BRIGHT, ARID (A/T-rich interaction domain) domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G20910 AT1G20910 AT1G76510 AT1G76510 AT1G76510 AT1G76510 |
| fragaria_vesca | FvH4_2g17130 FvH4_5g29710 FvH4_5g29710 FvH4_5g29710 FvH4_5g29710 FvH4_5g29710 |
| malus_domestica | MD05G1144500.v1.1 MD06G1002900.v1.1 MD10G1143800.v1.1 |
| prunus_persica | Prupe.5G004500_v2.0.a1 Prupe.5G004500_v2.0.a1 Prupe.5G004500_v2.0.a1 Prupe.8G182600_v2.0.a1 Prupe.8G182600_v2.0.a1 |
| pyrus_communis | pycom05g13950 pycom06g00300 pycom10g12380 pycom16g26250 |
| rosa_chinensis | RchiOBHm_Chr6g0281551 RchiOBHm_Chr7g0216981 |
| rosa_laevigata | RLG00000002516 RLG00000012964 |
| rosa_multiflora | Rmu_sc0000854.1_g000027 Rmu_sc0012649.1_g000002 Rmu_sc0021437.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00242670 Rroxscaffold_7G00187010 |
| rosa_rugosa | Rorug06G0141500 Rorug06G0141600 Rorug06G0141600 Rorug07G0164700 Rorug07G0164700 |
| rosa_samantha | Rh6AG254000 Rh6BG256900 Rh6CG256100 Rh6DG248100 Rh7AG304900 Rh7BG296400 Rh7CG324000 Rh7DG305000 |
| rosa_wichuraiana | Rw6G022050 Rw7G025890 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 413 |
| AccB1I | GGYRCC | 1 cut(s) | 2589 |
| AciI | CCGC | 5 cut(s) | 272, 815, 1880, 2148, 2380 |
| AclI | AACGTT | 1 cut(s) | 1392 |
| AclWI | GGATC | 4 cut(s) | 487, 2224, 2573, 2675 |
| AcoI | YGGCCR | 1 cut(s) | 2716 |
| AcsI | RAATTY | 4 cut(s) | 1928, 1963, 2098, 2123 |
| AcuI | CTGAAG | 4 cut(s) | 66, 255, 566, 849 |
| AcyI | GRCGYC | 3 cut(s) | 2035, 2473, 2590 |
| AfaI | GTAC | 3 cut(s) | 1738, 2074, 2332 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1703 |
| AflIII | ACRYGT | 1 cut(s) | 1755 |
| AjnI | CCWGG | 4 cut(s) | 1290, 1834, 2412, 2542 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1804, 1836 |
| Alw21I | GWGCWC | 3 cut(s) | 327, 428, 1755 |
| Alw26I | GTCTC | 5 cut(s) | 134, 443, 1043, 1652, 2086 |
| Alw44I | GTGCAC | 1 cut(s) | 323 |
| AlwI | GGATC | 4 cut(s) | 487, 2224, 2573, 2675 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 452, 1841, 1865 |
| Ama87I | CYCGRG | 1 cut(s) | 421 |
| AoxI | GGCC | 9 cut(s) | 567, 693, 921, 1179, 1305, 1431, 1560, 1831, 2716 |
| ApaLI | GTGCAC | 1 cut(s) | 323 |
| ApeKI | GCWGC | 9 cut(s) | 561, 789, 1554, 1713, 1841, 2202, 2240, 2243, 2353 |
| ApoI | RAATTY | 4 cut(s) | 1928, 1963, 2098, 2123 |
| AspLEI | GCGC | 2 cut(s) | 271, 2592 |
| AspS9I | GGNCC | 2 cut(s) | 197, 1832 |
| AsuII | TTCGAA | 1 cut(s) | 2095 |
| AvaI | CYCGRG | 1 cut(s) | 421 |
| AvaII | GGWCC | 1 cut(s) | 197 |
| AxyI | CCTNAGG | 1 cut(s) | 753 |
| BaeGI | GKGCMC | 2 cut(s) | 327, 2230 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2314, 2347 |
| BalI | TGGCCA | 1 cut(s) | 2718 |
| BanI | GGYRCC | 1 cut(s) | 2589 |
| BauI | CACGAG | 3 cut(s) | 642, 1254, 2247 |
| BbsI | GAAGAC | 1 cut(s) | 214 |
| Bbv12I | GWGCWC | 3 cut(s) | 327, 428, 1755 |
| BbvCI | CCTCAGC | 1 cut(s) | 1845 |
| BbvI | GCAGC | 9 cut(s) | 573, 801, 1566, 1725, 1828, 2214, 2252, 2255, 2365 |
| BciT130I | CCWGG | 4 cut(s) | 1292, 1836, 2414, 2544 |
| BclI | TGATCA | 2 cut(s) | 454, 1989 |
| BcoDI | GTCTC | 5 cut(s) | 134, 443, 1043, 1652, 2086 |
| BfmI | CTRYAG | 2 cut(s) | 1948, 2166 |
| BfoI | RGCGCY | 1 cut(s) | 2593 |
| BmcAI | AGTACT | 1 cut(s) | 1738 |
| Bme1390I | CCNGG | 4 cut(s) | 1292, 1836, 2414, 2544 |
| Bme18I | GGWCC | 1 cut(s) | 197 |
| BmeT110I | CYCGRG | 1 cut(s) | 421 |
| BmgT120I | GGNCC | 2 cut(s) | 197, 1832 |
| BmiI | GGNNCC | 6 cut(s) | 858, 984, 1113, 1368, 1494, 2591 |
| BmrFI | CCNGG | 4 cut(s) | 1292, 1836, 2414, 2544 |
| BmsI | GCATC | 7 cut(s) | 229, 1153, 1339, 1406, 1713, 2227, 2293 |
| BpiI | GAAGAC | 1 cut(s) | 214 |
| BpmI | CTGGAG | 2 cut(s) | 688, 1555 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1845 |
| Bpu14I | TTCGAA | 1 cut(s) | 2095 |
| BpuEI | CTTGAG | 2 cut(s) | 1955, 2347 |
| Bsa29I | ATCGAT | 1 cut(s) | 2679 |
| BsaHI | GRCGYC | 3 cut(s) | 2035, 2473, 2590 |
| BsaI | GGTCTC | 2 cut(s) | 134, 1043 |
| BsaJI | CCNNGG | 3 cut(s) | 498, 1834, 2630 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 245, 275 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1703 |
| Bse1I | ACTGG | 4 cut(s) | 279, 705, 1572, 2625 |
| Bse21I | CCTNAGG | 1 cut(s) | 753 |
| Bse3DI | GCAATG | 5 cut(s) | 313, 666, 894, 1023, 1152 |
| BseBI | CCWGG | 4 cut(s) | 1292, 1836, 2414, 2544 |
| BseCI | ATCGAT | 1 cut(s) | 2679 |
| BseDI | CCNNGG | 3 cut(s) | 498, 1834, 2630 |
| BseGI | GGATG | 4 cut(s) | 403, 1800, 1855, 2242 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1703 |
| BseMI | GCAATG | 5 cut(s) | 313, 666, 894, 1023, 1152 |
| BseMII | CTCAG | 6 cut(s) | 383, 767, 870, 1836, 1842, 1857 |
