Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003223

Physical Location & Seq

Genomic Coordinates Forward (+)

22423894 .. 22428053

Gene Structure 4160 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G60900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGATGAGTTACGAAGGCAACGGAGATGGTGTCGCTATCTCCACCGAAAACCACAACGAGAACTACATATCTCTAGAGAGCTCGCCTTTTCATGAAGACTCCAAGTCTCGAGAATCTCATGATCTTAAAAAGGATTCTTCGAAAATCAGTGAGAAAGACAATGAAAATGGACGTGATAAAGACGGAAACAAAGATCGTGATCGTGAGAAGGATCGTGATAGGGAGAAGAGCAGAGACAGAGATAGGGAGAAAAGCAGAGATAGAGATAGGGATAGGGAGAGAAGTAAGGATAGGCAACGAGACCGTCATCATAGAGATCGTCATAGGGACCGTAGCAGAGAACGTAGTGAGAAAAGAGATGATTTGGATGATGATCATCATCGCAGAAGTCGAGACCGTGATAGGAGGAGGTCTCGCGATCGAGACAGAGAGGTGAGACACAGGCGACGGTCACGCTCTCGGTCAAGGAGCCGCTCTGAACGTAGGTCAAGGTCAGAACATAGACATAAGTCTGAACATAGATCACGCTCACGGTCGCGATCAAGGTCAAAGAGCAAGAGGAGAAGTGGATTTGATATGGCGCCTCCTGATATGTTAGCTGCTACTGCTGTTGCTGCAGCAGGCCAGGTTCCTAGTGTGCCAACTACTGCTACTATTCCAGGGATGTTCTCAAACATGTTTCCAATGGTCCCTGGTCAGCAACTAGGTGCGCTTCCTGTACTGCCAGTTCAGGCAATGACTCAACAGGCAACTAGGCATGCTCGGCGAGTCTATGTTGGTGGCCTTCCACCAACTGCTAATGAACAGTCGGTGTCAACGTTCTTTAGCCAAGTGATGTCGGCCATTGGGGGAAACACTGCTGGGCCAGGTGATGCGGTGGTCAATGTTTATATAAACCACGAAAAGAAGTTTGCTTTTGTAGAGATGAGATCTGTTGAGGAGGCTAGTAACGCAATGGCATTAGACGGCATTATATTAGAGGGAGTTCCTGTAAAGGTGAGGAGGCCAACTGACTATAACCCGTCTCTTGCTGCAACTCTTGGTCCGAGCCAGCCTAATCCCAACCTCAACTTAGGGGCTGTTGGATTGTCTTCAGGGTCTACTGGTGGGCTTGAGGGTCCCGACCGCATTTTTGTGGGCGGACTTCCCTATTACTTCACAGAGGTACAGATCAGGGAGCTCTTGGAGTCTTTTGGGCCCCTAAGAGGTTTCAACTTGGTCAAAGACAGGGAGACTGGAAATTCGAAGGGATATGCATTCTGTGTTTACCAAGATCCGTCAGTAACAGATATTGCATGTGCCGCTCTAAACGGGATTAAGATGGGTGATAAGACACTTACAGTTAGGCGTGCAATCCAGGGTGCAATTCAACCTAAACCCGAGCAAGAAGAAGTCTTACTTTATGCCCAACAACAGATTGCTTTGCAGAGGCTTATGTTCCAACCAGGAGGTACTCCCACCAAGATTGTCTGTTTGACTCAAGTGGTTACAGCTGATGATCTTAGAGACGATGAAGAATATGCAGAGATAATGGAGGACATGCGACAAGAAGGTGGAAAATTCGGTAACTTAGTGAATGTTGTGATTCCGAGGCCTAATCCAGATCATGACCCAACACCAGGAGTTGGGAAGGTTTTCTTAGAGTATGCGGATGTGGATGGCTCATCAAAGGCCAGATCGGGGATGAATGGAAGAAAATTTGGAGGAAACCAAGTAGTGGCTGTGTATTACCCCGAAGACAAGTATGCCCAAGGCGACTACGAAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000243 GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008187 GO:0008380 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0030628 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0036002 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0050896 GO:0051704 GO:0051707 GO:0070013 GO:0071004 GO:0071010 GO:0071704 GO:0089701 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1

Protein Analysis

589

Amino Acids

66.31

Weight (kDa)

9.19

Isoelectric Point (pI)

63.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	377 - 446	3.5e-17	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003223)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60900 AT4G36690 AT4G36690 AT4G36690 AT4G36690
fragaria_vesca	FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g18180
malus_domestica	MD02G1151300.v1.1 MD15G1265800.v1.1
prunus_persica	Prupe.7G151700_v2.0.a1 Prupe.7G151700_v2.0.a1 Prupe.7G151700_v2.0.a1
pyrus_communis	pycom15g23150
rosa_chinensis	RchiOBHm_Chr2g0102011 RchiOBHm_Chr7g0198161
rosa_laevigata	RLG00000017126
rosa_multiflora	Rmu_co8319619.1_g000001 Rmu_sc0000157.1_g000005 Rmu_sc0001167.1_g000028
rosa_roxburghii	Rroxscaffold_2G00140830
rosa_rugosa	Rorug02G0103800 Rorug02G0103900 Rorug02G0104000
rosa_samantha	Rh2AG152000 Rh2BG157400 Rh2CG157400 Rh2DG157500
rosa_wichuraiana	Rw0G008320 Rw2G011870 Rw4G020950 Rw5G047310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	580
AccB7I	CCANNNNNTGG	2 cut(s)	1625, 1717
AccBSI	CCGCTC	2 cut(s)	474, 1304
AccI	GTMKAC	1 cut(s)	1100
AccII	CGCG	2 cut(s)	417, 538
AciI	CCGC	6 cut(s)	472, 875, 1126, 1140, 1302, 1649
AclI	AACGTT	1 cut(s)	818
AclWI	GGATC	2 cut(s)	219, 1268
AcoI	YGGCCR	1 cut(s)	840
AcsI	RAATTY	3 cut(s)	1240, 1559, 1697
AcuI	CTGAAG	1 cut(s)	1077
AcyI	GRCGYC	1 cut(s)	581
AfaI	GTAC	3 cut(s)	720, 1167, 1453
AfiI	CCNNNNNNNGG	5 cut(s)	1205, 1619, 1625, 1680, 1717
AflIII	ACRYGT	1 cut(s)	675
AgsI	TTSAA	2 cut(s)	1213, 1370
AhdI	GACNNNNNGTC	1 cut(s)	103
AjiI	CACGTC	1 cut(s)	173
AjnI	CCWGG	7 cut(s)	624, 658, 691, 865, 1356, 1444, 1618
AluBI	AGCT	4 cut(s)	81, 599, 1180, 1493
AluI	AGCT	4 cut(s)	81, 599, 1180, 1493
Alw21I	GWGCWC	2 cut(s)	83, 1182
