AT1G76510

domain-containing protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
28708339 .. 28712968
4630 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G76510.4

Sequence Viewer

Length: 1305 bp
ATGATGGCGGATACTGAAATGCAAGAGCAAGATGTGCCGTCTGGTACCAAAGGTGTTGTAGAGGAGCCTTCAGAACTAGAGAAAGACCTAAACTCTATTGAAAGACCTAAGTCCCCTGTTCCAGAGGATACGACTCATACTTTGGATAGTGATGTTCATTTATCTGATGCTCCCATTGCTAATCAAATTGAGGCTAATGAAGAGGTTGGTGGTCAGAACAGTGTTGATGGGAGGAATGGTGATGTTGATCAGTCTGAAAAGAAGATTACTAGTGATGGCGGTCAAGAGGAGACAACACTTGGGGAATCAAATCCTTTGAAGGGGGATCCGTCGAGTCCTCATGTTCCTGAAGAAAGTGTTAAGAAGTGGAAGACATGGTTGTTGAGTGATGCTGAGGCCAGGGAAGTTGATGAAGCAGGGGCACCACAGGATCAAGAGGCGTTTATTAAAGAAGTGGAGGCCTTCAACAAGGAGAATTTCCTGGAATTTAAAGCCCCAAAGTTTTACGGACAGCCCTTAAATTGTCTCAAGCTTTGGAGAGCCGTTATCAAGTTAGGTGGCTACGATGTGGTCACCACATCTAAGCTATGGCGGCAAGTTGGAGAATCGTTCCATCCTCCAAAAACATGCACTACAGTCTCCTGGACATTCCGCATTTTCTATGAAAAGGCACTTTTGGAGTATGAGAAGCATTTAAGGCAAAATGGTGAGCTTAACCTTCCTGGTTCAGCTTCTCTTCCGTCTTCAGGCATTGAAAAGGAGGCAAGTAGCCATCAAGCTTCAGGGTCAGGCAGAACAAGAAGAGATGCTGCAGCTCGTGCTATGCAAGGTTGGCATTCTCAGCGCCTTCTTGGATCTGGGGAGGTTACTGAGCCTATTGTTAAGGAGAAAGGCTTGAATTCAACCCCAAAGCAAAAGAACCTCAAAAACATTGGTGTGCAGAAACAAAAAACAACAACCGGCATGGACCTTGTTTTTTCACACGAATCAGAAAAACAGTCAACTGCCGAGGTTATAGATGTTGGACCCCCTGCAGACTGGGTGAAGATCAATGTCAGAGAAACTAAAGACTGCTTTGAGATATTTGCCCTGGTACCTGGACTTCTTCGCGAAGAGGTCCGTGTTCAGTCAGACCCTGCAGGGCGGCTAGTTATAGCAGGCCAACCTGAGCAACTTGACAATCCTTGGGGAATCACACCCTTCAAAAAGGTTGTGAACTTTCCCGCAAGAATCGATCCGCTGCACACGTCAGCGGTTGTGAGCCTGCATGGTCGACTGTTTGTGCGAGTCCCATTTGAGCAGTGA

Protein Analysis

434

Amino Acids

48.04

Weight (kDa)

5.19

Isoelectric Point (pI)

