Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0002296

Physical Location & Seq

Genomic Coordinates Forward (+)

56710521 .. 56721095

Gene Structure 10575 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG371800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1470 bp

ATGGTGAAGGAGCTGAGGGAAAGTTATGGCTCCGGTAAGACCAGAAGCTACGAGTGGAGAGTGTCGCAACTGAAGAACATTGAGAAAATGACAGAGTATCATGAACAGGAAATCATTGAGGCTCTTCGCTCCGACCTCTCCAAACCCGAATTTGAATCCTACATTCAAGAGATAGCGCTATTGAAGAACTCGTGTACATTGGCACTTAAAGAACTCAAGTCTTGGATGAAGCCTGAAAAGGTTAAATCTTCACCAGTCATTTTTCCGTCGTCAGCCGAAATAGTGCCCGAGCCTCTTGGTGTCGTACTAGTAATTTCAGCATGGAATTATCCTTTGTTGGTGACCCTTGATCCAGTTGTCGGAGCCATTGCGGCCGGTAATGCTGTGGTTGTAAAACCGTCGGAACTTGCTCCAGCCACATCGTCATTGCTTGCGAAACTATTAGGAGACTACATGGATAACTCTTGTGTTAGAGTTGTTGAGGGGGCTGTTGCTGAAACATCTGCACTATTAGAGCAAAAGTGGGACAAAATATGTTACACAGGCAACCGAAGAGTGGGACGGATAGTGATGGCTAGCGCCGTGAAGCACCTTACACCAGTTCTTTTAGAGCTCGGAGGAAAATGTCCAGCTGTGGTTGATTCTGGCATTGACTTACAAGTCGCAAGTAGGCGGATTGTTGTAGGAAAGTGGGGGAGTAATAATGGACAGGCTTGCGTTGCACCTGATTACATGTTGACCACAAAAGATTTTGCTCCTCAGTTGGTGGAGGCCCTAAAATGTGAATTGGATAACTTTTTCGGGAAGAATCCACTTCAATCGAAAGATTTGTCTCGTATTGTTAATTCTAATCACTATGCTCGCTTGACAAAGCTCTTGGATGAGGAGGACGTTTCCGATAAGATTGTCCATGGAGGTGAAAGAGATTTAAGCAACTTGAGGATAGCTCCCACCATCTTACTGGATGTCCCACAAGACTCTCTGATCATGAATGAGGAAGTATTTGGTCCCTTGCTTCCCATTGTCACGGTTGACAAGGTGGAAGACAGTTTTGATTTGATCAAAACAGGAACAAAGCCTCTTACTGCATATTTGTTTACCAACAACAAGAAGCTGAAGGATCACTTTGTAAGGAGCATCTCTGCAGGGGGTTTAGTTATCAATGACACTATCGTACATTTTGCTGTTGCATCTTTGCCGTTTGGAGGAGTTGGGGAAAGTGGAATGGGTGCATACCATGGGAAATTCTCTTTCGAAGCTTTCAGCCATAAGAAGGCGGTTATTTATCGAGGTTTTGCCGGAGATATTTCTCTGAGGTACCCTCCATACACAATGGGTAAGTTAAGTCTTCTGAAGGCTTTGGTTAGTGGTGATAGTATTTGGGGCATAATCTGGGCCCTGGTGGTTTACAAAATCCTCAATACTTTTAAATCACTTGCTCGTATACTGAGATCTACCAAATCAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004028 GO:0004029 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0005794 GO:0005911 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009269 GO:0009414 GO:0009415 GO:0009506 GO:0009536 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0010035 GO:0012505 GO:0016020 GO:0016491 GO:0016620 GO:0016903 GO:0030054 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0055044 GO:0055114 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00010 ko00053 ko00071 ko00280 ko00310 ko00330 ko00340 ko00380 ko00410 ko00561 ko00620 ko00625 ko00903 ko00981 ko01100 ko01110 ko01120 ko01130 map00010 map00053 map00071 map00280 map00310 map00330 map00340 map00380 map00410 map00561 map00620 map00625 map00903 map00981 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