AlwI	GGATC	2 cut(s)	219, 1268
Ama87I	CYCGRG	2 cut(s)	108, 1379
AoxI	GGCC	8 cut(s)	622, 781, 840, 863, 1004, 1196, 1592, 1671
ApaI	GGGCCC	1 cut(s)	1200
ApeKI	GCWGC	4 cut(s)	599, 614, 617, 1031
ApoI	RAATTY	3 cut(s)	1240, 1559, 1697
ArsI	GACNNNNNNTTYG	4 cut(s)	1115, 1147, 1225, 1257
Asp700I	GAANNNNTTC	1 cut(s)	1634
AspLEI	GCGC	2 cut(s)	583, 712
AspS9I	GGNCC	7 cut(s)	328, 688, 863, 1043, 1118, 1196, 1197
AsuHPI	GGTGA	4 cut(s)	445, 881, 1009, 1337
AsuII	TTCGAA	2 cut(s)	140, 1244
AvaI	CYCGRG	2 cut(s)	108, 1379
AvaII	GGWCC	4 cut(s)	328, 688, 1043, 1118
BaeGI	GKGCMC	1 cut(s)	1200
BanI	GGYRCC	1 cut(s)	580
BanII	GRGCYC	3 cut(s)	83, 1182, 1200
BarI	GAAGNNNNNNTAC	2 cut(s)	1380, 1412
BbsI	GAAGAC	3 cut(s)	102, 1083, 1743
Bbv12I	GWGCWC	2 cut(s)	83, 1182
BbvI	GCAGC	4 cut(s)	586, 601, 629, 1018
BccI	CCATC	3 cut(s)	20, 1315, 1652
BceAI	ACGGC	1 cut(s)	982
BciT130I	CCWGG	7 cut(s)	626, 660, 693, 867, 1358, 1446, 1620
BclI	TGATCA	1 cut(s)	373
BfaI	CTAG	5 cut(s)	74, 633, 704, 753, 945
BfmI	CTRYAG	1 cut(s)	615
BfoI	RGCGCY	1 cut(s)	584
BglII	AGATCT	1 cut(s)	929
BisI	GCNGC	6 cut(s)	472, 600, 615, 618, 1032, 1302
BlsI	GCNGC	6 cut(s)	473, 601, 616, 619, 1033, 1303
Bme1390I	CCNGG	7 cut(s)	626, 660, 693, 867, 1358, 1446, 1620
Bme18I	GGWCC	4 cut(s)	328, 688, 1043, 1118
BmeRI	GACNNNNNGTC	1 cut(s)	103
BmeT110I	CYCGRG	2 cut(s)	108, 1379
BmgBI	CACGTC	1 cut(s)	173
BmgT120I	GGNCC	7 cut(s)	328, 688, 863, 1043, 1118, 1196, 1197
BmiI	GGNNCC	9 cut(s)	329, 470, 582, 630, 690, 1119, 1120, 1198, 1199
BmrFI	CCNGG	7 cut(s)	626, 660, 693, 867, 1358, 1446, 1620
BmsI	GCATC	1 cut(s)	862
BoxI	GACNNNNGTC	1 cut(s)	508
BpiI	GAAGAC	3 cut(s)	102, 1083, 1743
BplI	GAGNNNNNCTC	2 cut(s)	397, 429
Bpu14I	TTCGAA	2 cut(s)	140, 1244
BpuEI	CTTGAG	2 cut(s)	1133, 1464
BsaBI	GATNNNNATC	4 cut(s)	198, 372, 375, 378
BsaHI	GRCGYC	1 cut(s)	581
BsaI	GGTCTC	3 cut(s)	294, 387, 417
BsaJI	CCNNGG	5 cut(s)	659, 691, 1357, 1589, 1750
BsaXI	ACNNNNNCTCC	4 cut(s)	15, 45, 975, 1005
Bsc4I	CCNNNNNNNGG	5 cut(s)	1205, 1619, 1625, 1680, 1717
Bse1I	ACTGG	3 cut(s)	725, 1108, 1240
Bse3DI	GCAATG	2 cut(s)	741, 960
Bse8I	GATNNNNATC	4 cut(s)	198, 372, 375, 378
