MD05G1144500.v1.1

BRIGHT, ARID (A/T-rich interaction domain) domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0001717
Physical Location & Seq
Reverse (-)
27611944 .. 27617663
5720 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1144500.v1.1.491

Sequence Viewer

Length: 2832 bp
ATGATAAGAAGTCCTAAAATTGGAAAAACCATTTGCAAAGAGAGCAGCAGAAGCAACCGGCAGCCCAGAGTGTCAGATCAACCAGCACCAGCAGACCACCAGAGGAAGAAAAGGCACAACTCCGGCACCCACCTCCACTTCACCATCCCTGTCCCCAAAAAACGGCAACTGGAAGGAAAGAAAAATATAGGGAAAAAAATGGAGGATGTAGAGAAAGAGGAGGGAAAAATGGTGGAGGATGGAGAAAACAAAAGGGGGGCAGGTACCCATGTTCCTGCACATGTGGAAGGGGGAGAAGAACCAAACCCCAAGACCTTTGATGGTGTAGAAATAGAGACCCTGAAGAGCGTTGATGAAAATGGTGTTGAATTGCCTGGTGATGACATTTCGGGTGCAGTTGATTCGGTTCCCTCTATCCCTGAGACTCCTGAAGATGCTAGCATTGCTGACAAACCGTGGAATGAACTGGATTCCGGTAATGAAACTGATAAGGTTGCGAGTAATGTGGATTCTGGTGTGCATAGTGAGAGTGAGGTTTCTGTGAAGATTGTGAGTGAGGAGAGTGGTGGTGTGAAAGGGGAGGCACTGAAGGATGATTTGGGCAGCAAAGTTAACCCGTCTATTGAATTGGGTGCCAGTGACAAGACTGATAGTCTTGTTGGTGACGGTGGGTCGCCTCACACTGAGGACCCCATAGAGATCGAAAAGGAAGGTGACGGTGTTGAGGAAGAAAAAGCTCTGAAAGAGGGGGTAAGCAGTGAGGCCAACCCTTCCAATGAAGCAGATATAAGTTATAAAACTGATGATGTTGCTTGTGAGATGGAGCTTGATATGCCTCATGATAGTGAGGTTGCAATGGAGAAACTTACAGATGGGGCGACCAGTGAGGCCAACCCCTTCAGCGAAACACGTATCAGTGATGAAATTGATAATATTGTTTCTACAGTGGAGCCTGGTATGCCTTGTGATAGTGAAGTTGCAACAGAAAATCTGATAGATGGGGAGAGCAACAAGGGCAAATCCTCCGATGAGCCAGATAGGACTGCTGAAACTGATAATGTTATTTGTAAGGTGGAGCTTGATACACATGATAGTGAGGTTGAACCAGAGAAACTGAAAGATGGGGTGACCAGTGAGGTCCCCAATATCATTGCTGAAGATGATAATGCTGCTCATAAGGTGGAGCCTGGTATGCCTTGTGATAGTGAAGTTGCAACAGAAAAACTGATAGAACGGGCAAGCAACAAAGCCAAATCCTCCAATGAACCAGATAGTAGTGCTGAAACTGGTAATGTTGTTGGAAGGGTGGAACTCGATATTTCTCGTGATAATGGGGTTACAACGGAGAAACTGATAGATGAGGTGAGCAGTGAGGCCAACCCCTCTGGCGAACCAAATATTAGAGCTGAAGCTGATATTGCAGCTCGTAAGGTGGAGCCTGATATGCCTTCTGACAGTGAGTGTGCAATGGAGAAACTGACCGATAAGGTGAGCAGCGAAGTCAATCCCTCCAGTGAACTGCACATCAGTGCTGAAGCTGATAATGCTATTTGTAAGGCGGAAACTGATAAAATGTCTCATGATAGTGGGGTTGGTATGAAGAAACTGATAGGTGGGTTGAACATCAAGGCCAACCCCTCCAGTGAACCCCATAACAGTGCTGAAACTGATAATGCTGTTAGTAAGGTGGAGCCTGATATGCCTTGTGATAATCAAGTCGAAATGGAGACTGAATCTGATGACGATGGTGATAAAGTTGAGCGATTGAATGGTGGGGTGAGCAACAAAACAAAGTTTTCTTTTCATACTGACATAAACGAGCAACTGCAGAAACCCATATTTTATGTTGGGCGTAAGGTTGGGATGAAGAGCTTAGAACCAAAGAAAACCTTTCTCTTGGATCCAGGTGCTGATGAGGGTGGTGAGTCAGGGACTGAGGAGGAGCAAGCGTCATTCACGAAGGAGGTGATAAATTTATATAAAGAGAAGAACTTGGAATTCAAAGCCCCAAAGTTCTACAAAGAGGAATTAAATTTGCTCAAGTTATGGAGAGCTGTGATCAAACTTGGTGGCTACAACAAGGTTACTACGTGCAAGTTGTGGCGGCAGGTTGGAGAATCATTCAATCCCCCAAAAACCTGTACTACCGTCTCTTGGACTTTTCGAAATTTTTATGAGAAGGCATTACTTGAATTTGAAAGGGATAGACTGAATGGTGGTGAACTTCCTCTTCCTGCAGAGCCTACTAGAGTTGAGAATCGGGCTGATGGCGGCCAGACTTTAGGTTCAGGCAGGGCGCTAAGGGATGCTGCAGCTCGTGCCATGCAGGGTTGGCACTCTCACCGCCATCATGGTAATAATGGTGAGGTTGGAGATGCAATTAATAAGGATAAGCACCTGAGTACCATGCCCAAAAGTGACAAGCAACTAAAAAATTCTGGTTTACTAAAGCGGAAAAAGCCATCTCATATGGATTCTGGTATCCAAGTTGCTGACATGAAAGCTACAAAAACACGAATGGATACAATGGTATTTGATATTGGACCCCCAGCAGATTGGGTAAAGATTAATGTGAAAAAATTTAATGACTGCTTTGAGGTATATGCCTTAGTTCCTGGGCTTCTGCGCGAGGAGGTGCATGTGCAATCTGATCCAGCCGGACGCTTGATTATATCTGGTCAACCAACACAACTGGATAATCCTTGGGGTGTCACACCCTTTAAGAAGGTTGTCAGCCTACCGTCGAGAATTGATCCACATCAGACATCTGCTGTTGTGACCTTGAACGGCCAGTTGTTTGTGCGCATTCCATTTGAACAGTCAGATTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ARID HSP20

Protein Analysis

944

Amino Acids

102.85

Weight (kDa)

4.8

Isoelectric Point (pI)

46.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARID PF01388 649 - 733 6.4e-18 ARID/BRIGHT DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 795
Acc16I TGCGCA 1 cut(s) 2804
Acc36I ACCTGC 2 cut(s) 251, 2098
Acc65I GGTACC 1 cut(s) 263
AccB1I GGYRCC 3 cut(s) 125, 263, 632
AccII CGCG 1 cut(s) 2628
AciI CCGC 5 cut(s) 1559, 2104, 2271, 2344, 2452
AclWI GGATC 4 cut(s) 1895, 1908, 2645, 2747
AcoI YGGCCR 2 cut(s) 2272, 2788
AcsI RAATTY 7 cut(s) 1972, 1997, 2032, 2167, 2192, 2434, 2579
AcuI CTGAAG 7 cut(s) 362, 450, 608, 883, 1176, 1428, 1554
AfaI GTAC 3 cut(s) 265, 2143, 2404
AfiI CCNNNNNNNGG 3 cut(s) 20, 162, 2154
AflIII ACRYGT 2 cut(s) 280, 908
AhdI GACNNNNNGTC 2 cut(s) 651, 670
AjnI CCWGG 5 cut(s) 373, 952, 1186, 1903, 2614
AjuI GAANNNNNNNTTGG 2 cut(s) 581, 613
AleI CACNNNNGTG 1 cut(s) 1527
Alw26I GTCTC 5 cut(s) 329, 416, 1581, 1721, 2155
AlwI GGATC 4 cut(s) 1895, 1908, 2645, 2747
AlwNI CAGNNNCTG 2 cut(s) 1910, 1934
AoxI GGCC 6 cut(s) 762, 888, 1374, 1629, 2272, 2788
ApeKI GCWGC 8 cut(s) 45, 61, 603, 1169, 1421, 1494, 2309, 2312
