Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0001783

Physical Location & Seq

Genomic Coordinates Forward (+)

11495719 .. 11506164

Gene Structure 10446 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G010470.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4761 bp

ATGGGTTTTAAGCCAATAGATTGGTACTGTCAGCCAGAAGCTTATGGGGTATGGCCTAAAGCAGTGAGTGCTTTTGGCTCATACACACCTTGTGCAATGGACTCTATGGTCATCTGCATTTCTCATTTAGTTCTTTTCAGCCTGTGCTGCTATCGTATATGGATGATCAAGAAGAATTTGAAAGCCTGGAGGTTCAGGTTGAGGTCAAATTACTATAACTGCTTGTTGGGTTTGTTGGCTGGTTACTCCACTGCTGAGCCTATACTGAGGTTGGTGATTGGTCTATCACTTTTTAACAAGTATGGCTTTGCTCCTTTCGAGATCACTTCTTTGATCATTGAAGCTCTTGCTTGGTGCTCTATGCTAATTTTGATTGGCTTGGAAACTAAGATATACATTCGGGAGTTCCGATGGTACGTAAGGTTTGGTGTCCTTTATGTCTTGGTAGGAGATGCTGTGGTGCTAAATCTTATTCTTGGAGTGACAGATTCCTACAGAGGATCTTCCCTGTATCTGTATATAAGCACTGTCTGTTGCCAGGTGTTGTTTGGAGTTCTACTTCTCTTCTATGTTCCCATTTTGGATCCTTATCCCGGCTATGTTGTTCTGCAATCTGAGTCACTTGACAATGCTGAATATGAAGCACTACCAGGAGAAGTTGAAATTTGCCCTGAACGGCATGTTAATATATTTTCCAGAATATATTTTGGATGGATGACTCCACTTATGCAGCTAGGGTACAGAAAACCCATTACTGAAACAGATGTTTGGAAGTTGGACACATGGGATCAGACTGAGACATTGATTAAAAGGTTTCAGGAATGTTGGGTTGAAGAATCTCAGAGGTCCAAGCCATGGCTTCTGAGAACACTGAATTGTAGCCTTGGCCGAAGGTTCTGGTTGGCAGGCTTTTTCAAGGTTTGCTATGATCTCTCTCAGTTTTCGGGTCCCATTCTATTAAATCATTTTCTGCAGTCAATGCAACAAGATGATCCAGCTTGGATTGGTTATATATATGCCTTCTTAATTTTCATTGGTGTGTCATTTGGTGTGCTCCCTGAAGCTCACTATTACCAGAATATTTTCCGGGCCGGCTTTCGGTTGAGATCAACTTTGGTAGCTGCTATATTCCGTAAATCTATAAGAATAACACATGAGGGCCGTAAGAAGTTCCCAACTGGGAAGATTACAAATATGATGTCTACAGATGCTAATGCACTCCAGAAAACATGCGAACAACTTCACGAACTATGGTCTGCTCCTTTTCGTATCATTGTAGCGATGGTTCTTCTTTACCTACAATTAGGTGTTGCATCGCTTATTGGATCCTTGATGCTAGTTCTCACGATCCCTATTCAGACAACCGTGATCAGCAAAATGCGGAAACTGACAAAGGATGGGCTGCAACAGACTGACAAGAGAGTTGGCCTCATGAATGAAATTTTAGCTGCCATGGACACTGTGAAATGTTATGCCTGGGAGAAAAGTTTCCGGCAGCGATTACAAATTATACGGAATGATGAGCTTTCAAGGTTCCGTAAAGCGCAATTACTAACTGCTTTTAACAGTTTTATTCTCAATAGCATCCCAGTTGTTGTGACAGTAACTTCATTTGGGGCATTCACTTTTCTTGGAGGCGAATTGACACCTGCAAGGGCATTTACATCACTTTCACTTTTTGCAGTGCTACACTTCCCTGTGAAGGTGCTGCCCAACTTATTGAGTCAGGTTGTAAATGCAAATGTATCCTTATATACACCAGGGCTTCCAGCCATCTCAATTCAGGATGAGTACTTTTCATGGGATTCAAAGGCAGAGAAGCCCACATTATCAAACATCAACTTAGATATACCAGTTGGCAGCTTAGTTGCAGTTGTTGGCGGCACCGGAGAAGGAAAGACATCTCTTATATCAGCCATGCTTGGGGAGCTGCCTTCCATTGCAGATGCAGGTGTTGTAATTAGGGGGACTGTTGCTTATGTTCCCCAAGTTTCATGGATTTTCAATGATACTGTACGTGAAAACATTTTATTTGGATCTGAATTTGAAGCTGCACGGTTTTGGAAGGCTGTTGATGTAACTAGGTTCCGTCATGACCTAGACTTACTTCCAGGTCGAGATCTAACAGAGATTGGTGAAAGAGGGGTCAATATTAGTGGAGGTCAAAAGCAAAGGGTATCAATGGCAAGAGCTGTATATTCTAATTCAGATGTTTACATATTTGACGATCCATTAAGTGCTCTAGATGCTCATGTTGCCAGACAGGTTTTCAACCGCTGTATCAAGGAAGAGTTGCAAGGGAAAACTAGGGTGTTTGTCACAAATCAGCTACATTTTCTCCCTCAAGTGGACGGAATTATTTTAGTTTGTGATGGTACGATTAAAGAGAAGGGAACCTTTAAGGATCTCTCTGAAAACAGTTTGCTGTTCCAGAAGCTAATGGAAAATGCTGGAAAAATGGAAGAACATGTAGAAGAAAAGGAAGACAGAAAAACTGCTTACCAGGAAAGATCACTTCCTGTGTCTAACAGGGTGGTGAATGACTTTCCAAAAGATGCAAGCCACACCAAGAAAGGGAAGGGGATGAGATCTGTACTCATTAAACAAGAAGAACGGGAAACAGGTGTTGTAAGTTGGAAAATTTTGCAGAGGTACAACCATGCATTAGGAGGGTTATGTGTGGTCATGGTTCTATTTACTTGTTATACACTAACAGAAGTTCTTCGAGTTTCAAGCAGCACATGGTTAAGTTTTTGGACAGATCAAAGCATGTCAAAGAGTTATACACCTGGGTTCTACATGCTTATATATGTGATTCTCTCAATCGGTCAGGTAACAGTGACTCTGACGAATTCTTTTTGGCTAATCACTTCAAGTCTTCGTGCAGCCCAAAATTTGCATGATGCCCTGCTACATGCTATACTTAAAGCTCCAATGGTGTTCTTTCACACTAATCCAACTGGAAGGATGATCAATAGGTTTGCAAAGGATCTGGATGATATAGATCACAATGTAGCCAATTTTATGAACTTGTTTCTGGGTCAAGTGTGGCAGCTGCTTTCGAGTTTTGTGCTCATAGGCATTGTGAGCACAATATCCCTCTGGGCCATAATGCCACTTCTAATTCTGTTCTATGTTGCCTATCTATTCTACCAGAGCACATCCCGTGAAGTGAAACGCTTATATTCCATTACCAGATCTCCTATTTATGCACATTTTGGAGAAGCATTAAATGGTTTATCATCAATTCGTGCCTATCAAGCTTATGGTCGGATGGCAAACACTTGTGGAAGGGATGTTGATAATAATATCAGATTCAGTCTGCTGCTTGGTGCTTCAAACTGCTGGCTTTGTATAAGGTTGGAAACACTAGGAGGCATCATGATTTGGGTGATAGCAACCTTTGCTGTCATGCAAAATGGAAGAGCAGAAAACCAAGTACAATTTGCATCTACAATGGGTCTACTTCTCACTTATACTTTTAATATCACAAGTCTGTTGAGCGATGTTCTGAGACAAGCAAGCAGGGCTGAAAATAGTTTAAATGCTGTTAAGCGGGTTGGAACATATATAGATTTGCCTTCTGAGGCTCCAGCTGTTATTGAAAGCAACCGTCCCCCACATGGGTGGCCATCATCAGGATCAATCAAGTTTGAGGATGTTGTCCTCTGTTATAGGCCTGGACTCCCACCAGTGCTGCACGGATTATCATTTACAGTTTCTGCAAGTGAGAAGCTAGGAATAGTTGGAAGAACTGGTGCTGGCAAATCTAGCATGATTAATGCATTGTTTAGAATAGCAGAAATAGAAAAAGGAAGCATCTTGATTGATAGTTGTGATGTTTCTAACATCATACCACAATCACCAGTTCTTTTCTCAGGAACTGTGCGGTTTAATCTTGATCCTTTCAGTGAGCATAATGATGCTGACCTTTGGGAAGCCCTAGAAAGGGCGCATCTAAAGGATGTCATGAGGAGGAATTCATTCTGTCTCGATGCTGAGGTTTCCGAGGGCGGTGAAAATTTCAGTGTTGGACAGAGGCAGCTAATAAGTCTTGCTAGAGCATTGCTGCGGAGATCAAAGATTCTTGTTCTTGATGAAGCAACTGCAGCTGTGGATGTTAGAACTGATGCTCTCATCCAAAAGACCATACGTGAAGAATTCGAATCATGCACCATGCTCATTATTGCTCACAGATTGAACACCATTATCGACTGTGATCGAATTCTTGTTCTTGATGCTGGTCAGGTCCTAGAACATGGTTCCCCAGAAGAACTGCTGTTAAATGAAGATAGCCCATTCTCCAAAATGGTCAGTAGTACAGGACCTTGTAATGCTCAATACTTACGCAGCCTGGTATTCGAAGGCAAGCAGAATAAGGTGAATAGAGACCAGCAACTGGTTGGCCAGAGCCGCAGGAGATGGTTAGCCTCTTCGTGCTGGGCTGCTGCTGCCCAATTTGCTTTGACCGTTAGTCTCACACCCTCACGGAGCGATCTCCAAAGGTTAGATATTGTAGACGAGGACAATATCCTCATGAAAACAAAGGATGCAGTTATAACACTACAGGGAGTTTTGGAAGGAAAGCATGATAAAAATATGGACAAATCACTAAATCAGCACCATATTCCAAGAGAGGGGTGGTGGTCAGCTTTCTTCAGAATAGTTGAAGGTCTGGCCGTGATGGGCAGGCTGTCTCAGAACAGACTTCATCCGCTAGAAGCTGAAGATTTTGAAGACAAATCTACAGGTTGGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031090 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

1586

Amino Acids

178.76

Weight (kDa)

8.16

Isoelectric Point (pI)

41.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	300 - 566	2.5e-38	ABC transporter transmembrane region
ABC_tran	PF00005	610 - 745	1.4e-17	ABC transporter
ABC_membrane	PF00664	896 - 1161	1.1e-29	ABC transporter transmembrane region
ABC_tran	PF00005	1233 - 1370	1.9e-21	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001783)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30410 AT1G30410 AT1G30410 AT1G30410 AT1G30410 AT1G30410 AT1G30420 AT1G30420
fragaria_vesca	FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_2g14981 FvH4_3g09710 FvH4_3g09720
malus_domestica	MD10G1255300.v1.1 MD10G1255500.v1.1
prunus_persica	Prupe.4G088600_v2.0.a1 Prupe.4G088600_v2.0.a1
pyrus_communis	pycom10g21050
rosa_chinensis	RchiOBHm_Chr3g0492011 RchiOBHm_Chr5g0015441 RchiOBHm_Chr5g0015451 RchiOBHm_Chr5g0015481 RchiOBHm_Chr5g0015491
rosa_laevigata	RLG00000032199 RLG00000032201 RLG00000032202
rosa_multiflora	Rmu_sc0019960.1_g000002
rosa_roxburghii	Rroxscaffold_1G00061020 Rroxscaffold_1G00061040 Rroxscaffold_1G00061050 Rroxscaffold_6G00392640
rosa_rugosa	Rorug03G0251100 Rorug05G0027400 Rorug05G0027500 Rorug05G0027700
rosa_samantha	Rh3AG301500 Rh5AG121000 Rh5AG121100 Rh5CG130600 Rh5DG118900 Rh5DG119000
