Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0003223

Physical Location & Seq

Genomic Coordinates Reverse (-)

13022853 .. 13027783

Gene Structure 4931 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000017126

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1779 bp

ATGGCCGACTACGAAGGAAGGTACGACGGTAACGGAGAGGACGCTGACGGCTCCTCTCCCCAACCGCGGAGCACTAACCATGGCGGTCTCGACGATTACAACGATTCCAAATCTCAGCATTCCCGTGATTATGAGAGAGAATCTTCAAAGAGTAGAGAAAAGGAAAGAGAAAAGGGGCGCGATAAGGAGAGGGACAGGGACAGAGATCGGGAGAGAGATAGGGATAGGGAGAGGGACAGGGACAGAGGGAGAAGCAAGGATAAAGATAGAGAGAGGGACAGAGACAGGGGTAGGGATAGGGAACGAGAAAGGGACAGAGACAGGGATCATGATCGTCATCATAGAGACCGCCACAGGGATCGTGAAAGGAGTGAGCGAAGGAGAGATAAGGATGATGATGATGATGAGGATCACTACCGTAGCCGCGACCGTGATAGGCGGAGGGATTATGACAGAGACAGGGAGGATAGGCATAGGCGCAGGTCTCGTTCCAGGGGTCGGTCTGAGCATAAATCCAGATCAAGGTCGCGTTCACGCTCACGTTCCAAAAGCAAAAGAATTAGCGGTTTTGACATGGCGCCTCCTGCTTCTGCACTATTACCTGGTGCTGCTGTTCCTGTGACAGGCCAGATTCCTGGAGCTACTCCAACCATTCCTGGGATGTTCCCAAACATGTTCCCTTTGGCGACTGGCCAGCAGTTTGGAGCACTTCCAGTTATGCCTGTGCAGGCAATGACTCAACAGGCTACTAGGCATGCCCGGAGGGTGTATGTTGGAGGGCTTCCCCCTACAGCAAATGAACAGTCGGTTGCTACATTTTTCAGCCATGTAATGCATGCTATTGGAGGGAACACTGCTGGCCCAGGAGATGCTGTTGTTAATGTTTACATCAACCATGAAAAAAAATTTGCCTTTGTGGAGATGAGATCTGTGGAAGAGGCCAGCAATGCAATGGCTTTGGATGGGATTATTTTTGAGGGTGCCCCTGTTAAGGTTAGGAGACCTAGTGACTACAACCCATCTCTTGCTGCAACACTTGGTCCAAGCCAGCCCAGTCCAAATCTGAACTTGGCTAATGTTGGCCTGACACCAGGTTCTGCTGGTGGCCTTGAGGGACCTGATCGCATTTTTGTTGGTGGTCTACCCTATTACTTTACAGAAGTACAGATCAAGGAGTTGCTCGAGTCTTTTGGACCCCTCCGTGGTTTTGATCTAGTGAAAGATAGGGAAACAGGAAACTCAAAAGGTTATGCCTTTTGTGTTTACCAAGATCTTTCAGTTACTGACATAGCCTGTGCAGCACTGAATGGGATTAAAATGGGAGACAAGACCCTCACGGTCAGGCGTGCTAATCAAGGTGCCAACCAGCCAAAACCTGAACAAGAGAGTGTTTTGTTGCATGCACAGCAGCAAATTGCATTGCAGAGGTTCCTGTTGTTGCAACAGCCTGCTTCGGTGGCCACCAAAGTTGTATGCTTAACACAAGTAGTTACAGAGGATGAGCTGAAGGATGATCTTGAGTATGAAGACATAGTGGAAGATATGAAGCAAGAGGGCGAGAAATTTGGTTCACTTGTGAGCGTCATCATTCCACGTCCACGACCAGATGGTCAACCCTCACCTGGAGTTGGAAAGGTGTTTTTGGAGTATGCGGATGTTGATGGTTCCACAAAAGCCCGTACAGGGATGAATGGCAGGAAATTTGGTGGGAATCCAGTTGTGGCAGTGTTTTATCCGGAGGACAAGTTTGCCCAGGGTGACTATGACGCTAGTTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000243 GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008187 GO:0008380 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0030628 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0036002 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0050896 GO:0051704 GO:0051707 GO:0070013 GO:0071004 GO:0071010 GO:0071704 GO:0089701 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1

