Rroxscaffold_7G00187010

BRIGHT, ARID (A/T-rich interaction domain) domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0001717
Physical Location & Seq
Forward (+)
26356556 .. 26362186
5631 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00187010.1

Sequence Viewer

Length: 2127 bp
ATGGAGGAAATAGGAAAAGAAGAGGGGAAAAATATGGAGGAGGGTCTAGAAAACGAAACCCATGACCATGCACAACTTGAAGGGGGTCAAGAACCACCGAAACCCAACTCGGTCGATAGTGTAATAGTGGAGATGCAGAAGCTTATTGGTGTCAGTGGTGTTGAAATGCCTGCTGACGTCGAGGGTCCGGTTGATTTGGCTCCCACTGTCCTCAAAACTGCTGAAGATGCTGAAATTGTTACTGACACTAACAAAGAGCTGCAGGGCGATACTGGAAGTGATAAGCTTGTCAGTAATGTGGATTCTGATGTGCATCGTGAGAGTGAGGTGTCTTTGAAGGTTGAAAGTGATAAGCTTGTCAGTAATGTGGACTCTGATGTGCATCATGAGAGTGAGGTCTCTGTGAAGGTTGAAAGTGATAATCTTGTTGGTAATGTGGATTCTGATTTGCAACGTGAGGGTGAGGTCTGTCTGGAGAATGTAAGTGAAGAGAATGGTGAGAAAGGGGAAGAGCTGGAGGATGTTAAGGTCAGTGAAGCCATCGAATTAGTTGCCGGTGCTGAGACTGATAATCTTGTTGGTAATGGGGATGGGGATTCGCACCACAAAGCTCAGCCTACCGTGGACATTGAAAAGGAAGATAATGATGGTGAGGAAGGGAAAGCACTGAAGGATGAGGGGGGCATCAAGGCCAACCCCTCCAATGAACCGCATATGAATGCTGAAACTAATATTGTTGTCAGTCAGGTGGAGCCTGATAGGTGTGGTGATGGTGATGGTGATGTTGCAAAGGCAAAACTAACGGATGGGGTGAGCAGCAAGGCTAACCCCTCCAGTGAACTGCTTGCAAGTGCTGAAACTGATAAGGTTGTTTGTAAGTTGGAACATGATATGCCTCGTGATACTAAGGTTGCAAGGGAGAAACTGGTGGATGCGGTGAGCAGTAAGGCCAAGCGCTCTCCCAATGAACCACCTAGCAGTGTTAAAGCCAATAATGTTTTTAAGGTAGAGCGTGGTATGCCTCAAGATAATGAGGTATCAATGGAGACTGAGTCTGAGTCTGATGACGACGATGAGAAAGGACATGCAGTAACTGGTGGGTTGAGCAGCAAAACAAAGTTCTCTCTACATCATGGCATAAAGGAGCAACATTCAAAATCCAAGTTTCATGTAGGACGAGAGGTTGGGATGAAGAGTTTGGATCCAGAGCGAACCTTTCTCTTGGCTCCAGGTGCAGAGGGTGATGAGTCGGGGACTGAAGAGGAGCAAGCTGAATTCATGAAGGAGGTGGAGAATTTTTATAAAGAGAAGCACTTGGAATTCAAAGCGCCAAAGTTTTACAAAGAGGAATTGAATCTGCTCAAGTTATGGAGAGCTGTGATCAAACTTGGCGGCTATGAAAAGGTTACTTCATGCAAGTTGTGGCGGCAGGTTGGAGAATCATTTAATCCCCCAAAGACTTGTACTACTGTCTCTTGGACTTTTCGGATTTTCTACGAGAAGGCATTACTTGAGTTTGAAAAGCATAGATGGCATGGCAGTGAGCTTGCTCTTCCTGAACCTTCTAGAGTTGAGATTCGGGCTGATGGTAGTCAAACTTGTGGATCAGGCAGGACACTAAGGGATGCTGCAGCTCGTGCCATGCAGGGTTGGCACTCTCAGCGCCTTTTTGGAAATGGCGAGGAGAAGCACTTGAGTACCATGCCAAAAAGCGACAAGCAGCTCAAGAGCTCTGGTTTGTTAAAGCGGAAAAAGCTATCTCCTGGGGATTGTGCTGCTCAGATTACCGACATGAAAGCGACAAAGCCACGGTTAGATATGACGGTATTCGATATTGGACCGCCAGCAGATTGGGTGAAAATTAACGTGAAACGATTTAGCGACTGCTTTGAGGTATATGCCCTAGTTCCTGGACTTCTGCGTGAGGAGGTGCATGTTCAATCTGATCCAATTGGACGCTTGATTATTTCTGGTCAACCAATGCAACTGGACAATCCTTGGGGTGTCACACCCTTTAAGAAGGTTGTCAGCTTACCTTCGAGAATTGATCCACATCAGACATCTGCTGTAGTGACCTTGAATGGCCAGTTGTTTGTGCGGGTTCCGTTTGAACAGTCAGATTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ARID HSP20

Protein Analysis

708

Amino Acids

77.92

Weight (kDa)

4.89

Isoelectric Point (pI)

37.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARID PF01388 423 - 507 3.6e-19 ARID/BRIGHT DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1302
AatII GACGTC 1 cut(s) 180
Acc36I ACCTGC 1 cut(s) 1420
AciI CCGC 7 cut(s) 710, 935, 1392, 1426, 1747, 1841, 2098
AclWI GGATC 5 cut(s) 1196, 1209, 1612, 1940, 2042
AcoI YGGCCR 1 cut(s) 2083
AcsI RAATTY 3 cut(s) 1274, 1294, 1319
AcuI CTGAAG 3 cut(s) 243, 689, 1278
AcyI GRCGYC 1 cut(s) 177
AfaI GTAC 2 cut(s) 1465, 1699
AfeI AGCGCT 1 cut(s) 956
AjnI CCWGG 3 cut(s) 1228, 1762, 1909
Alw21I GWGCWC 1 cut(s) 1733
Alw26I GTCTC 4 cut(s) 403, 557, 1040, 1477
AlwI GGATC 5 cut(s) 1196, 1209, 1612, 1940, 2042
AlwNI CAGNNNCTG 1 cut(s) 1094
Aor51HI AGCGCT 1 cut(s) 956
AoxI GGCC 3 cut(s) 690, 948, 2083
ApeKI GCWGC 7 cut(s) 259, 816, 1107, 1628, 1631, 1720, 1775
ApoI RAATTY 3 cut(s) 1274, 1294, 1319
AspLEI GCGC 3 cut(s) 957, 1330, 1665
AspS9I GGNCC 2 cut(s) 185, 1838
AvaII GGWCC 2 cut(s) 185, 1838
BaeI ACNNNNGTAYC 4 cut(s) 894, 927, 1681, 1714
BalI TGGCCA 1 cut(s) 2085
BamHI GGATCC 1 cut(s) 1201
BanII GRGCYC 1 cut(s) 1733
BauI CACGAG 2 cut(s) 897, 1635
Bbv12I GWGCWC 1 cut(s) 1733
BbvI GCAGC 7 cut(s) 246, 828, 1119, 1615, 1643, 1732, 1762
BccI CCATC 8 cut(s) 548, 584, 641, 764, 770, 800, 1524, 1580
BcgI CGANNNNNNTGC 2 cut(s) 533, 567
BciT130I CCWGG 3 cut(s) 1230, 1764, 1911
BclI TGATCA 1 cut(s) 1380
BcoDI GTCTC 4 cut(s) 403, 557, 1040, 1477
BfaI CTAG 4 cut(s) 47, 975, 1566, 1904
BfmI CTRYAG 3 cut(s) 260, 1629, 2067
BfoI RGCGCY 3 cut(s) 958, 1331, 1666
BfuAI ACCTGC 1 cut(s) 1420