rosa_wichuraiana	Rw5G010450 Rw5G010470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	4559
AarI	CACCTGC	2 cut(s)	1657, 1940
AasI	GACNNNNNNGTC	1 cut(s)	107
Acc36I	ACCTGC	2 cut(s)	1657, 1940
AccB1I	GGYRCC	1 cut(s)	1883
AccB7I	CCANNNNNTGG	2 cut(s)	855, 4399
AccI	GTMKAC	3 cut(s)	1202, 3463, 4518
AciI	CCGC	9 cut(s)	1381, 1881, 2275, 3556, 3889, 4014, 4072, 4414, 4715
AcoI	YGGCCR	4 cut(s)	886, 3629, 4405, 4677
AcuI	CTGAAG	3 cut(s)	1080, 4642, 4746
AdeI	CACNNNGTG	1 cut(s)	92
AflIII	ACRYGT	1 cut(s)	2467
AhdI	GACNNNNNGTC	1 cut(s)	4473
AleI	CACNNNNGTG	1 cut(s)	3625
Alw21I	GWGCWC	6 cut(s)	359, 1056, 2242, 3075, 3092, 3161
Alw26I	GTCTC	6 cut(s)	791, 3508, 3995, 4383, 4481, 4701
AlwNI	CAGNNNCTG	3 cut(s)	3722, 3884, 4399
ArsI	GACNNNNNNTTYG	2 cut(s)	1184, 1216
AseI	ATTAAT	1 cut(s)	3780
Asp700I	GAANNNNTTC	5 cut(s)	1082, 1239, 1487, 2721, 3983
AspLEI	GCGC	2 cut(s)	1546, 3955
AspS9I	GGNCC	7 cut(s)	846, 947, 1089, 1159, 3105, 4249, 4325
AsuC2I	CCSGG	2 cut(s)	594, 1088
AsuHPI	GGTGA	7 cut(s)	286, 2147, 2548, 3403, 3855, 4028, 4393
AsuII	TTCGAA	2 cut(s)	4164, 4362
AvaII	GGWCC	4 cut(s)	846, 947, 4249, 4325
BaeI	ACNNNNGTAYC	2 cut(s)	2263, 2296
BalI	TGGCCA	2 cut(s)	3631, 4407
BamHI	GGATCC	2 cut(s)	583, 1325
BanI	GGYRCC	1 cut(s)	1883
BbsI	GAAGAC	3 cut(s)	2490, 2870, 4743
Bbv12I	GWGCWC	6 cut(s)	359, 1056, 2242, 3075, 3092, 3161
BbvCI	CCTCAGC	1 cut(s)	3999
BceAI	ACGGC	3 cut(s)	692, 1146, 4664
BcgI	CGANNNNNNTGC	2 cut(s)	3052, 3086
BciVI	GTATCC	1 cut(s)	1756
BclI	TGATCA	4 cut(s)	165, 333, 1368, 2970
BcnI	CCSGG	2 cut(s)	594, 1088
BcoDI	GTCTC	6 cut(s)	791, 3508, 3995, 4383, 4481, 4701
BfmI	CTRYAG	6 cut(s)	493, 971, 1203, 4107, 4565, 4746
BfuAI	ACCTGC	2 cut(s)	1657, 1940
BfuI	GTATCC	1 cut(s)	1756
BglII	AGATCT	3 cut(s)	2119, 2588, 3197
BlpI	GCTNAGC	1 cut(s)	255
BmcAI	AGTACT	1 cut(s)	1793
Bme18I	GGWCC	4 cut(s)	846, 947, 4249, 4325
BmeRI	GACNNNNNGTC	1 cut(s)	4473
BmgT120I	GGNCC	7 cut(s)	846, 947, 1089, 1159, 3105, 4249, 4325
BmrI	ACTGGG	2 cut(s)	1188, 1583
BmuI	ACTGGG	2 cut(s)	1188, 1583
BpiI	GAAGAC	3 cut(s)	2490, 2870, 4743
BplI	GAGNNNNNCTC	2 cut(s)	1413, 1445
BpmI	CTGGAG	3 cut(s)	208, 1205, 3576
