Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0003223

Physical Location & Seq

Genomic Coordinates Reverse (-)

22798320 .. 22804078

Gene Structure 5759 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1265800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

ATGATGACGGACTACGAAGGAAGGTACGAAGGCAACGGAGAGGACCCTGGCAACTACGCCGACGGTGGGTCCCCTCCTCAACCTCGTGCCGCCAACCATGGCGGTGCCGACGATTACAGTGATTCCAAATCTCAGCATGAATATCATGATTATGAGAGAGAATCTTCAAAGAGCAGAGAAAAGGATAGAGATAAAGGGCGTGATAAGGAGAAGGACAGAGATAGGGACAGGGACAGGGACAGGGGGAGAAGCAAGGACAAGGATAAGGAAAGGGATAAGGACAGGGACAGAGATAGGGCTAGGGAGAGGGATAGGAATCGGGATAGAGAAAGAGAAAGGGACCGAGACAGGGATCGTGATCGTCATCACAGAGACCGCCACAGGGATCGTGAAAGAAGTGAGCGACGCAGAGATAAGGACGACGACGGCGATGATCACTACCGTACCCGGGACTCTGATAGGCGAAGGGATTATGACAGAGACAGAGAGGATAGGCACAGGCGCAAGTCGCGGTCTCGTTCAAGGGGTAGATCTGAGCACAAATCCAGATCAAGGTCACGTTCTCGTTCACGTTCAAAAAGCAAAAGGATCAGTGGTTTTGACATGGCACCTCCTGCTTCTGCAATGTTAGCTGGTGCTGCTGTTGCTGCAGCAGGGCAAATTCCTGGGACTAGTCCTACCATTCCGGGGATGTTTCCAAACATGTTCCCTTTGTCGACCGGTCAGTTTGCACCCCTTCCAGTTATGCCTGTTCAGGCGATGACTCAACAGGCTACTAGGCATGCCCGACGGGTGTACGTTGGAGGTCTTCCCCCAACAGCAAATGAACAGTCAGTTGCTACATTTTTCAGCCAAGTTATGGCTGCAATTGGAGGGAACACTGCCGGCCCAGGAGATGCTGTTGTCAATGTTTACATAAACCATGAAAAGAAATTTGCTTTTGTGGAGATGAGATCGGTTGAAGAGGCTAGCAATGCAATGGCTCTGGATGGAATTATTTTTGAGTTCACTTTCTTGGTATTGACTCTTCTCTCTTCTTTCTTTCTTTTTTCCGGACAATTGCTACAGGGAGCCCCTGTTAAGGTGCGGAGACCTAGCGATTACAACCCATCTCTGGCTGCAACACTCGGCCCAAGCCAGCCCAATCCCAATCTGAACCTGGCTGCTGTGGGGCTTACACCGGGTTCTGCTGGTGGGCTTGAGGGCCCTGACCGCATATTTGTTGGTGGGCTGCCATATTACTTCACAGAAGCACAGATCAAGGAATTACTTGAATCCTTTGGACCTCTTCGTGGTTTTGATTTAGTGAAAGACAGGGAAACAGGAAACTCAAAAGGCTATGCCTTTTGTGTTTACCAAGATCTTTCAGTTACAGACATAGCTTGTGCAGCACTGAACGGCATTAAAATGGGCGACAAGACGCTCACAGTTAGGCGTGCTAACCAAGGTGCCAACCAGCCCAAACCTGAGCAAGAGAGTGTTCTGTTGCATGCACAGCAGCAAATTGCATTGCAGAGGTTCATGTTGTTGCAACCGCCTAGTTCTGTCGCCACCAAGGTTGTATGTTTAACTCAGGTAGTAACTGCAGATGAGCTTAGGGACGATACTGAGTATGATGATATCTTGGAAGACATGAGGCTTGAAGGCGAAAAGTTTGGTACATTAGTGAATGTCATCATCCCGCGTCCAAGACCAAATGGTGAACTTGCCCCCGGTGTTGGGAAGGTGTTTTTGGAGTATGCAGATACTGAGGGTTCTACAAAAGCCCGTACGGGGTTGAATGGCCGGAAATTTGGTGGCAATCAGGTGGTAGCAGTGTTTTATTCGGAGGACAAGTTTGGTGAGGGCGACTACGAGGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000243 GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008187 GO:0008380 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0030628 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0036002 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0050896 GO:0051704 GO:0051707 GO:0070013 GO:0071004 GO:0071010 GO:0071704 GO:0089701 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1