ApoI RAATTY 7 cut(s) 1972, 1997, 2032, 2167, 2192, 2434, 2579
AseI ATTAAT 2 cut(s) 2382, 2568
Asp718I GGTACC 1 cut(s) 263
AspLEI GCGC 3 cut(s) 2299, 2628, 2805
AspS9I GGNCC 3 cut(s) 688, 1138, 2543
AsuII TTCGAA 1 cut(s) 2164
AsuNHI GCTAGC 1 cut(s) 437
AvaII GGWCC 3 cut(s) 688, 1138, 2543
BaeI ACNNNNGTAYC 6 cut(s) 255, 288, 2386, 2419, 2514, 2547
BamHI GGATCC 1 cut(s) 1900
BanI GGYRCC 3 cut(s) 125, 263, 632
BauI CACGAG 2 cut(s) 1323, 2316
BbvI GCAGC 8 cut(s) 57, 73, 615, 1156, 1433, 1506, 2296, 2324
BceAI ACGGC 2 cut(s) 179, 2803
BcgI CGANNNNNNTGC 2 cut(s) 384, 418
BciT130I CCWGG 5 cut(s) 375, 954, 1188, 1905, 2616
BciVI GTATCC 2 cut(s) 2492, 2515
BclI TGATCA 1 cut(s) 2058
BcoDI GTCTC 5 cut(s) 329, 416, 1581, 1721, 2155
BfaI CTAG 2 cut(s) 438, 2247
BfmI CTRYAG 4 cut(s) 942, 1826, 2235, 2310
BfoI RGCGCY 1 cut(s) 2300
BfuAI ACCTGC 2 cut(s) 251, 2098
BfuI GTATCC 2 cut(s) 2492, 2515
Bme1390I CCNGG 5 cut(s) 375, 954, 1188, 1905, 2616
Bme18I GGWCC 3 cut(s) 688, 1138, 2543
BmeRI GACNNNNNGTC 2 cut(s) 651, 670
BmgT120I GGNCC 3 cut(s) 688, 1138, 2543
BmrFI CCNGG 5 cut(s) 375, 954, 1188, 1905, 2616
BmsI GCATC 3 cut(s) 424, 2296, 2365
BmtI GCTAGC 1 cut(s) 441
BpmI CTGGAG 2 cut(s) 1495, 1624
Bpu10I CCTNAGC 1 cut(s) 2300
Bpu14I TTCGAA 1 cut(s) 2164
BpuEI CTTGAG 1 cut(s) 2024
BsaAI YACGTR 2 cut(s) 911, 2091
BsaBI GATNNNNATC 1 cut(s) 2757
BsaI GGTCTC 1 cut(s) 329
BsaJI CCNNGG 3 cut(s) 455, 2615, 2702
BsaWI WCCGGW 1 cut(s) 473
BsaXI ACNNNNNCTCC 2 cut(s) 1934, 1964
Bsc4I CCNNNNNNNGG 3 cut(s) 20, 162, 2154
Bse118I RCCGGY 1 cut(s) 57
Bse3DI GCAATG 4 cut(s) 441, 861, 1149, 1473
Bse8I GATNNNNATC 1 cut(s) 2757
BseBI CCWGG 5 cut(s) 375, 954, 1188, 1905, 2616
BseDI CCNNGG 3 cut(s) 455, 2615, 2702
BseGI GGATG 6 cut(s) 144, 211, 244, 598, 1869, 2311
BseJI GATNNNNATC 1 cut(s) 2757
BseLI CCNNNNNNNGG 3 cut(s) 20, 162, 2154
BseMI GCAATG 4 cut(s) 441, 861, 1149, 1473
BseMII CTCAG 4 cut(s) 411, 675, 1926, 2390
BseRI GAGGAG 5 cut(s) 233, 572, 1952, 1955, 2645
BseXI GCAGC 8 cut(s) 57, 73, 615, 1156, 1433, 1506, 2296, 2324
BseYI CCCAGC 1 cut(s) 2548
BsgI GTGCAG 3 cut(s) 261, 414, 1505
Bsh1236I CGCG 1 cut(s) 2628
BshFI GGCC 6 cut(s) 764, 890, 1376, 1631, 2274, 2790
