pycom15g31000

Belongs to the aldehyde dehydrogenase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
29102011 .. 29112111
10101 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g31000.8

Sequence Viewer

Length: 1542 bp
ATGCTCTTCACTCTGACCTCTCCAAACCTGAATTTGAAGCCTACGTTCATGAGGGGTTCAATGGCGATTGAGGAGAAGAAGCAGACGGCGGCCAAGCCTTTCGACGAAGAAGCTGCCTCTGCGGTGGTGAAGGAGCTGAGAGCGTCCTTCGTCTCCGGCAAGACTCGAAGCTATCAATGGAGGGTGTCGCAGTTCAAGTGCATACTCAAGCTCATCACCAAAAACGAGCGGGAGATCGTTGACGCTCTCCGCTCCGACCTCTCCAAGCCCGAACTCGAATCCCAAGTCTACGAGATATCTATGTTAAAAAACTCGTGTAAATTGGCAATTAAGGAGCTGAAGAAATGGATGAAGCCAGAAAAGGTTAAAACTTCGATAGCAGTTTTTCCTGCGTCAGCTGAAATAGTGTCTGAACCGCTTGGTGCTATACTAGTAATTTCAGCATGGAATTATCCTTTCTTACTGTCACTTGATCCAGTTGTTGGAGCCATTGCGTCTGGTAATGTTGTGGTTCTTAAACCATCAGAACTTGCTCCAGCCTCGTCGTCATTGCTTGCAAAACTATTAGGTGAATATATGGATAGCTCTTGTATAAGAGTCGTTGAGGGGGCTGTTGCTGAAACATCTGCACTGTTAGAGCAAAAGTGGGATAAAATATGTTACACAGGAAATGCAAGAGTGGGACGTATAGTGATGGCTAGTGCTGCAAAGCACCTTACACCTGTTCTATTGGAGCTTGGAGGAAAATCTCCTGTTATTGTTGATTCTGGCATTAACTTACAAGTTGCTTGTAGGCGAATAATCGTTGGTAAGTGGGGGTGTAATAATGGACAGGCTTGCGTCTCCCCTGATTATATCATAACAACAAAAGATTTTGCTCCTAAGCTGGTGGATTCTCTGAAACAAGAATTGGAGAACTTCTATGGAAAGAATCAACTAGAATCAAAAGATTTGTCTCGTATTGTGAATCCTCATCACTTTGCTCGCTTGACGAAGCTCTTGTATGAGGATAAGGTTTCTGGATCGATCGTCCATGGAGGTGAAATGGACAAAACCAACTTGAGGATAGCTCCTACCATCTTGCTCGATGTTCCACAAGACTCTTTGATCATGAGTGAGGAAATATTTGGCCCCTTGCTTCCCATTCTCACGGTCGACAAAATGGAAGACAGTTTTGATTTGATAAACTCAGGAACAAAGCCTCTTGCTGCGTATTTGTTTACCAACAAGAAGAAGCTGAAGGAGCACTTTGTAAATACCGTCTCTGCCGGTGGTTTGGTTGTCAATGACACTACCATACATCTTGCTGTTCCCTCCTTGCCTTTTGGAGGAGTTGGGGAAAGCGGAATGGGTGCGTACCATGGAAAATTCTCTTTCGACGCTTTTAGCCATAAGAAGGCAGTTGTTTATCGAGGTTTCTTCGGTGATGCTTCCATAAGATACCCACCATACACAAAGGGGAAGCTAAGAATTCTGAAGGCTCTTATCAGCGGTGGCATATTAAGCATAATCTGTGCTCTGTTCGGAAGGCCTAAGGCTTAA

Protein Analysis

514

Amino Acids

56.08

Weight (kDa)

9.15

Isoelectric Point (pI)

