AT1G30420

xenobiotic transmembrane transporting ATPase activity

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
10748261 .. 10756695
8435 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G30420.2

Sequence Viewer

Length: 4488 bp
ATGGGTTTTGAGGCATTGAATTGGTACTGCAAGCCAATTGCAGAAGGATTTTGGGAAAAAACACCGGATGGTGCGTTTGGTGCCTACACGCCGTGTGCCATTGACTCACTAGTGATGATTGTTTCTAACTCTGTACTTCTGGGTTTGTGTTTCTACCGGATATGGATCACCTTGTACAATGCCAAAGCTCAGATTTATGTTTTGAGGAAGATGTACTATCACTGTGTGCTATGGATATTGGCTTGTTGCTGTGTTGTTGAGCCTGTACTGAGATTAGTTATGGGGATTTCGCTTTTTGACATGGGTGATGAAACTGATCTTCCTCCCTTTGAGGTTGCATCCTTAATGGTTGAGGCATTTGCTTGGTTCGCCATGCTTGTTTTGATTGGACTTGAAACCAAACAATATGTCAAAGAGTTCCGATGGTACGTGAGATTTGGTGTTGTATATGTTTTGGTTGCTGATGCGGTGCTGCTGGACCTTGTGTTGCCTCTCAAGAACTCAATCAATAGAACTGCCCTATATCTCTGTATCAGTTCAAGATGTTGCCAGGCTCTTTTTGGAATCCTTCTACTTGTTTACATTCCTGAACTGGATCTTTATCCAGATTACCATATTCTAAACAATGAATCGTTAGACAATGTTGAATATGATGCACTGCCTGGGGGAGTGAACATATGTCCCGAGCGATATGCCAGCATATTTTCTGGAATATACTTTAGTTGGATGACGCCGCTTATGCAGTTAGGCTACAGAAAGCCTATTACTGAGAGGGATGTTTGGCAATTAGACCAATGGGACCAAACAGAAACTCTGATAAAAAGATTCCAAAGGTGCTGGACTGAAGAATCACGGAGGCCTAAGCCATGGCTACTCCGAGCACTAAATAATAGCCTTGGTCGAAGGTTCTGGTTGGGTGGTATTTTCAAGGTTGGGCATGATCTATCTCAATTTGTTGGACCAGTTATACTGAGCCATATCCTGCAGTCAATGATAGAAGGTGATCCAGCTTGGGTTGGCTATGTCTATGCTTTCTTAATTTTCTTTGGGGTGACATTTGGAGTGCTTTGTCAATCTCAGTACTTTCAACATGTTGGGCGAGTGGGATTTCGGTTGAGGTCAACTTTGGTTGCAGCTATATTCCACAAATCTTTAAGACTAACCAATAAAGCTCGCAAAAATTTTGCATCTGGGAAAGTCACAAACATGATAACTACTGATGCTAATGCACTTCAGCTAATAGCAGAACAGCTCCATGGTTTATGGTCAGCTCCCTTTCGCATCATTGTGTCTATGGTTCTTCTCTATCAACAACTAGGAGTTGCTTCAATTTTCGGTTCACTGATTTTATTTCTCCTTATTCCTTTCCAGACTCTGATTGTAAGAAAAATGCGGAAACTTACTAAAGAAGGACTCCAGTGGACTGACAAAAGAGTCGGTATCATATATGAGATTTTGGCATCCATGGATATTGTAAAATGCTATGCATGGGAGAAGAGCTTCGAGTCCCGGATTCAAGGAATTAGAAACGAAGAGCTCTCATGGTTTCGTAAAGCGCAGTTACTATCAGCTTTTAATAGTTTTATACTGAACAGCACCCCAGTTGTTGTGACCTTGGTTTCATTTGGGGTTTATGTTCTGCTTGGAGGAGATTTGACACCAGCAAGGGCATTCACATCTCTTTCTCTATTTGCAGTTCTAAGATCTCCTCTCAGCACGCTACCAAATCTTATAAGTCAGGCTGTCAACGCAAATGTTTCACTGCAACGCATTGAGGAACTACTTTTAAGTGAAGAGAGAATTCTAGCACAAAACCCACCTCTCCAACCAGGAGCTCCAGCCATTTCCATTAAGAATGGATATTTTTCATGGGATTCAAAGACATCCAAACCCACATTATCGGATATCAATTTGGAGATACCGGTGGGCAGCTTGGTTGCCATTGTAGGTGGAACTGGAGAAGGTAAGACGTCACTTATTTCGGCAATGCTGGGGGAGTTATCTCATGCTGAAACCTCAAGCGTTGATATCAGAGGATCTGTAGCTTATGTACCTCAAGTTTCATGGATCTTTAATGCCACTCTGCGTGAAAACATTTTATTTGGGTCAGATTTTGAGTCTGAAAGATATTGGAGGGCTATTGATGTGACTGCCTTACAACACGATCTTGATTTGTTTCCAGGCCGTGATCGTACTGAGATTGGAGAACGTGGGGTGAATATTAGTGGAGGGCAGAAGCAGAGAGTTTCAATGGCTAGGGCAGTCTACTCAAATTCAGATATTTACATATTTGATGATCCTTTCAGTGCTTTAGATGCTCATGTTGCTCACCAGGTCTTTGATAGCTGCGTGAAGCATGAGCTGAAGGGGAAAACCAGGGTTCTTGTAACAAATCAGCTACATTTTCTTCCTTTGATGGATAGAATAATTTTAGTCTCCGAAGGAATGATCAAAGAGGAGGGAAACTTCGCAGAGCTGTCAAAAAGTGGGACTTTGTTCAAAAAACTAATGGAGAATGCTGGAAAAATGGATGCAACCCAAGAAGTCAATACAAATGACGAGAACATTTCGAAGCTGGGTCCTACTGTCACGATTGATGTGAGTGAAAGAAGTCTTGGCAGTATCCAGCAAGGGAAATGGGGAAGATCCATGCTTGTAAAGCAAGAAGAGCGGGAAACTGGCATCATTAGCTGGGATGTTGTGATGAGGTATAATAAAGCAGTAGGCGGCTTATGGGTAGTTATGATTCTCTTAGTATGCTATTTAACAACTGAAGTTCTCCGAGTTTTAAGTAGCACATGGTTAAGTATTTGGACTGATCAAAGCACGCCAAAGAGTTATAGTCCCGGTTTCTACATTGTCGTATATGCTCTTCTCGGATTTGGTCAGGTGGCTGTCACGTTTACCAACTCTTTTTGGTTGATCTCGTCAAGTTTACATGCCGCTAAAAGACTCCATGACGCAATGCTGAATTCTATCCTACGTGCTCCTATGCTCTTCTTCGAAACAAACCCAACCGGACGTGTAATAAACAGGTTTTCTAAGGATATTGGTGATATAGATAGAAACGTGGCCAACCTAATGAACATGTTCATGAACCAGCTATGGCAACTCCTCTCGACATTTGCACTTATAGGTATTGTCAGTACAATTTCATTGTGGGCAATAATGCCACTCCTAATACTGTTTTATGCAACATATATCTACTATCAGAGCACATCCCGTGAAGTTAGACGTTTGGATTCCGTTACTAGATCACCTATCTATGCTCTATTTGGAGAAGCTTTGAATGGTTTGTCAAGCATCCGAGCCTATAAAGCCTATGACCGGATGGCAAAGATAAATGGAAAATCCATGGACAACAACATAAGGTTTACTCTCGCTAGTACTAGCTCAAATCGTTGGCTCACTATAAGATCTGAGAGTCTTGGGGGTGTCATGATTTGGTTAACTGCAACTTTTGCGGTTCTGCGATATGGGAATGCAGAGAACCAAGCTGTTTTTGCATCTACGATGGGTCTCCTTCTTAGTTACACTCTGAATATCACTACTCTGTTAAGTGGTGTTCTAAGGCAAGCTAGCAAAGCAGAGAACAGCTTAAACTCTGTTGAGCGTGTTGGCAACTATATTGATCTTCCTTCTGAGGCTACAGCTATAATCGAGAACAATCGTCCAGTATCTGGCTGGCCTTCAAGAGGATCAATTCAATTTGAAGACGTTCACCTGCGTTATAGACCCGGGCTTCCTCCAGTATTGCATGGACTGTCCTTTTTTGTTTATCCGAGTGAGAAAGTAGGAGTGGTGGGAAGAACTGGGGCAGGAAAGTCTTCCATGCTGAATGCATTATACCGGATTGTGGAATTGGAAAAAGGAAGAATCCTGATTGATGATTATGATGTGGCTAAGTTTGGACTGACAGATTTGCGTAGGGTCCTAAGTATCATACCCCAGTCACCAGTTCTTTTTTCAGGGACGGTGAGATTCAATATCGATCCATTTAGTGAACACAATGATGCTGACCTCTGGGAGGCTCTAGAAAGGGCGCATATAAAAGATGTCATCGATAGGAATCCTTTTGGCCTAGATGCAGAGGTCTCTGAGGGAGGTGAGAACTTCAGTGTGGGGCAAAGACAACTGCTGAGTCTAGCGCGTGCATTGCTAAGAAGATCTAAGATCCTTTTTCTTGATGAAGCAACTGCATCTGTTGATGTCAGAACAGATTCTCTGATACAGAGGACCATACGTGAGGAATTCAAGTCTTGTACAATGCTTATTATCGCTCACAGATTGAATACCATCATCGACTGCGACAAGATCCTTGTGCTTAGTTCTGGTCAGGTTTTGGAGTATGATAGTCCACAAGAATTGCTATCAAGAGATACAAGTGCTTTCTTTAAGATGGTTCATAGCACTGGACCAGAAAATGGTCAGTACCTTTCCAACTTGGTCTTTGAAAGGAGAGGGAATGGAATGAGTCAAGGTGGATAG