46.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARID PF01388 145 - 229 6.1e-18 ARID/BRIGHT DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 44, 1093
AccB1I GGYRCC 3 cut(s) 44, 421, 1093
AccI GTMKAC 1 cut(s) 1273
AccII CGCG 1 cut(s) 1110
AciI CCGC 8 cut(s) 8, 279, 592, 652, 1144, 1224, 1238, 1253
AclWI GGATC 5 cut(s) 320, 333, 438, 862, 1229
AcsI RAATTY 3 cut(s) 475, 485, 898
AcuI CTGAAG 4 cut(s) 54, 369, 729, 765
AfaI GTAC 2 cut(s) 46, 1095
AfiI CCNNNNNNNGG 2 cut(s) 320, 746
AflIII ACRYGT 1 cut(s) 1245
AgsI TTSAA 7 cut(s) 101, 319, 466, 755, 898, 903, 1204
AhlI ACTAGT 1 cut(s) 269
AjiI CACGTC 1 cut(s) 1248
AjnI CCWGG 6 cut(s) 398, 480, 641, 721, 1089, 1096
AluBI AGCT 6 cut(s) 532, 586, 712, 731, 779, 815
AluI AGCT 6 cut(s) 532, 586, 712, 731, 779, 815
Alw26I GTCTC 3 cut(s) 284, 530, 643
AlwI GGATC 5 cut(s) 320, 333, 438, 862, 1229
AlwNI CAGNNNCTG 1 cut(s) 1136
AoxI GGCC 3 cut(s) 396, 459, 1159
ApeKI GCWGC 3 cut(s) 809, 812, 1240
ApoI RAATTY 3 cut(s) 475, 485, 898
ArsI GACNNNNNNTTYG 2 cut(s) 124, 156
Asp718I GGTACC 2 cut(s) 44, 1093
AspLEI GCGC 1 cut(s) 846
AspS9I GGNCC 3 cut(s) 967, 1025, 1117
AsuHPI GGTGA 4 cut(s) 251, 565, 719, 1054
AvaII GGWCC 3 cut(s) 967, 1025, 1117
BaeGI GKGCMC 1 cut(s) 424
BamHI GGATCC 1 cut(s) 325
BanI GGYRCC 3 cut(s) 44, 421, 1093
BarI GAAGNNNNNNTAC 2 cut(s) 1086, 1118
BauI CACGAG 1 cut(s) 816
BbsI GAAGAC 2 cut(s) 377, 735
BbvCI CCTCAGC 1 cut(s) 393
BbvI GCAGC 3 cut(s) 796, 824, 1227
BccI CCATC 4 cut(s) 221, 269, 621, 780
BceAI ACGGC 2 cut(s) 22, 527
BciT130I CCWGG 6 cut(s) 400, 482, 643, 723, 1091, 1098
BciVI GTATCC 2 cut(s) 4, 121
BclI TGATCA 1 cut(s) 247
BcoDI GTCTC 3 cut(s) 284, 530, 643
BcuI ACTAGT 1 cut(s) 269
BfaI CTAG 3 cut(s) 77, 270, 1148
BfmI CTRYAG 4 cut(s) 633, 810, 1032, 1137
BfoI RGCGCY 1 cut(s) 847
BfuI GTATCC 2 cut(s) 4, 121
BisI GCNGC 5 cut(s) 593, 810, 813, 1145, 1241
BlsI GCNGC 5 cut(s) 594, 811, 814, 1146, 1242
Bme1390I CCNGG 6 cut(s) 400, 482, 643, 723, 1091, 1098
Bme18I GGWCC 3 cut(s) 967, 1025, 1117
BmgBI CACGTC 1 cut(s) 1248
BmgT120I GGNCC 3 cut(s) 967, 1025, 1117
BmiI GGNNCC 6 cut(s) 46, 66, 327, 423, 1027, 1095
BmrFI CCNGG 6 cut(s) 400, 482, 643, 723, 1091, 1098
BmrI ACTGGG 1 cut(s) 1048
BmsI GCATC 3 cut(s) 157, 379, 796
BmuI ACTGGG 1 cut(s) 1048
BoxI GACNNNNGTC 1 cut(s) 109