BseBI	CCWGG	7 cut(s)	626, 660, 693, 867, 1358, 1446, 1620
BseDI	CCNNGG	5 cut(s)	659, 691, 1357, 1589, 1750
BseGI	GGATG	5 cut(s)	373, 669, 1657, 1663, 1689
BseJI	GATNNNNATC	4 cut(s)	198, 372, 375, 378
BseLI	CCNNNNNNNGG	5 cut(s)	1205, 1619, 1625, 1680, 1717
BseMI	GCAATG	2 cut(s)	741, 960
BseNI	ACTGG	3 cut(s)	725, 1108, 1240
BseRI	GAGGAG	4 cut(s)	421, 574, 953, 1015
BseSI	GKGCMC	1 cut(s)	1200
BseXI	GCAGC	4 cut(s)	586, 601, 629, 1018
BseYI	CCCAGC	1 cut(s)	860
Bsh1236I	CGCG	2 cut(s)	417, 538
Bsh1285I	CGRYCG	3 cut(s)	421, 536, 1126
BshFI	GGCC	8 cut(s)	624, 783, 842, 865, 1006, 1198, 1594, 1673
BshNI	GGYRCC	1 cut(s)	580
BsiEI	CGRYCG	3 cut(s)	421, 536, 1126
BsiHKAI	GWGCWC	2 cut(s)	83, 1182
BsiHKCI	CYCGRG	2 cut(s)	108, 1379
BslFI	GGGAC	3 cut(s)	341, 674, 1104
BslI	CCNNNNNNNGG	5 cut(s)	1205, 1619, 1625, 1680, 1717
BsmBI	CGTCTC	2 cut(s)	1029, 1500
BsmFI	GGGAC	3 cut(s)	341, 674, 1104
BsmI	GAATGC	1 cut(s)	1256
BsnI	GGCC	8 cut(s)	624, 783, 842, 865, 1006, 1198, 1594, 1673
Bso31I	GGTCTC	3 cut(s)	294, 387, 417
BsoBI	CYCGRG	2 cut(s)	108, 1379
Bsp119I	TTCGAA	2 cut(s)	140, 1244
Bsp120I	GGGCCC	1 cut(s)	1196
Bsp1286I	GDGCHC	3 cut(s)	83, 1182, 1200
Bsp68I	TCGCGA	2 cut(s)	417, 538
BspACI	CCGC	6 cut(s)	472, 875, 1126, 1140, 1302, 1649
BspANI	GGCC	8 cut(s)	624, 783, 842, 865, 1006, 1198, 1594, 1673
BspFNI	CGCG	2 cut(s)	417, 538
BspHI	TCATGA	3 cut(s)	91, 118, 1606
BspLI	GGNNCC	9 cut(s)	329, 470, 582, 630, 690, 1119, 1120, 1198, 1199
BspMAI	CTGCAG	1 cut(s)	619
BspPI	GGATC	2 cut(s)	219, 1268
BspQI	GCTCTTC	1 cut(s)	221
BspT104I	TTCGAA	2 cut(s)	140, 1244
BspT107I	GGYRCC	1 cut(s)	580
BspTNI	GGTCTC	3 cut(s)	294, 387, 417
BsrBI	CCGCTC	2 cut(s)	474, 1304
BsrDI	GCAATG	2 cut(s)	741, 960
BsrI	ACTGG	3 cut(s)	725, 1108, 1240
BssECI	CCNNGG	5 cut(s)	659, 691, 1357, 1589, 1750
BssNI	GRCGYC	1 cut(s)	581
BssT1I	CCWWGG	1 cut(s)	1750
Bst2UI	CCWGG	7 cut(s)	626, 660, 693, 867, 1358, 1446, 1620
Bst4CI	ACNGT	7 cut(s)	305, 332, 398, 450, 534, 807, 1342
Bst6I	CTCTTC	1 cut(s)	221
BstACI	GRCGYC	1 cut(s)	581
BstBI	TTCGAA	2 cut(s)	140, 1244
BstC8I	GCNNGC	5 cut(s)	83, 622, 759, 1052, 1350
BstDEI	CTNAG	5 cut(s)	1072, 1202, 1502, 1570, 1639