Protein Analysis

621

Amino Acids

69.55

Weight (kDa)

8.46

Isoelectric Point (pI)

46.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	406 - 475	1.4e-17	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003223)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60900 AT4G36690 AT4G36690 AT4G36690 AT4G36690
fragaria_vesca	FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g18180
malus_domestica	MD02G1151300.v1.1 MD15G1265800.v1.1
prunus_persica	Prupe.7G151700_v2.0.a1 Prupe.7G151700_v2.0.a1 Prupe.7G151700_v2.0.a1
pyrus_communis	pycom15g23150
rosa_chinensis	RchiOBHm_Chr2g0102011 RchiOBHm_Chr7g0198161
rosa_laevigata	RLG00000017126
rosa_multiflora	Rmu_co8319619.1_g000001 Rmu_sc0000157.1_g000005 Rmu_sc0001167.1_g000028
rosa_roxburghii	Rroxscaffold_2G00140830
rosa_rugosa	Rorug02G0103800 Rorug02G0103900 Rorug02G0104000
rosa_samantha	Rh2AG152000 Rh2BG157400 Rh2CG157400 Rh2DG157500
rosa_wichuraiana	Rw0G008320 Rw2G011870 Rw4G020950 Rw5G047310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	104, 607, 1448
AccB7I	CCANNNNNTGG	1 cut(s)	859
AccI	GTMKAC	1 cut(s)	716
AccII	CGCG	2 cut(s)	511, 1684
AccIII	TCCGGA	1 cut(s)	1052
AciI	CCGC	8 cut(s)	90, 102, 376, 511, 1087, 1213, 1535, 1682
AclWI	GGATC	3 cut(s)	360, 393, 596
AcoI	YGGCCR	1 cut(s)	1783
AcsI	RAATTY	3 cut(s)	660, 932, 1790
AfaI	GTAC	5 cut(s)	26, 445, 797, 1660, 1771
AflIII	ACRYGT	1 cut(s)	702
AgeI	ACCGGT	1 cut(s)	719
AgsI	TTSAA	7 cut(s)	168, 522, 576, 962, 1274, 1643, 1780
AhdI	GACNNNNNGTC	1 cut(s)	67
AhlI	ACTAGT	1 cut(s)	671
AjnI	CCWGG	4 cut(s)	46, 664, 889, 1158
AjuI	GAANNNNNNNTTGG	2 cut(s)	1715, 1747
AluBI	AGCT	3 cut(s)	632, 1382, 1594
AluI	AGCT	3 cut(s)	632, 1382, 1594
Alw21I	GWGCWC	1 cut(s)	540
Alw26I	GTCTC	5 cut(s)	339, 366, 474, 519, 1084
AlwI	GGATC	3 cut(s)	360, 393, 596
AlwNI	CAGNNNCTG	1 cut(s)	1748
Ama87I	CYCGRG	1 cut(s)	447
Aor13HI	TCCGGA	1 cut(s)	1052
AoxI	GGCC	4 cut(s)	886, 1129, 1204, 1783
ApaI	GGGCCC	1 cut(s)	1208
ApeKI	GCWGC	9 cut(s)	638, 647, 650, 863, 1118, 1163, 1231, 1388, 1498
ApoI	RAATTY	3 cut(s)	660, 932, 1790
ArsI	GACNNNNNNTTYG	4 cut(s)	815, 847, 1202, 1234
AsiGI	ACCGGT	1 cut(s)	719
AspLEI	GCGC	1 cut(s)	504
AspS9I	GGNCC	8 cut(s)	43, 69, 340, 887, 1130, 1204, 1205, 1283
AsuC2I	CCSGG	5 cut(s)	448, 449, 687, 1182, 1713
AsuHPI	GGTGA	2 cut(s)	1712, 1853
