ACGT	3 cut(s)	712, 1748, 3267
TatI	WGTACW	6 cut(s)	212, 761, 773, 1328, 1362, 1698
TauI	GCSGC	1 cut(s)	1517
TscAI	CASTG	5 cut(s)	667, 835, 1540, 2787, 2830
TseFI	GTSAC	4 cut(s)	465, 658, 705, 2768
TseI	GCWGC	6 cut(s)	1732, 2008, 2341, 2788, 2791, 3087
Tsp45I	GTSAC	4 cut(s)	465, 658, 705, 2768
TspGWI	ACGGA	3 cut(s)	127, 918, 2283
TspRI	CASTG	5 cut(s)	667, 835, 1540, 2787, 2830
Vha464I	CTTAAG	2 cut(s)	689, 1760
VneI	GTGCAC	1 cut(s)	1113
VpaK11BI	GGWCC	4 cut(s)	1469, 1833, 1951, 2155
XapI	RAATTY	1 cut(s)	1687
XbaI	TCTAGA	1 cut(s)	2453
XceI	RCATGY	2 cut(s)	1946, 2312
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1743, 2203
XmiI	GTMKAC	3 cut(s)	1057, 1262, 1935
XmnI	GAANNNNTTC	3 cut(s)	1824, 2597, 2895
ZrmI	AGTACT	1 cut(s)	214

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.