Protein Analysis

593

Amino Acids

66.69

Weight (kDa)

7.72

Isoelectric Point (pI)

55.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	376 - 445	6.1e-17	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003223)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60900 AT4G36690 AT4G36690 AT4G36690 AT4G36690
fragaria_vesca	FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g18180
malus_domestica	MD02G1151300.v1.1 MD15G1265800.v1.1
prunus_persica	Prupe.7G151700_v2.0.a1 Prupe.7G151700_v2.0.a1 Prupe.7G151700_v2.0.a1
pyrus_communis	pycom15g23150
rosa_chinensis	RchiOBHm_Chr2g0102011 RchiOBHm_Chr7g0198161
rosa_laevigata	RLG00000017126
rosa_multiflora	Rmu_co8319619.1_g000001 Rmu_sc0000157.1_g000005 Rmu_sc0001167.1_g000028
rosa_roxburghii	Rroxscaffold_2G00140830
rosa_rugosa	Rorug02G0103800 Rorug02G0103900 Rorug02G0104000
rosa_samantha	Rh2AG152000 Rh2BG157400 Rh2CG157400 Rh2DG157500
rosa_wichuraiana	Rw0G008320 Rw2G011870 Rw4G020950 Rw5G047310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1608
Acc36I	ACCTGC	1 cut(s)	471
AccB1I	GGYRCC	3 cut(s)	577, 980, 1358
AccI	GTMKAC	1 cut(s)	1141
AccII	CGCG	4 cut(s)	67, 180, 426, 529
AccIII	TCCGGA	1 cut(s)	1735
AciI	CCGC	8 cut(s)	65, 67, 84, 349, 424, 439, 564, 1652
AclWI	GGATC	3 cut(s)	333, 366, 417
AcoI	YGGCCR	3 cut(s)	3, 691, 1458
AcsI	RAATTY	3 cut(s)	905, 1562, 1700
AcuI	CTGAAG	1 cut(s)	1526
AcyI	GRCGYC	1 cut(s)	578
AfaI	GTAC	3 cut(s)	23, 1164, 1681
AflIII	ACRYGT	1 cut(s)	672
AgsI	TTSAA	1 cut(s)	147
AjiI	CACGTC	1 cut(s)	1595
AjnI	CCWGG	8 cut(s)	491, 601, 634, 655, 862, 1090, 1621, 1752
AluBI	AGCT	2 cut(s)	641, 1504
AluI	AGCT	2 cut(s)	641, 1504
Alw21I	GWGCWC	2 cut(s)	74, 709
Alw26I	GTCTC	8 cut(s)	92, 276, 312, 339, 450, 489, 994, 1317
AlwI	GGATC	3 cut(s)	333, 366, 417
AlwNI	CAGNNNCTG	2 cut(s)	1097, 1283
Ama87I	CYCGRG	1 cut(s)	1181
Aor13HI	TCCGGA	1 cut(s)	1735
AoxI	GGCC	8 cut(s)	3, 625, 691, 859, 939, 1081, 1105, 1458
ApeKI	GCWGC	4 cut(s)	608, 1028, 1298, 1408
ApoI	RAATTY	3 cut(s)	905, 1562, 1700
ArsI	GACNNNNNNTTYG	2 cut(s)	788, 820
