AT1G44170

Aldehyde dehydrogenase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
16796400 .. 16800321
3922 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G44170.1

Sequence Viewer

Length: 1455 bp
ATGGCTGCGAAGAAGGTTTTTGGATCGGCGGAAGCGAGTAATTTGGTGACGGAGCTTCGTCGGAGTTTTGATGATGGTGTGACACGTGGTTATGAATGGAGAGTGACTCAGCTTAAGAAACTGATGATTATTTGTGATAATCATGAGCCTGAGATCGTCGCGGCTCTTCGCGATGATCTTGGTAAGCCTGAGCTTGAATCTTCTGTTTATGAGGTATCTCTACTGAGAAACTCTATCAAGTTGGCTCTTAAGCAGCTAAAGAACTGGATGGCTCCGGAGAAGGCAAAGACTTCTCTAACAACGTTTCCTGCATCCGCGGAGATTGTGTCTGAGCCTCTTGGTGTTGTGCTAGTGATCTCGGCTTGGAACTATCCTTTTCTGTTGTCTATTGATCCTGTTATTGGTGCAATTTCTGCTGGGAATGCTGTTGTTTTAAAGCCATCAGAATTGGCTCCAGCTTCGTCAGCTCTGCTCACTAAGTTACTGGAACAGTATCTTGATCCTTCTGCGGTGCGAGTTGTCGAAGGAGCTGTTACCGAAACAAGTGCTCTGCTAGAGCAGAAGTGGGACAAGATATTCTACACAGGTAGTTCAAAAATCGGACGTGTCATAATGGCGGCAGCTGCGAAGCATCTCACACCGGTTGTTCTAGAGCTTGGAGGAAAATCTCCTGTCGTTGTAGACTCGGATACCGATTTGAAAGTTACCGTCAGGCGGATAATCGTAGGCAAATGGGGTTGTAACAACGGACAGGCGTGCGTTTCGCCGGACTATATCTTGACGACAAAAGAATATGCTCCTAAATTGATTGATGCCATGAAGCTTGAATTGGAGAAATTTTATGGGAAGAACCCTATAGAGTCGAAAGATATGTCACGTATCGTAAACTCGAATCACTTTGATCGCTTGTCTAAGTTGTTAGACGAGAAGGAAGTTTCTGACAAAATTGTCTATGGTGGTGAAAAGGACAGAGAAAACTTGAAAATTGCTCCGACAATCTTGCTCGATGTACCATTAGATTCTCTGATCATGAGTGAAGAAATATTTGGCCCTCTCCTTCCAATCCTCACGCTTAACAACTTGGAAGAGAGCTTTGACGTGATTCGTTCTCGACCTAAGCCACTTGCGGCATACTTGTTTACACATAACAAGAAGTTGAAAGAGAGATTCGCAGCGACAGTCTCCGCTGGAGGCATAGTAGTCAATGACATAGCTGTTCATCTTGCACTTCACACATTGCCATTCGGAGGAGTTGGTGAAAGTGGAATGGGTGCTTACCATGGTAAATTCTCATTTGATGCTTTTAGTCACAAGAAGGCGGTTCTCTACAGAAGCCTTTTCGGTGATTCAGCCGTCAGGTATCCGCCATACTCGAGAGGAAAGCTTAGATTGTTAAAAGCCCTTGTCGACAGCAATATATTCGATTTATTCAAAGTCCTTCTCGGTTTAGCTTAA

Protein Analysis

484

Amino Acids

53.16

Weight (kDa)

8.43

Isoelectric Point (pI)