BpiI GAAGAC 2 cut(s) 377, 735
Bpu10I CCTNAGC 2 cut(s) 393, 1167
BpuEI CTTGAG 1 cut(s) 512
Bsa29I ATCGAT 1 cut(s) 1233
BsaBI GATNNNNATC 1 cut(s) 246
BsaJI CCNNGG 4 cut(s) 399, 1008, 1089, 1184
BsaXI ACNNNNNCTCC 2 cut(s) 223, 253
Bsc4I CCNNNNNNNGG 2 cut(s) 320, 746
Bse118I RCCGGY 1 cut(s) 959
Bse1I ACTGG 1 cut(s) 1043
Bse3DI GCAATG 1 cut(s) 174
Bse8I GATNNNNATC 1 cut(s) 246
BseBI CCWGG 6 cut(s) 400, 482, 643, 723, 1091, 1098
BseCI ATCGAT 1 cut(s) 1233
BseDI CCNNGG 4 cut(s) 399, 1008, 1089, 1184
BseGI GGATG 1 cut(s) 613
BseJI GATNNNNATC 1 cut(s) 246
BseLI CCNNNNNNNGG 2 cut(s) 320, 746
BseMI GCAATG 1 cut(s) 174
BseMII CTCAG 4 cut(s) 384, 854, 861, 1158
BseNI ACTGG 1 cut(s) 1043
BseRI GAGGAG 2 cut(s) 77, 302
BseSI GKGCMC 1 cut(s) 424
BseXI GCAGC 3 cut(s) 796, 824, 1227
BsgI GTGCAG 2 cut(s) 959, 1226
Bsh1236I CGCG 1 cut(s) 1110
BshFI GGCC 3 cut(s) 398, 461, 1161
BshNI GGYRCC 3 cut(s) 44, 421, 1093
BshVI ATCGAT 1 cut(s) 1233
BsiSI CCGG 1 cut(s) 960
BslFI GGGAC 2 cut(s) 97, 1274
BslI CCNNNNNNNGG 2 cut(s) 320, 746
BsmAI GTCTC 3 cut(s) 284, 530, 643
BsmFI GGGAC 2 cut(s) 97, 1274
BsmI GAATGC 1 cut(s) 835
BsnI GGCC 3 cut(s) 398, 461, 1161
Bsp1286I GDGCHC 1 cut(s) 424
Bsp143I GATC 6 cut(s) 247, 325, 430, 854, 1047, 1234
Bsp68I TCGCGA 1 cut(s) 1110
BspACI CCGC 8 cut(s) 8, 279, 592, 652, 1144, 1224, 1238, 1253
BspANI GGCC 3 cut(s) 398, 461, 1161
BspCNI CTCAG 4 cut(s) 385, 853, 862, 1159
BspDI ATCGAT 1 cut(s) 1233
BspFNI CGCG 1 cut(s) 1110
BspLI GGNNCC 6 cut(s) 46, 66, 327, 423, 1027, 1095
BspMAI CTGCAG 3 cut(s) 814, 1036, 1141
BspPI GGATC 5 cut(s) 320, 333, 438, 862, 1229
BspT107I GGYRCC 3 cut(s) 44, 421, 1093
BsrDI GCAATG 1 cut(s) 174
BsrFI RCCGGY 1 cut(s) 959
BsrI ACTGG 1 cut(s) 1043
BssAI RCCGGY 1 cut(s) 959
BssECI CCNNGG 4 cut(s) 399, 1008, 1089, 1184
BssMI GATC 6 cut(s) 247, 325, 430, 854, 1047, 1234
BssSI CACGAG 1 cut(s) 816
BssT1I CCWWGG 1 cut(s) 1184
Bst2BI CACGAG 1 cut(s) 816
Bst2UI CCWGG 6 cut(s) 400, 482, 643, 723, 1091, 1098
Bst4CI ACNGT 4 cut(s) 221, 637, 999, 1278
Bst6I CTCTTC 4 cut(s) 195, 741, 796, 1107
BstAPI GCANNNNNTGC 2 cut(s) 34, 818
BstC8I GCNNGC 2 cut(s) 1159, 1265
BstDEI CTNAG 6 cut(s) 108, 393, 582, 840, 870, 1167
BstEII GGTNACC 1 cut(s) 571
BstF5I GGATG 1 cut(s) 613
BstFNI CGCG 1 cut(s) 1110
BstH2I RGCGCY 1 cut(s) 847
