Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0003223

Physical Location & Seq

Genomic Coordinates Reverse (-)

12479051 .. 12484390

Gene Structure 5340 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1151300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1797 bp

ATGATGACGGAATACGAAGGGAGGTACGATGGTAACGGAGAGGACGCTGGCACATACGCCGATGGCGGTTCCTCTCCCCAACCTCGTGCTGCCGTCCACGGCGGTGCCGACGATTACAGCGATTCCAAATCTCAGGATTGTGCTCATGAGTCTCGTGATTACGAGAGAGAATCTTCAAAGAGCAGAGAAAAGGATAGAGATAAAGGGCGTGATAAGGAGAGGGACAGGGACCGGGACAGAGATAGAGACAGGGGGAGAAGCAAGGACAAGGATAGGGAAAGGGATAGGGATAGAGATAGGGTTAGGGATAGGGACCGTGATAGAGAAAGAGAAAGAGACCGGGACAGGGATCGCGATCGTCATCACAGAGACCGCCACAGGGATCGCGAGAGAAGTGAGCGACGGAGAGACAAGGACGACGACGACAATGGTCACTACCGTACCCGGGACTCTGATAGACGGAGGGATTATGACAGAGACAGAGAGGATAGGCATAGGCGCAAGTCCCGGTCTCGTTCAAGAGCTAGATCTGAGCACAAATCCAGATCGAGGTCACGCTCTCGTTCACGCTCAAAAAGCAAAAGGATTAGCGGTTTTGACATGGCACCTCCTGCTTCTGCAATGTTAGCTGGTGCTGCTGTTGCTGCAGCAGGGCAAATTCCTGGGACTAGTCCTACCATTCCGGGAATGTTCCCAAACATGTTCCCTCTGTCGACCGGTCAGTTTGCACCCCTTCCAGTTATGCCTGTTCAGGCAATGACTCAACAGGCTACTAGGCATGCCCGACGAGTGTACGTTGGAGGGCTTCCTCCCACAGCAAATGAACAGTCTGTTGCTACATTTTTCAGCCAAGTTATGGCTGCAATTGGAGGGAACACTGCTGGCCCAGGAGATGCTGTTGTCAATGTCTACATAAACCATGAAAAGAAATTTGCTTTTGTGGAGATGAGATCGGTTGAAGAGGCTAGCAATGCAATGGCTCTGGATGGAATTATTTTTGAGGGAGCCCCTGTTAAGGTGCGGAGACCTAGTGATTACAACCCATCTCTGGCTGCAACACTCGGTCCAAGCCAGCCCAATCCCAACCTGAACCTGGCCGCTGTGGGGCTTACACCGGGTTCTGCTGGTGGGCTTGAGGGCCCTGATCGCATATTTGTTGGTGGGCTGCCATATTACTTCACAGAAGCACAGATCAAGGAGTTACTCGAATCCTTTGGACCCCTTCGTGGTTTTGATTTAGTGAAAGACAGGGAAACAGGAAACTCAAAAGGCTATGCCTTTTGTGTTTACCAAGACCTTTCTGTTACAGACATAGCTTGTGCAGCGCTGAACGGTATTAAAATGGGTGACAAGACGCTCACAGTTAGGCGTGCTAACCAAGGTGCCAACCAGCCCAAACCTGAGCAAGAGAGCGTTCTGTTGCACGCACAGCAGCAAATTGCATTGCAGAGGTTCATGCTGTTGCAACCGCCTAGTTCTGTTGCCACCAAGGTTGTATGTTTAACTCAGGTAGTAACTGCAGATGAGCTTAGGGACGATACTGAGTATGATGATATCTTGGAAGACATGAGGCTTGAAGGCGAAAAGTTTGGTGCATTAGTGAACGTCATCATCCCGCGTCCAAGACCAGATGGTGAACTTGCCCCCGGTGTTGGGAAGGTGTTTTTGGAGTACGCAGATACTGATGGCTCCACAAAAGCCCGCACGGGGTTGAATGGCCGGAAATTTGGCGGCAATCAGGTGGTAGCAGTGTTTTATCCGGAGGACAAGTTCGGCCAGCGCGACTACGAGGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000243 GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008187 GO:0008380 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0030628 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0036002 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0050896 GO:0051704 GO:0051707 GO:0070013 GO:0071004 GO:0071010 GO:0071704 GO:0089701 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1

