Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0001783

Physical Location & Seq

Genomic Coordinates Forward (+)

12031576 .. 12041227

Gene Structure 9652 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000032202

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4857 bp

ATGGGTTTTAAGCCAATAGACTGGTATTGTCAACCAGAAGCTAATGGGGTATGGGCCAAAGCAGTGAGTGCTTTTGGCTCATACACTCCTTGTGCAATGGACACTATGGTCATCTGCGTTTCTCATTTAGTTCTTTTCAGCCTGTGCTGCTATCGAATATGGATGATCAAGAAGAATTCGAAAGCCCGGAGGTTCAGGTTGAGGTCAAATTACTATAACTACTTGTTGAGTTTGTTGGCTGGTTACTCCACTGCTGAGCCTCTACTGAGGTTGGTGATGGGTTTATCACTTTTTAACCCGTTTGGAAAAACTGGCTTTGCTCCTTTTGAGATGACTTCTTCAATCATTGAAGCTCTTTCTTGGTTCTCTATGCTAATTTTAATTGGCTTGGAAACTAAGATTTACATTCGGGAATTCCGATGGTACGTAAGGTTTGGAGTCCTTTATGTCTTGGTAGGAGATGCTGTGCTGCTAAATCTTATTCTTGGAGTGACAGATTCCTACAGTGGATGTGCTTTATATCTGTATATAAGCACTGTCTGTTGCCAGGTTTTGTTCGGAATTCTTCTTCTCTTTTATGTTCCCCATCTGGATCCTTATCCTGGCTACATTTTTCTGCAATCTGAGTCACTTGACAATGCTGAATATGAAGCACTACCAGAAGAAGATCAAATTTGCCCTGAACGGCATGTTAATATATTCTCCAGAATATATTTTGGATGGATGACTCCACTTATGCAGCTGGGGTACAGAAAACCCATCACTGAAACAGATGTTTGGAAGTTGGACACATGGGATCAGACAGAGACATTGATTAGAAGGTTTCAGGAATGTTGGGTTGAAGAATCTCAGAGGTCCAAGCCATGGCTTCTCAGAGCACTGCATCGTAGCCTTGGACGGAGGTTCTGGTTGGGAGGCTTTTTCAAGATTTGCCATGATCTCTCTCAGTTTTTGGGTCCCATTCTATTAAATCATCTTTTGCAGTCAATGCAACGAGGTGAACCAGCTTGGATTGGTTATATATATGCCTTCTTAATTTTCATTGGTGTGTCATTTGGTGTGCTCCCTGAATCTCAGTTTTACCAGAATATTATGCGGGTCGGCTTTCGGTTGAGATCAACTTTGGTTGCTGCTATATTCCGTAAATCTATAAGAATAACACATGAGGGCCATAAGAAGTTCCCAATTGGGAAGATAACAAATATGATGTCTACAGATGCTAATGCACTCCAGAAAACATGCGAACAACTTCACGGACTATGGTCTGCTCCTTTTCATATCATTGTAGCTATGGTTCTTCTTTATCAACAATTAGGTATTGCATCGCTTATTGGATCATTGATGCTAGTTCTTACGATCCCCATACAGACAACGCTGATCAGCAAAATGCGGAAACTGACAAAGGATGGACTGCAACAGACTGACAAGAGGGTTGGCCTCATGAATGAAATTTTAGCTGCCATGGATACGGTGAAATGTTATGCCTGGGAGACAAGTTTCCAGCAGCAAGTTCAAAGTATAAGGAATGATGAACTTTCAAGGTTATGTAGAGCGCAGTTACTATCTGCTTTGAACAGTTTTATTCTCAAAAGCATCCCAGTTGTTGTGACAGTAACTTCATTTGGAGCATTCACTTTTCTTGGAGGCGAACTGACACCTGCAAGGGCATTTACATCACTTTCTCTTTTTGCAGTGCTACGCTTCCCTGTAAACATGCTACCCAACTTATTAAGTCAGGTTGTAAATGCGAATGTATCCTTACAGCGTTTGGAAGAACTATTTTTAACTGAGGAGAGAATTCTAGTACCCAACCCGCCACTGGAACCAGGGCTTCCAGCCATCTCAATTCAGGATGGATACTTTTCATGGGATTCAAAGGCAGAGAAGCCCACATTATCAAACATCAACTTAGATGTACCAGTTGGCAGCTTAGTTGCAGTTGTTGGCGGCACTGGAGAAGGAAAGACATCACTTATATCAGCCATGCTTGGGGAGTTGCCTCCCATTGCAGATGCAGGTGTTGTAATTAGGGGGACTGTTGCTTATGTTCCCCAAGTTTCATGGATTTTCAATGCTACTATACGTGAAAACATTTTATTTGGATCTGAATTTGAAGCTGCACGGTATTGGAAGGCTATTGATGTAACTGAGTTCCATCATGACCTAGACTTACTTCCAGGTCGAGATCTAACAGAGATTGGTGAAAGAGGGGTCAATATTAGTGGAGGTCAAAAGCAAAGGGTTTCAATGGCCAGAGCTGTATATTCTAATTCAGATGTTTACATATTTGACGATGCATTAAGTGCTTTAGATGCTCATGTTGCTAGACAGGTTTTCAATCGCTGTATCAAGGAAGAGTTGCAGGGGAAAACTAGGGTGCTTGTCACAAATCAACTACATTTTCTGCCTCAAGTGGATGAAGTTATTTTAGTCTCTGACGGTACGATTAAAGAGAAGGGAACCTTCAAGGATCTCTCTGAAAACAGTTTGCTGTTCCAGAAGCTCATGGAAAATGCCGGAAAAATGGAAGAACATGTAGAAGAGAAGGAAGACAGCAAAACTGAGTACCAGAAAAGCTCAGTTCCTGTATCTAATGGGGTGGTGAATGACTTGCCAAAAGATGCAAGCTACACCAAGAAAGGGAAAGGGATGAGATCTGTACTCATTAAACAAGAGGAACGGGAAACAGGTGTTGTAAGTTGGAAAATTTTGCAGAGGTACAACCTTGCATTAGGAGGGCTATGGGTGGTTATGGTTCTATTTACTTGTTATACACTAACAGAAGTTCTTCGAGTTTCAAGCAGTACATGGTTAAGTTTTTGGACAGATCAAAGCATGTCAAAGAGTTATACACCTGGATTCTACTTGCTTATATATGCGATCCTCTCAATTGCTCAGGTAACAGTGACTCTGACGAACTCTTTTTGGCTAATCACTTCAAGTCTTCATGCAGCCCGAAATTTGCATGATTCCCTGCTACATGCTATACTAAAAGCTCCAATGGTGTTCTTTCACACTAACCCAACTGGAAGGATGATCAATAGGTTTGCAAAGGATCTGGATGATATAGATCGCAATGTAGCCAATTTTATGAACTCATTTCTGGGTCAAGTGTGGCAGCTTCTTTCGAGTTTTGTGCTCATAGGCATTGTGAGCACAATATCCCTCTGGGCCATAATGCCACTTCTAATTTTGTTCTATGCAGCCTATCTATTCTATCAGAGCACATCCCGTGAATTGAAACGCTTGGATTCCATTACCAGATCTCCTATTTATGCACAGTTTGGAGAAGCATTAAATGGATTGTCATCAATTCGTGCCTATCATGCTTATGATCGGATGGCAAACATTAGTGGAAGGTCTATGGATAATAATATCAGATTCACTCTTGTGATTGGTGGTTCAAACCGCTGGCTTGCTATAAGGTTGGAAACACTAGGAGGTATAATGATTTGGGTGATAGCAACCTTTTCTGTCATGCAGAATGTAAGAGCAGAAAACCAAGTACAATTTGCATCCTCAATGGGTCTACTTCTCACTTATACTTTGAATATCACAAGTCTGTTGAGTGATGTTCTTAGACAAGCAAGCAGGGCTGAAAATAGTTTAAATGCTGTTGAGCGGGTTGGGACATATATAGATTTGCCTTCTGAGGCTCCAGCTGTTATTGAAAGCAACCGTCCCCCACATGGGTGGCCATCATCAGGATCAATCGAGTTTGAGGATGTTGCCCTCCGTTATAGGCCTGGACTTCCACCAGTACTGCACGGATTATCGTTTACAATTTCTGCAAGTGAGAAGCTAGGAATAGTTGGAAGAACTGGTGCTGGCAAATCTAGCATGATTAATGCATTGTTTAGGATGGTAGAACTAGAAAAAGGAAGCATCTTGATTGATGGTTATGATGTTTCTAAGTTTGGACTGGAAGATTTACGAAAAGTTCTTAGCATCATACCCCAATCACCGGTTCTGTTTTCTGGTACTGTGCGGTTTAATCTAGATCCTTTCCGTGAGCATAATGATGCTGATCTTTGGGAAGCCCTAGAAAGGGCACATCTAAAGGATGTAATTAGGAGGAATTCCTTTGGTCTCGATGCTGAGGTTTTCGAGAGCGGTGAGAATTTCAGTGTTGGACAGAGGCAGCTAGTAAGTCTTGCTAGAGCTTTGCTACGGAGATCAAAGATTCTTGTTCTTGATGAAGCAACTGCAGCTGTGGATGTCAGAACTGATGCTCTCATCCAAAAGACCATACGTGAAGAATTCAAGTCATGCACCATGCTTGTTATTGCTCACAGATTGAACACCATTATCGACTGTGATCGAATTCTTGTTCTTGATGCTGGTCAGGTCCTAGAACATTGTTCCCCAGAAGAACTGCTGCTCAATGAAGAGAGCGCATTCTCCAAGATGGTCAGGAGTACCGGACCTTCTAATGCTCAGTACTTACGCAGCCTGGTATTTGAAGGCAAGCAGAATAAGGAGAATAGAGACGAAGCCGAGCAACTGTTTGACCAGAGCCAGAGGAGATGGTTAGCCTCTTCGCGCTGGGCCGCTGCTGCTCAATTTGCCTTGGCTGTTAGTCTCACATCCTCACAGAATGATCTCCAAAGGTTAGATATTGAAGACGAGGACAATATCCTGGTAAAAACAAAGGATGCAGTTATAACACTACAGGGAGTTTTGGAAGGAAAGCATGATAAAGATATAGAAATGTCACTAAATCAACACCATATTCCAGGAGAGGGGTGGTGGTCAGCTTTCTTCAGAATAGTTGAAGGTCTAGCCGTGATGGGCGGGCTGGCTCAGAACAGATTTCACCCTTTAGAAGATGACGATTTTGAAGACCAATATCTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031090 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

1619

Amino Acids

182.4

Weight (kDa)

6.26

Isoelectric Point (pI)

44.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	303 - 570	1.3e-37	ABC transporter transmembrane region
ABC_tran	PF00005	632 - 767	3.3e-17	ABC transporter
ABC_membrane	PF00664	918 - 1170	6e-30	ABC transporter transmembrane region
ABC_tran	PF00005	1255 - 1403	2.6e-27	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001783)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30410 AT1G30410 AT1G30410 AT1G30410 AT1G30410 AT1G30410 AT1G30420 AT1G30420
fragaria_vesca	FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_3g09710 FvH4_3g09720
malus_domestica	MD10G1255300.v1.1 MD10G1255500.v1.1
prunus_persica	Prupe.4G088600_v2.0.a1 Prupe.4G088600_v2.0.a1
pyrus_communis	pycom10g21050
rosa_chinensis	RchiOBHm_Chr3g0492011 RchiOBHm_Chr5g0015441 RchiOBHm_Chr5g0015451 RchiOBHm_Chr5g0015481 RchiOBHm_Chr5g0015491
rosa_laevigata	RLG00000032199 RLG00000032201 RLG00000032202
rosa_multiflora	Rmu_sc0019960.1_g000002
rosa_roxburghii	Rroxscaffold_1G00061020 Rroxscaffold_1G00061040 Rroxscaffold_1G00061050 Rroxscaffold_6G00392640
rosa_rugosa	Rorug03G0251100 Rorug05G0027400 Rorug05G0027500 Rorug05G0027700
rosa_samantha	Rh3AG301500 Rh5AG121000 Rh5AG121100 Rh5CG130600 Rh5DG118900 Rh5DG119000