Aldedh

Protein Analysis

489

Amino Acids

53.78

Weight (kDa)

8.04

Isoelectric Point (pI)

41.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aldedh	PF00171	15 - 427	8.4e-77	Aldehyde dehydrogenase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0002296)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G44170 AT1G44170 AT1G44170
fragaria_vesca	FvH4_2g27350 FvH4_2g27350
malus_domestica	MD00G1029100.v1.1 MD15G1345700.v1.1
prunus_persica	Prupe.1G493800_v2.0.a1 Prupe.1G493800_v2.0.a1 Prupe.1G493800_v2.0.a1 Prupe.1G493800_v2.0.a1
pyrus_communis	pycom08g13760 pycom15g31000
rosa_chinensis	RchiOBHm_Chr4g0425691 RchiOBHm_Chr6g0296171 RchiOBHm_Chr6g0296191
rosa_laevigata	RLG00000007347 RLG00000011719 RLG00000011721
rosa_multiflora	Rmu_co8328491.1_g000001 Rmu_sc0028042.1_g000002 Rmu_sc0035469.1_g000002
rosa_roxburghii	Rroxscaffold_5G00367670 Rroxscaffold_7G00171760 Rroxscaffold_7G00171780 Rroxscaffold_7G00178290 Rroxscaffold_7G00178300
rosa_rugosa	Rorug04G0204900 Rorug06G0259300 Rorug06G0259400
rosa_samantha	Rh4BG268300 Rh4DG263900 Rh6AG371400 Rh6AG371500 Rh6BG379300 Rh6BG379400 Rh6CG384700 Rh6DG371800 Rh6DG371900
rosa_wichuraiana	Rw4G022650 Rw6G032360 Rw6G032370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	659
Acc65I	GGTACC	1 cut(s)	1317
AccB1I	GGYRCC	1 cut(s)	1317
AccI	GTMKAC	1 cut(s)	1444
AciI	CCGC	3 cut(s)	371, 673, 1277
AclWI	GGATC	2 cut(s)	344, 1128
AcoI	YGGCCR	1 cut(s)	372
AcsI	RAATTY	2 cut(s)	149, 1244
AcuI	CTGAAG	3 cut(s)	92, 1136, 1373
AfaI	GTAC	4 cut(s)	196, 306, 1176, 1319
AfeI	AGCGCT	1 cut(s)	177
AfiI	CCNNNNNNNGG	4 cut(s)	359, 556, 1205, 1273
AflIII	ACRYGT	1 cut(s)	732
AgsI	TTSAA	4 cut(s)	155, 167, 184, 818
AhlI	ACTAGT	1 cut(s)	307
AjnI	CCWGG	1 cut(s)	1398
AluBI	AGCT	8 cut(s)	13, 48, 613, 632, 874, 947, 1114, 1259
AluI	AGCT	8 cut(s)	13, 48, 613, 632, 874, 947, 1114, 1259
Alw21I	GWGCWC	1 cut(s)	615
Alw26I	GTCTC	2 cut(s)	441, 837
AlwI	GGATC	2 cut(s)	344, 1128
Ama87I	CYCGRG	1 cut(s)	287
Aor51HI	AGCGCT	1 cut(s)	177
AoxI	GGCC	3 cut(s)	372, 771, 1395
ApaI	GGGCCC	1 cut(s)	1399
ApoI	RAATTY	2 cut(s)	149, 1244