Protein Analysis

599

Amino Acids

66.95

Weight (kDa)

8.63

Isoelectric Point (pI)

48.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	384 - 453	1.4e-17	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003223)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60900 AT4G36690 AT4G36690 AT4G36690 AT4G36690
fragaria_vesca	FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g18180
malus_domestica	MD02G1151300.v1.1 MD15G1265800.v1.1
prunus_persica	Prupe.7G151700_v2.0.a1 Prupe.7G151700_v2.0.a1 Prupe.7G151700_v2.0.a1
pyrus_communis	pycom15g23150
rosa_chinensis	RchiOBHm_Chr2g0102011 RchiOBHm_Chr7g0198161
rosa_laevigata	RLG00000017126
rosa_multiflora	Rmu_co8319619.1_g000001 Rmu_sc0000157.1_g000005 Rmu_sc0001167.1_g000028
rosa_roxburghii	Rroxscaffold_2G00140830
rosa_rugosa	Rorug02G0103800 Rorug02G0103900 Rorug02G0104000
rosa_samantha	Rh2AG152000 Rh2BG157400 Rh2CG157400 Rh2DG157500
rosa_wichuraiana	Rw0G008320 Rw2G011870 Rw4G020950 Rw5G047310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	104, 604, 1382
AccB7I	CCANNNNNTGG	1 cut(s)	856
AccI	GTMKAC	2 cut(s)	713, 909
AccII	CGCG	4 cut(s)	354, 387, 1618, 1782
AccIII	TCCGGA	1 cut(s)	1759
AclWI	GGATC	2 cut(s)	357, 390
AcoI	YGGCCR	3 cut(s)	1095, 1717, 1774
AcsI	RAATTY	3 cut(s)	657, 929, 1724
AfaI	GTAC	4 cut(s)	26, 442, 794, 1673
AfeI	AGCGCT	1 cut(s)	1326
AflIII	ACRYGT	1 cut(s)	699
AgeI	ACCGGT	1 cut(s)	716
AgsI	TTSAA	5 cut(s)	177, 519, 959, 1577, 1714
AhlI	ACTAGT	1 cut(s)	668
AjnI	CCWGG	3 cut(s)	661, 886, 1092
AjuI	GAANNNNNNNTTGG	2 cut(s)	1649, 1681
AleI	CACNNNNGTG	1 cut(s)	102
AloI	GAACNNNNNNTCC	2 cut(s)	1754, 1786
AluBI	AGCT	4 cut(s)	524, 629, 1316, 1528
AluI	AGCT	4 cut(s)	524, 629, 1316, 1528
Alw21I	GWGCWC	2 cut(s)	145, 537
Alw26I	GTCTC	8 cut(s)	156, 240, 330, 363, 402, 471, 516, 1018
AlwI	GGATC	2 cut(s)	357, 390
AlwNI	CAGNNNCTG	1 cut(s)	1682
Ama87I	CYCGRG	1 cut(s)	444
Aor13HI	TCCGGA	1 cut(s)	1759
Aor51HI	AGCGCT	1 cut(s)	1326
AoxI	GGCC	5 cut(s)	883, 1095, 1138, 1717, 1774
ApaI	GGGCCC	1 cut(s)	1142
ApeKI	GCWGC	9 cut(s)	89, 635, 644, 647, 860, 1052, 1165, 1322, 1432
ApoI	RAATTY	3 cut(s)	657, 929, 1724
ArsI	GACNNNNNNTTYG	2 cut(s)	812, 844
AsiGI	ACCGGT	1 cut(s)	716
AspLEI	GCGC	3 cut(s)	501, 1327, 1782