Protein Analysis

1495

Amino Acids

168.1

Weight (kDa)

7.75

Isoelectric Point (pI)

40.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 304 - 571 1.4e-37 ABC transporter transmembrane region
ABC_tran PF00005 633 - 768 1.6e-18 ABC transporter
ABC_membrane PF00664 915 - 1067 6.8e-22 ABC transporter transmembrane region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1733
AarI CACCTGC 1 cut(s) 3732
AasI GACNNNNNNGTC 1 cut(s) 1433
AatII GACGTC 1 cut(s) 1973
Acc36I ACCTGC 1 cut(s) 3732
AccB1I GGYRCC 1 cut(s) 80
AccB7I CCANNNNNTGG 2 cut(s) 3680, 4424
AccBSI CCGCTC 1 cut(s) 2671
AccI GTMKAC 1 cut(s) 2265
AccII CGCG 1 cut(s) 4150
AciI CCGC 7 cut(s) 467, 734, 1393, 2671, 2727, 2943, 3464
AcoI YGGCCR 1 cut(s) 3072
AcsI RAATTY 5 cut(s) 1180, 1800, 2272, 2971, 4250
AcuI CTGAAG 5 cut(s) 864, 1217, 2384, 2793, 4099
AcyI GRCGYC 2 cut(s) 731, 1970
AdeI CACNNNGTG 2 cut(s) 93, 226
AfiI CCNNNNNNNGG 6 cut(s) 3327, 3680, 3695, 3856, 4027, 4424
AflIII ACRYGT 3 cut(s) 1090, 3022, 3087
AgeI ACCGGT 1 cut(s) 1921
AhlI ACTAGT 1 cut(s) 109
AjiI CACGTC 1 cut(s) 3023
AjnI CCWGG 6 cut(s) 549, 661, 1828, 2179, 2331, 2375
AjuI GAANNNNNNNTTGG 2 cut(s) 2598, 2630
Alw21I GWGCWC 5 cut(s) 883, 1539, 1837, 2989, 3218
Alw26I GTCTC 3 cut(s) 2440, 3524, 4099
AlwNI CAGNNNCTG 2 cut(s) 1375, 3680
Ama87I CYCGRG 2 cut(s) 683, 3737
AoxI GGCC 5 cut(s) 857, 2182, 3072, 3686, 4078
ApeKI GCWGC 4 cut(s) 472, 1133, 1929, 2346
ApoI RAATTY 5 cut(s) 1180, 1800, 2272, 2971, 4250
ArsI GACNNNNNNTTYG 2 cut(s) 393, 425
AsiGI ACCGGT 1 cut(s) 1921
Asp700I GAANNNNTTC 5 cut(s) 1499, 3089, 3717, 3826, 4219
AspLEI GCGC 3 cut(s) 1558, 4045, 4150
AspS9I GGNCC 7 cut(s) 478, 799, 959, 2579, 3931, 4236, 4415
AsuC2I CCSGG 4 cut(s) 1510, 2847, 3738, 3739
AsuII TTCGAA 2 cut(s) 2570, 3003
AsuNHI GCTAGC 1 cut(s) 3578
AvaI CYCGRG 2 cut(s) 683, 3737
AvaII GGWCC 7 cut(s) 478, 799, 959, 2579, 3931, 4236, 4415
BalI TGGCCA 1 cut(s) 3074
BanI GGYRCC 1 cut(s) 80
BanII GRGCYC 2 cut(s) 1539, 1837
BarI GAAGNNNNNNTAC 2 cut(s) 2856, 2888
BbsI GAAGAC 2 cut(s) 3720, 3819
Bbv12I GWGCWC 5 cut(s) 883, 1539, 1837, 2989, 3218
BbvI GCAGC 4 cut(s) 459, 1145, 1941, 2333
BccI CCATC 7 cut(s) 62, 417, 2410, 3325, 3508, 4304, 4393
BceAI ACGGC 2 cut(s) 76, 2169
BcgI CGANNNNNNTGC 2 cut(s) 674, 708
BciT130I CCWGG 6 cut(s) 551, 663, 1830, 2181, 2333, 2377
BciVI GTATCC 1 cut(s) 2633
BclI TGATCA 2 cut(s) 2448, 2818