BshNI GGYRCC 3 cut(s) 125, 263, 632
BsiSI CCGG 4 cut(s) 58, 123, 474, 2658
BslFI GGGAC 3 cut(s) 137, 1124, 1945
BslI CCNNNNNNNGG 3 cut(s) 20, 162, 2154
BsmAI GTCTC 5 cut(s) 329, 416, 1581, 1721, 2155
BsmBI CGTCTC 1 cut(s) 2155
BsmFI GGGAC 3 cut(s) 137, 1124, 1945
BsmI GAATGC 1 cut(s) 2805
BsnI GGCC 6 cut(s) 764, 890, 1376, 1631, 2274, 2790
Bso31I GGTCTC 1 cut(s) 329
Bsp119I TTCGAA 1 cut(s) 2164
Bsp143I GATC 6 cut(s) 76, 699, 1900, 2058, 2650, 2752
BspACI CCGC 5 cut(s) 1559, 2104, 2271, 2344, 2452
BspANI GGCC 6 cut(s) 764, 890, 1376, 1631, 2274, 2790
BspCNI CTCAG 4 cut(s) 412, 676, 1927, 2391
BspFNI CGCG 1 cut(s) 2628
BspHI TCATGA 2 cut(s) 838, 1579
BspMAI CTGCAG 3 cut(s) 1830, 2239, 2314
BspMI ACCTGC 2 cut(s) 251, 2098
BspOI GCTAGC 1 cut(s) 441
BspPI GGATC 4 cut(s) 1895, 1908, 2645, 2747
BspQI GCTCTTC 2 cut(s) 338, 1862
BspT104I TTCGAA 1 cut(s) 2164
BspT107I GGYRCC 3 cut(s) 125, 263, 632
BspTNI GGTCTC 1 cut(s) 329
BsrDI GCAATG 4 cut(s) 441, 861, 1149, 1473
BsrFI RCCGGY 1 cut(s) 57
BssAI RCCGGY 1 cut(s) 57
BssECI CCNNGG 3 cut(s) 455, 2615, 2702
BssMI GATC 6 cut(s) 76, 699, 1900, 2058, 2650, 2752
BssSI CACGAG 2 cut(s) 1323, 2316
BssT1I CCWWGG 1 cut(s) 2702
Bst2BI CACGAG 2 cut(s) 1323, 2316
Bst2UI CCWGG 5 cut(s) 375, 954, 1188, 1905, 2616
Bst4CI ACNGT 9 cut(s) 456, 668, 719, 946, 1457, 1658, 2149, 2742, 2820
Bst6I CTCTTC 3 cut(s) 338, 1862, 2235
BstAPI GCANNNNNTGC 1 cut(s) 2318
BstBAI YACGTR 2 cut(s) 911, 2091
BstBI TTCGAA 1 cut(s) 2164
BstC8I GCNNGC 3 cut(s) 439, 1240, 1947
BstDEI CTNAG 7 cut(s) 420, 684, 1873, 1935, 2300, 2399, 2608
BstDSI CCRYGG 1 cut(s) 455
BstEII GGTNACC 1 cut(s) 1126
BstF5I GGATG 6 cut(s) 144, 211, 244, 598, 1869, 2311
BstFNI CGCG 1 cut(s) 2628
BstH2I RGCGCY 1 cut(s) 2300
BstHHI GCGC 3 cut(s) 2299, 2628, 2805
BstKTI GATC 6 cut(s) 79, 702, 1903, 2061, 2653, 2755
BstMAI GTCTC 5 cut(s) 329, 416, 1581, 1721, 2155
BstMBI GATC 6 cut(s) 76, 699, 1900, 2058, 2650, 2752
BstNI CCWGG 5 cut(s) 375, 954, 1188, 1905, 2616
BstNSI RCATGY 2 cut(s) 284, 2642
BstPI GGTNACC 1 cut(s) 1126
BstSCI CCNGG 5 cut(s) 373, 952, 1186, 1903, 2614
BstSFI CTRYAG 4 cut(s) 942, 1826, 2235, 2310
BstUI CGCG 1 cut(s) 2628