ArsI	GACNNNNNNTTYG	2 cut(s)	815, 847
Asp718I	GGTACC	1 cut(s)	1317
AspLEI	GCGC	2 cut(s)	178, 581
AspS9I	GGNCC	4 cut(s)	772, 1007, 1395, 1396
AsuHPI	GGTGA	5 cut(s)	16, 243, 352, 929, 1382
AsuII	TTCGAA	1 cut(s)	1254
AsuNHI	GCTAGC	1 cut(s)	575
AvaI	CYCGRG	1 cut(s)	287
AvaII	GGWCC	1 cut(s)	1007
BaeGI	GKGCMC	2 cut(s)	288, 1399
BanI	GGYRCC	1 cut(s)	1317
BanII	GRGCYC	2 cut(s)	615, 1399
BauI	CACGAG	1 cut(s)	190
BbsI	GAAGAC	2 cut(s)	1050, 1340
Bbv12I	GWGCWC	1 cut(s)	615
BbvCI	CCTCAGC	1 cut(s)	14
BccI	CCATC	2 cut(s)	565, 962
BceAI	ACGGC	2 cut(s)	566, 1183
BciT130I	CCWGG	1 cut(s)	1400
BclI	TGATCA	2 cut(s)	984, 1059
BcoDI	GTCTC	2 cut(s)	441, 837
BcuI	ACTAGT	1 cut(s)	307
BfaI	CTAG	2 cut(s)	308, 576
BfmI	CTRYAG	1 cut(s)	1143
BfoI	RGCGCY	2 cut(s)	179, 582
BglI	GCCNNNNNGGC	1 cut(s)	371
BglII	AGATCT	1 cut(s)	1451
BisI	GCNGC	1 cut(s)	372
BlsI	GCNGC	1 cut(s)	373
Bme1390I	CCNGG	1 cut(s)	1400
Bme18I	GGWCC	1 cut(s)	1007
BmeT110I	CYCGRG	1 cut(s)	287
BmgT120I	GGNCC	4 cut(s)	772, 1007, 1395, 1396
BmiI	GGNNCC	5 cut(s)	31, 364, 1009, 1319, 1397
BmrFI	CCNGG	1 cut(s)	1400
BmsI	GCATC	2 cut(s)	1146, 1199
BmtI	GCTAGC	1 cut(s)	579
BpiI	GAAGAC	2 cut(s)	1050, 1340
BplI	GAGNNNNNCTC	4 cut(s)	931, 963, 1306, 1338
BpmI	CTGGAG	1 cut(s)	396
Bpu10I	CCTNAGC	1 cut(s)	14
Bpu14I	TTCGAA	1 cut(s)	1254
BpuEI	CTTGAG	2 cut(s)	200, 958
BsaJI	CCNNGG	3 cut(s)	910, 1237, 1398
BsaWI	WCCGGW	1 cut(s)	32
Bsc4I	CCNNNNNNNGG	4 cut(s)	359, 556, 1205, 1273
Bse118I	RCCGGY	1 cut(s)	374
Bse1I	ACTGG	4 cut(s)	254, 353, 599, 966
Bse3DI	GCAATG	2 cut(s)	366, 425
BseBI	CCWGG	1 cut(s)	1400
BseDI	CCNNGG	3 cut(s)	910, 1237, 1398
BseGI	GGATG	3 cut(s)	231, 886, 970
BseLI	CCNNNNNNNGG	4 cut(s)	359, 556, 1205, 1273
BseMI	GCAATG	2 cut(s)	366, 425
BseMII	CTCAG	4 cut(s)	5, 773, 1304, 1439
BseNI	ACTGG	4 cut(s)	254, 353, 599, 966
BseRI	GAGGAG	3 cut(s)	747, 899, 1221
BseSI	GKGCMC	2 cut(s)	288, 1399
BseX3I	CGGCCG	1 cut(s)	372
BsgI	GTGCAG	1 cut(s)	489
Bsh1285I	CGRYCG	1 cut(s)	375
BshFI	GGCC	3 cut(s)	374, 773, 1397
BshNI	GGYRCC	1 cut(s)	1317
BsiEI	CGRYCG	1 cut(s)	375
BsiHKAI	GWGCWC	1 cut(s)	615