AspS9I	GGNCC	7 cut(s)	229, 313, 884, 1064, 1138, 1139, 1217
AsuC2I	CCSGG	8 cut(s)	233, 341, 445, 446, 508, 684, 1116, 1647
AsuHPI	GGTGA	2 cut(s)	1358, 1646
AsuNHI	GCTAGC	1 cut(s)	965
AvaI	CYCGRG	1 cut(s)	444
AvaII	GGWCC	4 cut(s)	229, 313, 1064, 1217
BaeGI	GKGCMC	1 cut(s)	1142
BaeI	ACNNNNGTAYC	4 cut(s)	16, 49, 424, 457
BanI	GGYRCC	3 cut(s)	104, 604, 1382
BanII	GRGCYC	2 cut(s)	1009, 1142
BauI	CACGAG	2 cut(s)	84, 153
BbsI	GAAGAC	1 cut(s)	1569
Bbv12I	GWGCWC	2 cut(s)	145, 537
BbvI	GCAGC	9 cut(s)	76, 622, 631, 659, 847, 1039, 1152, 1334, 1444
BccI	CCATC	6 cut(s)	23, 56, 980, 1051, 1625, 1679
BceAI	ACGGC	2 cut(s)	77, 115
BciT130I	CCWGG	3 cut(s)	663, 888, 1094
BcnI	CCSGG	8 cut(s)	233, 341, 445, 446, 508, 684, 1116, 1647
BcoDI	GTCTC	8 cut(s)	156, 240, 330, 363, 402, 471, 516, 1018
BcuI	ACTAGT	1 cut(s)	668
BfaI	CTAG	7 cut(s)	525, 669, 774, 966, 1029, 1473, 1795
BfmI	CTRYAG	2 cut(s)	645, 1518
BfoI	RGCGCY	1 cut(s)	1328
BglII	AGATCT	1 cut(s)	527
Bme18I	GGWCC	4 cut(s)	229, 313, 1064, 1217
BmeT110I	CYCGRG	1 cut(s)	444
BmgT120I	GGNCC	7 cut(s)	229, 313, 884, 1064, 1138, 1139, 1217
BmsI	GCATC	1 cut(s)	883
BmtI	GCTAGC	1 cut(s)	969
BoxI	GACNNNNGTC	1 cut(s)	429
BpiI	GAAGAC	1 cut(s)	1569
Bpu10I	CCTNAGC	2 cut(s)	1401, 1529
BpuEI	CTTGAG	1 cut(s)	1154
BpuMI	CCSGG	8 cut(s)	233, 341, 445, 446, 508, 684, 1116, 1647
BsaBI	GATNNNNATC	2 cut(s)	354, 360
BsaI	GGTCTC	4 cut(s)	330, 363, 516, 1018
BsaJI	CCNNGG	7 cut(s)	97, 444, 662, 886, 1378, 1488, 1645
BsaWI	WCCGGW	2 cut(s)	716, 1759
BsaXI	ACNNNNNCTCC	8 cut(s)	882, 912, 996, 1015, 1026, 1045, 1754, 1784
Bse118I	RCCGGY	1 cut(s)	716
Bse1I	ACTGG	1 cut(s)	737
Bse3DI	GCAATG	5 cut(s)	627, 762, 976, 981, 1442
Bse8I	GATNNNNATC	2 cut(s)	354, 360
BseAI	TCCGGA	1 cut(s)	1759
BseBI	CCWGG	3 cut(s)	663, 888, 1094
BseDI	CCNNGG	7 cut(s)	97, 444, 662, 886, 1378, 1488, 1645
BseGI	GGATG	2 cut(s)	991, 1611
BseJI	GATNNNNATC	2 cut(s)	354, 360
BseMI	GCAATG	5 cut(s)	627, 762, 976, 981, 1442
BseMII	CTCAG	5 cut(s)	146, 522, 1392, 1520, 1533
BseNI	ACTGG	1 cut(s)	737
BseSI	GKGCMC	1 cut(s)	1142
BseXI	GCAGC	9 cut(s)	76, 622, 631, 659, 847, 1039, 1152, 1334, 1444
BsgI	GTGCAG	1 cut(s)	1341
Bsh1236I	CGCG	4 cut(s)	354, 387, 1618, 1782
Bsh1285I	CGRYCG	2 cut(s)	358, 717
BshFI	GGCC	5 cut(s)	885, 1097, 1140, 1719, 1776
