Rh6AG254000

BRIGHT, ARID (A/T-rich interaction domain) domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0001717
Physical Location & Seq
Reverse (-)
44372616 .. 44377656
5041 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG254000.1

Sequence Viewer

Length: 2121 bp
ATGGAGGAAATAGGAAAAGAAGAGGGGAAAAATATGGAGGAGGGTCTAGAAAACGAAACCCATGACCATGCACAACTTGAAGAGGGTCAAGAACCACCGAAACCCAACTCGGTCGATAGTGTAATAGTGGAGATGCAGAAGCTTATTGGTGACGGTGGTGTTGAAATGCCTGGTGACCTCGAGGGCCCGGTTGAGTTGGCTCCCACTGTCCTCAAAACCGCTGAAGATGCTGAAATTGTTACCGACACTAACAAAGAGCTGCAGGGCGATACTGGAAGTGATAAGCTTGTCAGTAATGTGGATTCTGATGTGCATCGTGAGAGTGAGGTGTCTTTGAAGGTTGAAAGTGATAAGCTTGTCAATAATGTGGACTCTGATGTGCATCGTGAGAGTGAGGTCTCTGTGAAGGTTGAAAGTGATAATCTTGTTGGTAATGTGGATTCTGATGTGCAACGTGAGGGTGAGGTCTGTCCGGAGAATGTAAGTGAAGAGAATGGTGAGAAAGGGGAAGAGCTGAAGGATGTTAAGGTCAGTGAAGCCATCGAATTAGATGCCAGTGCTGAGACTGATAATCTTGTTGGTAATGGGGATGGGGATTCGCACCACACAGCTCAGACTACCATGGACATTGAAAAGGAAGATAATGATGGTGAGGAAGGGAAAGCACTGAAGGATGAGGGGAGCATCAAGGCCAACCCCTCCAATGAACCGCATATGAATGCTGAAACTAATATTGTTGTCAGTGAGGTGGAGCCTGATAGGTGTGGTGATGGTGATGTTGCAAAGGAAAAACTGACGGATGGGGTGAGCAGCAAGGCTAACCCCTCCAGTGAACTGCTTGCAAGTGCTGAAACTGATAAGGTTGTTTGTAAGTTGGAACATGATATGCCTCGTGATACGAAGGTTGCAAGGGAGAAACTGGTGGATGCAGTGAGCAGTAAGGCCAAGCGCTCTCCCAATGAACCACCTAGCAGTGTTAAAGCCAATAATGTTTTTAAGGTAGAGGGCGGTATGCCTCAAGATAATGAGTTATCAATGGAGACTGAATCCGAGTCTGATGACGACGATGAGAAAGGACATGCAGTAACTGGTGGGTTGAGCAGCAAAACAAAGTTCTCTCTACACCATGGCATAAAGGAGCAACATTCAAAATCCAAGTTTCATGTAGGACGAGAGGTTGGGATCAAGAGTTTGGATCCAGGGCGAACCTTTCTCTTGGCTCCAGGTGCAGGAGGTGATGAGTCGGGGACTGAAGAGGAGCAAGCTGAATTCATGAAGGAGGTGGAGAATTTTTATAAAGAGAAGCACTTGGAATTCAAAGCGCCAAAGTTTTACAAAGAGGAATTGAATCTGCTCAAGTTATGGAGAGCTGTGATCAAACTTGGCGGCTATGAAAAGGTTACTTCATGCAAGTTGTGGCGGCAGGTTGGAGAATCATTTAATCCCCCAAAGACTTGTACTACTGTCTCTTGGACTTTTCGGATTTTCTACGAGAAGGCATTACTTGAGTTTGAAAAGCATAGATGGCATGGCAGTGAGCTTGCTCTTCCTGAACCTTCTAGAGTTGAGATTCGGGCTGATGGTAGTCAAACTTGTGGATCAGGCAGGACACTAAGGGATGCTGCAGCTCGTGCCATGCAGGGTTGGCACTCTCAACGCCTTTTTGGAAATGGCGAGGAGAAGCACTTGAGTACTATGCCAAAAAGCGACAAGCAGCTCAAGAGCTCTGGTTTGTTAAAGCGGAAAAAGCTATCTCCTGGGGACTGTGCTGCTCAGATTACTGACATGAAATCGACAAAGCCACGGTTAGATATGACGGTATTCGATATTGGACCGCCAGCAGATTGGGTCAAAATTAATGTGAAACGATTTAGCGACTGCTTTGAGGTATATGCCCTAGTTCCTGGACTTCTGCGTGAGGAGGTGCATGTTCAATCTGATCCAATTGGACGCTTGATTATTTCTGGTCAACCAATGCAACTGGACAATCCTTGGGGTGTCACACCCTTTAAGAAGGTTGTCAGCTTACCTTCGAGAATTGATCCACATCAGACATCTGCTGTAGTGACCTTGAATGGCCAGTTGTTTGTGCGGGTTCCGTTTGAACAGTCAGATTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ARID HSP20