BsiHKCI	CYCGRG	1 cut(s)	287
BsiSI	CCGG	3 cut(s)	33, 375, 1299
BslFI	GGGAC	4 cut(s)	539, 573, 953, 993
BslI	CCNNNNNNNGG	4 cut(s)	359, 556, 1205, 1273
BsmAI	GTCTC	2 cut(s)	441, 837
BsmFI	GGGAC	4 cut(s)	539, 573, 953, 993
BsnI	GGCC	3 cut(s)	374, 773, 1397
BsoBI	CYCGRG	1 cut(s)	287
Bsp119I	TTCGAA	1 cut(s)	1254
Bsp120I	GGGCCC	1 cut(s)	1395
Bsp1286I	GDGCHC	3 cut(s)	288, 615, 1399
Bsp1407I	TGTACA	1 cut(s)	194
Bsp143I	GATC	5 cut(s)	349, 984, 1059, 1120, 1451
Bsp19I	CCATGG	2 cut(s)	910, 1237
BspACI	CCGC	3 cut(s)	371, 673, 1277
BspANI	GGCC	3 cut(s)	374, 773, 1397
BspCNI	CTCAG	4 cut(s)	6, 772, 1305, 1440
BspHI	TCATGA	2 cut(s)	100, 987
BspLI	GGNNCC	5 cut(s)	31, 364, 1009, 1319, 1397
BspMAI	CTGCAG	1 cut(s)	1147
BspOI	GCTAGC	1 cut(s)	579
BspPI	GGATC	2 cut(s)	344, 1128
BspQI	GCTCTTC	1 cut(s)	129
BspT104I	TTCGAA	1 cut(s)	1254
BspT107I	GGYRCC	1 cut(s)	1317
BsrDI	GCAATG	2 cut(s)	366, 425
BsrFI	RCCGGY	1 cut(s)	374
BsrGI	TGTACA	1 cut(s)	194
BsrI	ACTGG	4 cut(s)	254, 353, 599, 966
BssAI	RCCGGY	1 cut(s)	374
BssECI	CCNNGG	3 cut(s)	910, 1237, 1398
BssMI	GATC	5 cut(s)	349, 984, 1059, 1120, 1451
BssNAI	GTATAC	1 cut(s)	1445
BssSI	CACGAG	1 cut(s)	190
BssT1I	CCWWGG	2 cut(s)	910, 1237
Bst1107I	GTATAC	1 cut(s)	1445
Bst2BI	CACGAG	1 cut(s)	190
Bst2UI	CCWGG	1 cut(s)	1400
Bst4CI	ACNGT	3 cut(s)	399, 1030, 1049
Bst6I	CTCTTC	2 cut(s)	129, 547
BstAUI	TGTACA	1 cut(s)	194
BstBI	TTCGAA	1 cut(s)	1254
BstC8I	GCNNGC	4 cut(s)	432, 577, 715, 862
BstDEI	CTNAG	4 cut(s)	14, 759, 1313, 1448
BstDSI	CCRYGG	2 cut(s)	910, 1237
BstEII	GGTNACC	1 cut(s)	340
BstF5I	GGATG	3 cut(s)	231, 886, 970
BstH2I	RGCGCY	2 cut(s)	179, 582
BstHHI	GCGC	2 cut(s)	178, 581
BstKTI	GATC	5 cut(s)	352, 987, 1062, 1123, 1454
BstMAI	GTCTC	2 cut(s)	441, 837
BstMBI	GATC	5 cut(s)	349, 984, 1059, 1120, 1451
BstMCI	CGRYCG	1 cut(s)	375
BstMWI	GCNNNNNNNGC	3 cut(s)	371, 380, 719
BstNI	CCWGG	1 cut(s)	1400
BstNSI	RCATGY	1 cut(s)	736
BstPI	GGTNACC	1 cut(s)	340
BstSCI	CCNGG	1 cut(s)	1398
BstSFI	CTRYAG	1 cut(s)	1143
BstSLI	GKGCMC	2 cut(s)	288, 1399
BstV2I	GAAGAC	2 cut(s)	1050, 1340
BstX2I	RGATCY	1 cut(s)	1451