BisI GCNGC 9 cut(s) 260, 817, 1108, 1393, 1427, 1629, 1632, 1721, 1776
BlpI GCTNAGC 1 cut(s) 612
BlsI GCNGC 9 cut(s) 261, 818, 1109, 1394, 1428, 1630, 1633, 1722, 1777
Bme1390I CCNGG 3 cut(s) 1230, 1764, 1911
Bme18I GGWCC 2 cut(s) 185, 1838
BmgT120I GGNCC 2 cut(s) 185, 1838
BmiI GGNNCC 6 cut(s) 186, 201, 753, 1203, 1227, 2103
BmrFI CCNGG 3 cut(s) 1230, 1764, 1911
BmsI GCATC 7 cut(s) 123, 217, 322, 391, 693, 922, 1615
BpmI CTGGAG 4 cut(s) 494, 536, 817, 1212
Bpu1102I GCTNAGC 1 cut(s) 612
BpuEI CTTGAG 5 cut(s) 1008, 1346, 1532, 1709, 1714
BsaBI GATNNNNATC 3 cut(s) 312, 381, 2052
BsaHI GRCGYC 1 cut(s) 177
BsaI GGTCTC 1 cut(s) 403
BsaJI CCNNGG 4 cut(s) 621, 1763, 1808, 1997
BsaWI WCCGGW 1 cut(s) 187
BsaXI ACNNNNNCTCC 2 cut(s) 1037, 1067
Bse118I RCCGGY 1 cut(s) 554
Bse1I ACTGG 6 cut(s) 277, 834, 930, 1099, 1992, 2086
Bse8I GATNNNNATC 3 cut(s) 312, 381, 2052
BseBI CCWGG 3 cut(s) 1230, 1764, 1911
BseDI CCNNGG 4 cut(s) 621, 1763, 1808, 1997
BseGI GGATG 7 cut(s) 526, 595, 679, 811, 937, 1194, 1630
BseJI GATNNNNATC 3 cut(s) 312, 381, 2052
BseMII CTCAG 6 cut(s) 552, 626, 1041, 1047, 1673, 1793
BseNI ACTGG 6 cut(s) 277, 834, 930, 1099, 1992, 2086
BseRI GAGGAG 4 cut(s) 53, 1277, 1697, 1940
BseXI GCAGC 7 cut(s) 246, 828, 1119, 1615, 1643, 1732, 1762
BsgI GTGCAG 1 cut(s) 1254
Bsh1285I CGRYCG 1 cut(s) 114
BshFI GGCC 3 cut(s) 692, 950, 2085
BsiEI CGRYCG 1 cut(s) 114
BsiHKAI GWGCWC 1 cut(s) 1733
BsiSI CCGG 2 cut(s) 188, 555
BslFI GGGAC 1 cut(s) 1267
BsmAI GTCTC 4 cut(s) 403, 557, 1040, 1477
BsmFI GGGAC 1 cut(s) 1267
BsmI GAATGC 1 cut(s) 724
BsnI GGCC 3 cut(s) 692, 950, 2085
Bso31I GGTCTC 1 cut(s) 403
Bsp1286I GDGCHC 1 cut(s) 1733
Bsp143I GATC 5 cut(s) 1201, 1380, 1604, 1945, 2047
Bsp1720I GCTNAGC 1 cut(s) 612
BspACI CCGC 7 cut(s) 710, 935, 1392, 1426, 1747, 1841, 2098
BspANI GGCC 3 cut(s) 692, 950, 2085
BspCNI CTCAG 6 cut(s) 553, 625, 1042, 1048, 1672, 1792
BspHI TCATGA 2 cut(s) 385, 1278
BspLI GGNNCC 6 cut(s) 186, 201, 753, 1203, 1227, 2103
BspMAI CTGCAG 2 cut(s) 264, 1633
BspMI ACCTGC 1 cut(s) 1420
BspPI GGATC 5 cut(s) 1196, 1209, 1612, 1940, 2042