Protein Analysis

706

Amino Acids

77.74

Weight (kDa)

4.86

Isoelectric Point (pI)

37.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARID PF01388 421 - 505 3.6e-19 ARID/BRIGHT DNA binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1296
AbsI CCTCGAGG 1 cut(s) 179
Acc36I ACCTGC 1 cut(s) 1414
AccIII TCCGGA 1 cut(s) 472
AciI CCGC 8 cut(s) 219, 710, 1008, 1386, 1420, 1741, 1835, 2092
AclWI GGATC 6 cut(s) 1190, 1190, 1203, 1606, 1934, 2036
AcoI YGGCCR 1 cut(s) 2077
AcsI RAATTY 3 cut(s) 1268, 1288, 1313
AcuI CTGAAG 4 cut(s) 243, 536, 689, 1272
AfaI GTAC 2 cut(s) 1459, 1693
AfeI AGCGCT 1 cut(s) 950
AfiI CCNNNNNNNGG 1 cut(s) 1229
AjnI CCWGG 5 cut(s) 169, 1198, 1222, 1756, 1903
Alw21I GWGCWC 1 cut(s) 1727
Alw26I GTCTC 4 cut(s) 403, 557, 1034, 1471
AlwI GGATC 6 cut(s) 1190, 1190, 1203, 1606, 1934, 2036
AlwNI CAGNNNCTG 1 cut(s) 1088
Ama87I CYCGRG 1 cut(s) 179
Aor13HI TCCGGA 1 cut(s) 472
Aor51HI AGCGCT 1 cut(s) 950
AoxI GGCC 4 cut(s) 184, 690, 942, 2077
ApaI GGGCCC 1 cut(s) 188
ApeKI GCWGC 7 cut(s) 259, 810, 1101, 1622, 1625, 1714, 1769
ApoI RAATTY 3 cut(s) 1268, 1288, 1313
AseI ATTAAT 1 cut(s) 1857
AspLEI GCGC 2 cut(s) 951, 1324
AspS9I GGNCC 3 cut(s) 184, 185, 1832
AsuC2I CCSGG 1 cut(s) 188
AsuHPI GGTGA 9 cut(s) 161, 185, 473, 509, 662, 779, 785, 817, 1247
AvaI CYCGRG 1 cut(s) 179
AvaII GGWCC 1 cut(s) 1832
BaeGI GKGCMC 1 cut(s) 188
BaeI ACNNNNGTAYC 2 cut(s) 888, 921
BalI TGGCCA 1 cut(s) 2079
BamHI GGATCC 1 cut(s) 1195
BanII GRGCYC 2 cut(s) 188, 1727
BauI CACGAG 2 cut(s) 891, 1629
Bbv12I GWGCWC 1 cut(s) 1727
BbvI GCAGC 7 cut(s) 246, 822, 1113, 1609, 1637, 1726, 1756
BccI CCATC 7 cut(s) 548, 584, 641, 764, 794, 1518, 1574
BcgI CGANNNNNNTGC 2 cut(s) 533, 567
BciT130I CCWGG 5 cut(s) 171, 1200, 1224, 1758, 1905
BclI TGATCA 1 cut(s) 1374
BcnI CCSGG 1 cut(s) 188
BcoDI GTCTC 4 cut(s) 403, 557, 1034, 1471
BfaI CTAG 4 cut(s) 47, 969, 1560, 1898
BfmI CTRYAG 3 cut(s) 260, 1623, 2061
BfoI RGCGCY 2 cut(s) 952, 1325
BfuAI ACCTGC 1 cut(s) 1414
BisI GCNGC 9 cut(s) 260, 811, 1102, 1387, 1421, 1623, 1626, 1715, 1770
BlsI GCNGC 9 cut(s) 261, 812, 1103, 1388, 1422, 1624, 1627, 1716, 1771