BstHHI GCGC 1 cut(s) 846
BstKTI GATC 6 cut(s) 250, 328, 433, 857, 1050, 1237
BstMAI GTCTC 3 cut(s) 284, 530, 643
BstMBI GATC 6 cut(s) 247, 325, 430, 854, 1047, 1234
BstMWI GCNNNNNNNGC 7 cut(s) 34, 176, 592, 697, 818, 832, 841
BstNI CCWGG 6 cut(s) 400, 482, 643, 723, 1091, 1098
BstNSI RCATGY 1 cut(s) 630
BstPAI GACNNNNGTC 1 cut(s) 109
BstPI GGTNACC 1 cut(s) 571
BstSCI CCNGG 6 cut(s) 398, 480, 641, 721, 1089, 1096
BstSFI CTRYAG 4 cut(s) 633, 810, 1032, 1137
BstSLI GKGCMC 1 cut(s) 424
BstUI CGCG 1 cut(s) 1110
BstV1I GCAGC 3 cut(s) 796, 824, 1227
BstV2I GAAGAC 2 cut(s) 377, 735
BstX2I RGATCY 2 cut(s) 325, 854
BstYI RGATCY 2 cut(s) 325, 854
Bsu15I ATCGAT 1 cut(s) 1233
BsuI GTATCC 2 cut(s) 4, 121
BsuRI GGCC 3 cut(s) 398, 461, 1161
BsuTUI ATCGAT 1 cut(s) 1233
BtrI CACGTC 1 cut(s) 1248
BtsCI GGATG 1 cut(s) 613
BtsIMutI CAGTG 1 cut(s) 226
BtuMI TCGCGA 1 cut(s) 1110
Cac8I GCNNGC 2 cut(s) 1159, 1265
CaiI CAGNNNCTG 1 cut(s) 1136
CfoI GCGC 1 cut(s) 846
Cfr10I RCCGGY 1 cut(s) 959
Cfr13I GGNCC 3 cut(s) 967, 1025, 1117
ClaI ATCGAT 1 cut(s) 1233
Csp6I GTAC 2 cut(s) 45, 1094
CspCI CAANNNNNGTGG 2 cut(s) 538, 573
CviAII CATG 5 cut(s) 341, 375, 627, 964, 1268
CviQI GTAC 2 cut(s) 45, 1094
DdeI CTNAG 6 cut(s) 108, 393, 582, 840, 870, 1167
DpnI GATC 6 cut(s) 249, 327, 432, 856, 1049, 1236
DpnII GATC 6 cut(s) 247, 325, 430, 854, 1047, 1234
DraI TTTAAA 1 cut(s) 490
Eam1104I CTCTTC 4 cut(s) 195, 741, 796, 1107
EarI CTCTTC 4 cut(s) 195, 741, 796, 1107
EciI GGCGGA 1 cut(s) 23
Eco130I CCWWGG 1 cut(s) 1184
Eco147I AGGCCT 1 cut(s) 461
Eco47I GGWCC 3 cut(s) 967, 1025, 1117
Eco57I CTGAAG 4 cut(s) 54, 369, 729, 765
Eco91I GGTNACC 1 cut(s) 571
EcoO65I GGTNACC 1 cut(s) 571
EcoRI GAATTC 1 cut(s) 898
EcoRII CCWGG 6 cut(s) 398, 480, 641, 721, 1089, 1096
EcoT14I CCWWGG 1 cut(s) 1184
ErhI CCWWGG 1 cut(s) 1184
FaeI CATG 5 cut(s) 344, 378, 630, 967, 1271
FaqI GGGAC 2 cut(s) 97, 1274
FatI CATG 5 cut(s) 340, 374, 626, 963, 1267
FauI CCCGC 1 cut(s) 1231
FbaI TGATCA 1 cut(s) 247
FblI GTMKAC 1 cut(s) 1273
Fnu4HI GCNGC 5 cut(s) 593, 810, 813, 1145, 1241
FokI GGATG 1 cut(s) 600
Fsp4HI GCNGC 5 cut(s) 593, 810, 813, 1145, 1241
FspBI CTAG 3 cut(s) 77, 270, 1148
GlaI GCGC 1 cut(s) 845
GluI GCNGC 5 cut(s) 593, 810, 813, 1145, 1241
HaeII RGCGCY 1 cut(s) 847
HaeIII GGCC 3 cut(s) 398, 461, 1161