BstV1I GCAGC 8 cut(s) 57, 73, 615, 1156, 1433, 1506, 2296, 2324
BstX2I RGATCY 1 cut(s) 1900
BstXI CCANNNNNNTGG 1 cut(s) 2556
BstYI RGATCY 1 cut(s) 1900
BsuI GTATCC 2 cut(s) 2492, 2515
BsuRI GGCC 6 cut(s) 764, 890, 1376, 1631, 2274, 2790
BtgI CCRYGG 1 cut(s) 455
BtsCI GGATG 6 cut(s) 144, 211, 244, 598, 1869, 2311
BtsI GCAGTG 2 cut(s) 763, 1375
BveI ACCTGC 2 cut(s) 251, 2098
Cac8I GCNNGC 3 cut(s) 439, 1240, 1947
CaiI CAGNNNCTG 2 cut(s) 1910, 1934
CciI TCATGA 2 cut(s) 838, 1579
CfoI GCGC 3 cut(s) 2299, 2628, 2805
Cfr10I RCCGGY 1 cut(s) 57
Cfr13I GGNCC 3 cut(s) 688, 1138, 2543
CseI GACGC 2 cut(s) 1938, 2670
Csp6I GTAC 3 cut(s) 264, 2142, 2403
CspCI CAANNNNNGTGG 2 cut(s) 2050, 2085
CviQI GTAC 3 cut(s) 264, 2142, 2403
DdeI CTNAG 7 cut(s) 420, 684, 1873, 1935, 2300, 2399, 2608
DpnI GATC 6 cut(s) 78, 701, 1902, 2060, 2652, 2754
DpnII GATC 6 cut(s) 76, 699, 1900, 2058, 2650, 2752
DriI GACNNNNNGTC 2 cut(s) 651, 670
EaeI YGGCCR 2 cut(s) 2272, 2788
Eam1104I CTCTTC 3 cut(s) 338, 1862, 2235
Eam1105I GACNNNNNGTC 2 cut(s) 651, 670
EarI CTCTTC 3 cut(s) 338, 1862, 2235
EciI GGCGGA 1 cut(s) 1574
Eco130I CCWWGG 1 cut(s) 2702
Eco31I GGTCTC 1 cut(s) 329
Eco47I GGWCC 3 cut(s) 688, 1138, 2543
Eco57I CTGAAG 7 cut(s) 362, 450, 608, 883, 1176, 1428, 1554
Eco91I GGTNACC 1 cut(s) 1126
EcoO109I RGGNCCY 2 cut(s) 688, 1138
EcoO65I GGTNACC 1 cut(s) 1126
EcoRI GAATTC 1 cut(s) 1997
EcoRII CCWGG 5 cut(s) 373, 952, 1186, 1903, 2614
EcoT14I CCWWGG 1 cut(s) 2702
ErhI CCWWGG 1 cut(s) 2702
Esp3I CGTCTC 1 cut(s) 2155
FalI AAGNNNNNCTT 2 cut(s) 1874, 1906
FaqI GGGAC 3 cut(s) 137, 1124, 1945
FauNDI CATATG 1 cut(s) 2469
FbaI TGATCA 1 cut(s) 2058
FokI GGATG 6 cut(s) 131, 218, 251, 605, 1876, 2318
FspAI RTGCGCAY 1 cut(s) 2804
FspBI CTAG 2 cut(s) 438, 2247
FspI TGCGCA 1 cut(s) 2804
GlaI GCGC 3 cut(s) 2298, 2627, 2804
GsaI CCCAGC 1 cut(s) 2552
GsuI CTGGAG 2 cut(s) 1495, 1624
HaeII RGCGCY 1 cut(s) 2300
HaeIII GGCC 6 cut(s) 764, 890, 1376, 1631, 2274, 2790
HapII CCGG 4 cut(s) 58, 123, 474, 2658
HgaI GACGC 2 cut(s) 1938, 2670
HhaI GCGC 3 cut(s) 2299, 2628, 2805
Hin6I GCGC 3 cut(s) 2297, 2626, 2803
HinP1I GCGC 3 cut(s) 2297, 2626, 2803
HincII GTYRAC 2 cut(s) 613, 2681