BmcAI AGTACT 1 cut(s) 1693
Bme1390I CCNGG 6 cut(s) 171, 188, 1200, 1224, 1758, 1905
Bme18I GGWCC 1 cut(s) 1832
BmeT110I CYCGRG 1 cut(s) 179
BmgT120I GGNCC 3 cut(s) 184, 185, 1832
BmiI GGNNCC 6 cut(s) 186, 201, 753, 1197, 1221, 2097
BmrFI CCNGG 6 cut(s) 171, 188, 1200, 1224, 1758, 1905
BmsI GCATC 8 cut(s) 123, 217, 322, 391, 541, 693, 916, 1609
BpmI CTGGAG 2 cut(s) 811, 1206
BpuEI CTTGAG 5 cut(s) 1002, 1340, 1526, 1703, 1708
BpuMI CCSGG 1 cut(s) 188
BsaBI GATNNNNATC 3 cut(s) 312, 381, 2046
BsaI GGTCTC 1 cut(s) 403
BsaJI CCNNGG 6 cut(s) 621, 1126, 1199, 1757, 1802, 1991
BsaWI WCCGGW 1 cut(s) 472
Bsc4I CCNNNNNNNGG 1 cut(s) 1229
Bse1I ACTGG 7 cut(s) 277, 555, 828, 924, 1093, 1986, 2080
Bse8I GATNNNNATC 3 cut(s) 312, 381, 2046
BseAI TCCGGA 1 cut(s) 472
BseBI CCWGG 5 cut(s) 171, 1200, 1224, 1758, 1905
BseDI CCNNGG 6 cut(s) 621, 1126, 1199, 1757, 1802, 1991
BseGI GGATG 6 cut(s) 526, 595, 679, 805, 931, 1624
BseJI GATNNNNATC 3 cut(s) 312, 381, 2046
BseLI CCNNNNNNNGG 1 cut(s) 1229
BseMII CTCAG 3 cut(s) 552, 626, 1787
BseNI ACTGG 7 cut(s) 277, 555, 828, 924, 1093, 1986, 2080
BseRI GAGGAG 4 cut(s) 53, 1271, 1691, 1934
BseSI GKGCMC 1 cut(s) 188
BseXI GCAGC 7 cut(s) 246, 822, 1113, 1609, 1637, 1726, 1756
BsgI GTGCAG 1 cut(s) 1248
Bsh1285I CGRYCG 1 cut(s) 114
BshFI GGCC 4 cut(s) 186, 692, 944, 2079
BsiEI CGRYCG 1 cut(s) 114
BsiHKAI GWGCWC 1 cut(s) 1727
BsiHKCI CYCGRG 1 cut(s) 179
BsiSI CCGG 2 cut(s) 188, 473
BslFI GGGAC 2 cut(s) 1261, 1775
BslI CCNNNNNNNGG 1 cut(s) 1229
BsmAI GTCTC 4 cut(s) 403, 557, 1034, 1471
BsmFI GGGAC 2 cut(s) 1261, 1775
BsmI GAATGC 1 cut(s) 724
BsnI GGCC 4 cut(s) 186, 692, 944, 2079
Bso31I GGTCTC 1 cut(s) 403
BsoBI CYCGRG 1 cut(s) 179
Bsp120I GGGCCC 1 cut(s) 184
Bsp1286I GDGCHC 2 cut(s) 188, 1727
Bsp13I TCCGGA 1 cut(s) 472
Bsp143I GATC 6 cut(s) 1182, 1195, 1374, 1598, 1939, 2041
Bsp19I CCATGG 2 cut(s) 621, 1126
BspACI CCGC 8 cut(s) 219, 710, 1008, 1386, 1420, 1741, 1835, 2092
BspANI GGCC 4 cut(s) 186, 692, 944, 2079
BspCNI CTCAG 3 cut(s) 553, 625, 1786
BspEI TCCGGA 1 cut(s) 472
BspHI TCATGA 1 cut(s) 1272
BspLI GGNNCC 6 cut(s) 186, 201, 753, 1197, 1221, 2097
