Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0001783

Physical Location & Seq

Genomic Coordinates Forward (+)

5656802 .. 5670691

Gene Structure 13890 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g09720.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4452 bp

ATGGGTTTTAAGGCAATAGACTGGTATTGTCAACCAGAAGCTAATGGGGTATGGGCCAAAGCAGTGAGTGTTTTTGGCTCATACACTCCTTGTGCAATGAACTCTATGGTCATCTGTATTTCTCATTTAGTTCTTTTGGGATTTTGCTGCTATCGAGTATGGATGATCAAGAAGAATTTGAAAGCCCGGAGGTTCAGGTTGAGGTCAAACTACTATAACTATTTGCTGGGATTGTTGGCTGGTTACTCCACTGCTGAGCCTCTACTGAGGTTGGTGATGGGTTTATCACTCTTTAACCCGTTTGGAAGAACTGGCTTTGCTCCTTTTGAGATGAATTCTTCGATCATTGAAGCTCTTGCTTGGTGCTCCATGCTAATTTTGATTGGCTTGGAAACTAAGATATACATTCGGGAATTCCGATGGTATGTAAGATTTGGAGTTCTTTATGTTTTGGTAGGAAATGCTGTGGTGCTAAATCTGATTCTTGGAGTGACAGTGACAGATGCTGACAGCGGATCTGCTCTGTGTCTGTATATAAGTACTGTCTGTTGCCAGATGCTGTTTGGAATTCTTCTTCTCTTCTATGTTCCTAATTTAGATCCTTATCCTGGCTACATTGTTCTGCAATCTGAGTCACTTGACAATGCTGAATATGAAGCACTACCAGGAGAAGATCAAATTTTCCCTGAACGGCATGCTAATATATTTTCCAGAATATATTTTGGATGGATGACTCCACTTATGCAGCTAGGGTACAGAAAACCCATCACTGAAACAGATGTTTGGAAGTTGGACACATGGGATCAGACCGAGACTTTGATTAAAAGGTTTCAGGAATGTTGGGCTGAAGAATCTCAGAGGTCCAAGCCATGGCTTCTGAGGGCACTCAATTGTAGCCTTGGACGAAGGTTCTGGTTGGGAGGCTTTTTCAAGGTTAGTTTCTTTTTTGCCAAAGACTTCCAAGTAAAGACTTACTTTACCATGTATAAACTATCATATCAAAAGCTTTCTATAAAGGAGTCAATGCAACGAGGTGATCCAGCTTGGATTGGTTACATATATGCCTTCTTAATTTTCATTGGTGTGTCATTTGGTGTGCTCCTTGCGTCTCAGTATTACCAGAATGTTCAGCATGTTGGCTTTTGGTTGAGATCAACTTTGGTGGCTGCTATATTCCGTAAATCTATAAGAATAACACACGAGGGCCGTAAGAAGTTCCCATCTGGGAAGATAACAAATATGATGTCTACAGATGCTGATGCGCTCCAGCAAACAGCCCGAATCCTTCACGGACTATGGTCAGCTCCTTTTCGTATCATTGTAGCTATGGTTCTTCTTTACCAACAATTAGGTGGTGCATCTCTTATTGGATCCTTGATGCTAGTTCTCACAATCCCCATCCAGACAACGTTGTTCAGCAAAATGCGGAAACTGACTAAGGATGGACTGCAACAGACTGACAAGCGAGTTGGCCTCATGAACGAAATTTTAGCTGCCATGGACACTGTGAAATGTTATTCATGGGAGACAAGTTTCCAGGAGCAAGTTCAAAATATACGAAATGATGAGCTTTCAAGGTTACGTAAAGCGCAATTACTATCTGCTTTGAACAATTTTATACTTAACAGCATCCCAGCTGTTGTGACAGTAACTTCATTTGGGGCGTTCACTTTCCTTGGAGGCGAATTGACACCTGCTAGGGCATTCACATCACTTTCTCTTTTTGCAGTGCTACGCTACCCTTTATTCATGCTACCCAACTTATTAAGTCAGCTTGTAAATGCAAATGTGTCCTTACAGCGTTTGGAGGAACTGTTTCTAACTGAGGAGAGATTTCTAGTACCCAACCCTCCTCTTGAACCAGGGCTTCCAGCCATCTCAATTCAGGATGGGTACTTTTCATGGGATTCAAAGGCAGAGAAGCCCACATTATCAAACATCAACTTAGATATCCCAATTGGTAGCTTAGTTGCAGTTGTTGGTGGCACTGGAGAAGGAAAGACATCACTTATATCAGCCATGCTTGGGGAGCTTCCTCCCATAAAAGATGCAGGTGTTACAATTAGGGGGACTGTTGCTTATGTTCCCCAAGTTTCATGGATTTTCAATGCTACTGTACGTGAAAACATTTTATTTGGATCTGCATTTGAAGCTGCACGGTATTGGAAGGCTATTGATGTAACTGAGTTCCATCATGACCTAGACTTACTTCCAGGTCGAGATCTTACGGAGATAGGTGAAAGAGGGGTCAATATTAGTGGAGGTCAAAAGCAAAGGGTTTCAATGGCCAGAGCTGTATATTCTAATTCAGATGTTTATATATTTGACGACCCATTAAGTGCTCTAGATGCTCATGTTGCCAGAGAGATTTTCAACGGCTGTATCAAGGAGGAGTTGCAGGGGAAAACTAGGGTGCTTGTCACAAATCAGCTACACTTTTTGCCTCAAGTGGATGAAATTATATTAGTCTCTGACGGTACGATTAAGGAGTTTGGAACCTTTAAGGATCTCTCTGAAAACAGTTTGCTGTTCCAGAAGCTTATGGAAAATGCTGGGAAAATGGATGAACATGTAGAAGAAAAGGAACACAGGAAAACTGATTACCAAGAAACCTCACTTCTTGTGTCTAATGGGGTGGTGGACGACGTGCCAAAAGATGCAAGCTACACCAAGAAACAGAAAGGGATGAAATCTGTACTGATTAACCAAGAGGAACGGGAAACAGGTGTTGTAAGTTGGAAAGTTTTACACAGGTATAAACATGCATTAGGAGGCCTATGGGTGGTCATGGTTCTATTTACTTGTTATACTCTTACTGAAGTTCTTCGAGTTTCAAGCAGCACATGGTTAAGTTTTTGGACAGATCAAAGCACATCAAAGAGTTATACACCTGGATTCTACATTCTTATATATGCAATTCTCTCAGTTGGTCAGGTAACGCTGACTCTGACGAACACTTTTTGGCTGATCACTTCAAGTCTTCGTGCAGCCCGACATTTGCATGATTTCCTTCTACATGCTATATTAAAAACTCCAATGATGTTCTTTCACACTAACCCAACTGGAAGGATAATCAATAGGTTTGCAAAGGATCTCGGTGATATAGATTGCAATGTAGCGAATTTTATGAACATGTTTCTGGGTCAAGTGTGGCAGCTCCTTTCAACTTTTGTGCTCATAGGAATTGTGAGCACAATATCCCTCTGGGCCATAATGCCTCTTCTAATTTTATTCTATGCAGCCTATATATTCTATCAGAGCACGTCCCGTGAAGTGAAACGCTTGGATTCCATTACGAGATCTCCTGTTTATGCACAATTTGGAGAAGCATTAAATGTTCAAGCCACTGGCTTTGATATAAGGTTGGAAACACTTGGAGGTATCATGATTTGGGTGATAGCAACCTTTGCTGTCATGCAGAATGGAAGAGCAGAAAACCAAGTACAATTTGCATCCACAATGGGTCTACTTCTTACTTATACTTTGAATATCACAAGTCTGTTGAGTGGTGTTCTTAGACAAGCTAGTAGGGCTGAAAATAGTTTAAATTCTGTTGAGCGGGTTGGAACATATATTGAATTGCCTTCTGAGGCTCCAGCTGTTATTGAAAGCAACCGTCCCCCACACGGGTGGCCATCATCAGGATCCATCAAGTTTGAGGATGTTGTCCTCCGTTATAGGCCTGGACTTCCACTAGTACTGCACGGATTATCGTTCGCAGTTTCTGCAAGTGAGAAGCTTGGAATAGTTGGTAGAACTGGTGCTGGAAAATCTAGCGTGATAAATGCATTGTTTAGGATAGTAGAAATAGTAAAAGGAAGCATCTTGATTGATGGTTGTGATGTTGCTAAGTTTGGACTGGCAGATTTGCGAAAAGTTCTTAGCATCATACCCCAATCACCGGTTCTCTTTTCAGGAACTGTACGGTTTAACCTTGATCCTTTCAGTGAGCATAATGATGCTGACCTCTGGGAAGCTCTAGAAAAAGCACATCTAAAGGATGTGATTGGGAGGAAATCCTTTGGTCTCAATGCTGAGGTTTCTGAGGGTGGTGAGAATTTCAGTGTTGGACAGAGGCAGCTAATTAGTCTTGCTAGAGCATTACTACGGAGATCAAAAATTATTGTTCTTGATGAAGCAACTGCAGCTGTGGATGTTAGAACTGATTCTCTTATCCAAGAAACCATTCGTGAAGAATTCAAATCATGCACCATGCTTGTTATTGCCCACAGATTGAACACCATTATCGACTGTGATCGAATTCTTCTTCTTGATGCTGGTCAGGTCATAGAACATGGTTCCCCACAAGAACTACTGCTAGATGAACAGAGCGCATTCTCAAAGATGGTTAGGAGTACAGGACCTTCTAATGCTCAGTACTTGCACAGCCTGGTGTTTGAAGATGAGAAGAATAAGATGAATAGAAACGAAATCAAGCAACTGGTTGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031090 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