38.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldedh PF00171 33 - 441 4.6e-83 Aldehyde dehydrogenase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 947
AccI GTMKAC 2 cut(s) 681, 1407
AccII CGCG 3 cut(s) 161, 171, 317
AccIII TCCGGA 1 cut(s) 274
AclI AACGTT 1 cut(s) 302
AclWI GGATC 3 cut(s) 31, 386, 494
AcsI RAATTY 2 cut(s) 836, 1286
AcvI CACGTG 1 cut(s) 86
AfaI GTAC 1 cut(s) 1011
AfiI CCNNNNNNNGG 3 cut(s) 401, 714, 1247
AflII CTTAAG 2 cut(s) 113, 248
AflIII ACRYGT 2 cut(s) 83, 604
AgeI ACCGGT 1 cut(s) 640
AgsI TTSAA 7 cut(s) 197, 594, 700, 827, 982, 1159, 1432
AjiI CACGTC 2 cut(s) 605, 1099
AjuI GAANNNNNNNTTGG 4 cut(s) 812, 844, 1029, 1061
Alw21I GWGCWC 1 cut(s) 550
Alw26I GTCTC 1 cut(s) 1186
AlwI GGATC 3 cut(s) 31, 386, 494
Ama87I CYCGRG 1 cut(s) 1372
Aor13HI TCCGGA 1 cut(s) 274
AoxI GGCC 1 cut(s) 1048
ApeKI GCWGC 5 cut(s) 5, 253, 620, 623, 1172
ApoI RAATTY 2 cut(s) 836, 1286
ArsI GACNNNNNNTTYG 2 cut(s) 857, 889
AsiGI ACCGGT 1 cut(s) 640
AspS9I GGNCC 1 cut(s) 1049
AsuHPI GGTGA 4 cut(s) 58, 971, 1268, 1355
AvaI CYCGRG 1 cut(s) 1372
BbrPI CACGTG 1 cut(s) 86
Bbv12I GWGCWC 1 cut(s) 550
BbvI GCAGC 4 cut(s) 265, 610, 632, 1184
BccI CCATC 3 cut(s) 68, 262, 448
BceAI ACGGC 1 cut(s) 1337
BcgI CGANNNNNNTGC 6 cut(s) 527, 561, 982, 1016, 1402, 1436
BciVI GTATCC 2 cut(s) 682, 1371
BclI TGATCA 1 cut(s) 1026
BcoDI GTCTC 1 cut(s) 1186
BfaI CTAG 3 cut(s) 350, 554, 650
BfmI CTRYAG 2 cut(s) 855, 1327
BfrI CTTAAG 2 cut(s) 113, 248
BfuI GTATCC 2 cut(s) 682, 1371
BisI GCNGC 8 cut(s) 6, 162, 254, 618, 621, 624, 1128, 1173
BlsI GCNGC 8 cut(s) 7, 163, 255, 619, 622, 625, 1129, 1174
BmeT110I CYCGRG 1 cut(s) 1372
BmgBI CACGTC 2 cut(s) 605, 1099
BmgT120I GGNCC 1 cut(s) 1049
BmiI GGNNCC 2 cut(s) 273, 453
BmsI GCATC 4 cut(s) 320, 640, 802, 1288
BplI GAGNNNNNCTC 2 cut(s) 91, 123
BpmI CTGGAG 2 cut(s) 438, 1209
Bpu10I CCTNAGC 2 cut(s) 189, 1116
BsaAI YACGTR 2 cut(s) 86, 878
BsaJI CCNNGG 2 cut(s) 315, 1279
BsaWI WCCGGW 2 cut(s) 274, 640
BsaXI ACNNNNNCTCC 4 cut(s) 311, 341, 1182, 1212
Bsc4I CCNNNNNNNGG 3 cut(s) 401, 714, 1247
Bse118I RCCGGY 1 cut(s) 640
Bse1I ACTGG 2 cut(s) 269, 489
Bse3DI GCAATG 1 cut(s) 1235
BseAI TCCGGA 1 cut(s) 274
BseDI CCNNGG 2 cut(s) 315, 1279
BseGI GGATG 2 cut(s) 273, 311
BseLI CCNNNNNNNGG 3 cut(s) 401, 714, 1247
BseMI GCAATG 1 cut(s) 1235
BseMII CTCAG 5 cut(s) 122, 141, 180, 215, 321
BseNI ACTGG 2 cut(s) 269, 489
BseRI GAGGAG 1 cut(s) 1263
BseXI GCAGC 4 cut(s) 265, 610, 632, 1184
BseYI CCCAGC 1 cut(s) 416
Bsh1236I CGCG 3 cut(s) 161, 171, 317
BshFI GGCC 1 cut(s) 1050
BshTI ACCGGT 1 cut(s) 640