rosa_wichuraiana	Rw5G010450 Rw5G010470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	4664
AarI	CACCTGC	2 cut(s)	1666, 2006
AasI	GACNNNNNNGTC	1 cut(s)	107
Acc36I	ACCTGC	2 cut(s)	1666, 2006
AccB7I	CCANNNNNTGG	1 cut(s)	864
AccBSI	CCGCTC	2 cut(s)	3622, 4113
AccI	GTMKAC	2 cut(s)	1211, 3529
AccII	CGCG	1 cut(s)	4543
AcoI	YGGCCR	2 cut(s)	2250, 3695
AcuI	CTGAAG	1 cut(s)	4747
AflIII	ACRYGT	1 cut(s)	2533
AgeI	ACCGGT	1 cut(s)	3964
AjuI	GAANNNNNNNTTGG	2 cut(s)	3951, 3983
AleI	CACNNNNGTG	2 cut(s)	3389, 3691
Alw21I	GWGCWC	5 cut(s)	880, 1065, 3141, 3158, 3227
Alw26I	GTCTC	6 cut(s)	800, 1484, 2437, 4094, 4482, 4586
AlwNI	CAGNNNCTG	1 cut(s)	2585
AoxI	GGCC	8 cut(s)	54, 1168, 1435, 2250, 3171, 3695, 3743, 4548
ArsI	GACNNNNNNTTYG	2 cut(s)	1193, 1225
AseI	ATTAAT	1 cut(s)	3846
AsiGI	ACCGGT	1 cut(s)	3964
Asp700I	GAANNNNTTC	2 cut(s)	1248, 2787
AspLEI	GCGC	3 cut(s)	1555, 4397, 4545
AspS9I	GGNCC	8 cut(s)	54, 855, 956, 1168, 3171, 4348, 4424, 4548
AsuC2I	CCSGG	1 cut(s)	187
AsuHPI	GGTGA	9 cut(s)	286, 1010, 1483, 2213, 2614, 3469, 3954, 4127, 4808
AsuII	TTCGAA	1 cut(s)	179
AvaII	GGWCC	4 cut(s)	855, 956, 4348, 4424
BaeGI	GKGCMC	1 cut(s)	4054
BalI	TGGCCA	2 cut(s)	2252, 3697
BamHI	GGATCC	1 cut(s)	592
BarI	GAAGNNNNNNTAC	2 cut(s)	4411, 4443
BbsI	GAAGAC	4 cut(s)	2556, 2936, 4629, 4848
Bbv12I	GWGCWC	5 cut(s)	880, 1065, 3141, 3158, 3227
BbvCI	CCTCAGC	1 cut(s)	4098
BceAI	ACGGC	2 cut(s)	701, 4769
BcgI	CGANNNNNNTGC	2 cut(s)	3118, 3152
BciVI	GTATCC	3 cut(s)	1459, 1765, 1850
BclI	TGATCA	3 cut(s)	165, 1377, 3036
BcnI	CCSGG	1 cut(s)	187
BcoDI	GTCTC	6 cut(s)	800, 1484, 2437, 4094, 4482, 4586
BfmI	CTRYAG	5 cut(s)	502, 1212, 4206, 4670, 4853
BfuAI	ACCTGC	2 cut(s)	1666, 2006
BfuI	GTATCC	3 cut(s)	1459, 1765, 1850
BglII	AGATCT	3 cut(s)	2185, 2654, 3263
BlpI	GCTNAGC	1 cut(s)	255
BmcAI	AGTACT	2 cut(s)	3762, 4442
Bme18I	GGWCC	4 cut(s)	855, 956, 4348, 4424
BmgT120I	GGNCC	8 cut(s)	54, 855, 956, 1168, 3171, 4348, 4424, 4548
BmiI	GGNNCC	6 cut(s)	594, 957, 958, 1824, 2461, 3657
BmrI	ACTGGG	1 cut(s)	1592
BmuI	ACTGGG	1 cut(s)	1592
BoxI	GACNNNNGTC	1 cut(s)	1261
BpiI	GAAGAC	4 cut(s)	2556, 2936, 4629, 4848
BpmI	CTGGAG	4 cut(s)	688, 1214, 1974, 3642
