Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001783

Physical Location & Seq

Genomic Coordinates Reverse (-)

1760819 .. 1763514

Gene Structure 2696 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0027500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGGCTTCTCTCTTATCCAACGGTATCTCCATCTTCTCTCCCCAACCCACTTCCGACCCCCCCAAGTTCCCAAACCCCTTCCACCCCAACTTCCTCAAGCTCCAAACCCACTTCCGACCCTCCTCCTCCCGCGTCGTCAAGGTCCGCGCCGACGTCAGCTACGACCCCACCACCACCTCCCCCGACCCGACCAACTCCCCAGCTAAGCTCTCACCAGTTGAGGAGTTTCTCCGCAACCGCGACTACGACAAGAAATTCGGGTTCAACATAGACATAGATTCGATTTCAATTCCCAAAGGGCTGTCGAGAGAGACCATCTGTTTGATCTCCAAGATTAAAGAAGAGCCGGTTTGGATGCTTGAGTTTCGTTTGAAAGCTTACGAGAAATTCCTGACCATGAAGGAGCCCAACTGGTCTGACAATCGATACCCACCTGTGAATTTTCAAGATATGTGTTACTATTCTGCGCCCAAGAAGAAGAAGAGCTTGAATAGCTTGGATGAGGCCGACCCGGAATTGCTCAAGTACTTTGATAAGTTGGGTGTGCCTTTGAATGAGCAGAATCGGCTGGCGAATGTTGCAGTTGATGCAGTGTTGGACAGTGTTTCGATCGCCACGACGCATAGGAAGACTCTGGAGGAGGCTGGGGTGATCTTCTGTTCGATTTCGGAGGCGATTAAGGAGCACCCGGATTTGGTTAAGGAGTATTTGGGGAAGGTGGTGCCGCCTGGGGACAATTACTATGCTGCTTTGAATGCTGCAGTTTTTAGTGACGGCTCGTTTTGTTATATTCCGAAAGATGTGAAATGTCCTATGCAAATTTCGACGTACTTCAGGATCAATGCGCTGGAGACGGGGCAGTTTGAGAGGACTTTGATTGTGGCGGAGGATAGGAGTTTCGTGGAGTATTTGGAGGGGTGTACAGCTCCTTCTTATGACCGGAACCAGCTTCATGCCGCGGTGGTGGAGTTGTATTGTGCTGAGGGTGCCGAGATTAAGTACTCCACGGTGCAGAATTGGTATGCTGGGGATGAGGAAGGGAAGGGAGGGATATATAATTTCGTGACCAAGAGAGGGCGTTGCGCAGGGGCGAGGTCTAAGATATCTTGGACTCAGGTGGAGACAGGGTCTGCCATTACTTGGAAGTATCCGAGTGTTGTTCTGGAGGGGGATGATTCTGTGGGAGAGTTTTACTCGGTGGCTTTGACTAATAACTATCAGCAGGCAGACACCGGGACAAAGATGATACACAAGGGGAAGAATACAAGAAGTAGGATTATTTCAAAGGGTATATCAGCTGGGAATTCAAGAAACTGTTATCGGGGCCTTGTGCAGGTTTTTTCACAGGCAGAGAATGCTCGAAATTCCTCACAGTGTGATTCAATGCTTATTGGAGATAATGCAGCTGCCAACACCTACCCATACATTGAGGTCAAGAATCCCACAGCTCGCATTGAACACGAAGCCAGTACCTCCAAAATTGGTGAGGACCAGCTATTTTACTTTCAGCAAAGGGGAATAGACTATGAGAAAGCCATGGCTGCCATGATATCTGGTTTTTGCCAGGCAGTATTCAATGAGCTTCCTGATGAGTTTGGATCTGAGGTGAATCAACTGATTGGCTTGAAGCTTGAAGGAACAGTGGGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031090 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

549

Amino Acids

61.34

Weight (kDa)

5.63

Isoelectric Point (pI)