| BseNI | ACTGG | 4 cut(s) | 279, 705, 1572, 2625 |
| BseRI | GAGGAG | 6 cut(s) | 53, 741, 1505, 1883, 1886, 2573 |
| BseSI | GKGCMC | 2 cut(s) | 327, 2230 |
| BseXI | GCAGC | 9 cut(s) | 573, 801, 1566, 1725, 1828, 2214, 2252, 2255, 2365 |
| BseYI | CCCAGC | 2 cut(s) | 2476, 2585 |
| BsgI | GTGCAG | 1 cut(s) | 465 |
| BshFI | GGCC | 9 cut(s) | 569, 695, 923, 1181, 1307, 1433, 1562, 1833, 2718 |
| BshNI | GGYRCC | 1 cut(s) | 2589 |
| BshVI | ATCGAT | 1 cut(s) | 2679 |
| BsiHKAI | GWGCWC | 3 cut(s) | 327, 428, 1755 |
| BsiHKCI | CYCGRG | 1 cut(s) | 421 |
| BsiSI | CCGG | 1 cut(s) | 200 |
| BslFI | GGGAC | 2 cut(s) | 1705, 1876 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1703 |
| BsmAI | GTCTC | 5 cut(s) | 134, 443, 1043, 1652, 2086 |
| BsmFI | GGGAC | 2 cut(s) | 1705, 1876 |
| BsmI | GAATGC | 3 cut(s) | 153, 1883, 2266 |
| BsnI | GGCC | 9 cut(s) | 569, 695, 923, 1181, 1307, 1433, 1562, 1833, 2718 |
| Bso31I | GGTCTC | 2 cut(s) | 134, 1043 |
| BsoBI | CYCGRG | 1 cut(s) | 421 |
| Bsp119I | TTCGAA | 1 cut(s) | 2095 |
| Bsp1286I | GDGCHC | 4 cut(s) | 327, 428, 1755, 2230 |
| Bsp1407I | TGTACA | 1 cut(s) | 2072 |
| Bsp143I | GATC | 6 cut(s) | 454, 492, 1989, 2216, 2578, 2680 |
| Bsp19I | CCATGG | 1 cut(s) | 498 |
| BspACI | CCGC | 5 cut(s) | 272, 815, 1880, 2148, 2380 |
| BspANI | GGCC | 9 cut(s) | 569, 695, 923, 1181, 1307, 1433, 1562, 1833, 2718 |
| BspCNI | CTCAG | 6 cut(s) | 384, 766, 871, 1837, 1841, 1858 |
| BspDI | ATCGAT | 1 cut(s) | 2679 |
| BspHI | TCATGA | 1 cut(s) | 157 |
| BspLI | GGNNCC | 6 cut(s) | 858, 984, 1113, 1368, 1494, 2591 |
| BspMAI | CTGCAG | 1 cut(s) | 2170 |
| BspPI | GGATC | 4 cut(s) | 487, 2224, 2573, 2675 |
| BspQI | GCTCTTC | 2 cut(s) | 1793, 2166 |
| BspT104I | TTCGAA | 1 cut(s) | 2095 |
| BspT107I | GGYRCC | 1 cut(s) | 2589 |
| BspTNI | GGTCTC | 2 cut(s) | 134, 1043 |
| BsrDI | GCAATG | 5 cut(s) | 313, 666, 894, 1023, 1152 |
| BsrGI | TGTACA | 1 cut(s) | 2072 |
| BsrI | ACTGG | 4 cut(s) | 279, 705, 1572, 2625 |
| BssECI | CCNNGG | 3 cut(s) | 498, 1834, 2630 |
| BssMI | GATC | 6 cut(s) | 454, 492, 1989, 2216, 2578, 2680 |
| BssNI | GRCGYC | 3 cut(s) | 2035, 2473, 2590 |
| BssSI | CACGAG | 3 cut(s) | 642, 1254, 2247 |
| BssT1I | CCWWGG | 2 cut(s) | 498, 2630 |
| Bst2BI | CACGAG | 3 cut(s) | 642, 1254, 2247 |
| Bst2UI | CCWGG | 4 cut(s) | 1292, 1836, 2414, 2544 |