BshNI	GGYRCC	3 cut(s)	104, 604, 1382
BshTI	ACCGGT	1 cut(s)	716
BsiEI	CGRYCG	2 cut(s)	358, 717
BsiHKAI	GWGCWC	2 cut(s)	145, 537
BsiHKCI	CYCGRG	1 cut(s)	444
BslFI	GGGAC	9 cut(s)	236, 242, 248, 326, 356, 461, 490, 679, 1547
BsmAI	GTCTC	8 cut(s)	156, 240, 330, 363, 402, 471, 516, 1018
BsmFI	GGGAC	9 cut(s)	236, 242, 248, 326, 356, 461, 490, 679, 1547
BsnI	GGCC	5 cut(s)	885, 1097, 1140, 1719, 1776
Bso31I	GGTCTC	4 cut(s)	330, 363, 516, 1018
BsoBI	CYCGRG	1 cut(s)	444
Bsp120I	GGGCCC	1 cut(s)	1138
Bsp1286I	GDGCHC	4 cut(s)	145, 537, 1009, 1142
Bsp13I	TCCGGA	1 cut(s)	1759
Bsp143I	GATC	8 cut(s)	349, 355, 382, 527, 545, 950, 1144, 1191
Bsp68I	TCGCGA	2 cut(s)	354, 387
BspANI	GGCC	5 cut(s)	885, 1097, 1140, 1719, 1776
BspCNI	CTCAG	5 cut(s)	145, 523, 1393, 1519, 1534
BspEI	TCCGGA	1 cut(s)	1759
BspFNI	CGCG	4 cut(s)	354, 387, 1618, 1782
BspHI	TCATGA	1 cut(s)	145
BspMAI	CTGCAG	2 cut(s)	649, 1522
BspOI	GCTAGC	1 cut(s)	969
BspPI	GGATC	2 cut(s)	357, 390
BspT107I	GGYRCC	3 cut(s)	104, 604, 1382
BspTNI	GGTCTC	4 cut(s)	330, 363, 516, 1018
BsrDI	GCAATG	5 cut(s)	627, 762, 976, 981, 1442
BsrFI	RCCGGY	1 cut(s)	716
BsrI	ACTGG	1 cut(s)	737
BssAI	RCCGGY	1 cut(s)	716
BssECI	CCNNGG	7 cut(s)	97, 444, 662, 886, 1378, 1488, 1645
BssMI	GATC	8 cut(s)	349, 355, 382, 527, 545, 950, 1144, 1191
BssSI	CACGAG	2 cut(s)	84, 153
BssT1I	CCWWGG	2 cut(s)	1378, 1488
Bst2BI	CACGAG	2 cut(s)	84, 153
Bst2UI	CCWGG	3 cut(s)	663, 888, 1094
Bst4CI	ACNGT	5 cut(s)	317, 440, 828, 1334, 1363
Bst6I	CTCTTC	1 cut(s)	954
BstAPI	GCANNNNNTGC	1 cut(s)	611
BstC8I	GCNNGC	9 cut(s)	49, 780, 883, 967, 1073, 1371, 1425, 1702, 1778
BstDEI	CTNAG	6 cut(s)	132, 531, 1401, 1506, 1529, 1542
BstDSI	CCRYGG	1 cut(s)	97
BstF5I	GGATG	2 cut(s)	991, 1611
BstFNI	CGCG	4 cut(s)	354, 387, 1618, 1782
BstH2I	RGCGCY	1 cut(s)	1328
BstHHI	GCGC	3 cut(s)	501, 1327, 1782
BstKTI	GATC	8 cut(s)	352, 358, 385, 530, 548, 953, 1147, 1194
BstMAI	GTCTC	8 cut(s)	156, 240, 330, 363, 402, 471, 516, 1018
BstMBI	GATC	8 cut(s)	349, 355, 382, 527, 545, 950, 1144, 1191
BstMCI	CGRYCG	2 cut(s)	358, 717
BstNI	CCWGG	3 cut(s)	663, 888, 1094
BstNSI	RCATGY	2 cut(s)	703, 782
BstPAI	GACNNNNGTC	1 cut(s)	429
BstSFI	CTRYAG	2 cut(s)	645, 1518
BstSLI	GKGCMC	1 cut(s)	1142
BstUI	CGCG	4 cut(s)	354, 387, 1618, 1782