Bpu10I	CCTNAGC	1 cut(s)	3999
Bpu1102I	GCTNAGC	1 cut(s)	255
Bpu14I	TTCGAA	2 cut(s)	4164, 4362
BpuEI	CTTGAG	1 cut(s)	2328
BpuMI	CCSGG	2 cut(s)	594, 1088
BsaAI	YACGTR	3 cut(s)	418, 2018, 4154
BsaBI	GATNNNNATC	2 cut(s)	588, 3003
BsaI	GGTCTC	1 cut(s)	4383
BsaJI	CCNNGG	7 cut(s)	854, 883, 1452, 1476, 1760, 2789, 4008
BsaWI	WCCGGW	1 cut(s)	1886
BsaXI	ACNNNNNCTCC	6 cut(s)	441, 471, 2322, 2352, 3184, 3214
Bse118I	RCCGGY	1 cut(s)	1091
Bse1I	ACTGG	8 cut(s)	1183, 1589, 1853, 2965, 3692, 3760, 3866, 4404
Bse3DI	GCAATG	3 cut(s)	102, 1938, 4064
Bse8I	GATNNNNATC	2 cut(s)	588, 3003
BseDI	CCNNGG	7 cut(s)	854, 883, 1452, 1476, 1760, 2789, 4008
BseJI	GATNNNNATC	2 cut(s)	588, 3003
BseMI	GCAATG	3 cut(s)	102, 1938, 4064
BseNI	ACTGG	8 cut(s)	1183, 1589, 1853, 2965, 3692, 3760, 3866, 4404
BseRI	GAGGAG	1 cut(s)	3988
BseYI	CCCAGC	1 cut(s)	4440
BsgI	GTGCAG	3 cut(s)	2037, 2904, 3683
BshNI	GGYRCC	1 cut(s)	1883
BsiHKAI	GWGCWC	6 cut(s)	359, 1056, 2242, 3075, 3092, 3161
BsiSI	CCGG	5 cut(s)	594, 1087, 1092, 1492, 1887
BslFI	GGGAC	3 cut(s)	933, 1981, 3600
BsmAI	GTCTC	6 cut(s)	791, 3508, 3995, 4383, 4481, 4701
BsmFI	GGGAC	3 cut(s)	933, 1981, 3600
BsmI	GAATGC	1 cut(s)	1619
Bso31I	GGTCTC	1 cut(s)	4383
Bsp119I	TTCGAA	2 cut(s)	4164, 4362
Bsp1286I	GDGCHC	6 cut(s)	359, 1056, 2242, 3075, 3092, 3161
Bsp1720I	GCTNAGC	1 cut(s)	255
Bsp19I	CCATGG	2 cut(s)	854, 1452
BspACI	CCGC	9 cut(s)	1381, 1881, 2275, 3556, 3889, 4014, 4072, 4414, 4715
BspHI	TCATGA	5 cut(s)	1431, 2092, 3381, 3969, 4536
BspMAI	CTGCAG	2 cut(s)	975, 4111
BspMI	ACCTGC	2 cut(s)	1657, 1940
BspQI	GCTCTTC	1 cut(s)	3418
BspT104I	TTCGAA	2 cut(s)	4164, 4362
BspT107I	GGYRCC	1 cut(s)	1883
BspTNI	GGTCTC	1 cut(s)	4383
BsrDI	GCAATG	3 cut(s)	102, 1938, 4064
BsrFI	RCCGGY	1 cut(s)	1091
BsrI	ACTGG	8 cut(s)	1183, 1589, 1853, 2965, 3692, 3760, 3866, 4404
BssAI	RCCGGY	1 cut(s)	1091
BssECI	CCNNGG	7 cut(s)	854, 883, 1452, 1476, 1760, 2789, 4008
BssT1I	CCWWGG	3 cut(s)	854, 883, 1452
Bst6I	CTCTTC	4 cut(s)	569, 2283, 3418, 4438
BstAPI	GCANNNNNTGC	3 cut(s)	68, 979, 3404
BstBAI	YACGTR	3 cut(s)	418, 2018, 4154
BstBI	TTCGAA	2 cut(s)	4164, 4362
BstC8I	GCNNGC	8 cut(s)	907, 1093, 2560, 3347, 3523, 3763, 4370, 4691