| Bst4CI | ACNGT | 4 cut(s) | 220, 329, 2080, 2748 |
| Bst6I | CTCTTC | 4 cut(s) | 15, 87, 1793, 2166 |
| BstACI | GRCGYC | 3 cut(s) | 2035, 2473, 2590 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1630, 2140, 2249 |
| BstAUI | TGTACA | 1 cut(s) | 2072 |
| BstBI | TTCGAA | 1 cut(s) | 2095 |
| BstC8I | GCNNGC | 4 cut(s) | 276, 861, 1878, 2157 |
| BstDEI | CTNAG | 9 cut(s) | 392, 753, 879, 1804, 1828, 1845, 1866, 2231, 2536 |
| BstDSI | CCRYGG | 1 cut(s) | 498 |
| BstEII | GGTNACC | 1 cut(s) | 2704 |
| BstF5I | GGATG | 4 cut(s) | 403, 1800, 1855, 2242 |
| BstH2I | RGCGCY | 1 cut(s) | 2593 |
| BstHHI | GCGC | 2 cut(s) | 271, 2592 |
| BstKTI | GATC | 6 cut(s) | 457, 495, 1992, 2219, 2581, 2683 |
| BstMAI | GTCTC | 5 cut(s) | 134, 443, 1043, 1652, 2086 |
| BstMBI | GATC | 6 cut(s) | 454, 492, 1989, 2216, 2578, 2680 |
| BstNI | CCWGG | 4 cut(s) | 1292, 1836, 2414, 2544 |
| BstNSI | RCATGY | 3 cut(s) | 278, 1759, 2570 |
| BstPI | GGTNACC | 1 cut(s) | 2704 |
| BstSCI | CCNGG | 4 cut(s) | 1290, 1834, 2412, 2542 |
| BstSFI | CTRYAG | 2 cut(s) | 1948, 2166 |
| BstSLI | GKGCMC | 2 cut(s) | 327, 2230 |
| BstV1I | GCAGC | 9 cut(s) | 573, 801, 1566, 1725, 1828, 2214, 2252, 2255, 2365 |
| BstV2I | GAAGAC | 1 cut(s) | 214 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2484 |
| Bsu15I | ATCGAT | 1 cut(s) | 2679 |
| Bsu36I | CCTNAGG | 1 cut(s) | 753 |
| BsuRI | GGCC | 9 cut(s) | 569, 695, 923, 1181, 1307, 1433, 1562, 1833, 2718 |
| BsuTUI | ATCGAT | 1 cut(s) | 2679 |
| BtgI | CCRYGG | 1 cut(s) | 498 |
| BtgZI | GCGATG | 1 cut(s) | 2316 |
| BtsCI | GGATG | 4 cut(s) | 403, 1800, 1855, 2242 |
| BtsI | GCAGTG | 8 cut(s) | 448, 922, 1051, 1173, 1180, 1213, 1306, 1432 |
| Cac8I | GCNNGC | 4 cut(s) | 276, 861, 1878, 2157 |
| CaiI | CAGNNNCTG | 3 cut(s) | 452, 1841, 1865 |
| CciI | TCATGA | 1 cut(s) | 157 |
| CfoI | GCGC | 2 cut(s) | 271, 2592 |
| Cfr13I | GGNCC | 2 cut(s) | 197, 1832 |
| ClaI | ATCGAT | 1 cut(s) | 2679 |
| CseI | GACGC | 3 cut(s) | 1496, 2024, 2481 |
| CsiI | ACCWGGT | 1 cut(s) | 1290 |
| Csp6I | GTAC | 3 cut(s) | 1737, 2073, 2331 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1981, 2016 |
| CviQI | GTAC | 3 cut(s) | 1737, 2073, 2331 |
| DdeI | CTNAG | 9 cut(s) | 392, 753, 879, 1804, 1828, 1845, 1866, 2231, 2536 |
| DinI | GGCGCC | 1 cut(s) | 2591 |