AspLEI	GCGC	3 cut(s)	180, 480, 580
AspS9I	GGNCC	4 cut(s)	860, 1040, 1115, 1193
AsuC2I	CCSGG	1 cut(s)	760
AsuHPI	GGTGA	2 cut(s)	1611, 1769
AvaI	CYCGRG	1 cut(s)	1181
AvaII	GGWCC	3 cut(s)	1040, 1115, 1193
BaeGI	GKGCMC	1 cut(s)	985
BaeI	ACNNNNGTAYC	2 cut(s)	13, 46
BalI	TGGCCA	2 cut(s)	693, 1460
BanI	GGYRCC	3 cut(s)	577, 980, 1358
BbsI	GAAGAC	1 cut(s)	1533
Bbv12I	GWGCWC	2 cut(s)	74, 709
BbvI	GCAGC	4 cut(s)	595, 1015, 1310, 1420
BccI	CCATC	4 cut(s)	956, 1027, 1601, 1655
BceAI	ACGGC	1 cut(s)	64
BciT130I	CCWGG	8 cut(s)	493, 603, 636, 657, 864, 1092, 1623, 1754
BcnI	CCSGG	1 cut(s)	760
BcoDI	GTCTC	8 cut(s)	92, 276, 312, 339, 450, 489, 994, 1317
BfaI	CTAG	5 cut(s)	750, 1005, 1214, 1770, 1777
BfmI	CTRYAG	1 cut(s)	789
BfoI	RGCGCY	1 cut(s)	581
BfuAI	ACCTGC	1 cut(s)	471
BglII	AGATCT	2 cut(s)	926, 1270
BisI	GCNGC	5 cut(s)	424, 609, 1029, 1299, 1409
BlsI	GCNGC	5 cut(s)	425, 610, 1030, 1300, 1410
Bme1390I	CCNGG	9 cut(s)	493, 603, 636, 657, 760, 864, 1092, 1623, 1754
Bme18I	GGWCC	3 cut(s)	1040, 1115, 1193
BmeT110I	CYCGRG	1 cut(s)	1181
BmgBI	CACGTC	1 cut(s)	1595
BmgT120I	GGNCC	4 cut(s)	860, 1040, 1115, 1193
BmiI	GGNNCC	8 cut(s)	52, 579, 982, 1116, 1195, 1360, 1430, 1666
BmrFI	CCNGG	9 cut(s)	493, 603, 636, 657, 760, 864, 1092, 1623, 1754
BmrI	ACTGGG	1 cut(s)	1047
BmsI	GCATC	1 cut(s)	859
BmuI	ACTGGG	1 cut(s)	1047
BpiI	GAAGAC	1 cut(s)	1533
BpmI	CTGGAG	2 cut(s)	657, 1644
BpuEI	CTTGAG	2 cut(s)	1130, 1538
BpuMI	CCSGG	1 cut(s)	760
BsaBI	GATNNNNATC	3 cut(s)	330, 336, 408
BsaHI	GRCGYC	1 cut(s)	578
BsaI	GGTCTC	4 cut(s)	92, 339, 489, 994
BsaJI	CCNNGG	8 cut(s)	65, 79, 492, 656, 862, 1201, 1752, 1753
BsaWI	WCCGGW	1 cut(s)	1735
BsaXI	ACNNNNNCTCC	6 cut(s)	858, 888, 991, 1021, 1730, 1760
Bse1I	ACTGG	4 cut(s)	694, 713, 1053, 1715
Bse3DI	GCAATG	4 cut(s)	738, 952, 957, 1418
Bse8I	GATNNNNATC	3 cut(s)	330, 336, 408
BseAI	TCCGGA	1 cut(s)	1735
BseBI	CCWGG	8 cut(s)	493, 603, 636, 657, 864, 1092, 1623, 1754
BseDI	CCNNGG	8 cut(s)	65, 79, 492, 656, 862, 1201, 1752, 1753
