Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001783

Physical Location & Seq

Genomic Coordinates Reverse (-)

1755696 .. 1758652

Gene Structure 2957 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0027400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2865 bp

ATGGCTGAAGCACTCATCTTGATGCTTCTAGAGAAATTGGCTTCTGTAACTTTTCAACTCACAGAAAAAAAGGTGAGACTGGTTTTGGATGTTGAGAAAGAAGTTGAAGAATTCACTGGAACTCTTGAAGCAATTCAAGCTGTGCTTGAGGATGCAGAGCAGAAGCAAGTCAAGGATGTAAGCGTGAGGAATTGGTTGGATAAGCTGAAGGAAGTGTCCTTTAAGATGGATGACGTGCTGGATGAGTGGAACACTGAAATTCTGAGACAACAAGTTGAGAATCAAGAAACAAACAATGAAACTGCTCTTGTTACCAAGAAGAAGGTATGGTTCTCTATACCCTCTCATTGCTTTTGTTTTGCTCAAGTCAGTAGGGTAATTCTTCGTCGTGATATTGCACTCAACATAAAAGATCTGAATGATAAGCTAACTGTCATTGCTAATCAAAGGCAAGCATATAACTTGCAATCCATAGAAAGAAGTGCGGAACAACCTGAGCGAAAGAAGAGTTCATCTTTTGTTGATATATCCAAAGTTTTTGGTCGTGACAATGAAAAAGATATTTTGATAAGCAGATTGTTGAGTGAGAATAGTCAAGAAGAGAGGGCACTCCTTGTCATCCCTATCATAGGCATGGGAGGAGTTGGTAAGACAACTCTTACCCAACTAGTGTATAATGATGAAACTGTTAAATCCCATTTTGAGATGAGAATATGGGTTTGTGTCTCAGACCCTTTTGATGAGATCAAGATTGCCAAAGCCATTACTGATGGTAATGGTGTTTCAAATTCAGATGAGTTAGAAGCTGTCTTGCAATGCATGTCTAAATCCATTGAGGGGAAAAAGTTTCTCCTTGTCTTAGATGATGTATGGACCCAAAATCATACAAAGTGGGAACAATTAGAGTTACCTTTAATGCAGAATTGTGGTAAAGGTAGTAGAATAATTGTGACCACAAGAAAAGAGGAGGTCGCTATTATGATGGGAGCAACCCCTCACATGATGCACTTGAAGCAGTTGAGTATGCAAAATTGCTTGTCATTGTTCAATCACATTGTGTTTCTTGATAGGAAAGAGGATGAGTCTACTGTCTTCCGAGCTATTGGTGAGGGAATTGTGAAAAAATGTAAGGGTTTGCCACTTGCTGCAAAGACTTTGGCGAGCCTCATGCGCTATAAGAAGACGATGAAAGAGTGGCAAGATGTTTTGGACAGTAAGATTTGGGATATAGAAGGGTTTGAGCAACAAGTTTTTCAACCACTTTTTCTCAGTTATCATGATTTGGCCCCTGCTGTCAGACGTTGTCTGTTATACTGTGCTACTTTTCCAAAAGATTATGTGTTTGATAAAAGTATCTTGATTGAGCTCTGGATGTCACAAGACTATCTTCATTCAAGAGGGAACCATGAAAAAGAAGTCGTTGGTCAGATCTTTTTTGATAACTTAGTAATGCGCTCTTTCTTCCAAGATCTTGTGGATGATGAGTTTGACAAGCTTACTGTGCGTTGCAAAATGCATGATATTGTTCATGACTTTGTGCAGTCCCTCACTGAGAAAGAATGTGTCATTATGGAGTTATCTGGTGCAAACAAAATAAGAGAGCCACTAGTGAGTAATAAGTTGCGCCATTTCACCTTAATGTCTGCACCTGAGGGTCCATTCCCATCTTCTATTTCATTTCAGAATTACAAGAATCTGTGTACTCTCACTACTTTTGATTGCAAAATTTCTGCCATAGACTCGAAGTTCATTTCAGAACTGAAATGTCTAAGAACATTAAATTTGAGTCACAATCGCCTCCAAGAGCTTCCAGAGAACATTGGTTATTTGATACATTTGAGGTATCTTGACTTGTCTTTTAATCGTTCTTTGAAGAAATTACCCACCACTTTAGGTAATTTATTCAATCTGCAAACCTTGCGCCTTCTGCGCTGCAGGGCACTTAAAGAACTCCCTAAGAGCATGGGAAAGCTGATTAGCCTAAGACATCTTTACATTCAGTTTTGTGATCAGCTGAAGTACCTGCCAAAAGGGATTTGCAGATTAACAAGCTTGCAAACACTAGATATGTGCCCTGTTTATGGCAGTGAAGATGATGAAGCATTCAAGTTGGGGGATTTGGGAAGCTTGGACCAGCTTCAGGGTGCTCTCACCATAAAAGTTTTGGGGGATGGGAAGGATGCAAATGAGGCTGAGAATGCCCGTATGTGGAATAAAAAACAACTTTTTTATTTGGGAGTTGATACTTGCAATGAGGACAACATGAGAAGAAAAAGCAATGTGAAGATTTTGAATCTCTTACAACCACATCAAGATTTAAATTCATTAGAGATTTCTGTGTATGATGGCACCACCTGGCCTAGTTGGATAATGTCTTTGTACAATTTGAGAGTACTTAGTCTTGATTCTTGTATGTGTGAGTTTTTGCCTCCTCTTGGGAAATTACCATTCCTTGAGAAGCTGTCAGTGAGCTATATGAGAAGACTGAAAAGGGTTGGAGTTGAATTTCTGGGGATAGAAGAAGCTCAAACATCAAGACAATCATCTAAACGTACTGTTTTGTTCCCAAAATTAAAACAACTTCTGTTTTGGCGATTGGGGTGGTTGGAAGAGTGGAACGGAATGGAAGGGTGGAAGGAAGAAGACTCTGACATTACAATAATGCCATGCCTTTCTAGCTTAAGAATTATGGACTGCAAAAGCCTCAAATTGCTGCCAGACTTCTTGCGAAGATCACAACTGCAGAGTCTTGAAATCATTGGATGTTGGACTCTTGCCAAATGTTGTGAAGAAAGCAGAGGAAGGGAGTGGCCCAAGATTTCTCATATCCCAAACATCAAAGTTGAATACTGGGGGAATATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031090 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