BcnI CCSGG 4 cut(s) 1510, 2847, 3738, 3739
BcoDI GTCTC 3 cut(s) 2440, 3524, 4099
BcuI ACTAGT 1 cut(s) 109
BfmI CTRYAG 4 cut(s) 751, 983, 2040, 3648
BfuAI ACCTGC 1 cut(s) 3732
BfuI GTATCC 1 cut(s) 2633
BglII AGATCT 3 cut(s) 1703, 3416, 4166
BisI GCNGC 7 cut(s) 473, 734, 1134, 1930, 2347, 2728, 2943
BlsI GCNGC 7 cut(s) 474, 735, 1135, 1931, 2348, 2729, 2944
BmcAI AGTACT 2 cut(s) 1082, 3388
Bme18I GGWCC 7 cut(s) 478, 799, 959, 2579, 3931, 4236, 4415
BmeT110I CYCGRG 2 cut(s) 683, 3737
BmgBI CACGTC 1 cut(s) 3023
BmgT120I GGNCC 7 cut(s) 478, 799, 959, 2579, 3931, 4236, 4415
BmiI GGNNCC 4 cut(s) 82, 800, 2580, 3932
BmrI ACTGGG 3 cut(s) 1595, 3822, 3943
BmtI GCTAGC 1 cut(s) 3582
BmuI ACTGGG 3 cut(s) 1595, 3822, 3943
BpiI GAAGAC 2 cut(s) 3720, 3819
BpmI CTGGAG 4 cut(s) 1400, 1821, 1977, 3732
Bpu10I CCTNAGC 1 cut(s) 861
Bpu14I TTCGAA 2 cut(s) 2570, 3003
BpuEI CTTGAG 3 cut(s) 479, 2002, 2040
BpuMI CCSGG 4 cut(s) 1510, 2847, 3738, 3739
Bsa29I ATCGAT 2 cut(s) 3990, 4062
BsaAI YACGTR 3 cut(s) 430, 2984, 4244
BsaBI GATNNNNATC 3 cut(s) 164, 600, 4068
BsaHI GRCGYC 2 cut(s) 731, 1970
BsaI GGTCTC 2 cut(s) 3524, 4099
BsaJI CCNNGG 9 cut(s) 662, 866, 895, 1255, 1464, 1614, 2376, 3354, 3737
BsaWI WCCGGW 6 cut(s) 64, 156, 1921, 3017, 3327, 3849
Bsc4I CCNNNNNNNGG 6 cut(s) 3327, 3680, 3695, 3856, 4027, 4424
Bse118I RCCGGY 1 cut(s) 1921
Bse3DI GCAATG 3 cut(s) 1992, 2970, 4154
Bse8I GATNNNNATC 3 cut(s) 164, 600, 4068
BseBI CCWGG 6 cut(s) 551, 663, 1830, 2181, 2333, 2377
BseCI ATCGAT 2 cut(s) 3990, 4062
BseDI CCNNGG 9 cut(s) 662, 866, 895, 1255, 1464, 1614, 2376, 3354, 3737
BseJI GATNNNNATC 3 cut(s) 164, 600, 4068
BseLI CCNNNNNNNGG 6 cut(s) 3327, 3680, 3695, 3856, 4027, 4424
BseMI GCAATG 3 cut(s) 1992, 2970, 4154
BseRI GAGGAG 4 cut(s) 1662, 1698, 2471, 3104
BseXI GCAGC 4 cut(s) 459, 1145, 1941, 2333
BseYI CCCAGC 3 cut(s) 1990, 2575, 2691
Bsh1236I CGCG 1 cut(s) 4150
BshFI GGCC 5 cut(s) 859, 2184, 3074, 3688, 4080
BshNI GGYRCC 1 cut(s) 80
BshTI ACCGGT 1 cut(s) 1921
BshVI ATCGAT 2 cut(s) 3990, 4062
BsiHKAI GWGCWC 5 cut(s) 883, 1539, 1837, 2989, 3218
BsiHKCI CYCGRG 2 cut(s) 683, 3737
BsiSI CCGG 9 cut(s) 65, 157, 1510, 1922, 2847, 3018, 3328, 3738, 3850
BslFI GGGAC 6 cut(s) 666, 812, 1492, 2503, 2829, 3985
BslI CCNNNNNNNGG 6 cut(s) 3327, 3680, 3695, 3856, 4027, 4424
BsmAI GTCTC 3 cut(s) 2440, 3524, 4099
BsmFI GGGAC 6 cut(s) 666, 812, 1492, 2503, 2829, 3985