AsuNHI	GCTAGC	1 cut(s)	968
AvaI	CYCGRG	1 cut(s)	447
AvaII	GGWCC	4 cut(s)	43, 69, 340, 1283
BaeGI	GKGCMC	1 cut(s)	1208
BaeI	ACNNNNGTAYC	4 cut(s)	427, 460, 1650, 1683
BanI	GGYRCC	3 cut(s)	104, 607, 1448
BanII	GRGCYC	2 cut(s)	1075, 1208
BarI	GAAGNNNNNNTAC	2 cut(s)	1011, 1043
BauI	CACGAG	1 cut(s)	84
BbsI	GAAGAC	2 cut(s)	800, 1635
Bbv12I	GWGCWC	1 cut(s)	540
BbvI	GCAGC	9 cut(s)	625, 634, 662, 850, 1105, 1150, 1218, 1400, 1510
BccI	CCATC	2 cut(s)	983, 1117
BceAI	ACGGC	2 cut(s)	442, 1414
BciT130I	CCWGG	4 cut(s)	48, 666, 891, 1160
BclI	TGATCA	1 cut(s)	433
BcnI	CCSGG	5 cut(s)	448, 449, 687, 1182, 1713
BcoDI	GTCTC	5 cut(s)	339, 366, 474, 519, 1084
BcuI	ACTAGT	1 cut(s)	671
BfaI	CTAG	7 cut(s)	300, 672, 777, 969, 1095, 1539, 1861
BfmI	CTRYAG	3 cut(s)	648, 1064, 1584
BglII	AGATCT	2 cut(s)	530, 1360
Bme1390I	CCNGG	9 cut(s)	48, 448, 449, 666, 687, 891, 1160, 1182, 1713
Bme18I	GGWCC	4 cut(s)	43, 69, 340, 1283
BmeRI	GACNNNNNGTC	1 cut(s)	67
BmeT110I	CYCGRG	1 cut(s)	447
BmgT120I	GGNCC	8 cut(s)	43, 69, 340, 887, 1130, 1204, 1205, 1283
BmiI	GGNNCC	9 cut(s)	45, 70, 71, 106, 341, 609, 1072, 1206, 1450
BmrFI	CCNGG	9 cut(s)	48, 448, 449, 666, 687, 891, 1160, 1182, 1713
BmsI	GCATC	1 cut(s)	886
BmtI	GCTAGC	1 cut(s)	972
BpiI	GAAGAC	2 cut(s)	800, 1635
Bpu10I	CCTNAGC	2 cut(s)	1467, 1595
BpuEI	CTTGAG	1 cut(s)	1220
BpuMI	CCSGG	5 cut(s)	448, 449, 687, 1182, 1713
BsaBI	GATNNNNATC	3 cut(s)	315, 357, 363
BsaI	GGTCTC	3 cut(s)	366, 519, 1084
BsaJI	CCNNGG	9 cut(s)	46, 97, 447, 665, 686, 889, 1444, 1554, 1711
BsaWI	WCCGGW	2 cut(s)	719, 1052
BsaXI	ACNNNNNCTCC	6 cut(s)	885, 915, 1062, 1092, 1820, 1850
Bse118I	RCCGGY	2 cut(s)	719, 884
Bse1I	ACTGG	1 cut(s)	740
Bse3DI	GCAATG	4 cut(s)	630, 979, 984, 1508
Bse8I	GATNNNNATC	3 cut(s)	315, 357, 363
BseAI	TCCGGA	1 cut(s)	1052
BseBI	CCWGG	4 cut(s)	48, 666, 891, 1160
BseDI	CCNNGG	9 cut(s)	46, 97, 447, 665, 686, 889, 1444, 1554, 1711
BseGI	GGATG	3 cut(s)	696, 994, 1677
BseJI	GATNNNNATC	3 cut(s)	315, 357, 363
BseMI	GCAATG	4 cut(s)	630, 979, 984, 1508
BseMII	CTCAG	6 cut(s)	146, 525, 1458, 1586, 1599, 1740
BseNI	ACTGG	1 cut(s)	740
BseRI	GAGGAG	1 cut(s)	66
BseSI	GKGCMC	1 cut(s)	1208
BseXI	GCAGC	9 cut(s)	625, 634, 662, 850, 1105, 1150, 1218, 1400, 1510
BsgI	GTGCAG	1 cut(s)	1407
Bsh1236I	CGCG	2 cut(s)	511, 1684
