DNA recombination
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G14800 AT1G36030 AT1G67623 AT1G74875 AT2G35280 AT3G30430 AT5G17167 |
| fragaria_vesca | FvH4_4g17961 |
| malus_domestica | MD16G1169500.v1.1 MD16G1170100.v1.1 |
| prunus_persica | Prupe.1G137300_v2.0.a1 Prupe.1G137300_v2.0.a1 |
| pyrus_communis | pycom01g02790 pycom01g02800 pycom16g14270 |
| rosa_chinensis | RchiOBHm_Chr4g0422141 |
| rosa_laevigata | RLG00000007631 |
| rosa_multiflora | Rmu_sc0004902.1_g000005 |
| rosa_roxburghii | Rroxscaffold_5G00364220 Rroxscaffold_5G00364230 |
| rosa_rugosa | Rorug04G0177600 |
| rosa_samantha | Rh4AG237200 Rh4BG240000 Rh4CG251900 Rh4DG236100 |
| rosa_wichuraiana | Rw4G020520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 12 |
| AcuI | CTGAAG | 1 cut(s) | 114 |
| AcvI | CACGTG | 1 cut(s) | 157 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 203 |
| AflIII | ACRYGT | 2 cut(s) | 154, 156 |
| AgsI | TTSAA | 1 cut(s) | 163 |
| AluBI | AGCT | 3 cut(s) | 17, 83, 92 |
| AluI | AGCT | 3 cut(s) | 17, 83, 92 |
| AlwI | GGATC | 1 cut(s) | 12 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 99 |
| AsuHPI | GGTGA | 1 cut(s) | 199 |
| BaeGI | GKGCMC | 1 cut(s) | 209 |
| BamHI | GGATCC | 1 cut(s) | 4 |
| BbrPI | CACGTG | 1 cut(s) | 157 |
| BfaI | CTAG | 1 cut(s) | 131 |
| BglII | AGATCT | 1 cut(s) | 49 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| BmsI | GCATC | 1 cut(s) | 146 |
| BpuEI | CTTGAG | 1 cut(s) | 30 |
| BsaAI | YACGTR | 1 cut(s) | 157 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 51, 81 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 203 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 203 |
| BseSI | GKGCMC | 1 cut(s) | 209 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 203 |
| BsmI | GAATGC | 1 cut(s) | 111 |
| Bsp1286I | GDGCHC | 1 cut(s) | 209 |
| Bsp143I | GATC | 2 cut(s) | 4, 49 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BspPI | GGATC | 1 cut(s) | 12 |
| BssMI | GATC | 2 cut(s) | 4, 49 |
| Bst4CI | ACNGT | 1 cut(s) | 198 |
| BstBAI | YACGTR | 1 cut(s) | 157 |
| BstC8I | GCNNGC | 1 cut(s) | 209 |
| BstKTI | GATC | 2 cut(s) | 7, 52 |
| BstMBI | GATC | 2 cut(s) | 4, 49 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 89 |
| BstSLI | GKGCMC | 1 cut(s) | 209 |
| BstX2I | RGATCY | 2 cut(s) | 4, 49 |
| BstYI | RGATCY | 2 cut(s) | 4, 49 |
| Cac8I | GCNNGC | 1 cut(s) | 209 |
| CviJI | RGCY | 3 cut(s) | 17, 83, 92 |
| CviKI_1 | RGCY | 3 cut(s) | 17, 83, 92 |
| DpnI | GATC | 2 cut(s) | 6, 51 |
| DpnII | GATC | 2 cut(s) | 4, 49 |
| Eco57I | CTGAAG | 1 cut(s) | 114 |
| Eco72I | CACGTG | 1 cut(s) | 157 |
| FaiI | YATR | 3 cut(s) | 121, 228, 236 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 39, 71 |
| FspBI | CTAG | 1 cut(s) | 131 |
| HphI | GGTGA | 1 cut(s) | 199 |
| Hpy188III | TCNNGA | 2 cut(s) | 47, 240 |
| HpyAV | CCTTC | 1 cut(s) | 228 |
| HpyCH4III | ACNGT | 1 cut(s) | 198 |
| HpyCH4IV | ACGT | 1 cut(s) | 156 |
| HpyCH4V | TGCA | 3 cut(s) | 111, 123, 137 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 89 |
| HpySE526I | ACGT | 1 cut(s) | 156 |
| Kzo9I | GATC | 2 cut(s) | 4, 49 |
| LmnI | GCTCC | 1 cut(s) | 80 |
| LweI | GCATC | 1 cut(s) | 146 |
| MaeI | CTAG | 1 cut(s) | 131 |
| MaeII | ACGT | 1 cut(s) | 156 |
| MalI | GATC | 2 cut(s) | 6, 51 |
| MboI | GATC | 2 cut(s) | 4, 49 |
| MboII | GAAGA | 2 cut(s) | 107, 202 |
| MfeI | CAATTG | 1 cut(s) | 106 |
| MflI | RGATCY | 2 cut(s) | 4, 49 |
| MhlI | GDGCHC | 1 cut(s) | 209 |
| MluCI | AATT | 1 cut(s) | 106 |
| MmeI | TCCRAC | 1 cut(s) | 58 |
| MnlI | CCTC | 3 cut(s) | 28, 53, 54 |
| MroXI | GAANNNNTTC | 1 cut(s) | 99 |
| MseI | TTAA | 1 cut(s) | 171 |
| MspA1I | CMGCKG | 1 cut(s) | 92 |
| MunI | CAATTG | 1 cut(s) | 106 |
| Mva1269I | GAATGC | 1 cut(s) | 111 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 89 |
| NdeII | GATC | 2 cut(s) | 4, 49 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| PctI | GAATGC | 1 cut(s) | 111 |
| PdmI | GAANNNNTTC | 1 cut(s) | 99 |
| PmaCI | CACGTG | 1 cut(s) | 157 |
| PmlI | CACGTG | 1 cut(s) | 157 |
| Ppu21I | YACGTR | 1 cut(s) | 157 |
| PspCI | CACGTG | 1 cut(s) | 157 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| PsuI | RGATCY | 2 cut(s) | 4, 49 |
| PvuII | CAGCTG | 1 cut(s) | 92 |
| SaqAI | TTAA | 1 cut(s) | 171 |
| Sau3AI | GATC | 2 cut(s) | 4, 49 |
| SduI | GDGCHC | 1 cut(s) | 209 |
| SetI | ASST | 6 cut(s) | 19, 85, 94, 136, 159, 220 |
| SfaNI | GCATC | 1 cut(s) | 146 |
| SmlI | CTYRAG | 1 cut(s) | 45 |
| SmoI | CTYRAG | 1 cut(s) | 45 |
| Sse9I | AATT | 1 cut(s) | 106 |
| SspMI | CTAG | 1 cut(s) | 131 |
| TaaI | ACNGT | 1 cut(s) | 198 |
| TaiI | ACGT | 1 cut(s) | 159 |
| TasI | AATT | 1 cut(s) | 106 |
| Tru1I | TTAA | 1 cut(s) | 171 |
| Tru9I | TTAA | 1 cut(s) | 171 |
| TspDTI | ATGAA | 1 cut(s) | 243 |
| XmnI | GAANNNNTTC | 1 cut(s) | 99 |
| XspI | CTAG | 1 cut(s) | 131 |