BseGI	GGATG	7 cut(s)	397, 666, 967, 1504, 1516, 1660, 1692
BseJI	GATNNNNATC	3 cut(s)	330, 336, 408
BseMI	GCAATG	4 cut(s)	738, 952, 957, 1418
BseMII	CTCAG	2 cut(s)	128, 495
BseNI	ACTGG	4 cut(s)	694, 713, 1053, 1715
BseRI	GAGGAG	1 cut(s)	43
BseSI	GKGCMC	1 cut(s)	985
BseXI	GCAGC	4 cut(s)	595, 1015, 1310, 1420
BsgI	GTGCAG	3 cut(s)	576, 746, 1317
Bsh1236I	CGCG	4 cut(s)	67, 180, 426, 529
Bsh1285I	CGRYCG	1 cut(s)	430
BshFI	GGCC	8 cut(s)	5, 627, 693, 861, 941, 1083, 1107, 1460
BshNI	GGYRCC	3 cut(s)	577, 980, 1358
BsiEI	CGRYCG	1 cut(s)	430
BsiHKAI	GWGCWC	2 cut(s)	74, 709
BsiHKCI	CYCGRG	1 cut(s)	1181
BsiSI	CCGG	2 cut(s)	760, 1736
BslFI	GGGAC	7 cut(s)	206, 212, 248, 254, 290, 326, 1128
BsmAI	GTCTC	8 cut(s)	92, 276, 312, 339, 450, 489, 994, 1317
BsmFI	GGGAC	7 cut(s)	206, 212, 248, 254, 290, 326, 1128
BsmI	GAATGC	1 cut(s)	118
BsnI	GGCC	8 cut(s)	5, 627, 693, 861, 941, 1083, 1107, 1460
Bso31I	GGTCTC	4 cut(s)	92, 339, 489, 994
BsoBI	CYCGRG	1 cut(s)	1181
Bsp1286I	GDGCHC	3 cut(s)	74, 709, 985
Bsp13I	TCCGGA	1 cut(s)	1735
Bsp19I	CCATGG	1 cut(s)	79
BspACI	CCGC	8 cut(s)	65, 67, 84, 349, 424, 439, 564, 1652
BspANI	GGCC	8 cut(s)	5, 627, 693, 861, 941, 1083, 1107, 1460
BspCNI	CTCAG	2 cut(s)	127, 496
BspEI	TCCGGA	1 cut(s)	1735
BspFNI	CGCG	4 cut(s)	67, 180, 426, 529
BspHI	TCATGA	1 cut(s)	328
BspLI	GGNNCC	8 cut(s)	52, 579, 982, 1116, 1195, 1360, 1430, 1666
BspMI	ACCTGC	1 cut(s)	471
BspPI	GGATC	3 cut(s)	333, 366, 417
BspT107I	GGYRCC	3 cut(s)	577, 980, 1358
BspTNI	GGTCTC	4 cut(s)	92, 339, 489, 994
BsrDI	GCAATG	4 cut(s)	738, 952, 957, 1418
BsrI	ACTGG	4 cut(s)	694, 713, 1053, 1715
BssECI	CCNNGG	8 cut(s)	65, 79, 492, 656, 862, 1201, 1752, 1753
BssNI	GRCGYC	1 cut(s)	578
BssT1I	CCWWGG	1 cut(s)	79
Bst2UI	CCWGG	8 cut(s)	493, 603, 636, 657, 864, 1092, 1623, 1754
Bst4CI	ACNGT	5 cut(s)	29, 419, 431, 804, 1339
Bst6I	CTCTTC	1 cut(s)	930
BstACI	GRCGYC	1 cut(s)	578
BstDEI	CTNAG	2 cut(s)	114, 504
BstDSI	CCRYGG	3 cut(s)	65, 79, 1201
BstENI	CCTNNNNNAGG	1 cut(s)	621
BstF5I	GGATG	7 cut(s)	397, 666, 967, 1504, 1516, 1660, 1692