32.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SufBD_N	PF19295	199 - 272	2.6e-11	SufBD protein N-terminal region
SUFBD_core	PF01458	278 - 520	6.5e-76	SUF system FeS cluster assembly, SufBD core domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001783)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30410 AT1G30410 AT1G30410 AT1G30410 AT1G30410 AT1G30410 AT1G30420 AT1G30420
fragaria_vesca	FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_3g09710 FvH4_3g09720
malus_domestica	MD10G1255300.v1.1 MD10G1255500.v1.1
prunus_persica	Prupe.4G088600_v2.0.a1 Prupe.4G088600_v2.0.a1
pyrus_communis	pycom10g21050
rosa_chinensis	RchiOBHm_Chr3g0492011 RchiOBHm_Chr5g0015441 RchiOBHm_Chr5g0015451 RchiOBHm_Chr5g0015481 RchiOBHm_Chr5g0015491
rosa_laevigata	RLG00000032199 RLG00000032201 RLG00000032202
rosa_multiflora	Rmu_sc0019960.1_g000002
rosa_roxburghii	Rroxscaffold_1G00061020 Rroxscaffold_1G00061040 Rroxscaffold_1G00061050 Rroxscaffold_6G00392640
rosa_rugosa	Rorug03G0251100 Rorug05G0027400 Rorug05G0027500 Rorug05G0027700
rosa_samantha	Rh3AG301500 Rh5AG121000 Rh5AG121100 Rh5CG130600 Rh5DG118900 Rh5DG119000
rosa_wichuraiana	Rw5G010450 Rw5G010470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	156
Acc16I	TGCGCA	1 cut(s)	1084
Acc36I	ACCTGC	1 cut(s)	1324
AccB1I	GGYRCC	2 cut(s)	721, 986
AccB7I	CCANNNNNTGG	1 cut(s)	1140
AccII	CGCG	4 cut(s)	132, 147, 240, 959
AciI	CCGC	8 cut(s)	130, 145, 232, 238, 725, 884, 957, 959
AclWI	GGATC	2 cut(s)	845, 1606
AcsI	RAATTY	6 cut(s)	254, 386, 439, 819, 1303, 1363
AcuI	CTGAAG	1 cut(s)	817
AcyI	GRCGYC	1 cut(s)	153
AdeI	CACNNNGTG	1 cut(s)	1376
AfaI	GTAC	5 cut(s)	527, 830, 922, 1001, 1471
AfiI	CCNNNNNNNGG	4 cut(s)	694, 1074, 1140, 1333
AjnI	CCWGG	2 cut(s)	727, 1563
Alw21I	GWGCWC	1 cut(s)	687
Alw26I	GTCTC	3 cut(s)	305, 845, 1115
AlwI	GGATC	2 cut(s)	845, 1606
AlwNI	CAGNNNCTG	1 cut(s)	1130
AoxI	GGCC	2 cut(s)	504, 1324
ApeKI	GCWGC	5 cut(s)	746, 758, 1403, 1406, 1541
ApoI	RAATTY	6 cut(s)	254, 386, 439, 819, 1303, 1363
ArsI	GACNNNNNNTTYG	4 cut(s)	239, 271, 304, 336
AspLEI	GCGC	4 cut(s)	149, 469, 847, 1085
AspS9I	GGNCC	3 cut(s)	142, 1324, 1489
AsuC2I	CCSGG	3 cut(s)	512, 689, 1234
AsuHPI	GGTGA	4 cut(s)	204, 661, 1496, 1618
AvaII	GGWCC	2 cut(s)	142, 1489