BstV1I	GCAGC	9 cut(s)	76, 622, 631, 659, 847, 1039, 1152, 1334, 1444
BstV2I	GAAGAC	1 cut(s)	1569
BstX2I	RGATCY	1 cut(s)	527
BstYI	RGATCY	1 cut(s)	527
BsuRI	GGCC	5 cut(s)	885, 1097, 1140, 1719, 1776
BtgI	CCRYGG	1 cut(s)	97
BtsCI	GGATG	2 cut(s)	991, 1611
BtsI	GCAGTG	2 cut(s)	876, 1755
BtsIMutI	CAGTG	2 cut(s)	876, 1755
BtuMI	TCGCGA	2 cut(s)	354, 387
Cac8I	GCNNGC	9 cut(s)	49, 780, 883, 967, 1073, 1371, 1425, 1702, 1778
CaiI	CAGNNNCTG	1 cut(s)	1682
CciI	TCATGA	1 cut(s)	145
CfoI	GCGC	3 cut(s)	501, 1327, 1782
Cfr10I	RCCGGY	1 cut(s)	716
Cfr13I	GGNCC	7 cut(s)	229, 313, 884, 1064, 1138, 1139, 1217
Cfr9I	CCCGGG	1 cut(s)	444
CseI	GACGC	3 cut(s)	53, 1363, 1607
Csp6I	GTAC	4 cut(s)	25, 441, 793, 1672
CspAI	ACCGGT	1 cut(s)	716
CspCI	CAANNNNNGTGG	2 cut(s)	1474, 1509
CviAII	CATG	7 cut(s)	146, 601, 700, 779, 920, 1456, 1567
CviQI	GTAC	4 cut(s)	25, 441, 793, 1672
DdeI	CTNAG	6 cut(s)	132, 531, 1401, 1506, 1529, 1542
DpnI	GATC	8 cut(s)	351, 357, 384, 529, 547, 952, 1146, 1193
DpnII	GATC	8 cut(s)	349, 355, 382, 527, 545, 950, 1144, 1191
EaeI	YGGCCR	3 cut(s)	1095, 1717, 1774
Eam1104I	CTCTTC	1 cut(s)	954
EarI	CTCTTC	1 cut(s)	954
Eco130I	CCWWGG	2 cut(s)	1378, 1488
Eco24I	GRGCYC	2 cut(s)	1009, 1142
Eco31I	GGTCTC	4 cut(s)	330, 363, 516, 1018
Eco32I	GATATC	1 cut(s)	1555
Eco47I	GGWCC	4 cut(s)	229, 313, 1064, 1217
Eco47III	AGCGCT	1 cut(s)	1326
Eco88I	CYCGRG	1 cut(s)	444
EcoO109I	RGGNCCY	2 cut(s)	1138, 1139
EcoRII	CCWGG	3 cut(s)	661, 886, 1092
EcoRV	GATATC	1 cut(s)	1555
EcoT14I	CCWWGG	2 cut(s)	1378, 1488
EcoT38I	GRGCYC	2 cut(s)	1009, 1142
ErhI	CCWWGG	2 cut(s)	1378, 1488
FaeI	CATG	7 cut(s)	149, 604, 703, 782, 923, 1459, 1570
FaqI	GGGAC	9 cut(s)	236, 242, 248, 326, 356, 461, 490, 679, 1547
FatI	CATG	7 cut(s)	145, 600, 699, 778, 919, 1455, 1566
FauI	CCCGC	2 cut(s)	1623, 1709
FblI	GTMKAC	2 cut(s)	713, 909
FokI	GGATG	2 cut(s)	998, 1598
FriOI	GRGCYC	2 cut(s)	1009, 1142
FspBI	CTAG	7 cut(s)	525, 669, 774, 966, 1029, 1473, 1795
GlaI	GCGC	3 cut(s)	500, 1326, 1781
HaeII	RGCGCY	1 cut(s)	1328
HaeIII	GGCC	5 cut(s)	885, 1097, 1140, 1719, 1776
HgaI	GACGC	3 cut(s)	53, 1363, 1607
HhaI	GCGC	3 cut(s)	501, 1327, 1782
Hin1II	CATG	7 cut(s)	149, 604, 703, 782, 923, 1459, 1570
Hin6I	GCGC	3 cut(s)	499, 1325, 1780
HinP1I	GCGC	3 cut(s)	499, 1325, 1780