36.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 482
AccBSI CCGCTC 2 cut(s) 229, 252
AccI GTMKAC 2 cut(s) 288, 1155
AciI CCGC 7 cut(s) 89, 122, 229, 250, 416, 1344, 1491
AclWI GGATC 2 cut(s) 467, 1030
AcoI YGGCCR 1 cut(s) 90
AcsI RAATTY 3 cut(s) 31, 1367, 1470
AcuI CTGAAG 3 cut(s) 359, 1259, 1496
AfaI GTAC 1 cut(s) 1358
AfiI CCNNNNNNNGG 4 cut(s) 482, 1062, 1328, 1396
AgsI TTSAA 3 cut(s) 37, 60, 196
AhlI ACTAGT 1 cut(s) 430
AjuI GAANNNNNNNTTGG 2 cut(s) 893, 925
Alw21I GWGCWC 2 cut(s) 1248, 1519
Alw26I GTCTC 4 cut(s) 157, 847, 960, 1267
AlwI GGATC 2 cut(s) 467, 1030
AoxI GGCC 3 cut(s) 90, 1129, 1529
ApeKI GCWGC 3 cut(s) 113, 704, 1208
ApoI RAATTY 3 cut(s) 31, 1367, 1470
ArsI GACNNNNNNTTYG 4 cut(s) 270, 302, 938, 970
AspS9I GGNCC 1 cut(s) 1130
AsuHPI GGTGA 5 cut(s) 139, 208, 581, 1052, 1436
AxyI CCTNAGG 1 cut(s) 1533
BauI CACGAG 1 cut(s) 313
BbsI GAAGAC 1 cut(s) 1173
Bbv12I GWGCWC 2 cut(s) 1248, 1519
BbvI GCAGC 3 cut(s) 100, 691, 1195
BccI CCATC 3 cut(s) 529, 688, 1085
BceAI ACGGC 1 cut(s) 102
BcgI CGANNNNNNTGC 2 cut(s) 95, 129
BclI TGATCA 1 cut(s) 1107
BcoDI GTCTC 4 cut(s) 157, 847, 960, 1267
BcuI ACTAGT 1 cut(s) 430
BfaI CTAG 3 cut(s) 431, 699, 938
BisI GCNGC 4 cut(s) 90, 114, 705, 1209
BlsI GCNGC 4 cut(s) 91, 115, 706, 1210
BmgT120I GGNCC 1 cut(s) 1130
BmiI GGNNCC 2 cut(s) 487, 1132
BmsI GCATC 1 cut(s) 1417
BpiI GAAGAC 1 cut(s) 1173
BplI GAGNNNNNCTC 2 cut(s) 1054, 1086
BpmI CTGGAG 1 cut(s) 519
Bpu10I CCTNAGC 1 cut(s) 882
BpuEI CTTGAG 2 cut(s) 191, 1081
Bsa29I ATCGAT 1 cut(s) 1025
BsaJI CCNNGG 2 cut(s) 1033, 1360
Bsc4I CCNNNNNNNGG 4 cut(s) 482, 1062, 1328, 1396
Bse118I RCCGGY 1 cut(s) 1268
Bse1I ACTGG 1 cut(s) 476
Bse21I CCTNAGG 1 cut(s) 1533
Bse3DI GCAATG 2 cut(s) 489, 548
BseCI ATCGAT 1 cut(s) 1025
BseDI CCNNGG 2 cut(s) 1033, 1360
BseGI GGATG 1 cut(s) 354
BseLI CCNNNNNNNGG 4 cut(s) 482, 1062, 1328, 1396
BseMI GCAATG 2 cut(s) 489, 548
BseMII CTCAG 2 cut(s) 128, 1203
BseNI ACTGG 1 cut(s) 476
BseRI GAGGAG 2 cut(s) 86, 1344
BseXI GCAGC 3 cut(s) 100, 691, 1195
BsgI GTGCAG 1 cut(s) 612
Bsh1285I CGRYCG 2 cut(s) 1029, 1155
BshFI GGCC 3 cut(s) 92, 1131, 1531
BshVI ATCGAT 1 cut(s) 1025
BsiEI CGRYCG 2 cut(s) 1029, 1155
BsiHKAI GWGCWC 2 cut(s) 1248, 1519
BsiSI CCGG 2 cut(s) 156, 1269
BslFI GGGAC 1 cut(s) 696
BslI CCNNNNNNNGG 4 cut(s) 482, 1062, 1328, 1396