Bpu10I	CCTNAGC	2 cut(s)	2895, 4098
Bpu1102I	GCTNAGC	1 cut(s)	255
Bpu14I	TTCGAA	1 cut(s)	179
BpuEI	CTTGAG	1 cut(s)	2394
BpuMI	CCSGG	1 cut(s)	187
BsaAI	YACGTR	3 cut(s)	427, 2084, 4253
BsaBI	GATNNNNATC	4 cut(s)	597, 3069, 3307, 4026
BsaI	GGTCTC	1 cut(s)	4094
BsaJI	CCNNGG	6 cut(s)	863, 892, 1461, 1485, 1826, 4569
BsaWI	WCCGGW	2 cut(s)	3964, 4421
BsaXI	ACNNNNNCTCC	4 cut(s)	450, 480, 3250, 3280
Bse118I	RCCGGY	1 cut(s)	3964
Bse3DI	GCAATG	3 cut(s)	102, 2004, 3082
Bse8I	GATNNNNATC	4 cut(s)	597, 3069, 3307, 4026
BseDI	CCNNGG	6 cut(s)	863, 892, 1461, 1485, 1826, 4569
BseJI	GATNNNNATC	4 cut(s)	597, 3069, 3307, 4026
BseMI	GCAATG	3 cut(s)	102, 2004, 3082
BseRI	GAGGAG	2 cut(s)	1805, 4537
BseSI	GKGCMC	1 cut(s)	4054
BseYI	CCCAGC	2 cut(s)	742, 4545
BsgI	GTGCAG	2 cut(s)	2103, 3749
Bsh1236I	CGCG	1 cut(s)	4543
BshFI	GGCC	8 cut(s)	56, 1170, 1437, 2252, 3173, 3697, 3745, 4550
BshTI	ACCGGT	1 cut(s)	3964
BsiHKAI	GWGCWC	5 cut(s)	880, 1065, 3141, 3158, 3227
BsiSI	CCGG	4 cut(s)	187, 2517, 3965, 4422
BslFI	GGGAC	4 cut(s)	942, 2047, 3643, 3666
BsmAI	GTCTC	6 cut(s)	800, 1484, 2437, 4094, 4482, 4586
BsmBI	CGTCTC	1 cut(s)	4482
BsmFI	GGGAC	4 cut(s)	942, 2047, 3643, 3666
BsmI	GAATGC	2 cut(s)	1628, 4397
BsnI	GGCC	8 cut(s)	56, 1170, 1437, 2252, 3173, 3697, 3745, 4550
Bso31I	GGTCTC	1 cut(s)	4094
Bsp119I	TTCGAA	1 cut(s)	179
Bsp1286I	GDGCHC	6 cut(s)	880, 1065, 3141, 3158, 3227, 4054
Bsp1720I	GCTNAGC	1 cut(s)	255
Bsp19I	CCATGG	2 cut(s)	863, 1461
BspANI	GGCC	8 cut(s)	56, 1170, 1437, 2252, 3173, 3697, 3745, 4550
BspFNI	CGCG	1 cut(s)	4543
BspHI	TCATGA	2 cut(s)	1440, 2158
BspLI	GGNNCC	6 cut(s)	594, 957, 958, 1824, 2461, 3657
BspMAI	CTGCAG	1 cut(s)	4210
BspMI	ACCTGC	2 cut(s)	1666, 2006
BspT104I	TTCGAA	1 cut(s)	179
BspTNI	GGTCTC	1 cut(s)	4094
BsrBI	CCGCTC	2 cut(s)	3622, 4113
BsrDI	GCAATG	3 cut(s)	102, 2004, 3082
BsrFI	RCCGGY	1 cut(s)	3964
BssAI	RCCGGY	1 cut(s)	3964
BssECI	CCNNGG	6 cut(s)	863, 892, 1461, 1485, 1826, 4569
BssT1I	CCWWGG	4 cut(s)	863, 892, 1461, 4569
Bst6I	CTCTTC	4 cut(s)	2349, 2535, 4383, 4543
BstAPI	GCANNNNNTGC	3 cut(s)	68, 988, 2303
BstBAI	YACGTR	3 cut(s)	427, 2084, 4253
BstBI	TTCGAA	1 cut(s)	179
BstC8I	GCNNGC	8 cut(s)	2626, 3413, 3417, 3589, 3829, 4469, 4796, 4800