1484

Amino Acids

166.57

Weight (kDa)

7.94

Isoelectric Point (pI)

35.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	344 - 582	3.1e-33	ABC transporter transmembrane region
ABC_tran	PF00005	644 - 779	4.9e-18	ABC transporter
ABC_membrane	PF00664	930 - 1112	2.2e-23	ABC transporter transmembrane region
ABC_tran	PF00005	1234 - 1382	4.5e-25	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0001783)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30410 AT1G30410 AT1G30410 AT1G30410 AT1G30410 AT1G30410 AT1G30420 AT1G30420
fragaria_vesca	FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_3g09710 FvH4_3g09720
malus_domestica	MD10G1255300.v1.1 MD10G1255500.v1.1
prunus_persica	Prupe.4G088600_v2.0.a1 Prupe.4G088600_v2.0.a1
pyrus_communis	pycom10g21050
rosa_chinensis	RchiOBHm_Chr3g0492011 RchiOBHm_Chr5g0015441 RchiOBHm_Chr5g0015451 RchiOBHm_Chr5g0015481 RchiOBHm_Chr5g0015491
rosa_laevigata	RLG00000032199 RLG00000032201 RLG00000032202
rosa_multiflora	Rmu_sc0019960.1_g000002
rosa_roxburghii	Rroxscaffold_1G00061020 Rroxscaffold_1G00061040 Rroxscaffold_1G00061050 Rroxscaffold_6G00392640
rosa_rugosa	Rorug03G0251100 Rorug05G0027400 Rorug05G0027500 Rorug05G0027700
rosa_samantha	Rh3AG301500 Rh5AG121000 Rh5AG121100 Rh5CG130600 Rh5DG118900 Rh5DG119000
rosa_wichuraiana	Rw5G010450 Rw5G010470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1702, 2042
Acc36I	ACCTGC	2 cut(s)	1702, 2042
AccB7I	CCANNNNNTGG	1 cut(s)	870
AccBSI	CCGCTC	1 cut(s)	3559
AccI	GTMKAC	2 cut(s)	1247, 3466
AciI	CCGC	3 cut(s)	513, 1426, 3559
AclI	AACGTT	1 cut(s)	1409
AcoI	YGGCCR	2 cut(s)	2286, 3632
AcuI	CTGAAG	2 cut(s)	867, 2838
AfiI	CCNNNNNNNGG	8 cut(s)	608, 870, 2025, 2782, 3626, 3627, 3641, 3901
AflIII	ACRYGT	2 cut(s)	2569, 3132
AgeI	ACCGGT	1 cut(s)	3901
AhlI	ACTAGT	1 cut(s)	3694
AjiI	CACGTC	2 cut(s)	2647, 3264
AjnI	CCWGG	8 cut(s)	607, 664, 1536, 1861, 2212, 2890, 3682, 4389
AjuI	GAANNNNNNNTTGG	4 cut(s)	3888, 3920, 4170, 4202
AleI	CACNNNNGTG	1 cut(s)	3628
Alw21I	GWGCWC	6 cut(s)	368, 1101, 2344, 3177, 3194, 3263