| DpnI | GATC | 6 cut(s) | 456, 494, 1991, 2218, 2580, 2682 |
| DpnII | GATC | 6 cut(s) | 454, 492, 1989, 2216, 2578, 2680 |
| DraI | TTTAAA | 1 cut(s) | 1933 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 413 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 413 |
| EaeI | YGGCCR | 1 cut(s) | 2716 |
| Eam1104I | CTCTTC | 4 cut(s) | 15, 87, 1793, 2166 |
| EarI | CTCTTC | 4 cut(s) | 15, 87, 1793, 2166 |
| Eco130I | CCWWGG | 2 cut(s) | 498, 2630 |
| Eco31I | GGTCTC | 2 cut(s) | 134, 1043 |
| Eco32I | GATATC | 3 cut(s) | 592, 637, 1120 |
| Eco47I | GGWCC | 1 cut(s) | 197 |
| Eco57I | CTGAAG | 4 cut(s) | 66, 255, 566, 849 |
| Eco81I | CCTNAGG | 1 cut(s) | 753 |
| Eco88I | CYCGRG | 1 cut(s) | 421 |
| Eco91I | GGTNACC | 1 cut(s) | 2704 |
| EcoO65I | GGTNACC | 1 cut(s) | 2704 |
| EcoRII | CCWGG | 4 cut(s) | 1290, 1834, 2412, 2542 |
| EcoRV | GATATC | 3 cut(s) | 592, 637, 1120 |
| EcoT14I | CCWWGG | 2 cut(s) | 498, 2630 |
| EgeI | GGCGCC | 1 cut(s) | 2591 |
| EheI | GGCGCC | 1 cut(s) | 2591 |
| ErhI | CCWWGG | 2 cut(s) | 498, 2630 |
| FaqI | GGGAC | 2 cut(s) | 1705, 1876 |
| FauNDI | CATATG | 1 cut(s) | 1584 |
| FbaI | TGATCA | 2 cut(s) | 454, 1989 |
| FokI | GGATG | 4 cut(s) | 410, 1807, 1862, 2249 |
| GlaI | GCGC | 2 cut(s) | 270, 2591 |
| GsaI | CCCAGC | 2 cut(s) | 2480, 2589 |
| GsuI | CTGGAG | 2 cut(s) | 688, 1555 |
| HaeII | RGCGCY | 1 cut(s) | 2593 |
| HaeIII | GGCC | 9 cut(s) | 569, 695, 923, 1181, 1307, 1433, 1562, 1833, 2718 |
| HapII | CCGG | 1 cut(s) | 200 |
| HgaI | GACGC | 3 cut(s) | 1496, 2024, 2481 |
| HhaI | GCGC | 2 cut(s) | 271, 2592 |
| Hin1I | GRCGYC | 3 cut(s) | 2035, 2473, 2590 |
| Hin6I | GCGC | 2 cut(s) | 269, 2590 |
| HinP1I | GCGC | 2 cut(s) | 269, 2590 |
| HincII | GTYRAC | 4 cut(s) | 295, 418, 2497, 2609 |
| HindII | GTYRAC | 4 cut(s) | 295, 418, 2497, 2609 |
| HinfI | GANTC | 7 cut(s) | 206, 314, 1664, 1856, 2188, 2402, 2676 |
| HpaI | GTTAAC | 2 cut(s) | 295, 2497 |
| HpaII | CCGG | 1 cut(s) | 200 |
| Hpy188I | TCNGA | 6 cut(s) | 486, 1402, 1669, 2045, 2578, 2752 |
| Hpy188III | TCNNGA | 8 cut(s) | 101, 158, 233, 644, 1256, 1511, 2555, 2673 |
| Hpy99I | CGWCG | 1 cut(s) | 1512 |
| HpyAV | CCTTC | 9 cut(s) | 527, 532, 541, 1780, 2104, 2288, 2485, 2647, 2679 |
| HpyCH4III | ACNGT | 4 cut(s) | 220, 329, 2080, 2748 |
| HpyCH4IV | ACGT | 2 cut(s) | 1392, 2499 |