BspQI GCTCTTC 2 cut(s) 504, 1557
BspTNI GGTCTC 1 cut(s) 403
BsrFI RCCGGY 1 cut(s) 554
BsrI ACTGG 6 cut(s) 277, 834, 930, 1099, 1992, 2086
BssAI RCCGGY 1 cut(s) 554
BssECI CCNNGG 4 cut(s) 621, 1763, 1808, 1997
BssMI GATC 5 cut(s) 1201, 1380, 1604, 1945, 2047
BssNI GRCGYC 1 cut(s) 177
BssSI CACGAG 2 cut(s) 897, 1635
BssT1I CCWWGG 1 cut(s) 1997
Bst2BI CACGAG 2 cut(s) 897, 1635
Bst2UI CCWGG 3 cut(s) 1230, 1764, 1911
Bst4CI ACNGT 6 cut(s) 208, 622, 1471, 1812, 1825, 2115
Bst6I CTCTTC 6 cut(s) 15, 483, 504, 1187, 1254, 1557
BstACI GRCGYC 1 cut(s) 177
BstAPI GCANNNNNTGC 1 cut(s) 1637
BstC8I GCNNGC 5 cut(s) 171, 846, 1269, 1548, 1845
BstDEI CTNAG 8 cut(s) 561, 612, 906, 1050, 1056, 1619, 1659, 1779
BstDSI CCRYGG 2 cut(s) 621, 1808
BstF5I GGATG 7 cut(s) 526, 595, 679, 811, 937, 1194, 1630
BstH2I RGCGCY 3 cut(s) 958, 1331, 1666
BstHHI GCGC 3 cut(s) 957, 1330, 1665
BstKTI GATC 5 cut(s) 1204, 1383, 1607, 1948, 2050
BstMAI GTCTC 4 cut(s) 403, 557, 1040, 1477
BstMBI GATC 5 cut(s) 1201, 1380, 1604, 1945, 2047
BstMCI CGRYCG 1 cut(s) 114
BstMWI GCNNNNNNNGC 8 cut(s) 227, 1018, 1232, 1531, 1637, 1651, 1660, 1753
BstNI CCWGG 3 cut(s) 1230, 1764, 1911
BstNSI RCATGY 2 cut(s) 1088, 1937
BstSCI CCNGG 3 cut(s) 1228, 1762, 1909
BstSFI CTRYAG 3 cut(s) 260, 1629, 2067
BstV1I GCAGC 7 cut(s) 246, 828, 1119, 1615, 1643, 1732, 1762
BstX2I RGATCY 1 cut(s) 1201
BstXI CCANNNNNNTGG 1 cut(s) 1851
BstYI RGATCY 1 cut(s) 1201
BsuRI GGCC 3 cut(s) 692, 950, 2085
BtgI CCRYGG 2 cut(s) 621, 1808
BtsCI GGATG 7 cut(s) 526, 595, 679, 811, 937, 1194, 1630
BtsI GCAGTG 2 cut(s) 985, 1546
BtsIMutI CAGTG 7 cut(s) 160, 204, 538, 665, 841, 985, 1546
BveI ACCTGC 1 cut(s) 1420
Cac8I GCNNGC 5 cut(s) 171, 846, 1269, 1548, 1845
CaiI CAGNNNCTG 1 cut(s) 1094
CciI TCATGA 2 cut(s) 385, 1278
CfoI GCGC 3 cut(s) 957, 1330, 1665
Cfr10I RCCGGY 1 cut(s) 554
Cfr13I GGNCC 2 cut(s) 185, 1838
CseI GACGC 1 cut(s) 1965
Csp6I GTAC 2 cut(s) 1464, 1698
CviQI GTAC 2 cut(s) 1464, 1698
DdeI CTNAG 8 cut(s) 561, 612, 906, 1050, 1056, 1619, 1659, 1779
DpnI GATC 5 cut(s) 1203, 1382, 1606, 1947, 2049