BsiHKAI GWGCWC 1 cut(s) 550
BsiHKCI CYCGRG 1 cut(s) 1372
BsiSI CCGG 3 cut(s) 275, 641, 767
BslFI GGGAC 1 cut(s) 581
BslI CCNNNNNNNGG 3 cut(s) 401, 714, 1247
BsmAI GTCTC 1 cut(s) 1186
BsmFI GGGAC 1 cut(s) 581
BsmI GAATGC 1 cut(s) 427
BsnI GGCC 1 cut(s) 1050
BsoBI CYCGRG 1 cut(s) 1372
Bsp1286I GDGCHC 1 cut(s) 550
Bsp13I TCCGGA 1 cut(s) 274
Bsp143I GATC 8 cut(s) 23, 153, 175, 354, 391, 499, 901, 1026
Bsp19I CCATGG 1 cut(s) 1279
Bsp68I TCGCGA 1 cut(s) 171
BspANI GGCC 1 cut(s) 1050
BspCNI CTCAG 5 cut(s) 121, 142, 181, 216, 322
BspEI TCCGGA 1 cut(s) 274
BspFNI CGCG 3 cut(s) 161, 171, 317
BspHI TCATGA 2 cut(s) 142, 1029
BspLI GGNNCC 2 cut(s) 273, 453
BspPI GGATC 3 cut(s) 31, 386, 494
BspQI GCTCTTC 1 cut(s) 171
BspTI CTTAAG 2 cut(s) 113, 248
BsrDI GCAATG 1 cut(s) 1235
BsrFI RCCGGY 1 cut(s) 640
BsrI ACTGG 2 cut(s) 269, 489
BssAI RCCGGY 1 cut(s) 640
BssECI CCNNGG 2 cut(s) 315, 1279
BssMI GATC 8 cut(s) 23, 153, 175, 354, 391, 499, 901, 1026
BssT1I CCWWGG 1 cut(s) 1279
Bst4CI ACNGT 3 cut(s) 492, 709, 1180
Bst6I CTCTTC 2 cut(s) 171, 1080
BstAFI CTTAAG 2 cut(s) 113, 248
BstAPI GCANNNNNTGC 1 cut(s) 413
BstBAI YACGTR 2 cut(s) 86, 878
BstC8I GCNNGC 1 cut(s) 757
BstDEI CTNAG 9 cut(s) 108, 150, 189, 224, 330, 477, 912, 1116, 1385
BstDSI CCRYGG 2 cut(s) 315, 1279
BstF5I GGATG 2 cut(s) 273, 311
BstFNI CGCG 3 cut(s) 161, 171, 317
BstKTI GATC 8 cut(s) 26, 156, 178, 357, 394, 502, 904, 1029
BstMAI GTCTC 1 cut(s) 1186
BstMBI GATC 8 cut(s) 23, 153, 175, 354, 391, 499, 901, 1026
BstMWI GCNNNNNNNGC 4 cut(s) 413, 422, 464, 623
BstSFI CTRYAG 2 cut(s) 855, 1327
BstUI CGCG 3 cut(s) 161, 171, 317
BstV1I GCAGC 4 cut(s) 265, 610, 632, 1184
BsuI GTATCC 2 cut(s) 682, 1371
BsuRI GGCC 1 cut(s) 1050
BtgI CCRYGG 2 cut(s) 315, 1279
BtgZI GCGATG 1 cut(s) 186
BtrI CACGTC 2 cut(s) 605, 1099
BtsCI GGATG 2 cut(s) 273, 311
BtuMI TCGCGA 1 cut(s) 171
Cac8I GCNNGC 1 cut(s) 757
CciI TCATGA 2 cut(s) 142, 1029
Cfr10I RCCGGY 1 cut(s) 640
Cfr13I GGNCC 1 cut(s) 1049
Cfr42I CCGCGG 1 cut(s) 318
Csp6I GTAC 1 cut(s) 1010
CspAI ACCGGT 1 cut(s) 640
CviAII CATG 4 cut(s) 143, 817, 1030, 1280
CviQI GTAC 1 cut(s) 1010
DdeI CTNAG 9 cut(s) 108, 150, 189, 224, 330, 477, 912, 1116, 1385
DpnI GATC 8 cut(s) 25, 155, 177, 356, 393, 501, 903, 1028
DpnII GATC 8 cut(s) 23, 153, 175, 354, 391, 499, 901, 1026
DraI TTTAAA 1 cut(s) 435
DrdI GACNNNNNNGTC 1 cut(s) 947
DseDI GACNNNNNNGTC 1 cut(s) 947
Eam1104I CTCTTC 2 cut(s) 171, 1080
EarI CTCTTC 2 cut(s) 171, 1080
EciI GGCGGA 3 cut(s) 44, 730, 1353
Eco130I CCWWGG 1 cut(s) 1279
Eco72I CACGTG 1 cut(s) 86
Eco88I CYCGRG 1 cut(s) 1372