| HpyF3I | CTNAG | 9 cut(s) | 392, 753, 879, 1804, 1828, 1845, 1866, 2231, 2536 |
| HpySE526I | ACGT | 2 cut(s) | 1392, 2499 |
| Hsp92I | GRCGYC | 3 cut(s) | 2035, 2473, 2590 |
| HspAI | GCGC | 2 cut(s) | 269, 2590 |
| KasI | GGCGCC | 1 cut(s) | 2589 |
| Ksp22I | TGATCA | 2 cut(s) | 454, 1989 |
| KspAI | GTTAAC | 2 cut(s) | 295, 2497 |
| Kzo9I | GATC | 6 cut(s) | 454, 492, 1989, 2216, 2578, 2680 |
| LguI | GCTCTTC | 2 cut(s) | 1793, 2166 |
| LmnI | GCTCC | 7 cut(s) | 628, 856, 982, 1111, 1492, 1621, 1873 |
| Lsp1109I | GCAGC | 9 cut(s) | 573, 801, 1566, 1725, 1828, 2214, 2252, 2255, 2365 |
| LweI | GCATC | 7 cut(s) | 229, 1153, 1339, 1406, 1713, 2227, 2293 |
| MabI | ACCWGGT | 1 cut(s) | 1290 |
| MaeII | ACGT | 2 cut(s) | 1392, 2499 |
| MaeIII | GTNAC | 4 cut(s) | 2014, 2345, 2638, 2704 |
| MalI | GATC | 6 cut(s) | 456, 494, 1991, 2218, 2580, 2682 |
| MboI | GATC | 6 cut(s) | 454, 492, 1989, 2216, 2578, 2680 |
| MfeI | CAATTG | 1 cut(s) | 2720 |
| MhlI | GDGCHC | 4 cut(s) | 327, 428, 1755, 2230 |
| MlsI | TGGCCA | 1 cut(s) | 2718 |
| MluNI | TGGCCA | 1 cut(s) | 2718 |
| Mly113I | GGCGCC | 1 cut(s) | 2590 |
| MlyI | GAGTC | 1 cut(s) | 1865 |
| MmeI | TCCRAC | 3 cut(s) | 957, 1086, 2023 |
| Mox20I | TGGCCA | 1 cut(s) | 2718 |
| MscI | TGGCCA | 1 cut(s) | 2718 |
| Msp20I | TGGCCA | 1 cut(s) | 2718 |
| MspA1I | CMGCKG | 1 cut(s) | 2585 |
| MspI | CCGG | 1 cut(s) | 200 |
| MspR9I | CCNGG | 4 cut(s) | 1292, 1836, 2414, 2544 |
| MunI | CAATTG | 1 cut(s) | 2720 |
| Mva1269I | GAATGC | 3 cut(s) | 153, 1883, 2266 |
| MvaI | CCWGG | 4 cut(s) | 1292, 1836, 2414, 2544 |
| NarI | GGCGCC | 1 cut(s) | 2590 |
| NcoI | CCATGG | 1 cut(s) | 498 |
| NdeI | CATATG | 1 cut(s) | 1584 |
| NdeII | GATC | 6 cut(s) | 454, 492, 1989, 2216, 2578, 2680 |
| NlaIV | GGNNCC | 6 cut(s) | 858, 984, 1113, 1368, 1494, 2591 |
| NmuCI | GTSAC | 3 cut(s) | 2345, 2638, 2704 |
| NspI | RCATGY | 3 cut(s) | 278, 1759, 2570 |
| NspV | TTCGAA | 1 cut(s) | 2095 |
| PaeI | GCATGC | 1 cut(s) | 278 |
| PagI | TCATGA | 1 cut(s) | 157 |
| PciI | ACATGT | 1 cut(s) | 1755 |
| PciSI | GCTCTTC | 2 cut(s) | 1793, 2166 |
| PctI | GAATGC | 3 cut(s) | 153, 1883, 2266 |
| PfeI | GAWTC | 6 cut(s) | 206, 314, 1664, 2188, 2402, 2676 |
| PflFI | GACNNNGTC | 1 cut(s) | 1037 |
| PfoI | TCCNGGA | 1 cut(s) | 2542 |
| PleI | GAGTC | 1 cut(s) | 1864 |
| PluTI | GGCGCC | 1 cut(s) | 2593 |