DpnII GATC 5 cut(s) 1201, 1380, 1604, 1945, 2047
EaeI YGGCCR 1 cut(s) 2083
Eam1104I CTCTTC 6 cut(s) 15, 483, 504, 1187, 1254, 1557
EarI CTCTTC 6 cut(s) 15, 483, 504, 1187, 1254, 1557
Ecl136II GAGCTC 1 cut(s) 1731
Eco130I CCWWGG 1 cut(s) 1997
Eco24I GRGCYC 1 cut(s) 1733
Eco31I GGTCTC 1 cut(s) 403
Eco47I GGWCC 2 cut(s) 185, 1838
Eco47III AGCGCT 1 cut(s) 956
Eco53kI GAGCTC 1 cut(s) 1731
Eco57I CTGAAG 3 cut(s) 243, 689, 1278
EcoICRI GAGCTC 1 cut(s) 1731
EcoRI GAATTC 2 cut(s) 1274, 1319
EcoRII CCWGG 3 cut(s) 1228, 1762, 1909
EcoT14I CCWWGG 1 cut(s) 1997
EcoT38I GRGCYC 1 cut(s) 1733
ErhI CCWWGG 1 cut(s) 1997
FaqI GGGAC 1 cut(s) 1267
FauI CCCGC 1 cut(s) 2091
FauNDI CATATG 1 cut(s) 714
FbaI TGATCA 1 cut(s) 1380
Fnu4HI GCNGC 9 cut(s) 260, 817, 1108, 1393, 1427, 1629, 1632, 1721, 1776
FokI GGATG 7 cut(s) 533, 602, 686, 818, 944, 1201, 1637
FriOI GRGCYC 1 cut(s) 1733
Fsp4HI GCNGC 9 cut(s) 260, 817, 1108, 1393, 1427, 1629, 1632, 1721, 1776
FspBI CTAG 4 cut(s) 47, 975, 1566, 1904
GlaI GCGC 3 cut(s) 956, 1329, 1664
GluI GCNGC 9 cut(s) 260, 817, 1108, 1393, 1427, 1629, 1632, 1721, 1776
GsuI CTGGAG 4 cut(s) 494, 536, 817, 1212
HaeII RGCGCY 3 cut(s) 958, 1331, 1666
HaeIII GGCC 3 cut(s) 692, 950, 2085
HapII CCGG 2 cut(s) 188, 555
HgaI GACGC 1 cut(s) 1965
HhaI GCGC 3 cut(s) 957, 1330, 1665
Hin1I GRCGYC 1 cut(s) 177
Hin6I GCGC 3 cut(s) 955, 1328, 1663
HinP1I GCGC 3 cut(s) 955, 1328, 1663
HincII GTYRAC 1 cut(s) 1976
HindII GTYRAC 1 cut(s) 1976
HindIII AAGCTT 3 cut(s) 140, 284, 353
HpaII CCGG 2 cut(s) 188, 555
Hpy166II GTNNAC 4 cut(s) 370, 625, 839, 1976
Hpy8I GTNNAC 4 cut(s) 370, 625, 839, 1976
Hpy99I CGWCG 2 cut(s) 182, 1073
HpyCH4III ACNGT 6 cut(s) 208, 622, 1471, 1812, 1825, 2115
HpyCH4IV ACGT 3 cut(s) 177, 454, 1866
HpyF10VI GCNNNNNNNGC 8 cut(s) 227, 1018, 1232, 1531, 1637, 1651, 1660, 1753
HpyF3I CTNAG 8 cut(s) 561, 612, 906, 1050, 1056, 1619, 1659, 1779
HpySE526I ACGT 3 cut(s) 177, 454, 1866
Hsp92I GRCGYC 1 cut(s) 177
HspAI GCGC 3 cut(s) 955, 1328, 1663
Ksp22I TGATCA 1 cut(s) 1380
Kzo9I GATC 5 cut(s) 1201, 1380, 1604, 1945, 2047