BsmI GAATGC 4 cut(s) 1670, 2521, 3487, 3844
BsnI GGCC 5 cut(s) 859, 2184, 3074, 3688, 4080
Bso31I GGTCTC 2 cut(s) 3524, 4099
BsoBI CYCGRG 2 cut(s) 683, 3737
Bsp119I TTCGAA 2 cut(s) 2570, 3003
Bsp1286I GDGCHC 5 cut(s) 883, 1539, 1837, 2989, 3218
Bsp1407I TGTACA 2 cut(s) 174, 4262
Bsp19I CCATGG 4 cut(s) 866, 1255, 1464, 3354
BspACI CCGC 7 cut(s) 467, 734, 1393, 2671, 2727, 2943, 3464
BspANI GGCC 5 cut(s) 859, 2184, 3074, 3688, 4080
BspDI ATCGAT 2 cut(s) 3990, 4062
BspFNI CGCG 1 cut(s) 4150
BspHI TCATGA 2 cut(s) 3093, 3438
BspLI GGNNCC 4 cut(s) 82, 800, 2580, 3932
BspMAI CTGCAG 1 cut(s) 987
BspMI ACCTGC 1 cut(s) 3732
BspOI GCTAGC 1 cut(s) 3582
BspQI GCTCTTC 5 cut(s) 1490, 1527, 2661, 2877, 3002
BspT104I TTCGAA 2 cut(s) 2570, 3003
BspT107I GGYRCC 1 cut(s) 80
BspTNI GGTCTC 2 cut(s) 3524, 4099
BsrBI CCGCTC 1 cut(s) 2671
BsrDI GCAATG 3 cut(s) 1992, 2970, 4154
BsrFI RCCGGY 1 cut(s) 1921
BsrGI TGTACA 2 cut(s) 174, 4262
BssAI RCCGGY 1 cut(s) 1921
BssECI CCNNGG 9 cut(s) 662, 866, 895, 1255, 1464, 1614, 2376, 3354, 3737
BssNI GRCGYC 2 cut(s) 731, 1970
BssT1I CCWWGG 6 cut(s) 866, 895, 1255, 1464, 1614, 3354
Bst2UI CCWGG 6 cut(s) 551, 663, 1830, 2181, 2333, 2377
Bst4CI ACNGT 5 cut(s) 224, 2587, 3186, 3765, 3976
Bst6I CTCTTC 6 cut(s) 1490, 1527, 1788, 2661, 2877, 3002
BstACI GRCGYC 2 cut(s) 731, 1970
BstAPI GCANNNNNTGC 1 cut(s) 3461
BstAUI TGTACA 2 cut(s) 174, 4262
BstBAI YACGTR 3 cut(s) 430, 2984, 4244
BstBI TTCGAA 2 cut(s) 2570, 3003
BstC8I GCNNGC 9 cut(s) 32, 697, 1174, 1718, 2828, 3576, 3580, 3686, 4152
BstDSI CCRYGG 4 cut(s) 866, 1255, 1464, 3354
BstENI CCTNNNNNAGG 2 cut(s) 3693, 4025
BstFNI CGCG 1 cut(s) 4150
BstHHI GCGC 3 cut(s) 1558, 4045, 4150
BstMAI GTCTC 3 cut(s) 2440, 3524, 4099
BstNI CCWGG 6 cut(s) 551, 663, 1830, 2181, 2333, 2377
BstNSI RCATGY 3 cut(s) 1094, 2942, 3091
BstSFI CTRYAG 4 cut(s) 751, 983, 2040, 3648
BstUI CGCG 1 cut(s) 4150
BstV1I GCAGC 4 cut(s) 459, 1145, 1941, 2333
BstV2I GAAGAC 2 cut(s) 3720, 3819
BstX2I RGATCY 9 cut(s) 595, 1703, 2036, 2067, 2645, 3416, 4166, 4173, 4314
BstYI RGATCY 9 cut(s) 595, 1703, 2036, 2067, 2645, 3416, 4166, 4173, 4314
Bsu15I ATCGAT 2 cut(s) 3990, 4062
BsuI GTATCC 1 cut(s) 2633
BsuRI GGCC 5 cut(s) 859, 2184, 3074, 3688, 4080
BsuTUI ATCGAT 2 cut(s) 3990, 4062
BtgI CCRYGG 4 cut(s) 866, 1255, 1464, 3354
BtrI CACGTC 1 cut(s) 3023
BtsI GCAGTG 2 cut(s) 656, 1760