| PpsI | GAGTC | 1 cut(s) | 1864 |
| PscI | ACATGT | 1 cut(s) | 1755 |
| Psp1406I | AACGTT | 1 cut(s) | 1392 |
| Psp6I | CCWGG | 4 cut(s) | 1290, 1834, 2412, 2542 |
| PspEI | GGTNACC | 1 cut(s) | 2704 |
| PspFI | CCCAGC | 2 cut(s) | 2476, 2585 |
| PspGI | CCWGG | 4 cut(s) | 1290, 1834, 2412, 2542 |
| PspN4I | GGNNCC | 6 cut(s) | 858, 984, 1113, 1368, 1494, 2591 |
| PspPI | GGNCC | 2 cut(s) | 197, 1832 |
| PstI | CTGCAG | 1 cut(s) | 2170 |
| PstNI | CAGNNNCTG | 3 cut(s) | 452, 1841, 1865 |
| PsyI | GACNNNGTC | 1 cut(s) | 1037 |
| PvuII | CAGCTG | 1 cut(s) | 2585 |
| RsaI | GTAC | 3 cut(s) | 1738, 2074, 2332 |
| RsaNI | GTAC | 3 cut(s) | 1737, 2073, 2331 |
| SapI | GCTCTTC | 2 cut(s) | 1793, 2166 |
| Sau3AI | GATC | 6 cut(s) | 454, 492, 1989, 2216, 2578, 2680 |
| Sau96I | GGNCC | 2 cut(s) | 197, 1832 |
| ScaI | AGTACT | 1 cut(s) | 1738 |
| SchI | GAGTC | 1 cut(s) | 1865 |
| ScrFI | CCNGG | 4 cut(s) | 1292, 1836, 2414, 2544 |
| SduI | GDGCHC | 4 cut(s) | 327, 428, 1755, 2230 |
| SexAI | ACCWGGT | 1 cut(s) | 1290 |
| SfaNI | GCATC | 7 cut(s) | 229, 1153, 1339, 1406, 1713, 2227, 2293 |
| SfcI | CTRYAG | 2 cut(s) | 1948, 2166 |
| SfoI | GGCGCC | 1 cut(s) | 2591 |
| SfuI | TTCGAA | 1 cut(s) | 2095 |
| SinI | GGWCC | 1 cut(s) | 197 |
| SmlI | CTYRAG | 2 cut(s) | 1970, 2326 |
| SmoI | CTYRAG | 2 cut(s) | 1970, 2326 |
| SphI | GCATGC | 1 cut(s) | 278 |
| SsiI | CCGC | 5 cut(s) | 272, 815, 1880, 2148, 2380 |
| SspDI | GGCGCC | 1 cut(s) | 2589 |
| StyD4I | CCNGG | 4 cut(s) | 1290, 1834, 2412, 2542 |
| StyI | CCWWGG | 2 cut(s) | 498, 2630 |
| TaaI | ACNGT | 4 cut(s) | 220, 329, 2080, 2748 |
| TaiI | ACGT | 2 cut(s) | 1395, 2502 |
| TaqI | TCGA | 3 cut(s) | 2095, 2672, 2679 |
| TatI | WGTACW | 2 cut(s) | 1736, 2072 |
| TauI | GCSGC | 2 cut(s) | 274, 1883 |
| TfiI | GAWTC | 6 cut(s) | 206, 314, 1664, 2188, 2402, 2676 |
| TseFI | GTSAC | 3 cut(s) | 2345, 2638, 2704 |
| TseI | GCWGC | 9 cut(s) | 561, 789, 1554, 1713, 1841, 2202, 2240, 2243, 2353 |
| Tsp45I | GTSAC | 3 cut(s) | 2345, 2638, 2704 |
| TspGWI | ACGGA | 2 cut(s) | 1544, 1798 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1037 |
| VneI | GTGCAC | 1 cut(s) | 323 |
| VpaK11BI | GGWCC | 1 cut(s) | 197 |
| XapI | RAATTY | 4 cut(s) | 1928, 1963, 2098, 2123 |
| XceI | RCATGY | 3 cut(s) | 278, 1759, 2570 |
| ZrmI | AGTACT | 1 cut(s) | 1738 |