LguI GCTCTTC 2 cut(s) 504, 1557
LmnI GCTCC 5 cut(s) 205, 751, 1144, 1231, 1264
Lsp1109I GCAGC 7 cut(s) 246, 828, 1119, 1615, 1643, 1732, 1762
LweI GCATC 7 cut(s) 123, 217, 322, 391, 693, 922, 1615
MaeI CTAG 4 cut(s) 47, 975, 1566, 1904
MaeII ACGT 3 cut(s) 177, 454, 1866
MaeIII GTNAC 5 cut(s) 238, 1090, 1405, 2005, 2071
MalI GATC 5 cut(s) 1203, 1382, 1606, 1947, 2049
MboI GATC 5 cut(s) 1201, 1380, 1604, 1945, 2047
MboII GAAGA 8 cut(s) 32, 236, 500, 521, 650, 1204, 1271, 1544
MfeI CAATTG 1 cut(s) 1950
MflI RGATCY 1 cut(s) 1201
MhlI GDGCHC 1 cut(s) 1733
MlsI TGGCCA 1 cut(s) 2085
MluCI AATT 9 cut(s) 234, 545, 1274, 1294, 1319, 1349, 1860, 1950, 2043
MluNI TGGCCA 1 cut(s) 2085
MlyI GAGTC 4 cut(s) 365, 1061, 1067, 1256
MmeI TCCRAC 2 cut(s) 861, 1414
Mox20I TGGCCA 1 cut(s) 2085
MscI TGGCCA 1 cut(s) 2085
MseI TTAA 8 cut(s) 525, 984, 1002, 1446, 1742, 1863, 2016, 2125
MslI CAYNNNNRTG 4 cut(s) 66, 390, 717, 1539
Msp20I TGGCCA 1 cut(s) 2085
MspI CCGG 2 cut(s) 188, 555
MspR9I CCNGG 3 cut(s) 1230, 1764, 1911
MunI CAATTG 1 cut(s) 1950
Mva1269I GAATGC 1 cut(s) 724
MvaI CCWGG 3 cut(s) 1230, 1764, 1911
MwoI GCNNNNNNNGC 8 cut(s) 227, 1018, 1232, 1531, 1637, 1651, 1660, 1753
NdeI CATATG 1 cut(s) 714
NdeII GATC 5 cut(s) 1201, 1380, 1604, 1945, 2047
NlaIV GGNNCC 6 cut(s) 186, 201, 753, 1203, 1227, 2103
NmuCI GTSAC 2 cut(s) 2005, 2071
NspI RCATGY 2 cut(s) 1088, 1937
PagI TCATGA 2 cut(s) 385, 1278
PciSI GCTCTTC 2 cut(s) 504, 1557
PctI GAATGC 1 cut(s) 724
PfeI GAWTC 6 cut(s) 302, 440, 596, 1354, 1439, 1576
PflFI GACNNNGTC 1 cut(s) 1051
PfoI TCCNGGA 1 cut(s) 1909
PkrI GCNGC 9 cut(s) 261, 818, 1109, 1394, 1428, 1630, 1633, 1722, 1777
PleI GAGTC 4 cut(s) 365, 1060, 1066, 1255
PpsI GAGTC 4 cut(s) 365, 1060, 1066, 1255
PsiI TTATAA 1 cut(s) 1302
Psp124BI GAGCTC 1 cut(s) 1733
Psp6I CCWGG 3 cut(s) 1228, 1762, 1909
PspGI CCWGG 3 cut(s) 1228, 1762, 1909
PspN4I GGNNCC 6 cut(s) 186, 201, 753, 1203, 1227, 2103
PspPI GGNCC 2 cut(s) 185, 1838
PstI CTGCAG 2 cut(s) 264, 1633
PstNI CAGNNNCTG 1 cut(s) 1094
PsuI RGATCY 1 cut(s) 1201
PsyI GACNNNGTC 1 cut(s) 1051