HincII	GTYRAC	1 cut(s)	714
HindII	GTYRAC	1 cut(s)	714
HinfI	GANTC	6 cut(s)	122, 149, 170, 449, 760, 1208
HphI	GGTGA	2 cut(s)	1358, 1646
Hpy166II	GTNNAC	8 cut(s)	97, 566, 714, 793, 910, 1288, 1603, 1637
Hpy188I	TCNGA	2 cut(s)	454, 532
Hpy188III	TCNNGA	9 cut(s)	134, 146, 155, 353, 386, 519, 543, 983, 1760
Hpy8I	GTNNAC	8 cut(s)	97, 566, 714, 793, 910, 1288, 1603, 1637
Hpy99I	CGWCG	5 cut(s)	113, 405, 422, 425, 789
HpyAV	CCTTC	5 cut(s)	11, 743, 1232, 1571, 1651
HpyCH4III	ACNGT	5 cut(s)	317, 440, 828, 1334, 1363
HpyCH4IV	ACGT	2 cut(s)	795, 1605
HpyF3I	CTNAG	6 cut(s)	132, 531, 1401, 1506, 1529, 1542
HpySE526I	ACGT	2 cut(s)	795, 1605
Hsp92II	CATG	7 cut(s)	149, 604, 703, 782, 923, 1459, 1570
HspAI	GCGC	3 cut(s)	499, 1325, 1780
Kpn2I	TCCGGA	1 cut(s)	1759
Kzo9I	GATC	8 cut(s)	349, 355, 382, 527, 545, 950, 1144, 1191
LmnI	GCTCC	2 cut(s)	1004, 1694
Lsp1109I	GCAGC	9 cut(s)	76, 622, 631, 659, 847, 1039, 1152, 1334, 1444
LweI	GCATC	1 cut(s)	883
MaeI	CTAG	7 cut(s)	525, 669, 774, 966, 1029, 1473, 1795
MaeII	ACGT	2 cut(s)	795, 1605
MaeIII	GTNAC	7 cut(s)	32, 431, 552, 1200, 1303, 1346, 1513
MalI	GATC	8 cut(s)	351, 357, 384, 529, 547, 952, 1146, 1193
MboI	GATC	8 cut(s)	349, 355, 382, 527, 545, 950, 1144, 1191
MboII	GAAGA	3 cut(s)	165, 971, 1574
MfeI	CAATTG	1 cut(s)	864
MflI	RGATCY	1 cut(s)	527
MhlI	GDGCHC	4 cut(s)	145, 537, 1009, 1142
MluCI	AATT	6 cut(s)	657, 864, 929, 990, 1437, 1724
MlyI	GAGTC	3 cut(s)	158, 443, 754
MmeI	TCCRAC	1 cut(s)	778
MroI	TCCGGA	1 cut(s)	1759
MseI	TTAA	3 cut(s)	1014, 1338, 1502
MslI	CAYNNNNRTG	1 cut(s)	102
MspA1I	CMGCKG	1 cut(s)	1100
MunI	CAATTG	1 cut(s)	864
MvaI	CCWGG	3 cut(s)	663, 888, 1094
MvnI	CGCG	4 cut(s)	354, 387, 1618, 1782
NciI	CCSGG	8 cut(s)	233, 341, 445, 446, 508, 684, 1116, 1647
NdeII	GATC	8 cut(s)	349, 355, 382, 527, 545, 950, 1144, 1191
NheI	GCTAGC	1 cut(s)	965
NlaIII	CATG	7 cut(s)	149, 604, 703, 782, 923, 1459, 1570
NmuCI	GTSAC	3 cut(s)	431, 552, 1346
NruI	TCGCGA	2 cut(s)	354, 387
NspI	RCATGY	2 cut(s)	703, 782
OliI	CACNNNNGTG	1 cut(s)	102
PaeI	GCATGC	1 cut(s)	782
PagI	TCATGA	1 cut(s)	145
PciI	ACATGT	1 cut(s)	699
PcsI	WCGNNNNNNNCGW	3 cut(s)	105, 117, 1779
PfeI	GAWTC	3 cut(s)	122, 170, 1208
PflMI	CCANNNNNTGG	1 cut(s)	856
PfoI	TCCNGGA	1 cut(s)	682
PinAI	ACCGGT	1 cut(s)	716