HapII CCGG 1 cut(s) 960
HhaI GCGC 1 cut(s) 846
Hin1II CATG 5 cut(s) 344, 378, 630, 967, 1271
Hin6I GCGC 1 cut(s) 844
HinP1I GCGC 1 cut(s) 844
HincII GTYRAC 2 cut(s) 1002, 1274
HindII GTYRAC 2 cut(s) 1002, 1274
HindIII AAGCTT 2 cut(s) 530, 777
HinfI GANTC 8 cut(s) 133, 305, 334, 605, 986, 1191, 1230, 1287
HpaII CCGG 1 cut(s) 960
HphI GGTGA 4 cut(s) 251, 565, 719, 1054
Hpy166II GTNNAC 3 cut(s) 1002, 1216, 1274
Hpy188I TCNGA 7 cut(s) 73, 166, 216, 256, 991, 1058, 1132
Hpy188III TCNNGA 5 cut(s) 122, 284, 347, 434, 1109
Hpy8I GTNNAC 3 cut(s) 1002, 1216, 1274
Hpy99I CGWCG 1 cut(s) 334
HpyAV CCTTC 6 cut(s) 78, 313, 472, 728, 857, 1210
HpyCH4III ACNGT 4 cut(s) 221, 637, 999, 1278
HpyCH4IV ACGT 1 cut(s) 1247
HpyCH4V TGCA 9 cut(s) 22, 630, 812, 826, 940, 1034, 1139, 1243, 1267
HpyF10VI GCNNNNNNNGC 7 cut(s) 34, 176, 592, 697, 818, 832, 841
HpyF3I CTNAG 6 cut(s) 108, 393, 582, 840, 870, 1167
HpySE526I ACGT 1 cut(s) 1247
Hsp92II CATG 5 cut(s) 344, 378, 630, 967, 1271
HspAI GCGC 1 cut(s) 844
KpnI GGTACC 2 cut(s) 48, 1097
Ksp22I TGATCA 1 cut(s) 247
Kzo9I GATC 6 cut(s) 247, 325, 430, 854, 1047, 1234
LmnI GCTCC 2 cut(s) 64, 175
Lsp1109I GCAGC 3 cut(s) 796, 824, 1227
LweI GCATC 3 cut(s) 157, 379, 796
MaeI CTAG 3 cut(s) 77, 270, 1148
MaeII ACGT 1 cut(s) 1247
MaeIII GTNAC 2 cut(s) 571, 865
MalI GATC 6 cut(s) 249, 327, 432, 856, 1049, 1236
MboI GATC 6 cut(s) 247, 325, 430, 854, 1047, 1234
MflI RGATCY 2 cut(s) 325, 854
MhlI GDGCHC 1 cut(s) 424
MluCI AATT 5 cut(s) 186, 475, 485, 520, 898
MlyI GAGTC 3 cut(s) 127, 343, 1296
MmeI TCCRAC 2 cut(s) 580, 1003
MseI TTAA 7 cut(s) 360, 447, 489, 518, 695, 714, 882
MslI CAYNNNNRTG 1 cut(s) 935
MspA1I CMGCKG 2 cut(s) 1240, 1253
MspI CCGG 1 cut(s) 960
MspR9I CCNGG 6 cut(s) 400, 482, 643, 723, 1091, 1098
Mva1269I GAATGC 1 cut(s) 835
MvaI CCWGG 6 cut(s) 400, 482, 643, 723, 1091, 1098
MvnI CGCG 1 cut(s) 1110
MwoI GCNNNNNNNGC 7 cut(s) 34, 176, 592, 697, 818, 832, 841
NdeII GATC 6 cut(s) 247, 325, 430, 854, 1047, 1234
NlaIII CATG 5 cut(s) 344, 378, 630, 967, 1271
NlaIV GGNNCC 6 cut(s) 46, 66, 327, 423, 1027, 1095
NmeAIII GCCGAG 1 cut(s) 1033
NmuCI GTSAC 1 cut(s) 571
NruI TCGCGA 1 cut(s) 1110
NspI RCATGY 1 cut(s) 630
PceI AGGCCT 1 cut(s) 461
PctI GAATGC 1 cut(s) 835
PfeI GAWTC 5 cut(s) 305, 605, 986, 1191, 1230