Alw26I	GTCTC	5 cut(s)	806, 1113, 1520, 2473, 4031
AlwNI	CAGNNNCTG	5 cut(s)	506, 559, 1256, 3725, 3920
AoxI	GGCC	8 cut(s)	54, 1204, 1471, 2286, 2773, 3207, 3632, 3680
ArsI	GACNNNNNNTTYG	4 cut(s)	799, 831, 1229, 1261
AsiGI	ACCGGT	1 cut(s)	3901
Asp700I	GAANNNNTTC	4 cut(s)	1815, 2823, 4165, 4185
AspLEI	GCGC	3 cut(s)	1264, 1591, 4334
AspS9I	GGNCC	5 cut(s)	54, 861, 1204, 3207, 4361
AsuC2I	CCSGG	1 cut(s)	187
AsuHPI	GGTGA	7 cut(s)	286, 1046, 2249, 3110, 3406, 3891, 4064
AvaII	GGWCC	2 cut(s)	861, 4361
BaeGI	GKGCMC	1 cut(s)	886
BaeI	ACNNNNGTAYC	2 cut(s)	2365, 2398
BalI	TGGCCA	2 cut(s)	2288, 3634
BamHI	GGATCC	2 cut(s)	1370, 3644
BarI	GAAGNNNNNNTAC	2 cut(s)	4348, 4380
BauI	CACGAG	1 cut(s)	1199
BbsI	GAAGAC	1 cut(s)	2972
Bbv12I	GWGCWC	6 cut(s)	368, 1101, 2344, 3177, 3194, 3263
BbvCI	CCTCAGC	1 cut(s)	4035
BceAI	ACGGC	3 cut(s)	707, 1191, 2392
BciT130I	CCWGG	8 cut(s)	609, 666, 1538, 1863, 2214, 2892, 3684, 4391
BclI	TGATCA	2 cut(s)	165, 2967
BcnI	CCSGG	1 cut(s)	187
BcoDI	GTCTC	5 cut(s)	806, 1113, 1520, 2473, 4031
BcuI	ACTAGT	1 cut(s)	3694
BfmI	CTRYAG	2 cut(s)	1248, 4143
BfuAI	ACCTGC	2 cut(s)	1702, 2042
BglII	AGATCT	2 cut(s)	2221, 3299
BlpI	GCTNAGC	1 cut(s)	255
BmcAI	AGTACT	3 cut(s)	541, 3699, 4379
Bme1390I	CCNGG	9 cut(s)	187, 609, 666, 1538, 1863, 2214, 2892, 3684, 4391
Bme18I	GGWCC	2 cut(s)	861, 4361
BmgBI	CACGTC	2 cut(s)	2647, 3264
BmgT120I	GGNCC	5 cut(s)	54, 861, 1204, 3207, 4361
BmiI	GGNNCC	5 cut(s)	1372, 2497, 3594, 3646, 4300
BmrFI	CCNGG	9 cut(s)	187, 609, 666, 1538, 1863, 2214, 2892, 3684, 4391
BoxI	GACNNNNGTC	1 cut(s)	1297
BpiI	GAAGAC	1 cut(s)	2972
BplI	GAGNNNNNCTC	2 cut(s)	1458, 1490
BpmI	CTGGAG	3 cut(s)	1250, 2010, 3579
Bpu10I	CCTNAGC	1 cut(s)	4035
Bpu1102I	GCTNAGC	1 cut(s)	255
BpuEI	CTTGAG	1 cut(s)	2430
BpuMI	CCSGG	1 cut(s)	187
BsaAI	YACGTR	2 cut(s)	1583, 2120
BsaBI	GATNNNNATC	1 cut(s)	603
BsaI	GGTCTC	1 cut(s)	4031
BsaJI	CCNNGG	5 cut(s)	869, 898, 1497, 1675, 1862
BsaWI	WCCGGW	1 cut(s)	3901
BsaXI	ACNNNNNCTCC	6 cut(s)	480, 510, 1799, 1829, 3286, 3316
Bsc4I	CCNNNNNNNGG	8 cut(s)	608, 870, 2025, 2782, 3626, 3627, 3641, 3901
Bse118I	RCCGGY	1 cut(s)	3901
Bse1I	ACTGG	8 cut(s)	26, 316, 1993, 3067, 3352, 3763, 3864, 4446
Bse3DI	GCAATG	2 cut(s)	102, 3118
Bse8I	GATNNNNATC	1 cut(s)	603
BseBI	CCWGG	8 cut(s)	609, 666, 1538, 1863, 2214, 2892, 3684, 4391