BstFNI	CGCG	4 cut(s)	67, 180, 426, 529
BstH2I	RGCGCY	1 cut(s)	581
BstHHI	GCGC	3 cut(s)	180, 480, 580
BstMAI	GTCTC	8 cut(s)	92, 276, 312, 339, 450, 489, 994, 1317
BstMCI	CGRYCG	1 cut(s)	430
BstMWI	GCNNNNNNNGC	5 cut(s)	584, 947, 1298, 1405, 1457
BstNI	CCWGG	8 cut(s)	493, 603, 636, 657, 864, 1092, 1623, 1754
BstNSI	RCATGY	4 cut(s)	676, 758, 839, 1403
BstSCI	CCNGG	9 cut(s)	491, 601, 634, 655, 758, 862, 1090, 1621, 1752
BstSFI	CTRYAG	1 cut(s)	789
BstSLI	GKGCMC	1 cut(s)	985
BstUI	CGCG	4 cut(s)	67, 180, 426, 529
BstV1I	GCAGC	4 cut(s)	595, 1015, 1310, 1420
BstV2I	GAAGAC	1 cut(s)	1533
BstX2I	RGATCY	2 cut(s)	926, 1270
BstXI	CCANNNNNNTGG	2 cut(s)	635, 701
BstYI	RGATCY	2 cut(s)	926, 1270
BsuRI	GGCC	8 cut(s)	5, 627, 693, 861, 941, 1083, 1107, 1460
BtgI	CCRYGG	3 cut(s)	65, 79, 1201
BtrI	CACGTC	1 cut(s)	1595
BtsCI	GGATG	7 cut(s)	397, 666, 967, 1504, 1516, 1660, 1692
BtsI	GCAGTG	2 cut(s)	852, 1731
BtsIMutI	CAGTG	3 cut(s)	852, 1301, 1731
BveI	ACCTGC	1 cut(s)	471
CaiI	CAGNNNCTG	2 cut(s)	1097, 1283
CciI	TCATGA	1 cut(s)	328
CfoI	GCGC	3 cut(s)	180, 480, 580
Cfr13I	GGNCC	4 cut(s)	860, 1040, 1115, 1193
Cfr42I	CCGCGG	1 cut(s)	68
CseI	GACGC	2 cut(s)	50, 1570
CsiI	ACCWGGT	2 cut(s)	601, 1090
Csp6I	GTAC	3 cut(s)	22, 1163, 1680
CspCI	CAANNNNNGTGG	2 cut(s)	1450, 1485
CviAII	CATG	9 cut(s)	80, 329, 574, 673, 755, 827, 836, 896, 1400
CviQI	GTAC	3 cut(s)	22, 1163, 1680
DdeI	CTNAG	2 cut(s)	114, 504
DinI	GGCGCC	1 cut(s)	579
DrdI	GACNNNNNNGTC	1 cut(s)	1608
DseDI	GACNNNNNNGTC	1 cut(s)	1608
EaeI	YGGCCR	3 cut(s)	3, 691, 1458
Eam1104I	CTCTTC	1 cut(s)	930
EarI	CTCTTC	1 cut(s)	930
EciI	GGCGGA	1 cut(s)	454
Eco130I	CCWWGG	1 cut(s)	79
Eco31I	GGTCTC	4 cut(s)	92, 339, 489, 994
Eco47I	GGWCC	3 cut(s)	1040, 1115, 1193
Eco57I	CTGAAG	1 cut(s)	1526
Eco88I	CYCGRG	1 cut(s)	1181
EcoNI	CCTNNNNNAGG	1 cut(s)	621
EcoO109I	RGGNCCY	1 cut(s)	1115
EcoRII	CCWGG	8 cut(s)	491, 601, 634, 655, 862, 1090, 1621, 1752
EcoT14I	CCWWGG	1 cut(s)	79
EcoT22I	ATGCAT	1 cut(s)	837
EgeI	GGCGCC	1 cut(s)	579
EheI	GGCGCC	1 cut(s)	579
ErhI	CCWWGG	1 cut(s)	79