Ple19I	CGATCG	1 cut(s)	358
PleI	GAGTC	3 cut(s)	157, 443, 754
PpsI	GAGTC	3 cut(s)	157, 443, 754
PscI	ACATGT	1 cut(s)	699
PshAI	GACNNNNGTC	1 cut(s)	429
Psp6I	CCWGG	3 cut(s)	661, 886, 1092
PspGI	CCWGG	3 cut(s)	661, 886, 1092
PspOMI	GGGCCC	1 cut(s)	1138
PspPI	GGNCC	7 cut(s)	229, 313, 884, 1064, 1138, 1139, 1217
PstI	CTGCAG	2 cut(s)	649, 1522
PstNI	CAGNNNCTG	1 cut(s)	1682
PsuI	RGATCY	1 cut(s)	527
PvuI	CGATCG	1 cut(s)	358
RruI	TCGCGA	2 cut(s)	354, 387
RsaI	GTAC	4 cut(s)	26, 442, 794, 1673
RsaNI	GTAC	4 cut(s)	25, 441, 793, 1672
RseI	CAYNNNNRTG	1 cut(s)	102
SalI	GTCGAC	1 cut(s)	712
SaqAI	TTAA	3 cut(s)	1014, 1338, 1502
Sau3AI	GATC	8 cut(s)	349, 355, 382, 527, 545, 950, 1144, 1191
Sau96I	GGNCC	7 cut(s)	229, 313, 884, 1064, 1138, 1139, 1217
SchI	GAGTC	3 cut(s)	158, 443, 754
SduI	GDGCHC	4 cut(s)	145, 537, 1009, 1142
SfaNI	GCATC	1 cut(s)	883
SfcI	CTRYAG	2 cut(s)	645, 1518
SinI	GGWCC	4 cut(s)	229, 313, 1064, 1217
SmaI	CCCGGG	1 cut(s)	446
SmiMI	CAYNNNNRTG	1 cut(s)	102
SmlI	CTYRAG	1 cut(s)	1133
SmoI	CTYRAG	1 cut(s)	1133
SpeI	ACTAGT	1 cut(s)	668
SphI	GCATGC	1 cut(s)	782
Sse9I	AATT	6 cut(s)	657, 864, 929, 990, 1437, 1724
SspMI	CTAG	7 cut(s)	525, 669, 774, 966, 1029, 1473, 1795
StyI	CCWWGG	2 cut(s)	1378, 1488
TaaI	ACNGT	5 cut(s)	317, 440, 828, 1334, 1363
TaiI	ACGT	2 cut(s)	798, 1608
TaqI	TCGA	3 cut(s)	548, 713, 1206
TaqII	GACCGA	1 cut(s)	1052
TasI	AATT	6 cut(s)	657, 864, 929, 990, 1437, 1724
TauI	GCSGC	2 cut(s)	1100, 1734
TfiI	GAWTC	3 cut(s)	122, 170, 1208
Tru1I	TTAA	3 cut(s)	1014, 1338, 1502
Tru9I	TTAA	3 cut(s)	1014, 1338, 1502
TscAI	CASTG	2 cut(s)	883, 1755
TseFI	GTSAC	3 cut(s)	431, 552, 1346
TseI	GCWGC	9 cut(s)	89, 635, 644, 647, 860, 1052, 1165, 1322, 1432
Tsp45I	GTSAC	3 cut(s)	431, 552, 1346
TspDTI	ATGAA	3 cut(s)	837, 936, 1444
TspGWI	ACGGA	4 cut(s)	23, 51, 418, 475
TspMI	CCCGGG	1 cut(s)	444
TspRI	CASTG	2 cut(s)	883, 1755
Van91I	CCANNNNNTGG	1 cut(s)	856
VpaK11BI	GGWCC	4 cut(s)	229, 313, 1064, 1217
XapI	RAATTY	3 cut(s)	657, 929, 1724
XceI	RCATGY	2 cut(s)	703, 782
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1090
XmaI	CCCGGG	1 cut(s)	444
XmiI	GTMKAC	2 cut(s)	713, 909
XspI	CTAG	7 cut(s)	525, 669, 774, 966, 1029, 1473, 1795

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.