BseDI	CCNNGG	5 cut(s)	869, 898, 1497, 1675, 1862
BseJI	GATNNNNATC	1 cut(s)	603
BseLI	CCNNNNNNNGG	8 cut(s)	608, 870, 2025, 2782, 3626, 3627, 3641, 3901
BseMI	GCAATG	2 cut(s)	102, 3118
BseNI	ACTGG	8 cut(s)	26, 316, 1993, 3067, 3352, 3763, 3864, 4446
BseRI	GAGGAG	3 cut(s)	1841, 1842, 2405
BseSI	GKGCMC	1 cut(s)	886
BseYI	CCCAGC	3 cut(s)	226, 1633, 2552
BsgI	GTGCAG	3 cut(s)	2139, 3006, 3686
BshFI	GGCC	8 cut(s)	56, 1206, 1473, 2288, 2775, 3209, 3634, 3682
BshTI	ACCGGT	1 cut(s)	3901
BsiHKAI	GWGCWC	6 cut(s)	368, 1101, 2344, 3177, 3194, 3263
BsiSI	CCGG	2 cut(s)	187, 3902
BslFI	GGGAC	3 cut(s)	2083, 3250, 3603
BslI	CCNNNNNNNGG	8 cut(s)	608, 870, 2025, 2782, 3626, 3627, 3641, 3901
BsmAI	GTCTC	5 cut(s)	806, 1113, 1520, 2473, 4031
BsmBI	CGTCTC	1 cut(s)	1113
BsmFI	GGGAC	3 cut(s)	2083, 3250, 3603
BsmI	GAATGC	2 cut(s)	1703, 4334
BsnI	GGCC	8 cut(s)	56, 1206, 1473, 2288, 2775, 3209, 3634, 3682
Bso31I	GGTCTC	1 cut(s)	4031
Bsp1286I	GDGCHC	7 cut(s)	368, 886, 1101, 2344, 3177, 3194, 3263
Bsp1720I	GCTNAGC	1 cut(s)	255
Bsp19I	CCATGG	2 cut(s)	869, 1497
BspACI	CCGC	3 cut(s)	513, 1426, 3559
BspANI	GGCC	8 cut(s)	56, 1206, 1473, 2288, 2775, 3209, 3634, 3682
BspHI	TCATGA	3 cut(s)	1476, 2194, 3384
BspLI	GGNNCC	5 cut(s)	1372, 2497, 3594, 3646, 4300
BspMAI	CTGCAG	1 cut(s)	4147
BspMI	ACCTGC	2 cut(s)	1702, 2042
BspQI	GCTCTTC	1 cut(s)	3421
BspTNI	GGTCTC	1 cut(s)	4031
BsrBI	CCGCTC	1 cut(s)	3559
BsrDI	GCAATG	2 cut(s)	102, 3118
BsrFI	RCCGGY	1 cut(s)	3901
BsrI	ACTGG	8 cut(s)	26, 316, 1993, 3067, 3352, 3763, 3864, 4446
BssAI	RCCGGY	1 cut(s)	3901
BssECI	CCNNGG	5 cut(s)	869, 898, 1497, 1675, 1862
BssSI	CACGAG	1 cut(s)	1199
BssT1I	CCWWGG	4 cut(s)	869, 898, 1497, 1675
Bst2BI	CACGAG	1 cut(s)	1199
Bst2UI	CCWGG	8 cut(s)	609, 666, 1538, 1863, 2214, 2892, 3684, 4391
Bst6I	CTCTTC	3 cut(s)	584, 3225, 3421
BstAPI	GCANNNNNTGC	2 cut(s)	3407, 3725
BstBAI	YACGTR	2 cut(s)	1583, 2120
BstC8I	GCNNGC	2 cut(s)	696, 2662
BstDSI	CCRYGG	2 cut(s)	869, 1497
BstHHI	GCGC	3 cut(s)	1264, 1591, 4334
BstMAI	GTCTC	5 cut(s)	806, 1113, 1520, 2473, 4031
BstMWI	GCNNNNNNNGC	8 cut(s)	2029, 2150, 2348, 2357, 3407, 3530, 3725, 4145
BstNI	CCWGG	8 cut(s)	609, 666, 1538, 1863, 2214, 2892, 3684, 4391
BstNSI	RCATGY	6 cut(s)	698, 1136, 2573, 2765, 3020, 3136
BstPAI	GACNNNNGTC	1 cut(s)	1297
BstSCI	CCNGG	9 cut(s)	185, 607, 664, 1536, 1861, 2212, 2890, 3682, 4389