FaeI	CATG	9 cut(s)	83, 332, 577, 676, 758, 830, 839, 899, 1403
FaqI	GGGAC	7 cut(s)	206, 212, 248, 254, 290, 326, 1128
FatI	CATG	9 cut(s)	79, 328, 573, 672, 754, 826, 835, 895, 1399
FblI	GTMKAC	1 cut(s)	1141
Fnu4HI	GCNGC	5 cut(s)	424, 609, 1029, 1299, 1409
FokI	GGATG	7 cut(s)	404, 673, 974, 1511, 1523, 1667, 1699
Fsp4HI	GCNGC	5 cut(s)	424, 609, 1029, 1299, 1409
FspBI	CTAG	5 cut(s)	750, 1005, 1214, 1770, 1777
GlaI	GCGC	3 cut(s)	179, 479, 579
GluI	GCNGC	5 cut(s)	424, 609, 1029, 1299, 1409
GsuI	CTGGAG	2 cut(s)	657, 1644
HaeII	RGCGCY	1 cut(s)	581
HaeIII	GGCC	8 cut(s)	5, 627, 693, 861, 941, 1083, 1107, 1460
HapII	CCGG	2 cut(s)	760, 1736
HgaI	GACGC	2 cut(s)	50, 1570
HhaI	GCGC	3 cut(s)	180, 480, 580
Hin1I	GRCGYC	1 cut(s)	578
Hin1II	CATG	9 cut(s)	83, 332, 577, 676, 758, 830, 839, 899, 1403
Hin6I	GCGC	3 cut(s)	178, 478, 578
HinP1I	GCGC	3 cut(s)	178, 478, 578
HincII	GTYRAC	1 cut(s)	1613
HindII	GTYRAC	1 cut(s)	1613
HinfI	GANTC	6 cut(s)	104, 140, 631, 736, 1184, 1711
HpaII	CCGG	2 cut(s)	760, 1736
HphI	GGTGA	2 cut(s)	1611, 1769
Hpy166II	GTNNAC	7 cut(s)	533, 886, 1142, 1264, 1571, 1598, 1613
Hpy188I	TCNGA	2 cut(s)	505, 1065
Hpy188III	TCNNGA	7 cut(s)	89, 209, 329, 362, 516, 1517, 1736
Hpy8I	GTNNAC	7 cut(s)	533, 886, 1142, 1264, 1571, 1598, 1613
Hpy99I	CGWCG	2 cut(s)	29, 95
HpyAV	CCTTC	4 cut(s)	8, 12, 372, 1501
HpyCH4III	ACNGT	5 cut(s)	29, 419, 431, 804, 1339
HpyCH4IV	ACGT	2 cut(s)	541, 1594
HpyF10VI	GCNNNNNNNGC	5 cut(s)	584, 947, 1298, 1405, 1457
HpyF3I	CTNAG	2 cut(s)	114, 504
HpySE526I	ACGT	2 cut(s)	541, 1594
Hsp92I	GRCGYC	1 cut(s)	578
Hsp92II	CATG	9 cut(s)	83, 332, 577, 676, 758, 830, 839, 899, 1403
HspAI	GCGC	3 cut(s)	178, 478, 578
KasI	GGCGCC	1 cut(s)	577
Kpn2I	TCCGGA	1 cut(s)	1735
KspI	CCGCGG	1 cut(s)	68
LmnI	GCTCC	4 cut(s)	56, 69, 638, 704
Lsp1109I	GCAGC	4 cut(s)	595, 1015, 1310, 1420
LweI	GCATC	1 cut(s)	859
MabI	ACCWGGT	2 cut(s)	601, 1090
MaeI	CTAG	5 cut(s)	750, 1005, 1214, 1770, 1777
MaeII	ACGT	2 cut(s)	541, 1594
MaeIII	GTNAC	6 cut(s)	29, 619, 1007, 1279, 1489, 1757