BstF5I	GGATG	5 cut(s)	373, 669, 1657, 1663, 1689
BstFNI	CGCG	2 cut(s)	417, 538
BstH2I	RGCGCY	1 cut(s)	584
BstHHI	GCGC	2 cut(s)	583, 712
BstMCI	CGRYCG	3 cut(s)	421, 536, 1126
BstMWI	GCNNNNNNNGC	5 cut(s)	605, 614, 763, 950, 1301
BstNI	CCWGG	7 cut(s)	626, 660, 693, 867, 1358, 1446, 1620
BstNSI	RCATGY	4 cut(s)	679, 761, 1299, 1543
BstPAI	GACNNNNGTC	1 cut(s)	508
BstSCI	CCNGG	7 cut(s)	624, 658, 691, 865, 1356, 1444, 1618
BstSFI	CTRYAG	1 cut(s)	615
BstSLI	GKGCMC	1 cut(s)	1200
BstUI	CGCG	2 cut(s)	417, 538
BstV1I	GCAGC	4 cut(s)	586, 601, 629, 1018
BstV2I	GAAGAC	3 cut(s)	102, 1083, 1743
BstX2I	RGATCY	2 cut(s)	929, 1273
BstYI	RGATCY	2 cut(s)	929, 1273
BsuRI	GGCC	8 cut(s)	624, 783, 842, 865, 1006, 1198, 1594, 1673
BtgZI	GCGATG	1 cut(s)	365
BtrI	CACGTC	1 cut(s)	173
BtsCI	GGATG	5 cut(s)	373, 669, 1657, 1663, 1689
BtsI	GCAGTG	1 cut(s)	855
BtsIMutI	CAGTG	2 cut(s)	154, 855
BtuMI	TCGCGA	2 cut(s)	417, 538
Cac8I	GCNNGC	5 cut(s)	83, 622, 759, 1052, 1350
CciI	TCATGA	3 cut(s)	91, 118, 1606
CfoI	GCGC	2 cut(s)	583, 712
Cfr13I	GGNCC	7 cut(s)	328, 688, 863, 1043, 1118, 1196, 1197
Csp6I	GTAC	3 cut(s)	719, 1166, 1452
CspCI	CAANNNNNGTGG	2 cut(s)	1447, 1482
CviAII	CATG	7 cut(s)	92, 119, 676, 758, 1296, 1540, 1607
CviQI	GTAC	3 cut(s)	719, 1166, 1452
DdeI	CTNAG	5 cut(s)	1072, 1202, 1502, 1570, 1639
DinI	GGCGCC	1 cut(s)	582
DriI	GACNNNNNGTC	1 cut(s)	103
EaeI	YGGCCR	1 cut(s)	840
Eam1104I	CTCTTC	1 cut(s)	221
Eam1105I	GACNNNNNGTC	1 cut(s)	103
EarI	CTCTTC	1 cut(s)	221
EciI	GGCGGA	1 cut(s)	1155
Ecl136II	GAGCTC	2 cut(s)	81, 1180
Eco130I	CCWWGG	1 cut(s)	1750
Eco147I	AGGCCT	1 cut(s)	1594
Eco24I	GRGCYC	3 cut(s)	83, 1182, 1200
Eco31I	GGTCTC	3 cut(s)	294, 387, 417
Eco47I	GGWCC	4 cut(s)	328, 688, 1043, 1118
Eco53kI	GAGCTC	2 cut(s)	81, 1180
Eco57I	CTGAAG	1 cut(s)	1077
Eco88I	CYCGRG	2 cut(s)	108, 1379
EcoICRI	GAGCTC	2 cut(s)	81, 1180
EcoO109I	RGGNCCY	2 cut(s)	1118, 1197
EcoRII	CCWGG	7 cut(s)	624, 658, 691, 865, 1356, 1444, 1618
EcoT14I	CCWWGG	1 cut(s)	1750
EcoT22I	ATGCAT	1 cut(s)	1258
EcoT38I	GRGCYC	3 cut(s)	83, 1182, 1200
EgeI	GGCGCC	1 cut(s)	582
EheI	GGCGCC	1 cut(s)	582
ErhI	CCWWGG	1 cut(s)	1750