Bsh1285I	CGRYCG	1 cut(s)	720
BshFI	GGCC	4 cut(s)	888, 1131, 1206, 1785
BshNI	GGYRCC	3 cut(s)	104, 607, 1448
BshTI	ACCGGT	1 cut(s)	719
BsiEI	CGRYCG	1 cut(s)	720
BsiHKAI	GWGCWC	1 cut(s)	540
BsiHKCI	CYCGRG	1 cut(s)	447
BsiSI	CCGG	8 cut(s)	448, 686, 720, 885, 1053, 1181, 1713, 1786
BsiWI	CGTACG	1 cut(s)	1769
BslFI	GGGAC	9 cut(s)	55, 239, 245, 251, 299, 353, 464, 682, 1613
BsmAI	GTCTC	5 cut(s)	339, 366, 474, 519, 1084
BsmFI	GGGAC	9 cut(s)	55, 239, 245, 251, 299, 353, 464, 682, 1613
BsnI	GGCC	4 cut(s)	888, 1131, 1206, 1785
Bso31I	GGTCTC	3 cut(s)	366, 519, 1084
BsoBI	CYCGRG	1 cut(s)	447
Bsp120I	GGGCCC	1 cut(s)	1204
Bsp1286I	GDGCHC	3 cut(s)	540, 1075, 1208
Bsp13I	TCCGGA	1 cut(s)	1052
Bsp19I	CCATGG	1 cut(s)	97
BspACI	CCGC	8 cut(s)	90, 102, 376, 511, 1087, 1213, 1535, 1682
BspANI	GGCC	4 cut(s)	888, 1131, 1206, 1785
BspCNI	CTCAG	6 cut(s)	145, 526, 1459, 1585, 1600, 1741
BspEI	TCCGGA	1 cut(s)	1052
BspFNI	CGCG	2 cut(s)	511, 1684
BspHI	TCATGA	1 cut(s)	145
BspLI	GGNNCC	9 cut(s)	45, 70, 71, 106, 341, 609, 1072, 1206, 1450
BspMAI	CTGCAG	2 cut(s)	652, 1588
BspOI	GCTAGC	1 cut(s)	972
BspPI	GGATC	3 cut(s)	360, 393, 596
BspT107I	GGYRCC	3 cut(s)	104, 607, 1448
BspTNI	GGTCTC	3 cut(s)	366, 519, 1084
BsrDI	GCAATG	4 cut(s)	630, 979, 984, 1508
BsrFI	RCCGGY	2 cut(s)	719, 884
BsrI	ACTGG	1 cut(s)	740
BssAI	RCCGGY	2 cut(s)	719, 884
BssECI	CCNNGG	9 cut(s)	46, 97, 447, 665, 686, 889, 1444, 1554, 1711
BssSI	CACGAG	1 cut(s)	84
BssT1I	CCWWGG	3 cut(s)	97, 1444, 1554
Bst2BI	CACGAG	1 cut(s)	84
Bst2UI	CCWGG	4 cut(s)	48, 666, 891, 1160
Bst4CI	ACNGT	5 cut(s)	65, 119, 443, 831, 1429
Bst6I	CTCTTC	4 cut(s)	957, 1032, 1039, 1293
BstAPI	GCANNNNNTGC	1 cut(s)	614
BstC8I	GCNNGC	6 cut(s)	783, 886, 970, 1139, 1437, 1491
BstDEI	CTNAG	7 cut(s)	132, 534, 1467, 1572, 1595, 1608, 1749
BstDSI	CCRYGG	1 cut(s)	97
BstF5I	GGATG	3 cut(s)	696, 994, 1677
BstFNI	CGCG	2 cut(s)	511, 1684
BstHHI	GCGC	1 cut(s)	504
BstMAI	GTCTC	5 cut(s)	339, 366, 474, 519, 1084
BstMCI	CGRYCG	1 cut(s)	720
BstNI	CCWGG	4 cut(s)	48, 666, 891, 1160
BstNSI	RCATGY	3 cut(s)	706, 785, 1493
BstSCI	CCNGG	9 cut(s)	46, 446, 447, 664, 685, 889, 1158, 1180, 1711
BstSFI	CTRYAG	3 cut(s)	648, 1064, 1584
BstSLI	GKGCMC	1 cut(s)	1208
BstUI	CGCG	2 cut(s)	511, 1684
BstV1I	GCAGC	9 cut(s)	625, 634, 662, 850, 1105, 1150, 1218, 1400, 1510