954

Amino Acids

110.12

Weight (kDa)

6.55

Isoelectric Point (pI)

48.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	11 - 96	1.4e-21	Rx N-terminal domain
NB-ARC	PF00931	185 - 356	3.5e-33	NB-ARC domain
WHD_DRP	PF23559	442 - 513	4.8e-21	Disease resistance protein Winged helix domain
LRR_14	PF23598	569 - 896	1.1e-28	Leucine-rich repeat region
LRR_8	PF13855	574 - 622	1.7e-06	Leucine rich repeat
LRR_R13L1-DRL21	PF25019	704 - 826	1e-25	R13L1/DRL21 LRRs
LRR_RPS2	PF23247	792 - 922	5.2e-06	Plant disease resistance protein RPS2-like, leucine-rich repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001783)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30410 AT1G30410 AT1G30410 AT1G30410 AT1G30410 AT1G30410 AT1G30420 AT1G30420
fragaria_vesca	FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_3g09710 FvH4_3g09720
malus_domestica	MD10G1255300.v1.1 MD10G1255500.v1.1
prunus_persica	Prupe.4G088600_v2.0.a1 Prupe.4G088600_v2.0.a1
pyrus_communis	pycom10g21050
rosa_chinensis	RchiOBHm_Chr3g0492011 RchiOBHm_Chr5g0015441 RchiOBHm_Chr5g0015451 RchiOBHm_Chr5g0015481 RchiOBHm_Chr5g0015491
rosa_laevigata	RLG00000032199 RLG00000032201 RLG00000032202
rosa_multiflora	Rmu_sc0019960.1_g000002
rosa_roxburghii	Rroxscaffold_1G00061020 Rroxscaffold_1G00061040 Rroxscaffold_1G00061050 Rroxscaffold_6G00392640
rosa_rugosa	Rorug03G0251100 Rorug05G0027400 Rorug05G0027500 Rorug05G0027700
rosa_samantha	Rh3AG301500 Rh5AG121000 Rh5AG121100 Rh5CG130600 Rh5DG118900 Rh5DG119000
rosa_wichuraiana	Rw5G010450 Rw5G010470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2031
AccB1I	GGYRCC	1 cut(s)	2348
AccI	GTMKAC	1 cut(s)	1085
AciI	CCGC	1 cut(s)	485
AcsI	RAATTY	7 cut(s)	110, 258, 787, 1725, 1780, 2320, 2504
AcuI	CTGAAG	4 cut(s)	27, 227, 2036, 2123
AdeI	CACNNNGTG	1 cut(s)	1057
AfaI	GTAC	5 cut(s)	1702, 2021, 2381, 2394, 2554
AfiI	CCNNNNNNNGG	6 cut(s)	629, 837, 2081, 2140, 2208, 2435
AflII	CTTAAG	1 cut(s)	2680
AhlI	ACTAGT	2 cut(s)	667, 1606
AjiI	CACGTC	1 cut(s)	235
AjnI	CCWGG	1 cut(s)	2354
Alw21I	GWGCWC	2 cut(s)	1368, 2149
Alw26I	GTCTC	3 cut(s)	70, 259, 730
AoxI	GGCC	3 cut(s)	1284, 2357, 2810
ApeKI	GCWGC	3 cut(s)	1145, 1932, 2713
ApoI	RAATTY	7 cut(s)	110, 258, 787, 1725, 1780, 2320, 2504
Asp700I	GAANNNNTTC	1 cut(s)	132
AspLEI	GCGC	5 cut(s)	1173, 1455, 1626, 1923, 1932