BstDSI	CCRYGG	2 cut(s)	863, 1461
BstFNI	CGCG	1 cut(s)	4543
BstHHI	GCGC	3 cut(s)	1555, 4397, 4545
BstMAI	GTCTC	6 cut(s)	800, 1484, 2437, 4094, 4482, 4586
BstNSI	RCATGY	6 cut(s)	692, 1242, 1717, 2537, 2839, 2984
BstPAI	GACNNNNGTC	1 cut(s)	1261
BstSFI	CTRYAG	5 cut(s)	502, 1212, 4206, 4670, 4853
BstSLI	GKGCMC	1 cut(s)	4054
BstSNI	TACGTA	1 cut(s)	427
BstUI	CGCG	1 cut(s)	4543
BstV2I	GAAGAC	4 cut(s)	2556, 2936, 4629, 4848
BstX2I	RGATCY	8 cut(s)	592, 2102, 2185, 2470, 2654, 3055, 3263, 4000
BstXI	CCANNNNNNTGG	2 cut(s)	21, 3693
BstYI	RGATCY	8 cut(s)	592, 2102, 2185, 2470, 2654, 3055, 3263, 4000
BsuI	GTATCC	3 cut(s)	1459, 1765, 1850
BsuRI	GGCC	8 cut(s)	56, 1170, 1437, 2252, 3173, 3697, 3745, 4550
BtgI	CCRYGG	2 cut(s)	863, 1461
BtgZI	GCGATG	1 cut(s)	1308
BtsI	GCAGTG	4 cut(s)	69, 249, 878, 1698
BveI	ACCTGC	2 cut(s)	1666, 2006
Cac8I	GCNNGC	8 cut(s)	2626, 3413, 3417, 3589, 3829, 4469, 4796, 4800
CaiI	CAGNNNCTG	1 cut(s)	2585
CciI	TCATGA	2 cut(s)	1440, 2158
CfoI	GCGC	3 cut(s)	1555, 4397, 4545
Cfr10I	RCCGGY	1 cut(s)	3964
Cfr13I	GGNCC	8 cut(s)	54, 855, 956, 1168, 3171, 4348, 4424, 4548
CspAI	ACCGGT	1 cut(s)	3964
CspCI	CAANNNNNGTGG	2 cut(s)	2203, 2238
DraI	TTTAAA	1 cut(s)	3609
DrdI	GACNNNNNNGTC	1 cut(s)	107
DseDI	GACNNNNNNGTC	1 cut(s)	107
EaeI	YGGCCR	2 cut(s)	2250, 3695
Eam1104I	CTCTTC	4 cut(s)	2349, 2535, 4383, 4543
EarI	CTCTTC	4 cut(s)	2349, 2535, 4383, 4543
Eco105I	TACGTA	1 cut(s)	427
Eco130I	CCWWGG	4 cut(s)	863, 892, 1461, 4569
Eco147I	AGGCCT	1 cut(s)	3745
Eco31I	GGTCTC	1 cut(s)	4094
Eco47I	GGWCC	4 cut(s)	855, 956, 4348, 4424
Eco57I	CTGAAG	1 cut(s)	4747
EcoO109I	RGGNCCY	2 cut(s)	956, 4348
EcoRI	GAATTC	7 cut(s)	175, 413, 561, 1797, 4078, 4259, 4323
EcoT14I	CCWWGG	4 cut(s)	863, 892, 1461, 4569
EcoT22I	ATGCAT	2 cut(s)	2299, 3853
ErhI	CCWWGG	4 cut(s)	863, 892, 1461, 4569
Esp3I	CGTCTC	1 cut(s)	4482
FalI	AAGNNNNNCTT	2 cut(s)	2447, 2479
FaqI	GGGAC	4 cut(s)	942, 2047, 3643, 3666
FauI	CCCGC	4 cut(s)	1089, 1821, 3615, 4787
FbaI	TGATCA	3 cut(s)	165, 1377, 3036
FblI	GTMKAC	2 cut(s)	1211, 3529
GlaI	GCGC	3 cut(s)	1554, 4396, 4544
GsaI	CCCAGC	2 cut(s)	746, 4549
GsuI	CTGGAG	4 cut(s)	688, 1214, 1974, 3642