BspMAI CTGCAG 2 cut(s) 264, 1627
BspMI ACCTGC 1 cut(s) 1414
BspPI GGATC 6 cut(s) 1190, 1190, 1203, 1606, 1934, 2036
BspQI GCTCTTC 2 cut(s) 504, 1551
BspTNI GGTCTC 1 cut(s) 403
BsrI ACTGG 7 cut(s) 277, 555, 828, 924, 1093, 1986, 2080
BssECI CCNNGG 6 cut(s) 621, 1126, 1199, 1757, 1802, 1991
BssMI GATC 6 cut(s) 1182, 1195, 1374, 1598, 1939, 2041
BssSI CACGAG 2 cut(s) 891, 1629
BssT1I CCWWGG 3 cut(s) 621, 1126, 1991
Bst2BI CACGAG 2 cut(s) 891, 1629
Bst2UI CCWGG 5 cut(s) 171, 1200, 1224, 1758, 1905
Bst4CI ACNGT 7 cut(s) 155, 208, 1465, 1766, 1806, 1819, 2109
Bst6I CTCTTC 6 cut(s) 15, 75, 483, 504, 1248, 1551
BstAPI GCANNNNNTGC 1 cut(s) 1631
BstC8I GCNNGC 4 cut(s) 840, 1263, 1542, 1839
BstDEI CTNAG 4 cut(s) 561, 612, 1613, 1773
BstDSI CCRYGG 3 cut(s) 621, 1126, 1802
BstEII GGTNACC 1 cut(s) 173
BstF5I GGATG 6 cut(s) 526, 595, 679, 805, 931, 1624
BstH2I RGCGCY 2 cut(s) 952, 1325
BstHHI GCGC 2 cut(s) 951, 1324
BstKTI GATC 6 cut(s) 1185, 1198, 1377, 1601, 1942, 2044
BstMAI GTCTC 4 cut(s) 403, 557, 1034, 1471
BstMBI GATC 6 cut(s) 1182, 1195, 1374, 1598, 1939, 2041
BstMCI CGRYCG 1 cut(s) 114
BstMWI GCNNNNNNNGC 6 cut(s) 227, 1226, 1525, 1631, 1645, 1747
BstNI CCWGG 5 cut(s) 171, 1200, 1224, 1758, 1905
BstNSI RCATGY 2 cut(s) 1082, 1931
BstPI GGTNACC 1 cut(s) 173
BstSCI CCNGG 6 cut(s) 169, 186, 1198, 1222, 1756, 1903
BstSFI CTRYAG 3 cut(s) 260, 1623, 2061
BstSLI GKGCMC 1 cut(s) 188
BstV1I GCAGC 7 cut(s) 246, 822, 1113, 1609, 1637, 1726, 1756
BstX2I RGATCY 1 cut(s) 1195
BstXI CCANNNNNNTGG 1 cut(s) 1845
BstYI RGATCY 1 cut(s) 1195
BsuRI GGCC 4 cut(s) 186, 692, 944, 2079
BtgI CCRYGG 3 cut(s) 621, 1126, 1802
BtsCI GGATG 6 cut(s) 526, 595, 679, 805, 931, 1624
BtsI GCAGTG 3 cut(s) 936, 979, 1540
BtsIMutI CAGTG 9 cut(s) 204, 538, 562, 665, 748, 835, 936, 979, 1540
BveI ACCTGC 1 cut(s) 1414
Cac8I GCNNGC 4 cut(s) 840, 1263, 1542, 1839
CaiI CAGNNNCTG 1 cut(s) 1088
CciI TCATGA 1 cut(s) 1272
CfoI GCGC 2 cut(s) 951, 1324
Cfr13I GGNCC 3 cut(s) 184, 185, 1832
CseI GACGC 1 cut(s) 1959
Csp6I GTAC 2 cut(s) 1458, 1692
CviQI GTAC 2 cut(s) 1458, 1692
DdeI CTNAG 4 cut(s) 561, 612, 1613, 1773