AspS9I	GGNCC	5 cut(s)	873, 1285, 1655, 2131, 2811
AsuHPI	GGTGA	4 cut(s)	85, 1118, 1624, 2143
AvaII	GGWCC	3 cut(s)	873, 1655, 2131
AxyI	CCTNAGG	1 cut(s)	1650
BaeGI	GKGCMC	3 cut(s)	610, 1942, 2075
BanI	GGYRCC	1 cut(s)	2348
BanII	GRGCYC	1 cut(s)	1368
BbsI	GAAGAC	4 cut(s)	1084, 1187, 2488, 2649
Bbv12I	GWGCWC	2 cut(s)	1368, 2149
BbvI	GCAGC	3 cut(s)	1132, 1919, 2700
BccI	CCATC	6 cut(s)	220, 764, 976, 1672, 2165, 2339
BcgI	CGANNNNNNTGC	2 cut(s)	1150, 1184
BciT130I	CCWGG	1 cut(s)	2356
BclI	TGATCA	1 cut(s)	2008
BcoDI	GTCTC	3 cut(s)	70, 259, 730
BcuI	ACTAGT	2 cut(s)	667, 1606
BfaI	CTAG	6 cut(s)	29, 668, 1607, 2063, 2361, 2676
BfmI	CTRYAG	2 cut(s)	1933, 2741
BfrI	CTTAAG	1 cut(s)	2680
BfuAI	ACCTGC	1 cut(s)	2031
BglII	AGATCT	3 cut(s)	412, 1428, 1468
BisI	GCNGC	3 cut(s)	1146, 1933, 2714
BlsI	GCNGC	3 cut(s)	1147, 1934, 2715
BmcAI	AGTACT	1 cut(s)	2394
Bme1390I	CCNGG	1 cut(s)	2356
Bme18I	GGWCC	3 cut(s)	873, 1655, 2131
BmgBI	CACGTC	1 cut(s)	235
BmgT120I	GGNCC	5 cut(s)	873, 1285, 1655, 2131, 2811
BmiI	GGNNCC	5 cut(s)	875, 1287, 1403, 1656, 2350
BmrFI	CCNGG	1 cut(s)	2356
BmrI	ACTGGG	1 cut(s)	2860
BmsI	GCATC	4 cut(s)	12, 142, 993, 2170
BmuI	ACTGGG	1 cut(s)	2860
BpiI	GAAGAC	4 cut(s)	1084, 1187, 2488, 2649
Bpu10I	CCTNAGC	1 cut(s)	495
BpuEI	CTTGAG	3 cut(s)	167, 348, 2474
Bsc4I	CCNNNNNNNGG	6 cut(s)	629, 837, 2081, 2140, 2208, 2435
Bse1I	ACTGG	3 cut(s)	84, 121, 2855
Bse21I	CCTNAGG	1 cut(s)	1650
Bse3DI	GCAATG	5 cut(s)	346, 435, 821, 2257, 2284
BseBI	CCWGG	1 cut(s)	2356
BseLI	CCNNNNNNNGG	6 cut(s)	629, 837, 2081, 2140, 2208, 2435
BseMI	GCAATG	5 cut(s)	346, 435, 821, 2257, 2284
BseMII	CTCAG	7 cut(s)	254, 486, 741, 1282, 1542, 1641, 2184
BseNI	ACTGG	3 cut(s)	84, 121, 2855
BseRI	GAGGAG	3 cut(s)	654, 980, 2421
BseSI	GKGCMC	3 cut(s)	610, 1942, 2075
BseXI	GCAGC	3 cut(s)	1132, 1919, 2700
BsgI	GTGCAG	2 cut(s)	1559, 1629
BshFI	GGCC	3 cut(s)	1286, 2359, 2812
BshNI	GGYRCC	1 cut(s)	2348
BsiHKAI	GWGCWC	2 cut(s)	1368, 2149
BslFI	GGGAC	1 cut(s)	1528
BslI	CCNNNNNNNGG	6 cut(s)	629, 837, 2081, 2140, 2208, 2435
BsmAI	GTCTC	3 cut(s)	70, 259, 730
BsmFI	GGGAC	1 cut(s)	1528
BsmI	GAATGC	2 cut(s)	2102, 2203
BsnI	GGCC	3 cut(s)	1286, 2359, 2812
Bsp1286I	GDGCHC	5 cut(s)	610, 1368, 1942, 2075, 2149
Bsp1407I	TGTACA	1 cut(s)	2379
Bsp143I	GATC	6 cut(s)	412, 744, 1428, 1468, 2008, 2732
BspACI	CCGC	1 cut(s)	485