BanI	GGYRCC	2 cut(s)	721, 986
BanII	GRGCYC	1 cut(s)	408
BarI	GAAGNNNNNNTAC	2 cut(s)	913, 945
BbsI	GAAGAC	1 cut(s)	635
Bbv12I	GWGCWC	1 cut(s)	687
BbvCI	CCTCAGC	1 cut(s)	981
BbvI	GCAGC	5 cut(s)	733, 745, 1393, 1415, 1528
BccI	CCATC	2 cut(s)	38, 323
BceAI	ACGGC	1 cut(s)	790
BciT130I	CCWGG	2 cut(s)	729, 1565
BciVI	GTATCC	1 cut(s)	1158
BcnI	CCSGG	3 cut(s)	512, 689, 1234
BcoDI	GTCTC	3 cut(s)	305, 845, 1115
BfmI	CTRYAG	1 cut(s)	759
BfuAI	ACCTGC	1 cut(s)	1324
BfuI	GTATCC	1 cut(s)	1158
BisI	GCNGC	7 cut(s)	725, 747, 759, 957, 1404, 1407, 1542
BlpI	GCTNAGC	1 cut(s)	204
BlsI	GCNGC	7 cut(s)	726, 748, 760, 958, 1405, 1408, 1543
BmcAI	AGTACT	2 cut(s)	527, 1001
Bme1390I	CCNGG	5 cut(s)	512, 689, 729, 1234, 1565
Bme18I	GGWCC	2 cut(s)	142, 1489
BmgT120I	GGNCC	3 cut(s)	142, 1324, 1489
BmiI	GGNNCC	5 cut(s)	405, 723, 944, 988, 1325
BmrFI	CCNGG	5 cut(s)	512, 689, 729, 1234, 1565
BmsI	GCATC	2 cut(s)	345, 577
BpiI	GAAGAC	1 cut(s)	635
BplI	GAGNNNNNCTC	2 cut(s)	1178, 1210
BpmI	CTGGAG	3 cut(s)	656, 869, 1184
Bpu10I	CCTNAGC	1 cut(s)	981
Bpu1102I	GCTNAGC	1 cut(s)	204
BpuEI	CTTGAG	3 cut(s)	80, 380, 506
BpuMI	CCSGG	3 cut(s)	512, 689, 1234
Bsa29I	ATCGAT	1 cut(s)	424
BsaHI	GRCGYC	1 cut(s)	153
BsaI	GGTCTC	1 cut(s)	305
BsaJI	CCNNGG	4 cut(s)	728, 957, 1005, 1536
BsaWI	WCCGGW	1 cut(s)	939
BsaXI	ACNNNNNCTCC	4 cut(s)	11, 41, 1112, 1142
Bsc4I	CCNNNNNNNGG	4 cut(s)	694, 1074, 1140, 1333
Bse118I	RCCGGY	1 cut(s)	346
Bse1I	ACTGG	3 cut(s)	215, 416, 1467
BseBI	CCWGG	2 cut(s)	729, 1565
BseCI	ATCGAT	1 cut(s)	424
BseDI	CCNNGG	4 cut(s)	728, 957, 1005, 1536
BseGI	GGATG	4 cut(s)	360, 505, 1036, 1177
BseLI	CCNNNNNNNGG	4 cut(s)	694, 1074, 1140, 1333
BseMII	CTCAG	3 cut(s)	972, 1127, 1593
BseNI	ACTGG	3 cut(s)	215, 416, 1467
BseRI	GAGGAG	4 cut(s)	112, 115, 236, 653
BseXI	GCAGC	5 cut(s)	733, 745, 1393, 1415, 1528
BseYI	CCCAGC	4 cut(s)	199, 644, 1025, 1298
BsgI	GTGCAG	2 cut(s)	1031, 1352
Bsh1236I	CGCG	4 cut(s)	132, 147, 240, 959
Bsh1285I	CGRYCG	1 cut(s)	612
BshFI	GGCC	2 cut(s)	506, 1326
BshNI	GGYRCC	2 cut(s)	721, 986
BshVI	ATCGAT	1 cut(s)	424
BsiEI	CGRYCG	1 cut(s)	612
BsiHKAI	GWGCWC	1 cut(s)	687
BsiSI	CCGG	5 cut(s)	347, 512, 689, 940, 1233
BslFI	GGGAC	2 cut(s)	746, 1249