Esp3I	CGTCTC	2 cut(s)	1029, 1500
FaeI	CATG	7 cut(s)	95, 122, 679, 761, 1299, 1543, 1610
FalI	AAGNNNNNCTT	4 cut(s)	1383, 1415, 1622, 1654
FaqI	GGGAC	3 cut(s)	341, 674, 1104
FatI	CATG	7 cut(s)	91, 118, 675, 757, 1295, 1539, 1606
FbaI	TGATCA	1 cut(s)	373
FblI	GTMKAC	1 cut(s)	1100
Fnu4HI	GCNGC	6 cut(s)	472, 600, 615, 618, 1032, 1302
FokI	GGATG	5 cut(s)	380, 676, 1664, 1670, 1696
FriOI	GRGCYC	3 cut(s)	83, 1182, 1200
Fsp4HI	GCNGC	6 cut(s)	472, 600, 615, 618, 1032, 1302
FspBI	CTAG	5 cut(s)	74, 633, 704, 753, 945
GlaI	GCGC	2 cut(s)	582, 711
GluI	GCNGC	6 cut(s)	472, 600, 615, 618, 1032, 1302
GsaI	CCCAGC	1 cut(s)	864
HaeII	RGCGCY	1 cut(s)	584
HaeIII	GGCC	8 cut(s)	624, 783, 842, 865, 1006, 1198, 1594, 1673
HhaI	GCGC	2 cut(s)	583, 712
Hin1I	GRCGYC	1 cut(s)	581
Hin1II	CATG	7 cut(s)	95, 122, 679, 761, 1299, 1543, 1610
Hin6I	GCGC	2 cut(s)	581, 710
HinP1I	GCGC	2 cut(s)	581, 710
HincII	GTYRAC	1 cut(s)	816
HindII	GTYRAC	1 cut(s)	816
HinfI	GANTC	8 cut(s)	98, 113, 134, 739, 768, 1187, 1477, 1585
HphI	GGTGA	4 cut(s)	445, 881, 1009, 1337
Hpy166II	GTNNAC	3 cut(s)	816, 1101, 1267
Hpy188I	TCNGA	5 cut(s)	478, 496, 514, 1047, 1590
Hpy8I	GTNNAC	3 cut(s)	816, 1101, 1267
Hpy99I	CGWCG	1 cut(s)	450
HpyAV	CCTTC	6 cut(s)	8, 202, 794, 1240, 1544, 1624
HpyCH4III	ACNGT	7 cut(s)	305, 332, 398, 450, 534, 807, 1342
HpyCH4IV	ACGT	4 cut(s)	172, 343, 481, 818
HpyCH4V	TGCA	8 cut(s)	617, 1034, 1256, 1295, 1352, 1364, 1426, 1523
HpyF10VI	GCNNNNNNNGC	5 cut(s)	605, 614, 763, 950, 1301
HpyF3I	CTNAG	5 cut(s)	1072, 1202, 1502, 1570, 1639
HpySE526I	ACGT	4 cut(s)	172, 343, 481, 818
Hsp92I	GRCGYC	1 cut(s)	581
Hsp92II	CATG	7 cut(s)	95, 122, 679, 761, 1299, 1543, 1610
HspAI	GCGC	2 cut(s)	581, 710
KasI	GGCGCC	1 cut(s)	580
KflI	GGGWCCC	1 cut(s)	1118
Ksp22I	TGATCA	1 cut(s)	373
LguI	GCTCTTC	1 cut(s)	221
LmnI	GCTCC	2 cut(s)	468, 1177
Lsp1109I	GCAGC	4 cut(s)	586, 601, 629, 1018
LweI	GCATC	1 cut(s)	862
MaeI	CTAG	5 cut(s)	74, 633, 704, 753, 945
MaeII	ACGT	4 cut(s)	172, 343, 481, 818
MaeIII	GTNAC	6 cut(s)	8, 450, 947, 1282, 1486, 1565
MbiI	CCGCTC	2 cut(s)	474, 1304
MboII	GAAGA	8 cut(s)	107, 129, 238, 1083, 1400, 1526, 1704, 1748