MboII	GAAGA	4 cut(s)	135, 947, 1538, 1550
MflI	RGATCY	2 cut(s)	926, 1270
MhlI	GDGCHC	3 cut(s)	74, 709, 985
MlsI	TGGCCA	2 cut(s)	693, 1460
MluCI	AATT	5 cut(s)	558, 905, 1413, 1562, 1700
MluNI	TGGCCA	2 cut(s)	693, 1460
Mly113I	GGCGCC	1 cut(s)	578
MlyI	GAGTC	2 cut(s)	730, 1193
MmeI	TCCRAC	3 cut(s)	671, 754, 1609
Mox20I	TGGCCA	2 cut(s)	693, 1460
Mph1103I	ATGCAT	1 cut(s)	837
MroI	TCCGGA	1 cut(s)	1735
MscI	TGGCCA	2 cut(s)	693, 1460
MseI	TTAA	4 cut(s)	879, 990, 1314, 1478
MslI	CAYNNNNRTG	1 cut(s)	123
Msp20I	TGGCCA	2 cut(s)	693, 1460
MspA1I	CMGCKG	1 cut(s)	67
MspI	CCGG	2 cut(s)	760, 1736
MspR9I	CCNGG	9 cut(s)	493, 603, 636, 657, 760, 864, 1092, 1623, 1754
Mva1269I	GAATGC	1 cut(s)	118
MvaI	CCWGG	8 cut(s)	493, 603, 636, 657, 864, 1092, 1623, 1754
MvnI	CGCG	4 cut(s)	67, 180, 426, 529
MwoI	GCNNNNNNNGC	5 cut(s)	584, 947, 1298, 1405, 1457
NarI	GGCGCC	1 cut(s)	578
NciI	CCSGG	1 cut(s)	760
NcoI	CCATGG	1 cut(s)	79
NlaIII	CATG	9 cut(s)	83, 332, 577, 676, 758, 830, 839, 899, 1403
NlaIV	GGNNCC	8 cut(s)	52, 579, 982, 1116, 1195, 1360, 1430, 1666
NmuCI	GTSAC	3 cut(s)	619, 1007, 1757
NsiI	ATGCAT	1 cut(s)	837
NspI	RCATGY	4 cut(s)	676, 758, 839, 1403
PaeI	GCATGC	3 cut(s)	758, 839, 1403
PaeR7I	CTCGAG	1 cut(s)	1181
PagI	TCATGA	1 cut(s)	328
PasI	CCCWGGG	1 cut(s)	1753
PciI	ACATGT	1 cut(s)	672
PcsI	WCGNNNNNNNCGW	1 cut(s)	99
PctI	GAATGC	1 cut(s)	118
PfeI	GAWTC	4 cut(s)	104, 140, 631, 1711
PfoI	TCCNGGA	1 cut(s)	634
PkrI	GCNGC	5 cut(s)	425, 610, 1030, 1300, 1410
PleI	GAGTC	2 cut(s)	730, 1192
PluTI	GGCGCC	1 cut(s)	581
PpsI	GAGTC	2 cut(s)	730, 1192
PpuMI	RGGWCCY	1 cut(s)	1115
PscI	ACATGT	1 cut(s)	672
Psp5II	RGGWCCY	1 cut(s)	1115
Psp6I	CCWGG	8 cut(s)	491, 601, 634, 655, 862, 1090, 1621, 1752
PspGI	CCWGG	8 cut(s)	491, 601, 634, 655, 862, 1090, 1621, 1752
PspN4I	GGNNCC	8 cut(s)	52, 579, 982, 1116, 1195, 1360, 1430, 1666
PspPI	GGNCC	4 cut(s)	860, 1040, 1115, 1193
PspPPI	RGGWCCY	1 cut(s)	1115
PspXI	VCTCGAGB	1 cut(s)	1181
PstNI	CAGNNNCTG	2 cut(s)	1097, 1283
PsuI	RGATCY	2 cut(s)	926, 1270
RsaI	GTAC	3 cut(s)	23, 1164, 1681