BslI	CCNNNNNNNGG	4 cut(s)	694, 1074, 1140, 1333
BsmAI	GTCTC	3 cut(s)	305, 845, 1115
BsmBI	CGTCTC	1 cut(s)	845
BsmFI	GGGAC	2 cut(s)	746, 1249
BsmI	GAATGC	2 cut(s)	760, 1360
BsnI	GGCC	2 cut(s)	506, 1326
Bso31I	GGTCTC	1 cut(s)	305
Bsp1286I	GDGCHC	2 cut(s)	408, 687
Bsp1407I	TGTACA	1 cut(s)	920
Bsp143I	GATC	5 cut(s)	324, 609, 651, 837, 1598
Bsp1720I	GCTNAGC	1 cut(s)	204
Bsp19I	CCATGG	1 cut(s)	1536
BspACI	CCGC	8 cut(s)	130, 145, 232, 238, 725, 884, 957, 959
BspANI	GGCC	2 cut(s)	506, 1326
BspCNI	CTCAG	3 cut(s)	973, 1126, 1594
BspDI	ATCGAT	1 cut(s)	424
BspFNI	CGCG	4 cut(s)	132, 147, 240, 959
BspLI	GGNNCC	5 cut(s)	405, 723, 944, 988, 1325
BspMAI	CTGCAG	1 cut(s)	763
BspMI	ACCTGC	1 cut(s)	1324
BspPI	GGATC	2 cut(s)	845, 1606
BspQI	GCTCTTC	2 cut(s)	336, 476
BspT107I	GGYRCC	2 cut(s)	721, 986
BspTNI	GGTCTC	1 cut(s)	305
BsrFI	RCCGGY	1 cut(s)	346
BsrGI	TGTACA	1 cut(s)	920
BsrI	ACTGG	3 cut(s)	215, 416, 1467
BssAI	RCCGGY	1 cut(s)	346
BssECI	CCNNGG	4 cut(s)	728, 957, 1005, 1536
BssMI	GATC	5 cut(s)	324, 609, 651, 837, 1598
BssNI	GRCGYC	1 cut(s)	153
BssT1I	CCWWGG	1 cut(s)	1536
Bst2UI	CCWGG	2 cut(s)	729, 1565
Bst4CI	ACNGT	6 cut(s)	23, 602, 1009, 1316, 1374, 1642
Bst6I	CTCTTC	2 cut(s)	336, 476
BstACI	GRCGYC	1 cut(s)	153
BstAPI	GCANNNNNTGC	2 cut(s)	587, 1355
BstAUI	TGTACA	1 cut(s)	920
BstC8I	GCNNGC	3 cut(s)	570, 1224, 1450
BstDEI	CTNAG	5 cut(s)	204, 981, 1098, 1113, 1602
BstDSI	CCRYGG	3 cut(s)	957, 1005, 1536
BstENI	CCTNNNNNAGG	1 cut(s)	1331
BstF5I	GGATG	4 cut(s)	360, 505, 1036, 1177
BstFNI	CGCG	4 cut(s)	132, 147, 240, 959
BstHHI	GCGC	4 cut(s)	149, 469, 847, 1085
BstKTI	GATC	5 cut(s)	327, 612, 654, 840, 1601
BstMAI	GTCTC	3 cut(s)	305, 845, 1115
BstMBI	GATC	5 cut(s)	324, 609, 651, 837, 1598
BstMCI	CGRYCG	1 cut(s)	612
BstMWI	GCNNNNNNNGC	8 cut(s)	492, 565, 578, 587, 755, 986, 1355, 1541
BstNI	CCWGG	2 cut(s)	729, 1565
BstSCI	CCNGG	5 cut(s)	510, 687, 727, 1232, 1563
BstSFI	CTRYAG	1 cut(s)	759
BstUI	CGCG	4 cut(s)	132, 147, 240, 959
BstV1I	GCAGC	5 cut(s)	733, 745, 1393, 1415, 1528
BstV2I	GAAGAC	1 cut(s)	635
BstX2I	RGATCY	1 cut(s)	1598
BstYI	RGATCY	1 cut(s)	1598
Bsu15I	ATCGAT	1 cut(s)	424
BsuI	GTATCC	1 cut(s)	1158
BsuRI	GGCC	2 cut(s)	506, 1326
BsuTUI	ATCGAT	1 cut(s)	424