EcoT14I CCWWGG 1 cut(s) 1279
ErhI CCWWGG 1 cut(s) 1279
FaeI CATG 4 cut(s) 146, 820, 1033, 1283
FaqI GGGAC 1 cut(s) 581
FatI CATG 4 cut(s) 142, 816, 1029, 1279
FbaI TGATCA 1 cut(s) 1026
FblI GTMKAC 2 cut(s) 681, 1407
Fnu4HI GCNGC 8 cut(s) 6, 162, 254, 618, 621, 624, 1128, 1173
FokI GGATG 2 cut(s) 280, 298
Fsp4HI GCNGC 8 cut(s) 6, 162, 254, 618, 621, 624, 1128, 1173
FspBI CTAG 3 cut(s) 350, 554, 650
GluI GCNGC 8 cut(s) 6, 162, 254, 618, 621, 624, 1128, 1173
GsaI CCCAGC 1 cut(s) 420
GsuI CTGGAG 2 cut(s) 438, 1209
HaeIII GGCC 1 cut(s) 1050
HapII CCGG 3 cut(s) 275, 641, 767
Hin1II CATG 4 cut(s) 146, 820, 1033, 1283
HincII GTYRAC 1 cut(s) 1408
HindII GTYRAC 1 cut(s) 1408
HindIII AAGCTT 2 cut(s) 821, 1382
HinfI GANTC 9 cut(s) 106, 197, 683, 860, 892, 1019, 1102, 1167, 1346
HpaII CCGG 3 cut(s) 275, 641, 767
HphI GGTGA 4 cut(s) 58, 971, 1268, 1355
Hpy166II GTNNAC 4 cut(s) 682, 886, 1140, 1408
Hpy188I TCNGA 9 cut(s) 63, 331, 445, 602, 688, 940, 993, 1026, 1247
Hpy188III TCNNGA 9 cut(s) 143, 170, 275, 497, 650, 778, 1030, 1110, 1374
Hpy8I GTNNAC 4 cut(s) 682, 886, 1140, 1408
Hpy99I CGWCG 2 cut(s) 63, 161
HpyAV CCTTC 8 cut(s) 7, 274, 513, 518, 922, 1067, 1309, 1448
HpyCH4III ACNGT 3 cut(s) 492, 709, 1180
HpyCH4IV ACGT 5 cut(s) 85, 302, 604, 877, 1098
HpyCH4V TGCA 3 cut(s) 311, 407, 1226
HpyF10VI GCNNNNNNNGC 4 cut(s) 413, 422, 464, 623
HpyF3I CTNAG 9 cut(s) 108, 150, 189, 224, 330, 477, 912, 1116, 1385
HpySE526I ACGT 5 cut(s) 85, 302, 604, 877, 1098
Hsp92II CATG 4 cut(s) 146, 820, 1033, 1283
Kpn2I TCCGGA 1 cut(s) 274
Ksp22I TGATCA 1 cut(s) 1026
KspI CCGCGG 1 cut(s) 318
Kzo9I GATC 8 cut(s) 23, 153, 175, 354, 391, 499, 901, 1026
LguI GCTCTTC 1 cut(s) 171
LmnI GCTCC 6 cut(s) 52, 277, 457, 527, 802, 994
Lsp1109I GCAGC 4 cut(s) 265, 610, 632, 1184
LweI GCATC 4 cut(s) 320, 640, 802, 1288
MaeI CTAG 3 cut(s) 350, 554, 650
MaeII ACGT 5 cut(s) 85, 302, 604, 877, 1098
MaeIII GTNAC 9 cut(s) 46, 79, 103, 480, 532, 703, 740, 873, 1307
MalI GATC 8 cut(s) 25, 155, 177, 356, 393, 501, 903, 1028
MboI GATC 8 cut(s) 23, 153, 175, 354, 391, 499, 901, 1026
MboII GAAGA 6 cut(s) 22, 158, 192, 859, 1049, 1097
MhlI GDGCHC 1 cut(s) 550
MluCI AATT 9 cut(s) 40, 408, 446, 803, 827, 836, 945, 984, 1286
MlyI GAGTC 3 cut(s) 100, 677, 869
MmeI TCCRAC 2 cut(s) 41, 1016
MnlI CCTC 8 cut(s) 205, 345, 653, 1062, 1076, 1184, 1241, 1370
MroI TCCGGA 1 cut(s) 274
MseI TTAA 6 cut(s) 114, 249, 434, 1074, 1394, 1453
MspA1I CMGCKG 3 cut(s) 317, 623, 1187
MspCI CTTAAG 2 cut(s) 113, 248
MspI CCGG 3 cut(s) 275, 641, 767
Mva1269I GAATGC 1 cut(s) 427
MvnI CGCG 3 cut(s) 161, 171, 317