BtsIMutI CAGTG 8 cut(s) 220, 656, 1340, 1424, 1760, 2311, 4123, 4410
BveI ACCTGC 1 cut(s) 3732
Cac8I GCNNGC 9 cut(s) 32, 697, 1174, 1718, 2828, 3576, 3580, 3686, 4152
CaiI CAGNNNCTG 2 cut(s) 1375, 3680
CciI TCATGA 2 cut(s) 3093, 3438
CfoI GCGC 3 cut(s) 1558, 4045, 4150
Cfr10I RCCGGY 1 cut(s) 1921
Cfr13I GGNCC 7 cut(s) 478, 799, 959, 2579, 3931, 4236, 4415
Cfr9I CCCGGG 1 cut(s) 3737
ClaI ATCGAT 2 cut(s) 3990, 4062
CseI GACGC 2 cut(s) 739, 2969
CsiI ACCWGGT 1 cut(s) 2331
CspAI ACCGGT 1 cut(s) 1921
CspCI CAANNNNNGTGG 2 cut(s) 4347, 4382
DraIII CACNNNGTG 2 cut(s) 93, 226
DrdI GACNNNNNNGTC 1 cut(s) 1433
DseDI GACNNNNNNGTC 1 cut(s) 1433
EaeI YGGCCR 1 cut(s) 3072
Eam1104I CTCTTC 6 cut(s) 1490, 1527, 1788, 2661, 2877, 3002
EarI CTCTTC 6 cut(s) 1490, 1527, 1788, 2661, 2877, 3002
Ecl136II GAGCTC 2 cut(s) 1537, 1835
Eco130I CCWWGG 6 cut(s) 866, 895, 1255, 1464, 1614, 3354
Eco147I AGGCCT 1 cut(s) 859
Eco24I GRGCYC 2 cut(s) 1539, 1837
Eco31I GGTCTC 2 cut(s) 3524, 4099
Eco32I GATATC 2 cut(s) 1906, 2029
Eco47I GGWCC 7 cut(s) 478, 799, 959, 2579, 3931, 4236, 4415
Eco53kI GAGCTC 2 cut(s) 1537, 1835
Eco57I CTGAAG 5 cut(s) 864, 1217, 2384, 2793, 4099
Eco88I CYCGRG 2 cut(s) 683, 3737
EcoICRI GAGCTC 2 cut(s) 1537, 1835
EcoNI CCTNNNNNAGG 2 cut(s) 3693, 4025
EcoO109I RGGNCCY 2 cut(s) 2579, 3931
EcoRI GAATTC 3 cut(s) 1800, 2971, 4250
EcoRII CCWGG 6 cut(s) 549, 661, 1828, 2179, 2331, 2375
EcoRV GATATC 2 cut(s) 1906, 2029
EcoT14I CCWWGG 6 cut(s) 866, 895, 1255, 1464, 1614, 3354
EcoT22I ATGCAT 2 cut(s) 1489, 3844
EcoT38I GRGCYC 2 cut(s) 1539, 1837
ErhI CCWWGG 6 cut(s) 866, 895, 1255, 1464, 1614, 3354
FalI AAGNNNNNCTT 2 cut(s) 2476, 2508
FaqI GGGAC 6 cut(s) 666, 812, 1492, 2503, 2829, 3985
FauI CCCGC 1 cut(s) 2664
FauNDI CATATG 1 cut(s) 677
FbaI TGATCA 2 cut(s) 2448, 2818
FblI GTMKAC 1 cut(s) 2265
Fnu4HI GCNGC 7 cut(s) 473, 734, 1134, 1930, 2347, 2728, 2943
FriOI GRGCYC 2 cut(s) 1539, 1837
Fsp4HI GCNGC 7 cut(s) 473, 734, 1134, 1930, 2347, 2728, 2943
GlaI GCGC 3 cut(s) 1557, 4044, 4149
GluI GCNGC 7 cut(s) 473, 734, 1134, 1930, 2347, 2728, 2943
GsaI CCCAGC 3 cut(s) 1994, 2579, 2695
GsuI CTGGAG 4 cut(s) 1400, 1821, 1977, 3732
HaeIII GGCC 5 cut(s) 859, 2184, 3074, 3688, 4080
HapII CCGG 9 cut(s) 65, 157, 1510, 1922, 2847, 3018, 3328, 3738, 3850
HgaI GACGC 2 cut(s) 739, 2969
HhaI GCGC 3 cut(s) 1558, 4045, 4150
Hin1I GRCGYC 2 cut(s) 731, 1970
Hin6I GCGC 3 cut(s) 1556, 4043, 4148