PfoI TCCNGGA 2 cut(s) 480, 641
PkrI GCNGC 5 cut(s) 594, 811, 814, 1146, 1242
PleI GAGTC 3 cut(s) 127, 342, 1295
PpsI GAGTC 3 cut(s) 127, 342, 1295
PshAI GACNNNNGTC 1 cut(s) 109
Psp6I CCWGG 6 cut(s) 398, 480, 641, 721, 1089, 1096
PspEI GGTNACC 1 cut(s) 571
PspGI CCWGG 6 cut(s) 398, 480, 641, 721, 1089, 1096
PspN4I GGNNCC 6 cut(s) 46, 66, 327, 423, 1027, 1095
PspPI GGNCC 3 cut(s) 967, 1025, 1117
PstI CTGCAG 3 cut(s) 814, 1036, 1141
PstNI CAGNNNCTG 1 cut(s) 1136
PsuI RGATCY 2 cut(s) 325, 854
RruI TCGCGA 1 cut(s) 1110
RsaI GTAC 2 cut(s) 46, 1095
RsaNI GTAC 2 cut(s) 45, 1094
RseI CAYNNNNRTG 1 cut(s) 935
SalI GTCGAC 1 cut(s) 1272
SaqAI TTAA 7 cut(s) 360, 447, 489, 518, 695, 714, 882
SatI GCNGC 5 cut(s) 593, 810, 813, 1145, 1241
Sau3AI GATC 6 cut(s) 247, 325, 430, 854, 1047, 1234
Sau96I GGNCC 3 cut(s) 967, 1025, 1117
SbfI CCTGCAGG 1 cut(s) 1141
SchI GAGTC 3 cut(s) 127, 343, 1296
ScrFI CCNGG 6 cut(s) 400, 482, 643, 723, 1091, 1098
SdaI CCTGCAGG 1 cut(s) 1141
SduI GDGCHC 1 cut(s) 424
SfaNI GCATC 3 cut(s) 157, 379, 796
SfcI CTRYAG 4 cut(s) 633, 810, 1032, 1137
SinI GGWCC 3 cut(s) 967, 1025, 1117
SmiMI CAYNNNNRTG 1 cut(s) 935
SmlI CTYRAG 1 cut(s) 527
SmoI CTYRAG 1 cut(s) 527
SpeI ACTAGT 1 cut(s) 269
Sse8387I CCTGCAGG 1 cut(s) 1141
Sse9I AATT 5 cut(s) 186, 475, 485, 520, 898
SseBI AGGCCT 1 cut(s) 461
SsiI CCGC 8 cut(s) 8, 279, 592, 652, 1144, 1224, 1238, 1253
SspMI CTAG 3 cut(s) 77, 270, 1148
StuI AGGCCT 1 cut(s) 461
StyD4I CCNGG 6 cut(s) 398, 480, 641, 721, 1089, 1096
StyI CCWWGG 1 cut(s) 1184
TaaI ACNGT 4 cut(s) 221, 637, 999, 1278
TaiI ACGT 1 cut(s) 1250
TaqI TCGA 3 cut(s) 332, 1233, 1273
TasI AATT 5 cut(s) 186, 475, 485, 520, 898
TauI GCSGC 2 cut(s) 595, 1147
TfiI GAWTC 5 cut(s) 305, 605, 986, 1191, 1230
Tru1I TTAA 7 cut(s) 360, 447, 489, 518, 695, 714, 882
Tru9I TTAA 7 cut(s) 360, 447, 489, 518, 695, 714, 882
TscAI CASTG 1 cut(s) 226
TseFI GTSAC 1 cut(s) 571
TseI GCWGC 3 cut(s) 809, 812, 1240
Tsp45I GTSAC 1 cut(s) 571
TspDTI ATGAA 4 cut(s) 146, 213, 426, 678
TspGWI ACGGA 4 cut(s) 318, 522, 729, 1109
TspRI CASTG 1 cut(s) 226
VpaK11BI GGWCC 3 cut(s) 967, 1025, 1117
XapI RAATTY 3 cut(s) 475, 485, 898
XceI RCATGY 1 cut(s) 630
XmiI GTMKAC 1 cut(s) 1273
XspI CTAG 3 cut(s) 77, 270, 1148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.