BsmAI GTCTC 4 cut(s) 157, 847, 960, 1267
BsmBI CGTCTC 3 cut(s) 157, 847, 1267
BsmFI GGGAC 1 cut(s) 696
BsnI GGCC 3 cut(s) 92, 1131, 1531
Bsp1286I GDGCHC 2 cut(s) 1248, 1519
Bsp143I GATC 5 cut(s) 234, 472, 1022, 1026, 1107
Bsp19I CCATGG 2 cut(s) 1033, 1360
BspACI CCGC 7 cut(s) 89, 122, 229, 250, 416, 1344, 1491
BspANI GGCC 3 cut(s) 92, 1131, 1531
BspCNI CTCAG 2 cut(s) 129, 1202
BspDI ATCGAT 1 cut(s) 1025
BspHI TCATGA 2 cut(s) 48, 1110
BspLI GGNNCC 2 cut(s) 487, 1132
BspPI GGATC 2 cut(s) 467, 1030
BspQI GCTCTTC 1 cut(s) 11
BsrBI CCGCTC 2 cut(s) 229, 252
BsrDI GCAATG 2 cut(s) 489, 548
BsrFI RCCGGY 1 cut(s) 1268
BsrI ACTGG 1 cut(s) 476
BssAI RCCGGY 1 cut(s) 1268
BssECI CCNNGG 2 cut(s) 1033, 1360
BssMI GATC 5 cut(s) 234, 472, 1022, 1026, 1107
BssSI CACGAG 1 cut(s) 313
BssT1I CCWWGG 2 cut(s) 1033, 1360
Bst2BI CACGAG 1 cut(s) 313
Bst4CI ACNGT 5 cut(s) 465, 633, 1153, 1172, 1261
Bst6I CTCTTC 1 cut(s) 11
BstC8I GCNNGC 3 cut(s) 555, 838, 985
BstDEI CTNAG 5 cut(s) 137, 882, 1189, 1466, 1533
BstDSI CCRYGG 2 cut(s) 1033, 1360
BstENI CCTNNNNNAGG 1 cut(s) 1326
BstF5I GGATG 1 cut(s) 354
BstKTI GATC 5 cut(s) 237, 475, 1025, 1029, 1110
BstMAI GTCTC 4 cut(s) 157, 847, 960, 1267
BstMBI GATC 5 cut(s) 234, 472, 1022, 1026, 1107
BstMCI CGRYCG 2 cut(s) 1029, 1155
BstMWI GCNNNNNNNGC 4 cut(s) 119, 704, 1243, 1503
BstV1I GCAGC 3 cut(s) 100, 691, 1195
BstV2I GAAGAC 1 cut(s) 1173
Bsu15I ATCGAT 1 cut(s) 1025
Bsu36I CCTNAGG 1 cut(s) 1533
BsuRI GGCC 3 cut(s) 92, 1131, 1531
BsuTUI ATCGAT 1 cut(s) 1025
BtgI CCRYGG 2 cut(s) 1033, 1360
BtsCI GGATG 1 cut(s) 354
BtsIMutI CAGTG 1 cut(s) 629
Cac8I GCNNGC 3 cut(s) 555, 838, 985
CciI TCATGA 2 cut(s) 48, 1110
Cfr10I RCCGGY 1 cut(s) 1268
Cfr13I GGNCC 1 cut(s) 1130
ClaI ATCGAT 1 cut(s) 1025
CseI GACGC 6 cut(s) 132, 251, 381, 483, 829, 1388
Csp6I GTAC 1 cut(s) 1357
CviAII CATG 5 cut(s) 49, 444, 1034, 1111, 1361
CviQI GTAC 1 cut(s) 1357
DdeI CTNAG 5 cut(s) 137, 882, 1189, 1466, 1533
DpnI GATC 5 cut(s) 236, 474, 1024, 1028, 1109
DpnII GATC 5 cut(s) 234, 472, 1022, 1026, 1107
EaeI YGGCCR 1 cut(s) 90
Eam1104I CTCTTC 1 cut(s) 11
EarI CTCTTC 1 cut(s) 11
Eco130I CCWWGG 2 cut(s) 1033, 1360
Eco147I AGGCCT 1 cut(s) 1531
Eco32I GATATC 1 cut(s) 297
Eco57I CTGAAG 3 cut(s) 359, 1259, 1496
Eco81I CCTNAGG 1 cut(s) 1533