BspANI	GGCC	3 cut(s)	1286, 2359, 2812
BspCNI	CTCAG	7 cut(s)	255, 487, 740, 1281, 1543, 1642, 2185
BspHI	TCATGA	2 cut(s)	1276, 1528
BspLI	GGNNCC	5 cut(s)	875, 1287, 1403, 1656, 2350
BspMAI	CTGCAG	2 cut(s)	1937, 2745
BspMI	ACCTGC	1 cut(s)	2031
BspT107I	GGYRCC	1 cut(s)	2348
BspTI	CTTAAG	1 cut(s)	2680
BsrDI	GCAATG	5 cut(s)	346, 435, 821, 2257, 2284
BsrGI	TGTACA	1 cut(s)	2379
BsrI	ACTGG	3 cut(s)	84, 121, 2855
BssMI	GATC	6 cut(s)	412, 744, 1428, 1468, 2008, 2732
Bst2UI	CCWGG	1 cut(s)	2356
Bst4CI	ACNGT	7 cut(s)	433, 688, 1090, 1214, 1316, 1501, 2557
Bst6I	CTCTTC	3 cut(s)	500, 594, 2604
BstAFI	CTTAAG	1 cut(s)	2680
BstAPI	GCANNNNNTGC	1 cut(s)	1918
BstAUI	TGTACA	1 cut(s)	2379
BstC8I	GCNNGC	3 cut(s)	453, 1162, 2054
BstENI	CCTNNNNNAGG	1 cut(s)	627
BstHHI	GCGC	5 cut(s)	1173, 1455, 1626, 1923, 1932
BstKTI	GATC	6 cut(s)	415, 747, 1431, 1471, 2011, 2735
BstMAI	GTCTC	3 cut(s)	70, 259, 730
BstMBI	GATC	6 cut(s)	412, 744, 1428, 1468, 2008, 2732
BstNI	CCWGG	1 cut(s)	2356
BstNSI	RCATGY	1 cut(s)	823
BstSCI	CCNGG	1 cut(s)	2354
BstSFI	CTRYAG	2 cut(s)	1933, 2741
BstSLI	GKGCMC	3 cut(s)	610, 1942, 2075
BstV1I	GCAGC	3 cut(s)	1132, 1919, 2700
BstV2I	GAAGAC	4 cut(s)	1084, 1187, 2488, 2649
BstX2I	RGATCY	3 cut(s)	412, 1428, 1468
BstYI	RGATCY	3 cut(s)	412, 1428, 1468
Bsu36I	CCTNAGG	1 cut(s)	1650
BsuRI	GGCC	3 cut(s)	1286, 2359, 2812
BtrI	CACGTC	1 cut(s)	235
BtsI	GCAGTG	1 cut(s)	2092
BtsIMutI	CAGTG	5 cut(s)	114, 252, 1548, 2092, 2472
BveI	ACCTGC	1 cut(s)	2031
Cac8I	GCNNGC	3 cut(s)	453, 1162, 2054
CciI	TCATGA	2 cut(s)	1276, 1528
CfoI	GCGC	5 cut(s)	1173, 1455, 1626, 1923, 1932
Cfr13I	GGNCC	5 cut(s)	873, 1285, 1655, 2131, 2811
Csp6I	GTAC	5 cut(s)	1701, 2020, 2380, 2393, 2553
CviQI	GTAC	5 cut(s)	1701, 2020, 2380, 2393, 2553
DpnI	GATC	6 cut(s)	414, 746, 1430, 1470, 2010, 2734
DpnII	GATC	6 cut(s)	412, 744, 1428, 1468, 2008, 2732
DraI	TTTAAA	1 cut(s)	2319
DraIII	CACNNNGTG	1 cut(s)	1057
Eam1104I	CTCTTC	3 cut(s)	500, 594, 2604
EarI	CTCTTC	3 cut(s)	500, 594, 2604
Ecl136II	GAGCTC	1 cut(s)	1366
Eco24I	GRGCYC	1 cut(s)	1368
Eco47I	GGWCC	3 cut(s)	873, 1655, 2131
Eco53kI	GAGCTC	1 cut(s)	1366
Eco57I	CTGAAG	4 cut(s)	27, 227, 2036, 2123
Eco81I	CCTNAGG	1 cut(s)	1650
EcoICRI	GAGCTC	1 cut(s)	1366
EcoNI	CCTNNNNNAGG	1 cut(s)	627
EcoRI	GAATTC	1 cut(s)	110
EcoRII	CCWGG	1 cut(s)	2354
EcoT22I	ATGCAT	2 cut(s)	821, 1518