HaeIII	GGCC	8 cut(s)	56, 1170, 1437, 2252, 3173, 3697, 3745, 4550
HapII	CCGG	4 cut(s)	187, 2517, 3965, 4422
HhaI	GCGC	3 cut(s)	1555, 4397, 4545
Hin6I	GCGC	3 cut(s)	1553, 4395, 4543
HinP1I	GCGC	3 cut(s)	1553, 4395, 4543
HincII	GTYRAC	1 cut(s)	32
HindII	GTYRAC	1 cut(s)	32
HpaII	CCGG	4 cut(s)	187, 2517, 3965, 4422
HphI	GGTGA	9 cut(s)	286, 1010, 1483, 2213, 2614, 3469, 3954, 4127, 4808
Hpy166II	GTNNAC	7 cut(s)	32, 1001, 1212, 1711, 2281, 3530, 3780
Hpy8I	GTNNAC	7 cut(s)	32, 1001, 1212, 1711, 2281, 3530, 3780
HpyCH4IV	ACGT	3 cut(s)	426, 2083, 4252
HpySE526I	ACGT	3 cut(s)	426, 2083, 4252
HspAI	GCGC	3 cut(s)	1553, 4395, 4543
KflI	GGGWCCC	1 cut(s)	956
Ksp22I	TGATCA	3 cut(s)	165, 1377, 3036
LmnI	GCTCC	6 cut(s)	325, 1068, 1273, 1625, 3001, 3661
MaeII	ACGT	3 cut(s)	426, 2083, 4252
MbiI	CCGCTC	2 cut(s)	3622, 4113
MfeI	CAATTG	2 cut(s)	1185, 2889
MflI	RGATCY	8 cut(s)	592, 2102, 2185, 2470, 2654, 3055, 3263, 4000
MhlI	GDGCHC	6 cut(s)	880, 1065, 3141, 3158, 3227, 4054
MlsI	TGGCCA	2 cut(s)	2252, 3697
MluNI	TGGCCA	2 cut(s)	2252, 3697
MlyI	GAGTC	4 cut(s)	447, 635, 721, 2902
MmeI	TCCRAC	5 cut(s)	765, 2681, 3408, 3793, 4111
Mox20I	TGGCCA	2 cut(s)	2252, 3697
Mph1103I	ATGCAT	2 cut(s)	2299, 3853
MroXI	GAANNNNTTC	2 cut(s)	1248, 2787
MscI	TGGCCA	2 cut(s)	2252, 3697
MslI	CAYNNNNRTG	5 cut(s)	1046, 3330, 3389, 3691, 4020
Msp20I	TGGCCA	2 cut(s)	2252, 3697
MspA1I	CMGCKG	5 cut(s)	742, 3411, 3662, 4211, 4553
MspI	CCGG	4 cut(s)	187, 2517, 3965, 4422
MunI	CAATTG	2 cut(s)	1185, 2889
Mva1269I	GAATGC	2 cut(s)	1628, 4397
MvnI	CGCG	1 cut(s)	4543
NciI	CCSGG	1 cut(s)	187
NcoI	CCATGG	2 cut(s)	863, 1461
NlaIV	GGNNCC	6 cut(s)	594, 957, 958, 1824, 2461, 3657
NmeAIII	GCCGAG	1 cut(s)	4522
NmuCI	GTSAC	6 cut(s)	490, 627, 1606, 2383, 2905, 4713
NsiI	ATGCAT	2 cut(s)	2299, 3853
NspI	RCATGY	6 cut(s)	692, 1242, 1717, 2537, 2839, 2984
NspV	TTCGAA	1 cut(s)	179
OliI	CACNNNNGTG	2 cut(s)	3389, 3691
PagI	TCATGA	2 cut(s)	1440, 2158
PaqCI	CACCTGC	2 cut(s)	1666, 2006
PceI	AGGCCT	1 cut(s)	3745
PciI	ACATGT	1 cut(s)	2533
PcsI	WCGNNNNNNNCGW	1 cut(s)	415
PctI	GAATGC	2 cut(s)	1628, 4397
PdmI	GAANNNNTTC	2 cut(s)	1248, 2787
PfeI	GAWTC	9 cut(s)	497, 845, 1070, 1871, 2859, 2969, 3251, 3381, 4183
PflMI	CCANNNNNTGG	1 cut(s)	864