BstSFI	CTRYAG	2 cut(s)	1248, 4143
BstSLI	GKGCMC	1 cut(s)	886
BstSNI	TACGTA	1 cut(s)	1583
BstV2I	GAAGAC	1 cut(s)	2972
BstX2I	RGATCY	9 cut(s)	515, 598, 1370, 2138, 2221, 2506, 3091, 3299, 3644
BstXI	CCANNNNNNTGG	1 cut(s)	3630
BstYI	RGATCY	9 cut(s)	515, 598, 1370, 2138, 2221, 2506, 3091, 3299, 3644
BsuRI	GGCC	8 cut(s)	56, 1206, 1473, 2288, 2775, 3209, 3634, 3682
BtgI	CCRYGG	2 cut(s)	869, 1497
BtrI	CACGTC	2 cut(s)	2647, 3264
BtsI	GCAGTG	3 cut(s)	69, 249, 1734
BveI	ACCTGC	2 cut(s)	1702, 2042
Cac8I	GCNNGC	2 cut(s)	696, 2662
CaiI	CAGNNNCTG	5 cut(s)	506, 559, 1256, 3725, 3920
CciI	TCATGA	3 cut(s)	1476, 2194, 3384
CfoI	GCGC	3 cut(s)	1264, 1591, 4334
Cfr10I	RCCGGY	1 cut(s)	3901
Cfr13I	GGNCC	5 cut(s)	54, 861, 1204, 3207, 4361
CseI	GACGC	1 cut(s)	1095
CspAI	ACCGGT	1 cut(s)	3901
CspCI	CAANNNNNGTGG	6 cut(s)	1143, 1178, 2239, 2274, 3334, 3369
DraI	TTTAAA	1 cut(s)	3546
EaeI	YGGCCR	2 cut(s)	2286, 3632
Eam1104I	CTCTTC	3 cut(s)	584, 3225, 3421
EarI	CTCTTC	3 cut(s)	584, 3225, 3421
Eco105I	TACGTA	1 cut(s)	1583
Eco130I	CCWWGG	4 cut(s)	869, 898, 1497, 1675
Eco147I	AGGCCT	2 cut(s)	2775, 3682
Eco31I	GGTCTC	1 cut(s)	4031
Eco32I	GATATC	1 cut(s)	1951
Eco47I	GGWCC	2 cut(s)	861, 4361
Eco57I	CTGAAG	2 cut(s)	867, 2838
EcoO109I	RGGNCCY	1 cut(s)	4361
EcoRI	GAATTC	5 cut(s)	334, 413, 567, 4196, 4260
EcoRII	CCWGG	8 cut(s)	607, 664, 1536, 1861, 2212, 2890, 3682, 4389
EcoRV	GATATC	1 cut(s)	1951
EcoT14I	CCWWGG	4 cut(s)	869, 898, 1497, 1675
EcoT22I	ATGCAT	2 cut(s)	2767, 3790
ErhI	CCWWGG	4 cut(s)	869, 898, 1497, 1675
Esp3I	CGTCTC	1 cut(s)	1113
FalI	AAGNNNNNCTT	2 cut(s)	959, 991
FaqI	GGGAC	3 cut(s)	2083, 3250, 3603
FauI	CCCGC	1 cut(s)	3552
FbaI	TGATCA	2 cut(s)	165, 2967
FblI	GTMKAC	2 cut(s)	1247, 3466
GlaI	GCGC	3 cut(s)	1263, 1590, 4333
GsaI	CCCAGC	3 cut(s)	230, 1637, 2556
GsuI	CTGGAG	3 cut(s)	1250, 2010, 3579
HaeIII	GGCC	8 cut(s)	56, 1206, 1473, 2288, 2775, 3209, 3634, 3682
HapII	CCGG	2 cut(s)	187, 3902
HgaI	GACGC	1 cut(s)	1095
HhaI	GCGC	3 cut(s)	1264, 1591, 4334
Hin6I	GCGC	3 cut(s)	1262, 1589, 4332
HinP1I	GCGC	3 cut(s)	1262, 1589, 4332
HincII	GTYRAC	1 cut(s)	32
HindII	GTYRAC	1 cut(s)	32
HindIII	AAGCTT	3 cut(s)	1004, 2537, 3737
HpaII	CCGG	2 cut(s)	187, 3902
HphI	GGTGA	7 cut(s)	286, 1046, 2249, 3110, 3406, 3891, 4064
Hpy166II	GTNNAC	5 cut(s)	32, 1248, 1668, 2641, 3467