DpnI GATC 6 cut(s) 1184, 1197, 1376, 1600, 1941, 2043
DpnII GATC 6 cut(s) 1182, 1195, 1374, 1598, 1939, 2041
EaeI YGGCCR 1 cut(s) 2077
Eam1104I CTCTTC 6 cut(s) 15, 75, 483, 504, 1248, 1551
EarI CTCTTC 6 cut(s) 15, 75, 483, 504, 1248, 1551
Ecl136II GAGCTC 1 cut(s) 1725
Eco130I CCWWGG 3 cut(s) 621, 1126, 1991
Eco24I GRGCYC 2 cut(s) 188, 1727
Eco31I GGTCTC 1 cut(s) 403
Eco47I GGWCC 1 cut(s) 1832
Eco47III AGCGCT 1 cut(s) 950
Eco53kI GAGCTC 1 cut(s) 1725
Eco57I CTGAAG 4 cut(s) 243, 536, 689, 1272
Eco88I CYCGRG 1 cut(s) 179
Eco91I GGTNACC 1 cut(s) 173
EcoICRI GAGCTC 1 cut(s) 1725
EcoO109I RGGNCCY 1 cut(s) 184
EcoO65I GGTNACC 1 cut(s) 173
EcoRI GAATTC 2 cut(s) 1268, 1313
EcoRII CCWGG 5 cut(s) 169, 1198, 1222, 1756, 1903
EcoT14I CCWWGG 3 cut(s) 621, 1126, 1991
EcoT38I GRGCYC 2 cut(s) 188, 1727
ErhI CCWWGG 3 cut(s) 621, 1126, 1991
FaqI GGGAC 2 cut(s) 1261, 1775
FauI CCCGC 1 cut(s) 2085
FauNDI CATATG 1 cut(s) 714
FbaI TGATCA 1 cut(s) 1374
Fnu4HI GCNGC 9 cut(s) 260, 811, 1102, 1387, 1421, 1623, 1626, 1715, 1770
FokI GGATG 6 cut(s) 533, 602, 686, 812, 938, 1631
FriOI GRGCYC 2 cut(s) 188, 1727
Fsp4HI GCNGC 9 cut(s) 260, 811, 1102, 1387, 1421, 1623, 1626, 1715, 1770
FspBI CTAG 4 cut(s) 47, 969, 1560, 1898
GlaI GCGC 2 cut(s) 950, 1323
GluI GCNGC 9 cut(s) 260, 811, 1102, 1387, 1421, 1623, 1626, 1715, 1770
GsuI CTGGAG 2 cut(s) 811, 1206
HaeII RGCGCY 2 cut(s) 952, 1325
HaeIII GGCC 4 cut(s) 186, 692, 944, 2079
HapII CCGG 2 cut(s) 188, 473
HgaI GACGC 1 cut(s) 1959
HhaI GCGC 2 cut(s) 951, 1324
Hin6I GCGC 2 cut(s) 949, 1322
HinP1I GCGC 2 cut(s) 949, 1322
HincII GTYRAC 1 cut(s) 1970
HindII GTYRAC 1 cut(s) 1970
HindIII AAGCTT 3 cut(s) 140, 284, 353
HpaII CCGG 2 cut(s) 188, 473
HphI GGTGA 9 cut(s) 161, 185, 473, 509, 662, 779, 785, 817, 1247
Hpy166II GTNNAC 3 cut(s) 370, 833, 1970
Hpy8I GTNNAC 3 cut(s) 370, 833, 1970
Hpy99I CGWCG 1 cut(s) 1067
HpyCH4III ACNGT 7 cut(s) 155, 208, 1465, 1766, 1806, 1819, 2109
HpyCH4IV ACGT 1 cut(s) 454
HpyF10VI GCNNNNNNNGC 6 cut(s) 227, 1226, 1525, 1631, 1645, 1747
HpyF3I CTNAG 4 cut(s) 561, 612, 1613, 1773
HpySE526I ACGT 1 cut(s) 454
HspAI GCGC 2 cut(s) 949, 1322
Kpn2I TCCGGA 1 cut(s) 472