PfoI	TCCNGGA	1 cut(s)	4735
PinAI	ACCGGT	1 cut(s)	3964
PleI	GAGTC	4 cut(s)	446, 634, 721, 2902
PpsI	GAGTC	4 cut(s)	446, 634, 721, 2902
Ppu21I	YACGTR	3 cut(s)	427, 2084, 4253
PpuMI	RGGWCCY	2 cut(s)	956, 4348
PscI	ACATGT	1 cut(s)	2533
PshAI	GACNNNNGTC	1 cut(s)	1261
PshBI	ATTAAT	1 cut(s)	3846
PsiI	TTATAA	1 cut(s)	4664
Psp5II	RGGWCCY	2 cut(s)	956, 4348
PspFI	CCCAGC	2 cut(s)	742, 4545
PspN4I	GGNNCC	6 cut(s)	594, 957, 958, 1824, 2461, 3657
PspPI	GGNCC	8 cut(s)	54, 855, 956, 1168, 3171, 4348, 4424, 4548
PspPPI	RGGWCCY	2 cut(s)	956, 4348
PsrI	GAACNNNNNNTAC	2 cut(s)	1278, 1310
PstI	CTGCAG	1 cut(s)	4210
PstNI	CAGNNNCTG	1 cut(s)	2585
PsuI	RGATCY	8 cut(s)	592, 2102, 2185, 2470, 2654, 3055, 3263, 4000
PvuII	CAGCTG	3 cut(s)	742, 3662, 4211
RseI	CAYNNNNRTG	5 cut(s)	1046, 3330, 3389, 3691, 4020
Sau96I	GGNCC	8 cut(s)	54, 855, 956, 1168, 3171, 4348, 4424, 4548
ScaI	AGTACT	2 cut(s)	3762, 4442
SchI	GAGTC	4 cut(s)	447, 635, 721, 2902
SduI	GDGCHC	6 cut(s)	880, 1065, 3141, 3158, 3227, 4054
SfcI	CTRYAG	5 cut(s)	502, 1212, 4206, 4670, 4853
SfuI	TTCGAA	1 cut(s)	179
SinI	GGWCC	4 cut(s)	855, 956, 4348, 4424
SmiMI	CAYNNNNRTG	5 cut(s)	1046, 3330, 3389, 3691, 4020
SmlI	CTYRAG	1 cut(s)	2409
SmoI	CTYRAG	1 cut(s)	2409
SnaBI	TACGTA	1 cut(s)	427
SseBI	AGGCCT	1 cut(s)	3745
SspI	AATATT	2 cut(s)	1090, 2218
StuI	AGGCCT	1 cut(s)	3745
StyI	CCWWGG	4 cut(s)	863, 892, 1461, 4569
TaiI	ACGT	3 cut(s)	429, 2086, 4255
TatI	WGTACW	5 cut(s)	2659, 2804, 3505, 3760, 4440
TauI	GCSGC	2 cut(s)	1950, 4553
TfiI	GAWTC	9 cut(s)	497, 845, 1070, 1871, 2859, 2969, 3251, 3381, 4183
TseFI	GTSAC	6 cut(s)	490, 627, 1606, 2383, 2905, 4713
Tsp45I	GTSAC	6 cut(s)	490, 627, 1606, 2383, 2905, 4713
TspGWI	ACGGA	7 cut(s)	913, 1130, 1269, 3725, 3783, 3998, 4186
Van91I	CCANNNNNTGG	1 cut(s)	864
VpaK11BI	GGWCC	4 cut(s)	855, 956, 4348, 4424
VspI	ATTAAT	1 cut(s)	3846
XbaI	TCTAGA	1 cut(s)	3997
XceI	RCATGY	6 cut(s)	692, 1242, 1717, 2537, 2839, 2984
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1816, 4743
XmiI	GTMKAC	2 cut(s)	1211, 3529
XmnI	GAANNNNTTC	2 cut(s)	1248, 2787
ZrmI	AGTACT	2 cut(s)	3762, 4442
Zsp2I	ATGCAT	2 cut(s)	2299, 3853

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.