MwoI GCNNNNNNNGC 4 cut(s) 413, 422, 464, 623
NcoI CCATGG 1 cut(s) 1279
NdeII GATC 8 cut(s) 23, 153, 175, 354, 391, 499, 901, 1026
NlaIII CATG 4 cut(s) 146, 820, 1033, 1283
NlaIV GGNNCC 2 cut(s) 273, 453
NmeAIII GCCGAG 1 cut(s) 338
NmuCI GTSAC 5 cut(s) 46, 79, 103, 873, 1307
NruI TCGCGA 1 cut(s) 171
PaeR7I CTCGAG 1 cut(s) 1372
PagI TCATGA 2 cut(s) 142, 1029
PciSI GCTCTTC 1 cut(s) 171
PcsI WCGNNNNNNNCGW 1 cut(s) 32
PctI GAATGC 1 cut(s) 427
PfeI GAWTC 6 cut(s) 197, 892, 1019, 1102, 1167, 1346
PinAI ACCGGT 1 cut(s) 640
PkrI GCNGC 8 cut(s) 7, 163, 255, 619, 622, 625, 1129, 1174
PleI GAGTC 3 cut(s) 100, 677, 868
PmaCI CACGTG 1 cut(s) 86
PmlI CACGTG 1 cut(s) 86
PpsI GAGTC 3 cut(s) 100, 677, 868
Ppu21I YACGTR 2 cut(s) 86, 878
Psp1406I AACGTT 1 cut(s) 302
PspCI CACGTG 1 cut(s) 86
PspFI CCCAGC 1 cut(s) 416
PspN4I GGNNCC 2 cut(s) 273, 453
PspPI GGNCC 1 cut(s) 1049
PvuII CAGCTG 1 cut(s) 623
RruI TCGCGA 1 cut(s) 171
RsaI GTAC 1 cut(s) 1011
RsaNI GTAC 1 cut(s) 1010
SacII CCGCGG 1 cut(s) 318
SalI GTCGAC 1 cut(s) 1406
SapI GCTCTTC 1 cut(s) 171
SaqAI TTAA 6 cut(s) 114, 249, 434, 1074, 1394, 1453
SatI GCNGC 8 cut(s) 6, 162, 254, 618, 621, 624, 1128, 1173
Sau3AI GATC 8 cut(s) 23, 153, 175, 354, 391, 499, 901, 1026
Sau96I GGNCC 1 cut(s) 1049
SchI GAGTC 3 cut(s) 100, 677, 869
SduI GDGCHC 1 cut(s) 550
SfaNI GCATC 4 cut(s) 320, 640, 802, 1288
SfcI CTRYAG 2 cut(s) 855, 1327
Sfr274I CTCGAG 1 cut(s) 1372
Sfr303I CCGCGG 1 cut(s) 318
SgrBI CCGCGG 1 cut(s) 318
SlaI CTCGAG 1 cut(s) 1372
SmlI CTYRAG 3 cut(s) 113, 248, 1372
SmoI CTYRAG 3 cut(s) 113, 248, 1372
Sse9I AATT 9 cut(s) 40, 408, 446, 803, 827, 836, 945, 984, 1286
SspI AATATT 1 cut(s) 1044
SspMI CTAG 3 cut(s) 350, 554, 650
StyI CCWWGG 1 cut(s) 1279
TaaI ACNGT 3 cut(s) 492, 709, 1180
TaiI ACGT 5 cut(s) 88, 305, 607, 880, 1101
TaqI TCGA 8 cut(s) 522, 863, 890, 1005, 1111, 1373, 1407, 1422
TasI AATT 9 cut(s) 40, 408, 446, 803, 827, 836, 945, 984, 1286
TauI GCSGC 3 cut(s) 164, 620, 1130
TfiI GAWTC 6 cut(s) 197, 892, 1019, 1102, 1167, 1346
Tru1I TTAA 6 cut(s) 114, 249, 434, 1074, 1394, 1453
Tru9I TTAA 6 cut(s) 114, 249, 434, 1074, 1394, 1453
TseFI GTSAC 5 cut(s) 46, 79, 103, 873, 1307
TseI GCWGC 5 cut(s) 5, 253, 620, 623, 1172
Tsp45I GTSAC 5 cut(s) 46, 79, 103, 873, 1307
TspDTI ATGAA 3 cut(s) 108, 833, 1208
TspGWI ACGGA 2 cut(s) 65, 762
Vha464I CTTAAG 2 cut(s) 113, 248
XapI RAATTY 2 cut(s) 836, 1286
XbaI TCTAGA 1 cut(s) 649
XhoI CTCGAG 1 cut(s) 1372
XmiI GTMKAC 2 cut(s) 681, 1407
XspI CTAG 3 cut(s) 350, 554, 650
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.