BstV2I	GAAGAC	2 cut(s)	800, 1635
BstX2I	RGATCY	2 cut(s)	530, 1360
BstYI	RGATCY	2 cut(s)	530, 1360
BsuRI	GGCC	4 cut(s)	888, 1131, 1206, 1785
BtgI	CCRYGG	1 cut(s)	97
BtgZI	GCGATG	2 cut(s)	444, 773
BtsCI	GGATG	3 cut(s)	696, 994, 1677
BtsI	GCAGTG	2 cut(s)	879, 1821
BtsIMutI	CAGTG	5 cut(s)	124, 598, 879, 1391, 1821
Cac8I	GCNNGC	6 cut(s)	783, 886, 970, 1139, 1437, 1491
CaiI	CAGNNNCTG	1 cut(s)	1748
CciI	TCATGA	1 cut(s)	145
CfoI	GCGC	1 cut(s)	504
Cfr10I	RCCGGY	2 cut(s)	719, 884
Cfr13I	GGNCC	8 cut(s)	43, 69, 340, 887, 1130, 1204, 1205, 1283
Cfr9I	CCCGGG	1 cut(s)	447
CseI	GACGC	3 cut(s)	414, 1429, 1673
Csp6I	GTAC	5 cut(s)	25, 444, 796, 1659, 1770
CspAI	ACCGGT	1 cut(s)	719
CspCI	CAANNNNNGTGG	2 cut(s)	1540, 1575
CviQI	GTAC	5 cut(s)	25, 444, 796, 1659, 1770
DdeI	CTNAG	7 cut(s)	132, 534, 1467, 1572, 1595, 1608, 1749
DriI	GACNNNNNGTC	1 cut(s)	67
EaeI	YGGCCR	1 cut(s)	1783
Eam1104I	CTCTTC	4 cut(s)	957, 1032, 1039, 1293
Eam1105I	GACNNNNNGTC	1 cut(s)	67
EarI	CTCTTC	4 cut(s)	957, 1032, 1039, 1293
Eco130I	CCWWGG	3 cut(s)	97, 1444, 1554
Eco24I	GRGCYC	2 cut(s)	1075, 1208
Eco31I	GGTCTC	3 cut(s)	366, 519, 1084
Eco32I	GATATC	1 cut(s)	1621
Eco47I	GGWCC	4 cut(s)	43, 69, 340, 1283
Eco88I	CYCGRG	1 cut(s)	447
EcoO109I	RGGNCCY	4 cut(s)	43, 69, 1204, 1205
EcoRII	CCWGG	4 cut(s)	46, 664, 889, 1158
EcoRV	GATATC	1 cut(s)	1621
EcoT14I	CCWWGG	3 cut(s)	97, 1444, 1554
EcoT38I	GRGCYC	2 cut(s)	1075, 1208
ErhI	CCWWGG	3 cut(s)	97, 1444, 1554
FaqI	GGGAC	9 cut(s)	55, 239, 245, 251, 299, 353, 464, 682, 1613
FauI	CCCGC	1 cut(s)	1689
FbaI	TGATCA	1 cut(s)	433
FblI	GTMKAC	1 cut(s)	716
FokI	GGATG	3 cut(s)	703, 1001, 1664
FriOI	GRGCYC	2 cut(s)	1075, 1208
FspBI	CTAG	7 cut(s)	300, 672, 777, 969, 1095, 1539, 1861
GlaI	GCGC	1 cut(s)	503
HaeIII	GGCC	4 cut(s)	888, 1131, 1206, 1785
HapII	CCGG	8 cut(s)	448, 686, 720, 885, 1053, 1181, 1713, 1786
HgaI	GACGC	3 cut(s)	414, 1429, 1673
HhaI	GCGC	1 cut(s)	504
Hin6I	GCGC	1 cut(s)	502
HinP1I	GCGC	1 cut(s)	502
HincII	GTYRAC	1 cut(s)	717
HindII	GTYRAC	1 cut(s)	717
HinfI	GANTC	7 cut(s)	122, 161, 316, 452, 763, 1024, 1274
HpaII	CCGG	8 cut(s)	448, 686, 720, 885, 1053, 1181, 1713, 1786
HphI	GGTGA	2 cut(s)	1712, 1853
Hpy166II	GTNNAC	7 cut(s)	569, 717, 796, 913, 1008, 1354, 1703
Hpy188I	TCNGA	4 cut(s)	457, 535, 1155, 1828