EcoNI CCTNNNNNAGG 1 cut(s) 1326
EcoRI GAATTC 1 cut(s) 1470
EcoRV GATATC 1 cut(s) 297
EcoT14I CCWWGG 2 cut(s) 1033, 1360
ErhI CCWWGG 2 cut(s) 1033, 1360
Esp3I CGTCTC 3 cut(s) 157, 847, 1267
FaeI CATG 5 cut(s) 52, 447, 1037, 1114, 1364
FalI AAGNNNNNCTT 2 cut(s) 1232, 1264
FaqI GGGAC 1 cut(s) 696
FatI CATG 5 cut(s) 48, 443, 1033, 1110, 1360
FauI CCCGC 1 cut(s) 222
FbaI TGATCA 1 cut(s) 1107
FblI GTMKAC 2 cut(s) 288, 1155
Fnu4HI GCNGC 4 cut(s) 90, 114, 705, 1209
FokI GGATG 1 cut(s) 361
Fsp4HI GCNGC 4 cut(s) 90, 114, 705, 1209
FspBI CTAG 3 cut(s) 431, 699, 938
GluI GCNGC 4 cut(s) 90, 114, 705, 1209
GsuI CTGGAG 1 cut(s) 519
HaeIII GGCC 3 cut(s) 92, 1131, 1531
HapII CCGG 2 cut(s) 156, 1269
HgaI GACGC 6 cut(s) 132, 251, 381, 483, 829, 1388
Hin1II CATG 5 cut(s) 52, 447, 1037, 1114, 1364
HincII GTYRAC 2 cut(s) 241, 1156
HindII GTYRAC 2 cut(s) 241, 1156
HinfI GANTC 9 cut(s) 163, 278, 597, 764, 893, 931, 941, 967, 1100
HpaII CCGG 2 cut(s) 156, 1269
HphI GGTGA 5 cut(s) 139, 208, 581, 1052, 1436
Hpy166II GTNNAC 4 cut(s) 241, 289, 1156, 1221
Hpy188I TCNGA 7 cut(s) 15, 256, 412, 526, 900, 1476, 1526
Hpy188III TCNNGA 4 cut(s) 49, 1020, 1111, 1191
Hpy8I GTNNAC 4 cut(s) 241, 289, 1156, 1221
Hpy99I CGWCG 3 cut(s) 107, 547, 1382
HpyAV CCTTC 6 cut(s) 124, 157, 1234, 1390, 1471, 1521
HpyCH4III ACNGT 5 cut(s) 465, 633, 1153, 1172, 1261
HpyCH4IV ACGT 2 cut(s) 44, 685
HpyCH4V TGCA 5 cut(s) 201, 557, 629, 674, 707
HpyF10VI GCNNNNNNNGC 4 cut(s) 119, 704, 1243, 1503
HpyF3I CTNAG 5 cut(s) 137, 882, 1189, 1466, 1533
HpySE526I ACGT 2 cut(s) 44, 685
Hsp92II CATG 5 cut(s) 52, 447, 1037, 1114, 1364
Ksp22I TGATCA 1 cut(s) 1107
Kzo9I GATC 5 cut(s) 234, 472, 1022, 1026, 1107
LguI GCTCTTC 1 cut(s) 11
LmnI GCTCC 9 cut(s) 133, 257, 334, 485, 538, 733, 883, 1075, 1243
Lsp1109I GCAGC 3 cut(s) 100, 691, 1195
LweI GCATC 1 cut(s) 1417
MaeI CTAG 3 cut(s) 431, 699, 938
MaeII ACGT 2 cut(s) 44, 685
MaeIII GTNAC 2 cut(s) 465, 659
MalI GATC 5 cut(s) 236, 474, 1024, 1028, 1109
MbiI CCGCTC 2 cut(s) 229, 252
MboI GATC 5 cut(s) 234, 472, 1022, 1026, 1107
MboII GAAGA 6 cut(s) 88, 119, 352, 1178, 1243, 1411
MhlI GDGCHC 2 cut(s) 1248, 1519
MluCI AATT 8 cut(s) 31, 320, 327, 435, 448, 908, 1367, 1470
MlyI GAGTC 3 cut(s) 157, 606, 1094
MmeI TCCRAC 2 cut(s) 279, 463
MseI TTAA 7 cut(s) 305, 330, 366, 516, 774, 1502, 1540