RsaI GTAC 2 cut(s) 1465, 1699
RsaNI GTAC 2 cut(s) 1464, 1698
RseI CAYNNNNRTG 4 cut(s) 66, 390, 717, 1539
SacI GAGCTC 1 cut(s) 1733
SapI GCTCTTC 2 cut(s) 504, 1557
SaqAI TTAA 8 cut(s) 525, 984, 1002, 1446, 1742, 1863, 2016, 2125
SatI GCNGC 9 cut(s) 260, 817, 1108, 1393, 1427, 1629, 1632, 1721, 1776
Sau3AI GATC 5 cut(s) 1201, 1380, 1604, 1945, 2047
Sau96I GGNCC 2 cut(s) 185, 1838
SchI GAGTC 4 cut(s) 365, 1061, 1067, 1256
ScrFI CCNGG 3 cut(s) 1230, 1764, 1911
SduI GDGCHC 1 cut(s) 1733
SfaNI GCATC 7 cut(s) 123, 217, 322, 391, 693, 922, 1615
SfcI CTRYAG 3 cut(s) 260, 1629, 2067
SinI GGWCC 2 cut(s) 185, 1838
SmiMI CAYNNNNRTG 4 cut(s) 66, 390, 717, 1539
SmlI CTYRAG 5 cut(s) 1023, 1361, 1511, 1693, 1724
SmoI CTYRAG 5 cut(s) 1023, 1361, 1511, 1693, 1724
Sse9I AATT 9 cut(s) 234, 545, 1274, 1294, 1319, 1349, 1860, 1950, 2043
SsiI CCGC 7 cut(s) 710, 935, 1392, 1426, 1747, 1841, 2098
SspI AATATT 1 cut(s) 733
SspMI CTAG 4 cut(s) 47, 975, 1566, 1904
SstI GAGCTC 1 cut(s) 1733
StyD4I CCNGG 3 cut(s) 1228, 1762, 1909
StyI CCWWGG 1 cut(s) 1997
TaaI ACNGT 6 cut(s) 208, 622, 1471, 1812, 1825, 2115
TaiI ACGT 3 cut(s) 180, 457, 1869
TaqI TCGA 5 cut(s) 114, 180, 543, 1830, 2039
TaqII GACCGA 1 cut(s) 100
TasI AATT 9 cut(s) 234, 545, 1274, 1294, 1319, 1349, 1860, 1950, 2043
TatI WGTACW 1 cut(s) 1463
TauI GCSGC 2 cut(s) 1395, 1429
TfiI GAWTC 6 cut(s) 302, 440, 596, 1354, 1439, 1576
Tru1I TTAA 8 cut(s) 525, 984, 1002, 1446, 1742, 1863, 2016, 2125
Tru9I TTAA 8 cut(s) 525, 984, 1002, 1446, 1742, 1863, 2016, 2125
TscAI CASTG 7 cut(s) 160, 211, 538, 672, 841, 985, 1546
TseFI GTSAC 2 cut(s) 2005, 2071
TseI GCWGC 7 cut(s) 259, 816, 1107, 1628, 1631, 1720, 1775
Tsp45I GTSAC 2 cut(s) 2005, 2071
TspGWI ACGGA 2 cut(s) 818, 2094
TspRI CASTG 7 cut(s) 160, 211, 538, 672, 841, 985, 1546
Tth111I GACNNNGTC 1 cut(s) 1051
VpaK11BI GGWCC 2 cut(s) 185, 1838
XapI RAATTY 3 cut(s) 1274, 1294, 1319
XbaI TCTAGA 2 cut(s) 46, 1565
XceI RCATGY 2 cut(s) 1088, 1937
XspI CTAG 4 cut(s) 47, 975, 1566, 1904
ZraI GACGTC 1 cut(s) 178
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.