Hpy188III	TCNNGA	7 cut(s)	146, 320, 356, 389, 546, 986, 1053
Hpy8I	GTNNAC	7 cut(s)	569, 717, 796, 913, 1008, 1354, 1703
Hpy99I	CGWCG	6 cut(s)	65, 113, 408, 425, 428, 792
HpyAV	CCTTC	8 cut(s)	11, 15, 23, 205, 459, 746, 1637, 1717
HpyCH4III	ACNGT	5 cut(s)	65, 119, 443, 831, 1429
HpyCH4IV	ACGT	3 cut(s)	559, 571, 798
HpyF3I	CTNAG	7 cut(s)	132, 534, 1467, 1572, 1595, 1608, 1749
HpySE526I	ACGT	3 cut(s)	559, 571, 798
HspAI	GCGC	1 cut(s)	502
KflI	GGGWCCC	1 cut(s)	69
Kpn2I	TCCGGA	1 cut(s)	1052
KroI	GCCGGC	1 cut(s)	884
KroNI	GCCGGC	1 cut(s)	886
Ksp22I	TGATCA	1 cut(s)	433
LmnI	GCTCC	1 cut(s)	1070
Lsp1109I	GCAGC	9 cut(s)	625, 634, 662, 850, 1105, 1150, 1218, 1400, 1510
LweI	GCATC	1 cut(s)	886
MaeI	CTAG	7 cut(s)	300, 672, 777, 969, 1095, 1539, 1861
MaeII	ACGT	3 cut(s)	559, 571, 798
MaeIII	GTNAC	3 cut(s)	555, 1369, 1579
MboII	GAAGA	7 cut(s)	156, 800, 974, 1019, 1026, 1280, 1640
MfeI	CAATTG	2 cut(s)	867, 1058
MflI	RGATCY	2 cut(s)	530, 1360
MhlI	GDGCHC	3 cut(s)	540, 1075, 1208
MluCI	AATT	8 cut(s)	660, 867, 932, 993, 1058, 1265, 1503, 1790
MlyI	GAGTC	3 cut(s)	446, 757, 1018
MmeI	TCCRAC	1 cut(s)	781
MroI	TCCGGA	1 cut(s)	1052
MroNI	GCCGGC	1 cut(s)	884
MseI	TTAA	3 cut(s)	1080, 1404, 1568
MslI	CAYNNNNRTG	3 cut(s)	102, 150, 1406
MspI	CCGG	8 cut(s)	448, 686, 720, 885, 1053, 1181, 1713, 1786
MspR9I	CCNGG	9 cut(s)	48, 448, 449, 666, 687, 891, 1160, 1182, 1713
MunI	CAATTG	2 cut(s)	867, 1058
MvaI	CCWGG	4 cut(s)	48, 666, 891, 1160
MvnI	CGCG	2 cut(s)	511, 1684
NaeI	GCCGGC	1 cut(s)	886
NciI	CCSGG	5 cut(s)	448, 449, 687, 1182, 1713
NcoI	CCATGG	1 cut(s)	97
NgoMIV	GCCGGC	1 cut(s)	884
NheI	GCTAGC	1 cut(s)	968
NlaIV	GGNNCC	9 cut(s)	45, 70, 71, 106, 341, 609, 1072, 1206, 1450
NmeAIII	GCCGAG	1 cut(s)	1107
NmuCI	GTSAC	1 cut(s)	555
NspI	RCATGY	3 cut(s)	706, 785, 1493
PaeI	GCATGC	2 cut(s)	785, 1493
PagI	TCATGA	1 cut(s)	145
PciI	ACATGT	1 cut(s)	702
PcsI	WCGNNNNNNNCGW	1 cut(s)	426
PdiI	GCCGGC	1 cut(s)	886
PfeI	GAWTC	4 cut(s)	122, 161, 316, 1274
Pfl23II	CGTACG	1 cut(s)	1769
PflMI	CCANNNNNTGG	1 cut(s)	859
PinAI	ACCGGT	1 cut(s)	719
PleI	GAGTC	3 cut(s)	446, 757, 1018
PpsI	GAGTC	3 cut(s)	446, 757, 1018
PpuMI	RGGWCCY	2 cut(s)	43, 69
PscI	ACATGT	1 cut(s)	702
Psp5II	RGGWCCY	2 cut(s)	43, 69
Psp6I	CCWGG	4 cut(s)	46, 664, 889, 1158
PspGI	CCWGG	4 cut(s)	46, 664, 889, 1158