BtgI	CCRYGG	3 cut(s)	957, 1005, 1536
BtsCI	GGATG	4 cut(s)	360, 505, 1036, 1177
BtsI	GCAGTG	1 cut(s)	597
BtsIMutI	CAGTG	4 cut(s)	597, 607, 1379, 1647
BveI	ACCTGC	1 cut(s)	1324
Cac8I	GCNNGC	3 cut(s)	570, 1224, 1450
CaiI	CAGNNNCTG	1 cut(s)	1130
CfoI	GCGC	4 cut(s)	149, 469, 847, 1085
Cfr10I	RCCGGY	1 cut(s)	346
Cfr13I	GGNCC	3 cut(s)	142, 1324, 1489
Cfr42I	CCGCGG	1 cut(s)	960
ClaI	ATCGAT	1 cut(s)	424
CseI	GACGC	2 cut(s)	121, 628
Csp6I	GTAC	5 cut(s)	526, 829, 921, 1000, 1470
CviAII	CATG	4 cut(s)	397, 953, 1537, 1546
CviQI	GTAC	5 cut(s)	526, 829, 921, 1000, 1470
DdeI	CTNAG	5 cut(s)	204, 981, 1098, 1113, 1602
DpnI	GATC	5 cut(s)	326, 611, 653, 839, 1600
DpnII	GATC	5 cut(s)	324, 609, 651, 837, 1598
DraIII	CACNNNGTG	1 cut(s)	1376
Eam1104I	CTCTTC	2 cut(s)	336, 476
EarI	CTCTTC	2 cut(s)	336, 476
EciI	GGCGGA	1 cut(s)	899
Eco130I	CCWWGG	1 cut(s)	1536
Eco24I	GRGCYC	1 cut(s)	408
Eco31I	GGTCTC	1 cut(s)	305
Eco32I	GATATC	2 cut(s)	1104, 1551
Eco47I	GGWCC	2 cut(s)	142, 1489
Eco57I	CTGAAG	1 cut(s)	817
EcoNI	CCTNNNNNAGG	1 cut(s)	1331
EcoO109I	RGGNCCY	1 cut(s)	1324
EcoRI	GAATTC	1 cut(s)	1303
EcoRII	CCWGG	2 cut(s)	727, 1563
EcoRV	GATATC	2 cut(s)	1104, 1551
EcoT14I	CCWWGG	1 cut(s)	1536
EcoT38I	GRGCYC	1 cut(s)	408
ErhI	CCWWGG	1 cut(s)	1536
Esp3I	CGTCTC	1 cut(s)	845
FaeI	CATG	4 cut(s)	400, 956, 1540, 1549
FalI	AAGNNNNNCTT	2 cut(s)	470, 502
FaqI	GGGAC	2 cut(s)	746, 1249
FatI	CATG	4 cut(s)	396, 952, 1536, 1545
FauI	CCCGC	1 cut(s)	137
Fnu4HI	GCNGC	7 cut(s)	725, 747, 759, 957, 1404, 1407, 1542
FokI	GGATG	4 cut(s)	367, 512, 1043, 1184
FriOI	GRGCYC	1 cut(s)	408
Fsp4HI	GCNGC	7 cut(s)	725, 747, 759, 957, 1404, 1407, 1542
FspI	TGCGCA	1 cut(s)	1084
GlaI	GCGC	4 cut(s)	148, 468, 846, 1084
GluI	GCNGC	7 cut(s)	725, 747, 759, 957, 1404, 1407, 1542
GsaI	CCCAGC	4 cut(s)	203, 648, 1029, 1302
GsuI	CTGGAG	3 cut(s)	656, 869, 1184
HaeIII	GGCC	2 cut(s)	506, 1326
HapII	CCGG	5 cut(s)	347, 512, 689, 940, 1233
HgaI	GACGC	2 cut(s)	121, 628
HhaI	GCGC	4 cut(s)	149, 469, 847, 1085
Hin1I	GRCGYC	1 cut(s)	153
Hin1II	CATG	4 cut(s)	400, 956, 1540, 1549
Hin6I	GCGC	4 cut(s)	147, 467, 845, 1083
HinP1I	GCGC	4 cut(s)	147, 467, 845, 1083
HindIII	AAGCTT	2 cut(s)	375, 1628