EcoT38I	GRGCYC	1 cut(s)	1368
FalI	AAGNNNNNCTT	4 cut(s)	129, 161, 1371, 1403
FaqI	GGGAC	1 cut(s)	1528
FbaI	TGATCA	1 cut(s)	2008
FblI	GTMKAC	1 cut(s)	1085
Fnu4HI	GCNGC	3 cut(s)	1146, 1933, 2714
FriOI	GRGCYC	1 cut(s)	1368
Fsp4HI	GCNGC	3 cut(s)	1146, 1933, 2714
FspBI	CTAG	6 cut(s)	29, 668, 1607, 2063, 2361, 2676
GlaI	GCGC	5 cut(s)	1172, 1454, 1625, 1922, 1931
GluI	GCNGC	3 cut(s)	1146, 1933, 2714
HaeIII	GGCC	3 cut(s)	1286, 2359, 2812
HhaI	GCGC	5 cut(s)	1173, 1455, 1626, 1923, 1932
Hin6I	GCGC	5 cut(s)	1171, 1453, 1624, 1921, 1930
HinP1I	GCGC	5 cut(s)	1171, 1453, 1624, 1921, 1930
HindIII	AAGCTT	3 cut(s)	1493, 2050, 2125
HphI	GGTGA	4 cut(s)	85, 1118, 1624, 2143
Hpy166II	GTNNAC	2 cut(s)	1086, 1701
Hpy8I	GTNNAC	2 cut(s)	1086, 1701
Hpy99I	CGWCG	1 cut(s)	390
HpyAV	CCTTC	8 cut(s)	202, 316, 1226, 1934, 2170, 2621, 2629, 2796
HpyCH4III	ACNGT	7 cut(s)	433, 688, 1090, 1214, 1316, 1501, 2557
HpyCH4IV	ACGT	3 cut(s)	234, 1300, 2551
HpySE526I	ACGT	3 cut(s)	234, 1300, 2551
HspAI	GCGC	5 cut(s)	1171, 1453, 1624, 1921, 1930
Ksp22I	TGATCA	1 cut(s)	2008
Kzo9I	GATC	6 cut(s)	412, 744, 1428, 1468, 2008, 2732
LmnI	GCTCC	1 cut(s)	986
Lsp1109I	GCAGC	3 cut(s)	1132, 1919, 2700
LweI	GCATC	4 cut(s)	12, 142, 993, 2170
MaeI	CTAG	6 cut(s)	29, 668, 1607, 2063, 2361, 2676
MaeII	ACGT	3 cut(s)	234, 1300, 2551
MaeIII	GTNAC	7 cut(s)	46, 310, 545, 906, 949, 1374, 1787
MalI	GATC	6 cut(s)	414, 746, 1430, 1470, 2010, 2734
MboI	GATC	6 cut(s)	412, 744, 1428, 1468, 2008, 2732
MflI	RGATCY	3 cut(s)	412, 1428, 1468
MhlI	GDGCHC	5 cut(s)	610, 1368, 1942, 2075, 2149
MlyI	GAGTC	6 cut(s)	1091, 1733, 1795, 2639, 2755, 2764
MmeI	TCCRAC	5 cut(s)	177, 2345, 2476, 2586, 2747
Mph1103I	ATGCAT	2 cut(s)	821, 1518
MroXI	GAANNNNTTC	1 cut(s)	132
MslI	CAYNNNNRTG	3 cut(s)	20, 632, 1637
MspA1I	CMGCKG	1 cut(s)	2014
MspCI	CTTAAG	1 cut(s)	2680
MspR9I	CCNGG	1 cut(s)	2356
Mva1269I	GAATGC	2 cut(s)	2102, 2203
MvaI	CCWGG	1 cut(s)	2356
NdeII	GATC	6 cut(s)	412, 744, 1428, 1468, 2008, 2732
NlaIV	GGNNCC	5 cut(s)	875, 1287, 1403, 1656, 2350
NmuCI	GTSAC	4 cut(s)	545, 949, 1374, 1787
NsiI	ATGCAT	2 cut(s)	821, 1518
NspI	RCATGY	1 cut(s)	823
PagI	TCATGA	2 cut(s)	1276, 1528
PctI	GAATGC	2 cut(s)	2102, 2203
PdmI	GAANNNNTTC	1 cut(s)	132
PfeI	GAWTC	4 cut(s)	280, 1693, 2293, 2405
PflFI	GACNNNGTC	1 cut(s)	1302
PkrI	GCNGC	3 cut(s)	1147, 1934, 2715