BstDSI	CCRYGG	2 cut(s)	854, 1452
BstHHI	GCGC	2 cut(s)	1546, 3955
BstMAI	GTCTC	6 cut(s)	791, 3508, 3995, 4383, 4481, 4701
BstNSI	RCATGY	6 cut(s)	683, 1233, 2471, 2773, 2803, 2918
BstSFI	CTRYAG	6 cut(s)	493, 971, 1203, 4107, 4565, 4746
BstSNI	TACGTA	1 cut(s)	418
BstV2I	GAAGAC	3 cut(s)	2490, 2870, 4743
BstX2I	RGATCY	9 cut(s)	500, 583, 1325, 2036, 2119, 2404, 2588, 2989, 3197
BstXI	CCANNNNNNTGG	2 cut(s)	21, 3627
BstYI	RGATCY	9 cut(s)	500, 583, 1325, 2036, 2119, 2404, 2588, 2989, 3197
BsuI	GTATCC	1 cut(s)	1756
BtgI	CCRYGG	2 cut(s)	854, 1452
BtgZI	GCGATG	3 cut(s)	1295, 1299, 3519
BtsI	GCAGTG	3 cut(s)	69, 249, 1689
BveI	ACCTGC	2 cut(s)	1657, 1940
Cac8I	GCNNGC	8 cut(s)	907, 1093, 2560, 3347, 3523, 3763, 4370, 4691
CaiI	CAGNNNCTG	3 cut(s)	3722, 3884, 4399
CciI	TCATGA	5 cut(s)	1431, 2092, 3381, 3969, 4536
CfoI	GCGC	2 cut(s)	1546, 3955
Cfr10I	RCCGGY	1 cut(s)	1091
Cfr13I	GGNCC	7 cut(s)	846, 947, 1089, 1159, 3105, 4249, 4325
CspCI	CAANNNNNGTGG	2 cut(s)	2137, 2172
DraI	TTTAAA	1 cut(s)	3543
DraIII	CACNNNGTG	1 cut(s)	92
DrdI	GACNNNNNNGTC	1 cut(s)	107
DriI	GACNNNNNGTC	1 cut(s)	4473
DseDI	GACNNNNNNGTC	1 cut(s)	107
EaeI	YGGCCR	4 cut(s)	886, 3629, 4405, 4677
Eam1104I	CTCTTC	4 cut(s)	569, 2283, 3418, 4438
Eam1105I	GACNNNNNGTC	1 cut(s)	4473
EarI	CTCTTC	4 cut(s)	569, 2283, 3418, 4438
Eco105I	TACGTA	1 cut(s)	418
Eco130I	CCWWGG	3 cut(s)	854, 883, 1452
Eco147I	AGGCCT	1 cut(s)	3679
Eco31I	GGTCTC	1 cut(s)	4383
Eco47I	GGWCC	4 cut(s)	846, 947, 4249, 4325
Eco57I	CTGAAG	3 cut(s)	1080, 4642, 4746
EcoO109I	RGGNCCY	3 cut(s)	947, 4249, 4325
EcoRI	GAATTC	4 cut(s)	2851, 3979, 4160, 4224
EcoT14I	CCWWGG	3 cut(s)	854, 883, 1452
EcoT22I	ATGCAT	2 cut(s)	2665, 3787
ErhI	CCWWGG	3 cut(s)	854, 883, 1452
FalI	AAGNNNNNCTT	4 cut(s)	290, 322, 2381, 2413
FaqI	GGGAC	3 cut(s)	933, 1981, 3600
FauI	CCCGC	1 cut(s)	3549
FbaI	TGATCA	4 cut(s)	165, 333, 1368, 2970
FblI	GTMKAC	3 cut(s)	1202, 3463, 4518
GlaI	GCGC	2 cut(s)	1545, 3954
GsaI	CCCAGC	1 cut(s)	4444
GsuI	CTGGAG	3 cut(s)	208, 1205, 3576
HapII	CCGG	5 cut(s)	594, 1087, 1092, 1492, 1887
HhaI	GCGC	2 cut(s)	1546, 3955
Hin6I	GCGC	2 cut(s)	1544, 3953
HinP1I	GCGC	2 cut(s)	1544, 3953
HindIII	AAGCTT	2 cut(s)	39, 3261