RsaNI	GTAC	3 cut(s)	22, 1163, 1680
RseI	CAYNNNNRTG	1 cut(s)	123
SacII	CCGCGG	1 cut(s)	68
SaqAI	TTAA	4 cut(s)	879, 990, 1314, 1478
SatI	GCNGC	5 cut(s)	424, 609, 1029, 1299, 1409
Sau96I	GGNCC	4 cut(s)	860, 1040, 1115, 1193
SchI	GAGTC	2 cut(s)	730, 1193
ScrFI	CCNGG	9 cut(s)	493, 603, 636, 657, 760, 864, 1092, 1623, 1754
SduI	GDGCHC	3 cut(s)	74, 709, 985
SexAI	ACCWGGT	2 cut(s)	601, 1090
SfaNI	GCATC	1 cut(s)	859
SfcI	CTRYAG	1 cut(s)	789
SfoI	GGCGCC	1 cut(s)	579
Sfr274I	CTCGAG	1 cut(s)	1181
Sfr303I	CCGCGG	1 cut(s)	68
SgrBI	CCGCGG	1 cut(s)	68
SinI	GGWCC	3 cut(s)	1040, 1115, 1193
SlaI	CTCGAG	1 cut(s)	1181
SmiMI	CAYNNNNRTG	1 cut(s)	123
SmlI	CTYRAG	3 cut(s)	1109, 1181, 1517
SmoI	CTYRAG	3 cut(s)	1109, 1181, 1517
SphI	GCATGC	3 cut(s)	758, 839, 1403
Sse9I	AATT	5 cut(s)	558, 905, 1413, 1562, 1700
SsiI	CCGC	8 cut(s)	65, 67, 84, 349, 424, 439, 564, 1652
SspDI	GGCGCC	1 cut(s)	577
SspMI	CTAG	5 cut(s)	750, 1005, 1214, 1770, 1777
StyD4I	CCNGG	9 cut(s)	491, 601, 634, 655, 758, 862, 1090, 1621, 1752
StyI	CCWWGG	1 cut(s)	79
TaaI	ACNGT	5 cut(s)	29, 419, 431, 804, 1339
TaiI	ACGT	2 cut(s)	544, 1597
TaqI	TCGA	2 cut(s)	90, 1182
TaqII	GACCGA	1 cut(s)	489
TasI	AATT	5 cut(s)	558, 905, 1413, 1562, 1700
TatI	WGTACW	1 cut(s)	1162
TauI	GCSGC	1 cut(s)	426
TfiI	GAWTC	4 cut(s)	104, 140, 631, 1711
Tru1I	TTAA	4 cut(s)	879, 990, 1314, 1478
Tru9I	TTAA	4 cut(s)	879, 990, 1314, 1478
TscAI	CASTG	3 cut(s)	859, 1308, 1731
TseFI	GTSAC	3 cut(s)	619, 1007, 1757
TseI	GCWGC	4 cut(s)	608, 1028, 1298, 1408
Tsp45I	GTSAC	3 cut(s)	619, 1007, 1757
TspDTI	ATGAA	5 cut(s)	813, 912, 1539, 1559, 1703
TspGWI	ACGGA	2 cut(s)	48, 1190
TspRI	CASTG	3 cut(s)	859, 1308, 1731
VpaK11BI	GGWCC	3 cut(s)	1040, 1115, 1193
XagI	CCTNNNNNAGG	1 cut(s)	621
XapI	RAATTY	3 cut(s)	905, 1562, 1700
XceI	RCATGY	4 cut(s)	676, 758, 839, 1403
XcmI	CCANNNNNNNNNTGG	1 cut(s)	949
XhoI	CTCGAG	1 cut(s)	1181
XmiI	GTMKAC	1 cut(s)	1141
XspI	CTAG	5 cut(s)	750, 1005, 1214, 1770, 1777
Zsp2I	ATGCAT	1 cut(s)	837

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.