HinP1I GCGC 3 cut(s) 1556, 4043, 4148
HincII GTYRAC 3 cut(s) 1122, 1747, 3450
HindII GTYRAC 3 cut(s) 1122, 1747, 3450
HindIII AAGCTT 1 cut(s) 3282
HpaI GTTAAC 1 cut(s) 3450
HpaII CCGG 9 cut(s) 65, 157, 1510, 1922, 2847, 3018, 3328, 3738, 3850
HpyCH4III ACNGT 5 cut(s) 224, 2587, 3186, 3765, 3976
Hsp92I GRCGYC 2 cut(s) 731, 1970
HspAI GCGC 3 cut(s) 1556, 4043, 4148
Ksp22I TGATCA 2 cut(s) 2448, 2818
KspAI GTTAAC 1 cut(s) 3450
LguI GCTCTTC 5 cut(s) 1490, 1527, 2661, 2877, 3002
LmnI GCTCC 5 cut(s) 1257, 1276, 1832, 1840, 2992
Lsp1109I GCAGC 4 cut(s) 459, 1145, 1941, 2333
MabI ACCWGGT 1 cut(s) 2331
MbiI CCGCTC 1 cut(s) 2671
MfeI CAATTG 1 cut(s) 36
MflI RGATCY 9 cut(s) 595, 1703, 2036, 2067, 2645, 3416, 4166, 4173, 4314
MhlI GDGCHC 5 cut(s) 883, 1539, 1837, 2989, 3218
MlsI TGGCCA 1 cut(s) 3074
MluNI TGGCCA 1 cut(s) 3074
MmeI TCCRAC 4 cut(s) 704, 937, 1849, 4464
Mox20I TGGCCA 1 cut(s) 3074
Mph1103I ATGCAT 2 cut(s) 1489, 3844
MroXI GAANNNNTTC 5 cut(s) 1499, 3089, 3717, 3826, 4219
MscI TGGCCA 1 cut(s) 3074
MslI CAYNNNNRTG 4 cut(s) 1205, 1286, 3092, 4011
Msp20I TGGCCA 1 cut(s) 3074
MspI CCGG 9 cut(s) 65, 157, 1510, 1922, 2847, 3018, 3328, 3738, 3850
MunI CAATTG 1 cut(s) 36
Mva1269I GAATGC 4 cut(s) 1670, 2521, 3487, 3844
MvaI CCWGG 6 cut(s) 551, 663, 1830, 2181, 2333, 2377
MvnI CGCG 1 cut(s) 4150
NciI CCSGG 4 cut(s) 1510, 2847, 3738, 3739
NcoI CCATGG 4 cut(s) 866, 1255, 1464, 3354
NdeI CATATG 1 cut(s) 677
NheI GCTAGC 1 cut(s) 3578
NlaIV GGNNCC 4 cut(s) 82, 800, 2580, 3932
NmuCI GTSAC 8 cut(s) 1051, 1198, 1609, 1971, 2146, 2587, 2896, 3951
NsiI ATGCAT 2 cut(s) 1489, 3844
NspI RCATGY 3 cut(s) 1094, 2942, 3091
NspV TTCGAA 2 cut(s) 2570, 3003
PagI TCATGA 2 cut(s) 3093, 3438
PaqCI CACCTGC 1 cut(s) 3732
PceI AGGCCT 1 cut(s) 859
PciI ACATGT 2 cut(s) 1090, 3087
PciSI GCTCTTC 5 cut(s) 1490, 1527, 2661, 2877, 3002
PctI GAATGC 4 cut(s) 1670, 2521, 3487, 3844
PdmI GAANNNNTTC 5 cut(s) 1499, 3089, 3717, 3826, 4219
PflMI CCANNNNNTGG 2 cut(s) 3680, 4424
PfoI TCCNGGA 1 cut(s) 1508
PinAI ACCGGT 1 cut(s) 1921
PkrI GCNGC 7 cut(s) 474, 735, 1135, 1931, 2348, 2729, 2944
Ppu21I YACGTR 3 cut(s) 430, 2984, 4244
PpuMI RGGWCCY 2 cut(s) 2579, 3931
PscI ACATGT 2 cut(s) 1090, 3087
PsiI TTATAA 1 cut(s) 1733
Psp124BI GAGCTC 2 cut(s) 1539, 1837
Psp5II RGGWCCY 2 cut(s) 2579, 3931
Psp6I CCWGG 6 cut(s) 549, 661, 1828, 2179, 2331, 2375
PspFI CCCAGC 3 cut(s) 1990, 2575, 2691