HpaII	CCGG	5 cut(s)	594, 1087, 1092, 1492, 1887
HphI	GGTGA	7 cut(s)	286, 2147, 2548, 3403, 3855, 4028, 4393
Hpy166II	GTNNAC	5 cut(s)	1203, 2215, 2350, 3464, 4519
Hpy8I	GTNNAC	5 cut(s)	1203, 2215, 2350, 3464, 4519
HpyCH4IV	ACGT	3 cut(s)	417, 2017, 4153
HpySE526I	ACGT	3 cut(s)	417, 2017, 4153
HspAI	GCGC	2 cut(s)	1544, 3953
KflI	GGGWCCC	1 cut(s)	947
KroI	GCCGGC	1 cut(s)	1091
KroNI	GCCGGC	1 cut(s)	1093
Ksp22I	TGATCA	4 cut(s)	165, 333, 1368, 2970
LguI	GCTCTTC	1 cut(s)	3418
LmnI	GCTCC	7 cut(s)	316, 1059, 1264, 1927, 2935, 3595, 4491
MaeII	ACGT	3 cut(s)	417, 2017, 4153
MaeIII	GTNAC	9 cut(s)	242, 481, 618, 1597, 1603, 2077, 2317, 2833, 2839
MflI	RGATCY	9 cut(s)	500, 583, 1325, 2036, 2119, 2404, 2588, 2989, 3197
MhlI	GDGCHC	6 cut(s)	359, 1056, 2242, 3075, 3092, 3161
MlsI	TGGCCA	2 cut(s)	3631, 4407
MluNI	TGGCCA	2 cut(s)	3631, 4407
MlyI	GAGTC	6 cut(s)	95, 626, 712, 1732, 2836, 3678
MmeI	TCCRAC	9 cut(s)	756, 2615, 2981, 3251, 3342, 3541, 3727, 4012, 4733
Mox20I	TGGCCA	2 cut(s)	3631, 4407
Mph1103I	ATGCAT	2 cut(s)	2665, 3787
MroNI	GCCGGC	1 cut(s)	1091
MroXI	GAANNNNTTC	5 cut(s)	1082, 1239, 1487, 2721, 3983
MscI	TGGCCA	2 cut(s)	3631, 4407
MslI	CAYNNNNRTG	3 cut(s)	1037, 3625, 3921
Msp20I	TGGCCA	2 cut(s)	3631, 4407
MspA1I	CMGCKG	4 cut(s)	2277, 3055, 3596, 4112
MspI	CCGG	5 cut(s)	594, 1087, 1092, 1492, 1887
Mva1269I	GAATGC	1 cut(s)	1619
NaeI	GCCGGC	1 cut(s)	1093
NciI	CCSGG	2 cut(s)	594, 1088
NcoI	CCATGG	2 cut(s)	854, 1452
NgoMIV	GCCGGC	1 cut(s)	1091
NmuCI	GTSAC	5 cut(s)	481, 618, 1597, 2317, 2839
NsiI	ATGCAT	2 cut(s)	2665, 3787
NspI	RCATGY	6 cut(s)	683, 1233, 2471, 2773, 2803, 2918
NspV	TTCGAA	2 cut(s)	4164, 4362
OliI	CACNNNNGTG	1 cut(s)	3625
PagI	TCATGA	5 cut(s)	1431, 2092, 3381, 3969, 4536
PaqCI	CACCTGC	2 cut(s)	1657, 1940
PceI	AGGCCT	1 cut(s)	3679
PciI	ACATGT	1 cut(s)	2467
PciSI	GCTCTTC	1 cut(s)	3418
PcsI	WCGNNNNNNNCGW	1 cut(s)	406
PctI	GAATGC	1 cut(s)	1619
PdiI	GCCGGC	1 cut(s)	1093
PdmI	GAANNNNTTC	5 cut(s)	1082, 1239, 1487, 2721, 3983
PfeI	GAWTC	7 cut(s)	488, 836, 1805, 2815, 3315, 4084, 4166
PflMI	CCANNNNNTGG	2 cut(s)	855, 4399
PleI	GAGTC	6 cut(s)	95, 625, 712, 1731, 2836, 3678
PpsI	GAGTC	6 cut(s)	95, 625, 712, 1731, 2836, 3678