Hpy8I	GTNNAC	5 cut(s)	32, 1248, 1668, 2641, 3467
Hpy99I	CGWCG	1 cut(s)	2648
HpyAV	CCTTC	9 cut(s)	900, 1075, 1295, 1988, 2161, 3020, 3060, 3594, 4374
HpyCH4IV	ACGT	5 cut(s)	1409, 1582, 2119, 2646, 3263
HpyF10VI	GCNNNNNNNGC	8 cut(s)	2029, 2150, 2348, 2357, 3407, 3530, 3725, 4145
HpySE526I	ACGT	5 cut(s)	1409, 1582, 2119, 2646, 3263
HspAI	GCGC	3 cut(s)	1262, 1589, 4332
Ksp22I	TGATCA	2 cut(s)	165, 2967
LguI	GCTCTTC	1 cut(s)	3421
LmnI	GCTCC	9 cut(s)	325, 371, 1104, 1269, 1309, 1540, 2029, 3162, 3598
MaeII	ACGT	5 cut(s)	1409, 1582, 2119, 2646, 3263
MbiI	CCGCTC	1 cut(s)	3559
MfeI	CAATTG	2 cut(s)	889, 1956
MflI	RGATCY	9 cut(s)	515, 598, 1370, 2138, 2221, 2506, 3091, 3299, 3644
MhlI	GDGCHC	7 cut(s)	368, 886, 1101, 2344, 3177, 3194, 3263
MlsI	TGGCCA	2 cut(s)	2288, 3634
MluNI	TGGCCA	2 cut(s)	2288, 3634
MlyI	GAGTC	4 cut(s)	641, 727, 1028, 2938
MmeI	TCCRAC	5 cut(s)	771, 2717, 3345, 3544, 4048
Mox20I	TGGCCA	2 cut(s)	2288, 3634
Mph1103I	ATGCAT	2 cut(s)	2767, 3790
MroXI	GAANNNNTTC	4 cut(s)	1815, 2823, 4165, 4185
MscI	TGGCCA	2 cut(s)	2288, 3634
MslI	CAYNNNNRTG	4 cut(s)	1082, 3000, 3628, 3957
Msp20I	TGGCCA	2 cut(s)	2288, 3634
MspA1I	CMGCKG	4 cut(s)	513, 1637, 3599, 4148
MspI	CCGG	2 cut(s)	187, 3902
MspR9I	CCNGG	9 cut(s)	187, 609, 666, 1538, 1863, 2214, 2892, 3684, 4391
MunI	CAATTG	2 cut(s)	889, 1956
Mva1269I	GAATGC	2 cut(s)	1703, 4334
MvaI	CCWGG	8 cut(s)	609, 666, 1538, 1863, 2214, 2892, 3684, 4391
MwoI	GCNNNNNNNGC	8 cut(s)	2029, 2150, 2348, 2357, 3407, 3530, 3725, 4145
NciI	CCSGG	1 cut(s)	187
NcoI	CCATGG	2 cut(s)	869, 1497
NlaIV	GGNNCC	5 cut(s)	1372, 2497, 3594, 3646, 4300
NmuCI	GTSAC	5 cut(s)	490, 496, 633, 1642, 2419
NsiI	ATGCAT	2 cut(s)	2767, 3790
NspI	RCATGY	6 cut(s)	698, 1136, 2573, 2765, 3020, 3136
OliI	CACNNNNGTG	1 cut(s)	3628
PaeI	GCATGC	1 cut(s)	698
PagI	TCATGA	3 cut(s)	1476, 2194, 3384
PaqCI	CACCTGC	2 cut(s)	1702, 2042
PceI	AGGCCT	2 cut(s)	2775, 3682
PciI	ACATGT	2 cut(s)	2569, 3132
PciSI	GCTCTTC	1 cut(s)	3421
PcsI	WCGNNNNNNNCGW	2 cut(s)	415, 2989
PctI	GAATGC	2 cut(s)	1703, 4334
PdmI	GAANNNNTTC	4 cut(s)	1815, 2823, 4165, 4185
PfeI	GAWTC	7 cut(s)	481, 851, 1281, 1907, 2895, 3287, 4166
PflMI	CCANNNNNTGG	1 cut(s)	870
PfoI	TCCNGGA	1 cut(s)	1536
PinAI	ACCGGT	1 cut(s)	3901
PleI	GAGTC	4 cut(s)	640, 727, 1027, 2938
PpsI	GAGTC	4 cut(s)	640, 727, 1027, 2938
Ppu21I	YACGTR	2 cut(s)	1583, 2120