MslI CAYNNNNRTG 1 cut(s) 1038
MspA1I CMGCKG 2 cut(s) 398, 1491
MspI CCGG 2 cut(s) 156, 1269
MwoI GCNNNNNNNGC 4 cut(s) 119, 704, 1243, 1503
NcoI CCATGG 2 cut(s) 1033, 1360
NdeII GATC 5 cut(s) 234, 472, 1022, 1026, 1107
NlaIII CATG 5 cut(s) 52, 447, 1037, 1114, 1364
NlaIV GGNNCC 2 cut(s) 487, 1132
NmuCI GTSAC 1 cut(s) 465
PagI TCATGA 2 cut(s) 48, 1110
PceI AGGCCT 1 cut(s) 1531
PciSI GCTCTTC 1 cut(s) 11
PfeI GAWTC 6 cut(s) 278, 764, 893, 931, 941, 967
PflMI CCANNNNNTGG 1 cut(s) 482
PkrI GCNGC 4 cut(s) 91, 115, 706, 1210
Ple19I CGATCG 1 cut(s) 1029
PleI GAGTC 3 cut(s) 157, 605, 1094
PpsI GAGTC 3 cut(s) 157, 605, 1094
PspN4I GGNNCC 2 cut(s) 487, 1132
PspPI GGNCC 1 cut(s) 1130
PvuI CGATCG 1 cut(s) 1029
PvuII CAGCTG 1 cut(s) 398
RsaI GTAC 1 cut(s) 1358
RsaNI GTAC 1 cut(s) 1357
RseI CAYNNNNRTG 1 cut(s) 1038
SalI GTCGAC 1 cut(s) 1154
SapI GCTCTTC 1 cut(s) 11
SaqAI TTAA 7 cut(s) 305, 330, 366, 516, 774, 1502, 1540
SatI GCNGC 4 cut(s) 90, 114, 705, 1209
Sau3AI GATC 5 cut(s) 234, 472, 1022, 1026, 1107
Sau96I GGNCC 1 cut(s) 1130
SchI GAGTC 3 cut(s) 157, 606, 1094
SduI GDGCHC 2 cut(s) 1248, 1519
SfaNI GCATC 1 cut(s) 1417
SmiMI CAYNNNNRTG 1 cut(s) 1038
SmlI CTYRAG 2 cut(s) 206, 1060
SmoI CTYRAG 2 cut(s) 206, 1060
SpeI ACTAGT 1 cut(s) 430
Sse9I AATT 8 cut(s) 31, 320, 327, 435, 448, 908, 1367, 1470
SseBI AGGCCT 1 cut(s) 1531
SsiI CCGC 7 cut(s) 89, 122, 229, 250, 416, 1344, 1491
SspI AATATT 1 cut(s) 1125
SspMI CTAG 3 cut(s) 431, 699, 938
StuI AGGCCT 1 cut(s) 1531
StyI CCWWGG 2 cut(s) 1033, 1360
TaaI ACNGT 5 cut(s) 465, 633, 1153, 1172, 1261
TaiI ACGT 2 cut(s) 47, 688
TaqI TCGA 9 cut(s) 102, 166, 276, 374, 1025, 1086, 1155, 1377, 1411
TasI AATT 8 cut(s) 31, 320, 327, 435, 448, 908, 1367, 1470
TauI GCSGC 1 cut(s) 92
TfiI GAWTC 6 cut(s) 278, 764, 893, 931, 941, 967
Tru1I TTAA 7 cut(s) 305, 330, 366, 516, 774, 1502, 1540
Tru9I TTAA 7 cut(s) 305, 330, 366, 516, 774, 1502, 1540
TscAI CASTG 1 cut(s) 636
TseFI GTSAC 1 cut(s) 465
TseI GCWGC 3 cut(s) 113, 704, 1208
Tsp45I GTSAC 1 cut(s) 465
TspDTI ATGAA 2 cut(s) 37, 365
TspRI CASTG 1 cut(s) 636
Van91I CCANNNNNTGG 1 cut(s) 482
XagI CCTNNNNNAGG 1 cut(s) 1326
XapI RAATTY 3 cut(s) 31, 1367, 1470
XmiI GTMKAC 2 cut(s) 288, 1155
XspI CTAG 3 cut(s) 431, 699, 938
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.