MflI	RGATCY	2 cut(s)	929, 1273
MhlI	GDGCHC	3 cut(s)	83, 1182, 1200
MluCI	AATT	4 cut(s)	1240, 1365, 1559, 1697
Mly113I	GGCGCC	1 cut(s)	581
MlyI	GAGTC	5 cut(s)	92, 733, 777, 1196, 1471
MmeI	TCCRAC	2 cut(s)	1063, 1465
Mph1103I	ATGCAT	1 cut(s)	1258
MroXI	GAANNNNTTC	1 cut(s)	1634
MseI	TTAA	2 cut(s)	126, 1317
MslI	CAYNNNNRTG	1 cut(s)	1133
MspA1I	CMGCKG	1 cut(s)	1493
MspR9I	CCNGG	7 cut(s)	626, 660, 693, 867, 1358, 1446, 1620
Mva1269I	GAATGC	1 cut(s)	1256
MvaI	CCWGG	7 cut(s)	626, 660, 693, 867, 1358, 1446, 1620
MvnI	CGCG	2 cut(s)	417, 538
MwoI	GCNNNNNNNGC	5 cut(s)	605, 614, 763, 950, 1301
NarI	GGCGCC	1 cut(s)	581
NlaIII	CATG	7 cut(s)	95, 122, 679, 761, 1299, 1543, 1610
NlaIV	GGNNCC	9 cut(s)	329, 470, 582, 630, 690, 1119, 1120, 1198, 1199
NmeAIII	GCCGAG	1 cut(s)	742
NmuCI	GTSAC	1 cut(s)	450
NruI	TCGCGA	2 cut(s)	417, 538
NsiI	ATGCAT	1 cut(s)	1258
NspI	RCATGY	4 cut(s)	679, 761, 1299, 1543
NspV	TTCGAA	2 cut(s)	140, 1244
PaeI	GCATGC	1 cut(s)	761
PaeR7I	CTCGAG	1 cut(s)	108
PagI	TCATGA	3 cut(s)	91, 118, 1606
PceI	AGGCCT	1 cut(s)	1594
PciI	ACATGT	1 cut(s)	675
PciSI	GCTCTTC	1 cut(s)	221
PcsI	WCGNNNNNNNCGW	2 cut(s)	388, 815
PctI	GAATGC	1 cut(s)	1256
PdmI	GAANNNNTTC	1 cut(s)	1634
PfeI	GAWTC	3 cut(s)	113, 134, 1585
PflMI	CCANNNNNTGG	2 cut(s)	1625, 1717
PkrI	GCNGC	6 cut(s)	473, 601, 616, 619, 1033, 1303
Ple19I	CGATCG	1 cut(s)	421
PleI	GAGTC	5 cut(s)	92, 733, 776, 1195, 1471
PluTI	GGCGCC	1 cut(s)	584
PpsI	GAGTC	5 cut(s)	92, 733, 776, 1195, 1471
PpuMI	RGGWCCY	1 cut(s)	1118
PscI	ACATGT	1 cut(s)	675
PshAI	GACNNNNGTC	1 cut(s)	508
Psp124BI	GAGCTC	2 cut(s)	83, 1182
Psp1406I	AACGTT	1 cut(s)	818
Psp5II	RGGWCCY	1 cut(s)	1118
Psp6I	CCWGG	7 cut(s)	624, 658, 691, 865, 1356, 1444, 1618
PspFI	CCCAGC	1 cut(s)	860
PspGI	CCWGG	7 cut(s)	624, 658, 691, 865, 1356, 1444, 1618
PspN4I	GGNNCC	9 cut(s)	329, 470, 582, 630, 690, 1119, 1120, 1198, 1199
PspOMI	GGGCCC	1 cut(s)	1196
PspPI	GGNCC	7 cut(s)	328, 688, 863, 1043, 1118, 1196, 1197
PspPPI	RGGWCCY	1 cut(s)	1118
PsrI	GAACNNNNNNTAC	2 cut(s)	711, 743
PstI	CTGCAG	1 cut(s)	619
PsuI	RGATCY	2 cut(s)	929, 1273
PvuI	CGATCG	1 cut(s)	421
PvuII	CAGCTG	1 cut(s)	1493