HindII GTYRAC 2 cut(s) 613, 2681
HinfI GANTC 9 cut(s) 401, 424, 470, 509, 1733, 1925, 2117, 2257, 2474
HpaI GTTAAC 1 cut(s) 613
HpaII CCGG 4 cut(s) 58, 123, 474, 2658
Hpy166II GTNNAC 6 cut(s) 613, 1517, 1646, 2222, 2444, 2681
Hpy188I TCNGA 9 cut(s) 76, 741, 993, 1027, 1453, 1738, 2650, 2763, 2824
Hpy188III TCNNGA 6 cut(s) 428, 839, 1325, 1580, 1957, 2745
Hpy8I GTNNAC 6 cut(s) 613, 1517, 1646, 2222, 2444, 2681
Hpy99I CGWCG 1 cut(s) 2746
HpyCH4III ACNGT 9 cut(s) 456, 668, 719, 946, 1457, 1658, 2149, 2742, 2820
HpyCH4IV ACGT 2 cut(s) 910, 2090
HpyF3I CTNAG 7 cut(s) 420, 684, 1873, 1935, 2300, 2399, 2608
HpySE526I ACGT 2 cut(s) 910, 2090
HspAI GCGC 3 cut(s) 2297, 2626, 2803
KpnI GGTACC 1 cut(s) 267
Ksp22I TGATCA 1 cut(s) 2058
KspAI GTTAAC 1 cut(s) 613
Kzo9I GATC 6 cut(s) 76, 699, 1900, 2058, 2650, 2752
LguI GCTCTTC 2 cut(s) 338, 1862
LmnI GCTCC 7 cut(s) 823, 949, 1075, 1183, 1435, 1690, 1942
Lsp1109I GCAGC 8 cut(s) 57, 73, 615, 1156, 1433, 1506, 2296, 2324
LweI GCATC 3 cut(s) 424, 2296, 2365
MaeI CTAG 2 cut(s) 438, 2247
MaeII ACGT 2 cut(s) 910, 2090
MaeIII GTNAC 9 cut(s) 638, 662, 713, 1126, 1336, 2083, 2417, 2710, 2776
MalI GATC 6 cut(s) 78, 701, 1902, 2060, 2652, 2754
MboI GATC 6 cut(s) 76, 699, 1900, 2058, 2650, 2752
MflI RGATCY 1 cut(s) 1900
MlyI GAGTC 2 cut(s) 418, 1934
MmeI TCCRAC 3 cut(s) 1279, 2092, 2350
MseI TTAA 6 cut(s) 612, 2030, 2382, 2568, 2583, 2721
MslI CAYNNNNRTG 5 cut(s) 843, 1092, 1527, 1584, 1656
MspI CCGG 4 cut(s) 58, 123, 474, 2658
MspR9I CCNGG 5 cut(s) 375, 954, 1188, 1905, 2616
Mva1269I GAATGC 1 cut(s) 2805
MvaI CCWGG 5 cut(s) 375, 954, 1188, 1905, 2616
MvnI CGCG 1 cut(s) 2628
NdeI CATATG 1 cut(s) 2469
NdeII GATC 6 cut(s) 76, 699, 1900, 2058, 2650, 2752
NheI GCTAGC 1 cut(s) 437
NmuCI GTSAC 7 cut(s) 638, 662, 713, 1126, 2417, 2710, 2776
NsbI TGCGCA 1 cut(s) 2804
NspI RCATGY 2 cut(s) 284, 2642
NspV TTCGAA 1 cut(s) 2164
OliI CACNNNNGTG 1 cut(s) 1527
PagI TCATGA 2 cut(s) 838, 1579
PciI ACATGT 1 cut(s) 280
PciSI GCTCTTC 2 cut(s) 338, 1862
PctI GAATGC 1 cut(s) 2805
PfeI GAWTC 7 cut(s) 401, 470, 509, 1733, 2117, 2257, 2474
PleI GAGTC 2 cut(s) 418, 1933
PpsI GAGTC 2 cut(s) 418, 1933