PspLI	CGTACG	1 cut(s)	1769
PspN4I	GGNNCC	9 cut(s)	45, 70, 71, 106, 341, 609, 1072, 1206, 1450
PspOMI	GGGCCC	1 cut(s)	1204
PspPI	GGNCC	8 cut(s)	43, 69, 340, 887, 1130, 1204, 1205, 1283
PspPPI	RGGWCCY	2 cut(s)	43, 69
PstI	CTGCAG	2 cut(s)	652, 1588
PstNI	CAGNNNCTG	1 cut(s)	1748
PsuI	RGATCY	2 cut(s)	530, 1360
RsaI	GTAC	5 cut(s)	26, 445, 797, 1660, 1771
RsaNI	GTAC	5 cut(s)	25, 444, 796, 1659, 1770
RseI	CAYNNNNRTG	3 cut(s)	102, 150, 1406
SalI	GTCGAC	1 cut(s)	715
SaqAI	TTAA	3 cut(s)	1080, 1404, 1568
Sau96I	GGNCC	8 cut(s)	43, 69, 340, 887, 1130, 1204, 1205, 1283
SchI	GAGTC	3 cut(s)	446, 757, 1018
ScrFI	CCNGG	9 cut(s)	48, 448, 449, 666, 687, 891, 1160, 1182, 1713
SduI	GDGCHC	3 cut(s)	540, 1075, 1208
SfaNI	GCATC	1 cut(s)	886
SfcI	CTRYAG	3 cut(s)	648, 1064, 1584
SinI	GGWCC	4 cut(s)	43, 69, 340, 1283
SmaI	CCCGGG	1 cut(s)	449
SmiMI	CAYNNNNRTG	3 cut(s)	102, 150, 1406
SmlI	CTYRAG	1 cut(s)	1199
SmoI	CTYRAG	1 cut(s)	1199
SpeI	ACTAGT	1 cut(s)	671
SphI	GCATGC	2 cut(s)	785, 1493
Sse9I	AATT	8 cut(s)	660, 867, 932, 993, 1058, 1265, 1503, 1790
SsiI	CCGC	8 cut(s)	90, 102, 376, 511, 1087, 1213, 1535, 1682
SspMI	CTAG	7 cut(s)	300, 672, 777, 969, 1095, 1539, 1861
StyD4I	CCNGG	9 cut(s)	46, 446, 447, 664, 685, 889, 1158, 1180, 1711
StyI	CCWWGG	3 cut(s)	97, 1444, 1554
TaaI	ACNGT	5 cut(s)	65, 119, 443, 831, 1429
TaiI	ACGT	3 cut(s)	562, 574, 801
TaqI	TCGA	1 cut(s)	716
TaqII	GACCGA	1 cut(s)	357
TasI	AATT	8 cut(s)	660, 867, 932, 993, 1058, 1265, 1503, 1790
TauI	GCSGC	1 cut(s)	92
TfiI	GAWTC	4 cut(s)	122, 161, 316, 1274
Tru1I	TTAA	3 cut(s)	1080, 1404, 1568
Tru9I	TTAA	3 cut(s)	1080, 1404, 1568
TscAI	CASTG	5 cut(s)	124, 598, 886, 1398, 1821
TseFI	GTSAC	1 cut(s)	555
TseI	GCWGC	9 cut(s)	638, 647, 650, 863, 1118, 1163, 1231, 1388, 1498
Tsp45I	GTSAC	1 cut(s)	555
TspDTI	ATGAA	4 cut(s)	153, 840, 939, 1510
TspGWI	ACGGA	2 cut(s)	23, 51
TspMI	CCCGGG	1 cut(s)	447
TspRI	CASTG	5 cut(s)	124, 598, 886, 1398, 1821
Van91I	CCANNNNNTGG	1 cut(s)	859
VpaK11BI	GGWCC	4 cut(s)	43, 69, 340, 1283
XapI	RAATTY	3 cut(s)	660, 932, 1790
XceI	RCATGY	3 cut(s)	706, 785, 1493
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1156
XmaI	CCCGGG	1 cut(s)	447
XmiI	GTMKAC	1 cut(s)	716
XspI	CTAG	7 cut(s)	300, 672, 777, 969, 1095, 1539, 1861

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.