RruI	TCGCGA	2 cut(s)	417, 538
RsaI	GTAC	3 cut(s)	720, 1167, 1453
RsaNI	GTAC	3 cut(s)	719, 1166, 1452
RseI	CAYNNNNRTG	1 cut(s)	1133
SacI	GAGCTC	2 cut(s)	83, 1182
SapI	GCTCTTC	1 cut(s)	221
SaqAI	TTAA	2 cut(s)	126, 1317
SatI	GCNGC	6 cut(s)	472, 600, 615, 618, 1032, 1302
Sau96I	GGNCC	7 cut(s)	328, 688, 863, 1043, 1118, 1196, 1197
SchI	GAGTC	5 cut(s)	92, 733, 777, 1196, 1471
ScrFI	CCNGG	7 cut(s)	626, 660, 693, 867, 1358, 1446, 1620
SduI	GDGCHC	3 cut(s)	83, 1182, 1200
SfaNI	GCATC	1 cut(s)	862
SfcI	CTRYAG	1 cut(s)	615
SfoI	GGCGCC	1 cut(s)	582
Sfr274I	CTCGAG	1 cut(s)	108
SfuI	TTCGAA	2 cut(s)	140, 1244
SinI	GGWCC	4 cut(s)	328, 688, 1043, 1118
SlaI	CTCGAG	1 cut(s)	108
SmiMI	CAYNNNNRTG	1 cut(s)	1133
SmlI	CTYRAG	3 cut(s)	108, 1112, 1479
SmoI	CTYRAG	3 cut(s)	108, 1112, 1479
SphI	GCATGC	1 cut(s)	761
Sse9I	AATT	4 cut(s)	1240, 1365, 1559, 1697
SseBI	AGGCCT	1 cut(s)	1594
SsiI	CCGC	6 cut(s)	472, 875, 1126, 1140, 1302, 1649
SspDI	GGCGCC	1 cut(s)	580
SspMI	CTAG	5 cut(s)	74, 633, 704, 753, 945
SstI	GAGCTC	2 cut(s)	83, 1182
StuI	AGGCCT	1 cut(s)	1594
StyD4I	CCNGG	7 cut(s)	624, 658, 691, 865, 1356, 1444, 1618
StyI	CCWWGG	1 cut(s)	1750
TaaI	ACNGT	7 cut(s)	305, 332, 398, 450, 534, 807, 1342
TaiI	ACGT	4 cut(s)	175, 346, 484, 821
TaqI	TCGA	5 cut(s)	109, 140, 391, 421, 1244
TaqII	GACCGA	1 cut(s)	450
TasI	AATT	4 cut(s)	1240, 1365, 1559, 1697
TatI	WGTACW	1 cut(s)	718
TauI	GCSGC	2 cut(s)	474, 1304
TfiI	GAWTC	3 cut(s)	113, 134, 1585
Tru1I	TTAA	2 cut(s)	126, 1317
Tru9I	TTAA	2 cut(s)	126, 1317
TscAI	CASTG	2 cut(s)	154, 862
TseFI	GTSAC	1 cut(s)	450
TseI	GCWGC	4 cut(s)	599, 614, 617, 1031
Tsp45I	GTSAC	1 cut(s)	450
TspDTI	ATGAA	6 cut(s)	80, 108, 177, 816, 1527, 1700
TspGWI	ACGGA	3 cut(s)	36, 198, 1266
TspRI	CASTG	2 cut(s)	154, 862
Van91I	CCANNNNNTGG	2 cut(s)	1625, 1717
VpaK11BI	GGWCC	4 cut(s)	328, 688, 1043, 1118
XapI	RAATTY	3 cut(s)	1240, 1559, 1697
XbaI	TCTAGA	1 cut(s)	73
XceI	RCATGY	4 cut(s)	679, 761, 1299, 1543
XhoI	CTCGAG	1 cut(s)	108
XmiI	GTMKAC	1 cut(s)	1100
XmnI	GAANNNNTTC	1 cut(s)	1634
XspI	CTAG	5 cut(s)	74, 633, 704, 753, 945
Zsp2I	ATGCAT	1 cut(s)	1258

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.