Ppu21I YACGTR 2 cut(s) 911, 2091
PpuMI RGGWCCY 2 cut(s) 688, 1138
PscI ACATGT 1 cut(s) 280
PshBI ATTAAT 2 cut(s) 2382, 2568
PsiI TTATAA 1 cut(s) 795
Psp5II RGGWCCY 2 cut(s) 688, 1138
Psp6I CCWGG 5 cut(s) 373, 952, 1186, 1903, 2614
PspEI GGTNACC 1 cut(s) 1126
PspFI CCCAGC 1 cut(s) 2548
PspGI CCWGG 5 cut(s) 373, 952, 1186, 1903, 2614
PspPI GGNCC 3 cut(s) 688, 1138, 2543
PspPPI RGGWCCY 2 cut(s) 688, 1138
PstI CTGCAG 3 cut(s) 1830, 2239, 2314
PstNI CAGNNNCTG 2 cut(s) 1910, 1934
PsuI RGATCY 1 cut(s) 1900
RsaI GTAC 3 cut(s) 265, 2143, 2404
RsaNI GTAC 3 cut(s) 264, 2142, 2403
RseI CAYNNNNRTG 5 cut(s) 843, 1092, 1527, 1584, 1656
SapI GCTCTTC 2 cut(s) 338, 1862
SaqAI TTAA 6 cut(s) 612, 2030, 2382, 2568, 2583, 2721
Sau3AI GATC 6 cut(s) 76, 699, 1900, 2058, 2650, 2752
Sau96I GGNCC 3 cut(s) 688, 1138, 2543
SchI GAGTC 2 cut(s) 418, 1934
ScrFI CCNGG 5 cut(s) 375, 954, 1188, 1905, 2616
SfaNI GCATC 3 cut(s) 424, 2296, 2365
SfcI CTRYAG 4 cut(s) 942, 1826, 2235, 2310
SfuI TTCGAA 1 cut(s) 2164
SinI GGWCC 3 cut(s) 688, 1138, 2543
SmiMI CAYNNNNRTG 5 cut(s) 843, 1092, 1527, 1584, 1656
SmlI CTYRAG 1 cut(s) 2039
SmoI CTYRAG 1 cut(s) 2039
SsiI CCGC 5 cut(s) 1559, 2104, 2271, 2344, 2452
SspI AATATT 2 cut(s) 934, 1399
SspMI CTAG 2 cut(s) 438, 2247
StyD4I CCNGG 5 cut(s) 373, 952, 1186, 1903, 2614
StyI CCWWGG 1 cut(s) 2702
TaaI ACNGT 9 cut(s) 456, 668, 719, 946, 1457, 1658, 2149, 2742, 2820
TaiI ACGT 2 cut(s) 913, 2093
TaqI TCGA 5 cut(s) 702, 1314, 1719, 2164, 2744
TaqII GACCGA 1 cut(s) 1496
TatI WGTACW 1 cut(s) 2141
TauI GCSGC 2 cut(s) 2107, 2274
TfiI GAWTC 7 cut(s) 401, 470, 509, 1733, 2117, 2257, 2474
Tru1I TTAA 6 cut(s) 612, 2030, 2382, 2568, 2583, 2721
Tru9I TTAA 6 cut(s) 612, 2030, 2382, 2568, 2583, 2721
TseFI GTSAC 7 cut(s) 638, 662, 713, 1126, 2417, 2710, 2776
TseI GCWGC 8 cut(s) 45, 61, 603, 1169, 1421, 1494, 2309, 2312
Tsp45I GTSAC 7 cut(s) 638, 662, 713, 1126, 2417, 2710, 2776
TspGWI ACGGA 1 cut(s) 1358
VpaK11BI GGWCC 3 cut(s) 688, 1138, 2543
VspI ATTAAT 2 cut(s) 2382, 2568
XapI RAATTY 7 cut(s) 1972, 1997, 2032, 2167, 2192, 2434, 2579
XceI RCATGY 2 cut(s) 284, 2642
XspI CTAG 2 cut(s) 438, 2247
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.