HinfI	GANTC	8 cut(s)	278, 562, 631, 1111, 1175, 1379, 1438, 1609
HpaII	CCGG	5 cut(s)	347, 512, 689, 940, 1233
HphI	GGTGA	4 cut(s)	204, 661, 1496, 1618
Hpy166II	GTNNAC	1 cut(s)	921
Hpy188I	TCNGA	7 cut(s)	55, 116, 418, 670, 795, 1152, 1603
Hpy8I	GTNNAC	1 cut(s)	921
Hpy99I	CGWCG	4 cut(s)	137, 155, 622, 829
HpyAV	CCTTC	7 cut(s)	88, 394, 709, 939, 1031, 1036, 1628
HpyCH4III	ACNGT	6 cut(s)	23, 602, 1009, 1316, 1374, 1642
HpyCH4IV	ACGT	2 cut(s)	153, 827
HpyCH4V	TGCA	7 cut(s)	581, 590, 761, 817, 1012, 1333, 1403
HpyF10VI	GCNNNNNNNGC	8 cut(s)	492, 565, 578, 587, 755, 986, 1355, 1541
HpyF3I	CTNAG	5 cut(s)	204, 981, 1098, 1113, 1602
HpySE526I	ACGT	2 cut(s)	153, 827
Hsp92I	GRCGYC	1 cut(s)	153
Hsp92II	CATG	4 cut(s)	400, 956, 1540, 1549
HspAI	GCGC	4 cut(s)	147, 467, 845, 1083
KspI	CCGCGG	1 cut(s)	960
Kzo9I	GATC	5 cut(s)	324, 609, 651, 837, 1598
LguI	GCTCTTC	2 cut(s)	336, 476
LmnI	GCTCC	4 cut(s)	105, 403, 682, 931
Lsp1109I	GCAGC	5 cut(s)	733, 745, 1393, 1415, 1528
LweI	GCATC	2 cut(s)	345, 577
MaeII	ACGT	2 cut(s)	153, 827
MaeIII	GTNAC	3 cut(s)	455, 770, 1063
MalI	GATC	5 cut(s)	326, 611, 653, 839, 1600
MboI	GATC	5 cut(s)	324, 609, 651, 837, 1598
MboII	GAAGA	8 cut(s)	25, 353, 487, 490, 493, 640, 646, 1270
MflI	RGATCY	1 cut(s)	1598
MhlI	GDGCHC	2 cut(s)	408, 687
MlyI	GAGTC	2 cut(s)	625, 1105
MmeI	TCCRAC	4 cut(s)	42, 78, 139, 576
MseI	TTAA	4 cut(s)	336, 678, 699, 996
MspA1I	CMGCKG	3 cut(s)	959, 1298, 1406
MspI	CCGG	5 cut(s)	347, 512, 689, 940, 1233
MspR9I	CCNGG	5 cut(s)	512, 689, 729, 1234, 1565
Mva1269I	GAATGC	2 cut(s)	760, 1360
MvaI	CCWGG	2 cut(s)	729, 1565
MvnI	CGCG	4 cut(s)	132, 147, 240, 959
MwoI	GCNNNNNNNGC	8 cut(s)	492, 565, 578, 587, 755, 986, 1355, 1541
NciI	CCSGG	3 cut(s)	512, 689, 1234
NcoI	CCATGG	1 cut(s)	1536
NdeII	GATC	5 cut(s)	324, 609, 651, 837, 1598
NlaIII	CATG	4 cut(s)	400, 956, 1540, 1549
NlaIV	GGNNCC	5 cut(s)	405, 723, 944, 988, 1325
NmeAIII	GCCGAG	1 cut(s)	1015
NmuCI	GTSAC	2 cut(s)	770, 1063
NsbI	TGCGCA	1 cut(s)	1084
PciSI	GCTCTTC	2 cut(s)	336, 476
PcsI	WCGNNNNNNNCGW	2 cut(s)	159, 614
PctI	GAATGC	2 cut(s)	760, 1360
PfeI	GAWTC	6 cut(s)	278, 562, 1175, 1379, 1438, 1609
PflFI	GACNNNGTC	1 cut(s)	1126
PflMI	CCANNNNNTGG	1 cut(s)	1140