BstXI	CCANNNNNNTGG	1 cut(s)	961
BstYI	RGATCY	1 cut(s)	1451
BstZ17I	GTATAC	1 cut(s)	1445
BstZI	CGGCCG	1 cut(s)	372
BsuRI	GGCC	3 cut(s)	374, 773, 1397
BtgI	CCRYGG	2 cut(s)	910, 1237
BtsCI	GGATG	3 cut(s)	231, 886, 970
Cac8I	GCNNGC	4 cut(s)	432, 577, 715, 862
CciI	TCATGA	2 cut(s)	100, 987
CfoI	GCGC	2 cut(s)	178, 581
Cfr10I	RCCGGY	1 cut(s)	374
Cfr13I	GGNCC	4 cut(s)	772, 1007, 1395, 1396
Csp6I	GTAC	4 cut(s)	195, 305, 1175, 1318
CviAII	CATG	7 cut(s)	101, 321, 454, 733, 911, 988, 1238
CviQI	GTAC	4 cut(s)	195, 305, 1175, 1318
DdeI	CTNAG	4 cut(s)	14, 759, 1313, 1448
DpnI	GATC	5 cut(s)	351, 986, 1061, 1122, 1453
DpnII	GATC	5 cut(s)	349, 984, 1059, 1120, 1451
DraI	TTTAAA	1 cut(s)	1429
DrdI	GACNNNNNNGTC	1 cut(s)	659
DseDI	GACNNNNNNGTC	1 cut(s)	659
EaeI	YGGCCR	1 cut(s)	372
EagI	CGGCCG	1 cut(s)	372
Eam1104I	CTCTTC	2 cut(s)	129, 547
EarI	CTCTTC	2 cut(s)	129, 547
EciI	GGCGGA	1 cut(s)	688
Ecl136II	GAGCTC	1 cut(s)	613
EclXI	CGGCCG	1 cut(s)	372
Eco130I	CCWWGG	2 cut(s)	910, 1237
Eco24I	GRGCYC	2 cut(s)	615, 1399
Eco47I	GGWCC	1 cut(s)	1007
Eco47III	AGCGCT	1 cut(s)	177
Eco52I	CGGCCG	1 cut(s)	372
Eco53kI	GAGCTC	1 cut(s)	613
Eco57I	CTGAAG	3 cut(s)	92, 1136, 1373
Eco88I	CYCGRG	1 cut(s)	287
Eco91I	GGTNACC	1 cut(s)	340
EcoICRI	GAGCTC	1 cut(s)	613
EcoO109I	RGGNCCY	2 cut(s)	772, 1396
EcoO65I	GGTNACC	1 cut(s)	340
EcoRII	CCWGG	1 cut(s)	1398
EcoT14I	CCWWGG	2 cut(s)	910, 1237
EcoT38I	GRGCYC	2 cut(s)	615, 1399
ErhI	CCWWGG	2 cut(s)	910, 1237
FaeI	CATG	7 cut(s)	104, 324, 457, 736, 914, 991, 1241
FalI	AAGNNNNNCTT	2 cut(s)	1109, 1141
FaqI	GGGAC	4 cut(s)	539, 573, 953, 993
FatI	CATG	7 cut(s)	100, 320, 453, 732, 910, 987, 1237
FbaI	TGATCA	2 cut(s)	984, 1059
FblI	GTMKAC	1 cut(s)	1444
Fnu4HI	GCNGC	1 cut(s)	372
FokI	GGATG	3 cut(s)	238, 893, 977
FriOI	GRGCYC	2 cut(s)	615, 1399
Fsp4HI	GCNGC	1 cut(s)	372
FspBI	CTAG	2 cut(s)	308, 576
GlaI	GCGC	2 cut(s)	177, 580
GluI	GCNGC	1 cut(s)	372
GsuI	CTGGAG	1 cut(s)	396
HaeII	RGCGCY	2 cut(s)	179, 582
HaeIII	GGCC	3 cut(s)	374, 773, 1397
HapII	CCGG	3 cut(s)	33, 375, 1299
HhaI	GCGC	2 cut(s)	178, 581
Hin1II	CATG	7 cut(s)	104, 324, 457, 736, 914, 991, 1241