Ppu21I	YACGTR	3 cut(s)	418, 2018, 4154
PpuMI	RGGWCCY	3 cut(s)	947, 4249, 4325
PscI	ACATGT	1 cut(s)	2467
PshBI	ATTAAT	1 cut(s)	3780
PsiI	TTATAA	1 cut(s)	4559
Psp5II	RGGWCCY	3 cut(s)	947, 4249, 4325
PspFI	CCCAGC	1 cut(s)	4440
PspPI	GGNCC	7 cut(s)	846, 947, 1089, 1159, 3105, 4249, 4325
PspPPI	RGGWCCY	3 cut(s)	947, 4249, 4325
PsrI	GAACNNNNNNTAC	2 cut(s)	1269, 1301
PstI	CTGCAG	2 cut(s)	975, 4111
PstNI	CAGNNNCTG	3 cut(s)	3722, 3884, 4399
PsuI	RGATCY	9 cut(s)	500, 583, 1325, 2036, 2119, 2404, 2588, 2989, 3197
PvuII	CAGCTG	3 cut(s)	3055, 3596, 4112
RseI	CAYNNNNRTG	3 cut(s)	1037, 3625, 3921
SapI	GCTCTTC	1 cut(s)	3418
Sau96I	GGNCC	7 cut(s)	846, 947, 1089, 1159, 3105, 4249, 4325
ScaI	AGTACT	1 cut(s)	1793
SchI	GAGTC	6 cut(s)	95, 626, 712, 1732, 2836, 3678
SduI	GDGCHC	6 cut(s)	359, 1056, 2242, 3075, 3092, 3161
SfcI	CTRYAG	6 cut(s)	493, 971, 1203, 4107, 4565, 4746
SfuI	TTCGAA	2 cut(s)	4164, 4362
SinI	GGWCC	4 cut(s)	846, 947, 4249, 4325
SmiMI	CAYNNNNRTG	3 cut(s)	1037, 3625, 3921
SmlI	CTYRAG	1 cut(s)	2343
SmoI	CTYRAG	1 cut(s)	2343
SnaBI	TACGTA	1 cut(s)	418
SseBI	AGGCCT	1 cut(s)	3679
SsiI	CCGC	9 cut(s)	1381, 1881, 2275, 3556, 3889, 4014, 4072, 4414, 4715
SspI	AATATT	2 cut(s)	1081, 2152
StuI	AGGCCT	1 cut(s)	3679
StyI	CCWWGG	3 cut(s)	854, 883, 1452
TaiI	ACGT	3 cut(s)	420, 2020, 4156
TaqI	TCGA	9 cut(s)	318, 2116, 2725, 3062, 3993, 4164, 4212, 4222, 4362
TaqII	GACCGA	1 cut(s)	2816
TatI	WGTACW	4 cut(s)	1791, 2593, 3439, 4319
TauI	GCSGC	2 cut(s)	1884, 4416
TfiI	GAWTC	7 cut(s)	488, 836, 1805, 2815, 3315, 4084, 4166
TseFI	GTSAC	5 cut(s)	481, 618, 1597, 2317, 2839
Tsp45I	GTSAC	5 cut(s)	481, 618, 1597, 2317, 2839
TspGWI	ACGGA	7 cut(s)	1121, 1526, 1528, 2078, 2367, 3717, 4504
Van91I	CCANNNNNTGG	2 cut(s)	855, 4399
VpaK11BI	GGWCC	4 cut(s)	846, 947, 4249, 4325
VspI	ATTAAT	1 cut(s)	3780
XbaI	TCTAGA	1 cut(s)	2242
XceI	RCATGY	6 cut(s)	683, 1233, 2471, 2773, 2803, 2918
XcmI	CCANNNNNNNNNTGG	3 cut(s)	545, 4400, 4638
XmiI	GTMKAC	3 cut(s)	1202, 3463, 4518
XmnI	GAANNNNTTC	5 cut(s)	1082, 1239, 1487, 2721, 3983
ZrmI	AGTACT	1 cut(s)	1793
Zsp2I	ATGCAT	2 cut(s)	2665, 3787

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.