PleI	GAGTC	6 cut(s)	1090, 1733, 1794, 2639, 2754, 2764
PpsI	GAGTC	6 cut(s)	1090, 1733, 1794, 2639, 2754, 2764
Psp124BI	GAGCTC	1 cut(s)	1368
Psp6I	CCWGG	1 cut(s)	2354
PspGI	CCWGG	1 cut(s)	2354
PspN4I	GGNNCC	5 cut(s)	875, 1287, 1403, 1656, 2350
PspPI	GGNCC	5 cut(s)	873, 1285, 1655, 2131, 2811
PstI	CTGCAG	2 cut(s)	1937, 2745
PsuI	RGATCY	3 cut(s)	412, 1428, 1468
PsyI	GACNNNGTC	1 cut(s)	1302
PvuII	CAGCTG	1 cut(s)	2014
RsaI	GTAC	5 cut(s)	1702, 2021, 2381, 2394, 2554
RsaNI	GTAC	5 cut(s)	1701, 2020, 2380, 2393, 2553
RseI	CAYNNNNRTG	3 cut(s)	20, 632, 1637
SacI	GAGCTC	1 cut(s)	1368
SatI	GCNGC	3 cut(s)	1146, 1933, 2714
Sau3AI	GATC	6 cut(s)	412, 744, 1428, 1468, 2008, 2732
Sau96I	GGNCC	5 cut(s)	873, 1285, 1655, 2131, 2811
ScaI	AGTACT	1 cut(s)	2394
SchI	GAGTC	6 cut(s)	1091, 1733, 1795, 2639, 2755, 2764
ScrFI	CCNGG	1 cut(s)	2356
SduI	GDGCHC	5 cut(s)	610, 1368, 1942, 2075, 2149
SfaNI	GCATC	4 cut(s)	12, 142, 993, 2170
SfcI	CTRYAG	2 cut(s)	1933, 2741
SinI	GGWCC	3 cut(s)	873, 1655, 2131
SmiI	ATTTAAAT	1 cut(s)	2319
SmiMI	CAYNNNNRTG	3 cut(s)	20, 632, 1637
SmlI	CTYRAG	4 cut(s)	146, 363, 2453, 2680
SmoI	CTYRAG	4 cut(s)	146, 363, 2453, 2680
SpeI	ACTAGT	2 cut(s)	667, 1606
SsiI	CCGC	1 cut(s)	485
SspMI	CTAG	6 cut(s)	29, 668, 1607, 2063, 2361, 2676
SstI	GAGCTC	1 cut(s)	1368
StyD4I	CCNGG	1 cut(s)	2354
SwaI	ATTTAAAT	1 cut(s)	2319
TaaI	ACNGT	7 cut(s)	433, 688, 1090, 1214, 1316, 1501, 2557
TaiI	ACGT	3 cut(s)	237, 1303, 2554
TaqI	TCGA	1 cut(s)	1742
TatI	WGTACW	3 cut(s)	1700, 2379, 2392
TfiI	GAWTC	4 cut(s)	280, 1693, 2293, 2405
TscAI	CASTG	5 cut(s)	121, 259, 1555, 2092, 2472
TseFI	GTSAC	4 cut(s)	545, 949, 1374, 1787
TseI	GCWGC	3 cut(s)	1145, 1932, 2713
Tsp45I	GTSAC	4 cut(s)	545, 949, 1374, 1787
TspGWI	ACGGA	1 cut(s)	2634
TspRI	CASTG	5 cut(s)	121, 259, 1555, 2092, 2472
Tth111I	GACNNNGTC	1 cut(s)	1302
Vha464I	CTTAAG	1 cut(s)	2680
VpaK11BI	GGWCC	3 cut(s)	873, 1655, 2131
XagI	CCTNNNNNAGG	1 cut(s)	627
XapI	RAATTY	7 cut(s)	110, 258, 787, 1725, 1780, 2320, 2504
XbaI	TCTAGA	1 cut(s)	28
XceI	RCATGY	1 cut(s)	823
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2161
XmiI	GTMKAC	1 cut(s)	1085
XmnI	GAANNNNTTC	1 cut(s)	132
XspI	CTAG	6 cut(s)	29, 668, 1607, 2063, 2361, 2676
ZrmI	AGTACT	1 cut(s)	2394
Zsp2I	ATGCAT	2 cut(s)	821, 1518

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.