PpuMI	RGGWCCY	1 cut(s)	4361
PscI	ACATGT	2 cut(s)	2569, 3132
PshAI	GACNNNNGTC	1 cut(s)	1297
Psp1406I	AACGTT	1 cut(s)	1409
Psp5II	RGGWCCY	1 cut(s)	4361
Psp6I	CCWGG	8 cut(s)	607, 664, 1536, 1861, 2212, 2890, 3682, 4389
PspFI	CCCAGC	3 cut(s)	226, 1633, 2552
PspGI	CCWGG	8 cut(s)	607, 664, 1536, 1861, 2212, 2890, 3682, 4389
PspN4I	GGNNCC	5 cut(s)	1372, 2497, 3594, 3646, 4300
PspPI	GGNCC	5 cut(s)	54, 861, 1204, 3207, 4361
PspPPI	RGGWCCY	1 cut(s)	4361
PsrI	GAACNNNNNNTAC	2 cut(s)	1314, 1346
PstI	CTGCAG	1 cut(s)	4147
PstNI	CAGNNNCTG	5 cut(s)	506, 559, 1256, 3725, 3920
PsuI	RGATCY	9 cut(s)	515, 598, 1370, 2138, 2221, 2506, 3091, 3299, 3644
PvuII	CAGCTG	3 cut(s)	1637, 3599, 4148
RseI	CAYNNNNRTG	4 cut(s)	1082, 3000, 3628, 3957
SapI	GCTCTTC	1 cut(s)	3421
Sau96I	GGNCC	5 cut(s)	54, 861, 1204, 3207, 4361
ScaI	AGTACT	3 cut(s)	541, 3699, 4379
SchI	GAGTC	4 cut(s)	641, 727, 1028, 2938
ScrFI	CCNGG	9 cut(s)	187, 609, 666, 1538, 1863, 2214, 2892, 3684, 4391
SduI	GDGCHC	7 cut(s)	368, 886, 1101, 2344, 3177, 3194, 3263
SfcI	CTRYAG	2 cut(s)	1248, 4143
SinI	GGWCC	2 cut(s)	861, 4361
SmiMI	CAYNNNNRTG	4 cut(s)	1082, 3000, 3628, 3957
SmlI	CTYRAG	1 cut(s)	2445
SmoI	CTYRAG	1 cut(s)	2445
SnaBI	TACGTA	1 cut(s)	1583
SpeI	ACTAGT	1 cut(s)	3694
SphI	GCATGC	1 cut(s)	698
SseBI	AGGCCT	2 cut(s)	2775, 3682
SsiI	CCGC	3 cut(s)	513, 1426, 3559
SspI	AATATT	1 cut(s)	2254
StuI	AGGCCT	2 cut(s)	2775, 3682
StyD4I	CCNGG	9 cut(s)	185, 607, 664, 1536, 1861, 2212, 2890, 3682, 4389
StyI	CCWWGG	4 cut(s)	869, 898, 1497, 1675
TaiI	ACGT	5 cut(s)	1412, 1585, 2122, 2649, 3266
TaqI	TCGA	6 cut(s)	154, 341, 2218, 2827, 4248, 4258
TaqII	GACCGA	1 cut(s)	824
TatI	WGTACW	6 cut(s)	539, 2695, 3442, 3697, 4355, 4377
TfiI	GAWTC	7 cut(s)	481, 851, 1281, 1907, 2895, 3287, 4166
TseFI	GTSAC	5 cut(s)	490, 496, 633, 1642, 2419
Tsp45I	GTSAC	5 cut(s)	490, 496, 633, 1642, 2419
TspGWI	ACGGA	6 cut(s)	1166, 1305, 2243, 3662, 3720, 4123
Van91I	CCANNNNNTGG	1 cut(s)	870
VpaK11BI	GGWCC	2 cut(s)	861, 4361
XbaI	TCTAGA	2 cut(s)	2344, 3979
XceI	RCATGY	6 cut(s)	698, 1136, 2573, 2765, 3020, 3136
XcmI	CCANNNNNNNNNTGG	2 cut(s)	560, 1349
XmiI	GTMKAC	2 cut(s)	1247, 3466
XmnI	GAANNNNTTC	4 cut(s)	1815, 2823, 4165, 4185
ZrmI	AGTACT	3 cut(s)	541, 3699, 4379
Zsp2I	ATGCAT	2 cut(s)	2767, 3790

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.