Hin6I	GCGC	2 cut(s)	176, 579
HinP1I	GCGC	2 cut(s)	176, 579
HincII	GTYRAC	2 cut(s)	738, 1033
HindII	GTYRAC	2 cut(s)	738, 1033
HindIII	AAGCTT	1 cut(s)	1257
HinfI	GANTC	4 cut(s)	155, 641, 808, 977
HpaII	CCGG	3 cut(s)	33, 375, 1299
HphI	GGTGA	5 cut(s)	16, 243, 352, 929, 1382
Hpy166II	GTNNAC	6 cut(s)	195, 738, 1033, 1098, 1408, 1445
Hpy188I	TCNGA	9 cut(s)	133, 362, 403, 617, 898, 984, 1314, 1353, 1465
Hpy188III	TCNNGA	4 cut(s)	101, 167, 802, 988
Hpy8I	GTNNAC	6 cut(s)	195, 738, 1033, 1098, 1408, 1445
Hpy99I	CGWCG	2 cut(s)	271, 403
HpyAV	CCTTC	3 cut(s)	1111, 1267, 1348
HpyCH4III	ACNGT	3 cut(s)	399, 1030, 1049
HpyCH4IV	ACGT	1 cut(s)	891
HpyCH4V	TGCA	6 cut(s)	506, 722, 1088, 1145, 1190, 1232
HpyF10VI	GCNNNNNNNGC	3 cut(s)	371, 380, 719
HpyF3I	CTNAG	4 cut(s)	14, 759, 1313, 1448
HpySE526I	ACGT	1 cut(s)	891
Hsp92II	CATG	7 cut(s)	104, 324, 457, 736, 914, 991, 1241
HspAI	GCGC	2 cut(s)	176, 579
KpnI	GGTACC	1 cut(s)	1321
Ksp22I	TGATCA	2 cut(s)	984, 1059
Kzo9I	GATC	5 cut(s)	349, 984, 1059, 1120, 1451
LguI	GCTCTTC	1 cut(s)	129
LmnI	GCTCC	8 cut(s)	10, 35, 134, 362, 415, 760, 952, 1134
LweI	GCATC	2 cut(s)	1146, 1199
MaeI	CTAG	2 cut(s)	308, 576
MaeII	ACGT	1 cut(s)	891
MaeIII	GTNAC	3 cut(s)	340, 536, 1024
MalI	GATC	5 cut(s)	351, 986, 1061, 1122, 1453
MboI	GATC	5 cut(s)	349, 984, 1059, 1120, 1451
MboII	GAAGA	8 cut(s)	85, 116, 196, 240, 564, 817, 1055, 1340
MflI	RGATCY	1 cut(s)	1451
MhlI	GDGCHC	3 cut(s)	288, 615, 1399
MluCI	AATT	6 cut(s)	149, 312, 325, 785, 844, 1244
MlyI	GAGTC	1 cut(s)	971
MmeI	TCCRAC	3 cut(s)	156, 340, 381
MseI	TTAA	6 cut(s)	207, 243, 843, 929, 1343, 1428
MslI	CAYNNNNRTG	1 cut(s)	915
MspA1I	CMGCKG	1 cut(s)	632
MspI	CCGG	3 cut(s)	33, 375, 1299
MspR9I	CCNGG	1 cut(s)	1400
MvaI	CCWGG	1 cut(s)	1400
MwoI	GCNNNNNNNGC	3 cut(s)	371, 380, 719
NcoI	CCATGG	2 cut(s)	910, 1237
NdeII	GATC	5 cut(s)	349, 984, 1059, 1120, 1451
NheI	GCTAGC	1 cut(s)	575
NlaIII	CATG	7 cut(s)	104, 324, 457, 736, 914, 991, 1241
NlaIV	GGNNCC	5 cut(s)	31, 364, 1009, 1319, 1397
NmuCI	GTSAC	2 cut(s)	340, 1024
NspI	RCATGY	1 cut(s)	736
NspV	TTCGAA	1 cut(s)	1254