PspGI CCWGG 6 cut(s) 549, 661, 1828, 2179, 2331, 2375
PspN4I GGNNCC 4 cut(s) 82, 800, 2580, 3932
PspPI GGNCC 7 cut(s) 478, 799, 959, 2579, 3931, 4236, 4415
PspPPI RGGWCCY 2 cut(s) 2579, 3931
PstI CTGCAG 1 cut(s) 987
PstNI CAGNNNCTG 2 cut(s) 1375, 3680
PsuI RGATCY 9 cut(s) 595, 1703, 2036, 2067, 2645, 3416, 4166, 4173, 4314
RseI CAYNNNNRTG 4 cut(s) 1205, 1286, 3092, 4011
SacI GAGCTC 2 cut(s) 1539, 1837
SapI GCTCTTC 5 cut(s) 1490, 1527, 2661, 2877, 3002
SatI GCNGC 7 cut(s) 473, 734, 1134, 1930, 2347, 2728, 2943
Sau96I GGNCC 7 cut(s) 478, 799, 959, 2579, 3931, 4236, 4415
ScaI AGTACT 2 cut(s) 1082, 3388
SduI GDGCHC 5 cut(s) 883, 1539, 1837, 2989, 3218
SexAI ACCWGGT 1 cut(s) 2331
SfcI CTRYAG 4 cut(s) 751, 983, 2040, 3648
SfuI TTCGAA 2 cut(s) 2570, 3003
SinI GGWCC 7 cut(s) 478, 799, 959, 2579, 3931, 4236, 4415
SmaI CCCGGG 1 cut(s) 3739
SmiMI CAYNNNNRTG 4 cut(s) 1205, 1286, 3092, 4011
SmlI CTYRAG 3 cut(s) 494, 2017, 2055
SmoI CTYRAG 3 cut(s) 494, 2017, 2055
SpeI ACTAGT 1 cut(s) 109
SseBI AGGCCT 1 cut(s) 859
SsiI CCGC 7 cut(s) 467, 734, 1393, 2671, 2727, 2943, 3464
SspI AATATT 1 cut(s) 2221
SstI GAGCTC 2 cut(s) 1539, 1837
StuI AGGCCT 1 cut(s) 859
StyI CCWWGG 6 cut(s) 866, 895, 1255, 1464, 1614, 3354
TaaI ACNGT 5 cut(s) 224, 2587, 3186, 3765, 3976
TaqI TCGA 9 cut(s) 901, 1503, 2570, 3003, 3119, 3660, 3990, 4062, 4302
TatI WGTACW 8 cut(s) 133, 174, 213, 265, 1080, 3146, 3386, 4262
TauI GCSGC 3 cut(s) 736, 2730, 2945
TscAI CASTG 8 cut(s) 227, 663, 1347, 1424, 1767, 2311, 4123, 4417
TseFI GTSAC 8 cut(s) 1051, 1198, 1609, 1971, 2146, 2587, 2896, 3951
TseI GCWGC 4 cut(s) 472, 1133, 1929, 2346
Tsp45I GTSAC 8 cut(s) 1051, 1198, 1609, 1971, 2146, 2587, 2896, 3951
TspGWI ACGGA 2 cut(s) 868, 3235
TspMI CCCGGG 1 cut(s) 3737
TspRI CASTG 8 cut(s) 227, 663, 1347, 1424, 1767, 2311, 4123, 4417
Van91I CCANNNNNTGG 2 cut(s) 3680, 4424
VpaK11BI GGWCC 7 cut(s) 478, 799, 959, 2579, 3931, 4236, 4415
XagI CCTNNNNNAGG 2 cut(s) 3693, 4025
XapI RAATTY 5 cut(s) 1180, 1800, 2272, 2971, 4250
XbaI TCTAGA 1 cut(s) 4033
XceI RCATGY 3 cut(s) 1094, 2942, 3091
XcmI CCANNNNNNNNNTGG 2 cut(s) 557, 3681
XmaI CCCGGG 1 cut(s) 3737
XmiI GTMKAC 1 cut(s) 2265
XmnI GAANNNNTTC 5 cut(s) 1499, 3089, 3717, 3826, 4219
ZraI GACGTC 1 cut(s) 1971
ZrmI AGTACT 2 cut(s) 1082, 3388
Zsp2I ATGCAT 2 cut(s) 1489, 3844
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.