PkrI	GCNGC	7 cut(s)	726, 748, 760, 958, 1405, 1408, 1543
Ple19I	CGATCG	1 cut(s)	612
PleI	GAGTC	2 cut(s)	625, 1105
PpsI	GAGTC	2 cut(s)	625, 1105
Psp6I	CCWGG	2 cut(s)	727, 1563
PspFI	CCCAGC	4 cut(s)	199, 644, 1025, 1298
PspGI	CCWGG	2 cut(s)	727, 1563
PspN4I	GGNNCC	5 cut(s)	405, 723, 944, 988, 1325
PspPI	GGNCC	3 cut(s)	142, 1324, 1489
PstI	CTGCAG	1 cut(s)	763
PstNI	CAGNNNCTG	1 cut(s)	1130
PsuI	RGATCY	1 cut(s)	1598
PsyI	GACNNNGTC	1 cut(s)	1126
PvuI	CGATCG	1 cut(s)	612
PvuII	CAGCTG	2 cut(s)	1298, 1406
RsaI	GTAC	5 cut(s)	527, 830, 922, 1001, 1471
RsaNI	GTAC	5 cut(s)	526, 829, 921, 1000, 1470
SacII	CCGCGG	1 cut(s)	960
SapI	GCTCTTC	2 cut(s)	336, 476
SaqAI	TTAA	4 cut(s)	336, 678, 699, 996
SatI	GCNGC	7 cut(s)	725, 747, 759, 957, 1404, 1407, 1542
Sau3AI	GATC	5 cut(s)	324, 609, 651, 837, 1598
Sau96I	GGNCC	3 cut(s)	142, 1324, 1489
ScaI	AGTACT	2 cut(s)	527, 1001
SchI	GAGTC	2 cut(s)	625, 1105
ScrFI	CCNGG	5 cut(s)	512, 689, 729, 1234, 1565
SduI	GDGCHC	2 cut(s)	408, 687
SfaNI	GCATC	2 cut(s)	345, 577
SfcI	CTRYAG	1 cut(s)	759
Sfr303I	CCGCGG	1 cut(s)	960
SgrBI	CCGCGG	1 cut(s)	960
SinI	GGWCC	2 cut(s)	142, 1489
SmlI	CTYRAG	3 cut(s)	95, 359, 521
SmoI	CTYRAG	3 cut(s)	95, 359, 521
SsiI	CCGC	8 cut(s)	130, 145, 232, 238, 725, 884, 957, 959
StyD4I	CCNGG	5 cut(s)	510, 687, 727, 1232, 1563
StyI	CCWWGG	1 cut(s)	1536
TaaI	ACNGT	6 cut(s)	23, 602, 1009, 1316, 1374, 1642
TaiI	ACGT	2 cut(s)	156, 830
TaqI	TCGA	7 cut(s)	281, 305, 424, 608, 662, 824, 1360
TatI	WGTACW	3 cut(s)	525, 920, 999
TauI	GCSGC	2 cut(s)	727, 959
TfiI	GAWTC	6 cut(s)	278, 562, 1175, 1379, 1438, 1609
Tru1I	TTAA	4 cut(s)	336, 678, 699, 996
Tru9I	TTAA	4 cut(s)	336, 678, 699, 996
TscAI	CASTG	4 cut(s)	597, 607, 1379, 1647
TseFI	GTSAC	2 cut(s)	770, 1063
TseI	GCWGC	5 cut(s)	746, 758, 1403, 1406, 1541
Tsp45I	GTSAC	2 cut(s)	770, 1063
TspDTI	ATGAA	2 cut(s)	413, 941
TspRI	CASTG	4 cut(s)	597, 607, 1379, 1647
Tth111I	GACNNNGTC	1 cut(s)	1126
Van91I	CCANNNNNTGG	1 cut(s)	1140
VpaK11BI	GGWCC	2 cut(s)	142, 1489
XagI	CCTNNNNNAGG	1 cut(s)	1331
XapI	RAATTY	6 cut(s)	254, 386, 439, 819, 1303, 1363
ZraI	GACGTC	1 cut(s)	154
ZrmI	AGTACT	2 cut(s)	527, 1001

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.