PagI	TCATGA	2 cut(s)	100, 987
PciI	ACATGT	1 cut(s)	732
PciSI	GCTCTTC	1 cut(s)	129
PfeI	GAWTC	3 cut(s)	155, 641, 808
PkrI	GCNGC	1 cut(s)	373
PleI	GAGTC	1 cut(s)	971
PpsI	GAGTC	1 cut(s)	971
PscI	ACATGT	1 cut(s)	732
Psp124BI	GAGCTC	1 cut(s)	615
Psp6I	CCWGG	1 cut(s)	1398
PspEI	GGTNACC	1 cut(s)	340
PspGI	CCWGG	1 cut(s)	1398
PspN4I	GGNNCC	5 cut(s)	31, 364, 1009, 1319, 1397
PspOMI	GGGCCC	1 cut(s)	1395
PspPI	GGNCC	4 cut(s)	772, 1007, 1395, 1396
PstI	CTGCAG	1 cut(s)	1147
PsuI	RGATCY	1 cut(s)	1451
PvuII	CAGCTG	1 cut(s)	632
RsaI	GTAC	4 cut(s)	196, 306, 1176, 1319
RsaNI	GTAC	4 cut(s)	195, 305, 1175, 1318
RseI	CAYNNNNRTG	1 cut(s)	915
SacI	GAGCTC	1 cut(s)	615
SapI	GCTCTTC	1 cut(s)	129
SaqAI	TTAA	6 cut(s)	207, 243, 843, 929, 1343, 1428
SatI	GCNGC	1 cut(s)	372
Sau3AI	GATC	5 cut(s)	349, 984, 1059, 1120, 1451
Sau96I	GGNCC	4 cut(s)	772, 1007, 1395, 1396
SchI	GAGTC	1 cut(s)	971
ScrFI	CCNGG	1 cut(s)	1400
SduI	GDGCHC	3 cut(s)	288, 615, 1399
SfaNI	GCATC	2 cut(s)	1146, 1199
SfcI	CTRYAG	1 cut(s)	1143
SfuI	TTCGAA	1 cut(s)	1254
SinI	GGWCC	1 cut(s)	1007
SmiMI	CAYNNNNRTG	1 cut(s)	915
SmlI	CTYRAG	2 cut(s)	215, 937
SmoI	CTYRAG	2 cut(s)	215, 937
SpeI	ACTAGT	1 cut(s)	307
Sse9I	AATT	6 cut(s)	149, 312, 325, 785, 844, 1244
SsiI	CCGC	3 cut(s)	371, 673, 1277
SspMI	CTAG	2 cut(s)	308, 576
SstI	GAGCTC	1 cut(s)	615
StyD4I	CCNGG	1 cut(s)	1398
StyI	CCWWGG	2 cut(s)	910, 1237
TaaI	ACNGT	3 cut(s)	399, 1030, 1049
TaiI	ACGT	1 cut(s)	894
TaqI	TCGA	3 cut(s)	821, 1254, 1288
TasI	AATT	6 cut(s)	149, 312, 325, 785, 844, 1244
TatI	WGTACW	1 cut(s)	194
TauI	GCSGC	1 cut(s)	374
TfiI	GAWTC	3 cut(s)	155, 641, 808
Tru1I	TTAA	6 cut(s)	207, 243, 843, 929, 1343, 1428
Tru9I	TTAA	6 cut(s)	207, 243, 843, 929, 1343, 1428
TseFI	GTSAC	2 cut(s)	340, 1024
Tsp45I	GTSAC	2 cut(s)	340, 1024
TspDTI	ATGAA	3 cut(s)	117, 242, 1004
TspGWI	ACGGA	2 cut(s)	255, 577
VpaK11BI	GGWCC	1 cut(s)	1007
XapI	RAATTY	2 cut(s)	149, 1244
XceI	RCATGY	1 cut(s)	736
XcmI	CCANNNNNNNNNTGG	1 cut(s)	958
XmiI	GTMKAC	1 cut(s)	1444
XspI	CTAG	2 cut(s)	308, 576

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.