Ksp22I TGATCA 1 cut(s) 1374
Kzo9I GATC 6 cut(s) 1182, 1195, 1374, 1598, 1939, 2041
LguI GCTCTTC 2 cut(s) 504, 1551
LmnI GCTCC 6 cut(s) 205, 681, 751, 1138, 1225, 1258
Lsp1109I GCAGC 7 cut(s) 246, 822, 1113, 1609, 1637, 1726, 1756
LweI GCATC 8 cut(s) 123, 217, 322, 391, 541, 693, 916, 1609
MaeI CTAG 4 cut(s) 47, 969, 1560, 1898
MaeII ACGT 1 cut(s) 454
MaeIII GTNAC 7 cut(s) 149, 173, 238, 1084, 1399, 1999, 2065
MalI GATC 6 cut(s) 1184, 1197, 1376, 1600, 1941, 2043
MboI GATC 6 cut(s) 1182, 1195, 1374, 1598, 1939, 2041
MboII GAAGA 8 cut(s) 32, 92, 236, 500, 521, 650, 1265, 1538
MfeI CAATTG 1 cut(s) 1944
MflI RGATCY 1 cut(s) 1195
MhlI GDGCHC 2 cut(s) 188, 1727
MlsI TGGCCA 1 cut(s) 2079
MluCI AATT 9 cut(s) 234, 545, 1268, 1288, 1313, 1343, 1854, 1944, 2037
MluNI TGGCCA 1 cut(s) 2079
MlyI GAGTC 3 cut(s) 365, 1061, 1250
MmeI TCCRAC 2 cut(s) 855, 1408
Mox20I TGGCCA 1 cut(s) 2079
MroI TCCGGA 1 cut(s) 472
MscI TGGCCA 1 cut(s) 2079
MseI TTAA 8 cut(s) 525, 978, 996, 1440, 1736, 1857, 2010, 2119
MslI CAYNNNNRTG 3 cut(s) 66, 717, 1533
Msp20I TGGCCA 1 cut(s) 2079
MspA1I CMGCKG 1 cut(s) 221
MspI CCGG 2 cut(s) 188, 473
MspR9I CCNGG 6 cut(s) 171, 188, 1200, 1224, 1758, 1905
MunI CAATTG 1 cut(s) 1944
Mva1269I GAATGC 1 cut(s) 724
MvaI CCWGG 5 cut(s) 171, 1200, 1224, 1758, 1905
MwoI GCNNNNNNNGC 6 cut(s) 227, 1226, 1525, 1631, 1645, 1747
NciI CCSGG 1 cut(s) 188
NcoI CCATGG 2 cut(s) 621, 1126
NdeI CATATG 1 cut(s) 714
NdeII GATC 6 cut(s) 1182, 1195, 1374, 1598, 1939, 2041
NlaIV GGNNCC 6 cut(s) 186, 201, 753, 1197, 1221, 2097
NmuCI GTSAC 4 cut(s) 149, 173, 1999, 2065
NspI RCATGY 2 cut(s) 1082, 1931
PaeR7I CTCGAG 1 cut(s) 179
PagI TCATGA 1 cut(s) 1272
PciSI GCTCTTC 2 cut(s) 504, 1551
PctI GAATGC 1 cut(s) 724
PfeI GAWTC 7 cut(s) 302, 440, 596, 1046, 1348, 1433, 1570
PfoI TCCNGGA 1 cut(s) 1903
PkrI GCNGC 9 cut(s) 261, 812, 1103, 1388, 1422, 1624, 1627, 1716, 1771
PleI GAGTC 3 cut(s) 365, 1060, 1249
PpsI GAGTC 3 cut(s) 365, 1060, 1249
PshBI ATTAAT 1 cut(s) 1857
PsiI TTATAA 1 cut(s) 1296
Psp124BI GAGCTC 1 cut(s) 1727
Psp6I CCWGG 5 cut(s) 169, 1198, 1222, 1756, 1903
PspEI GGTNACC 1 cut(s) 173
PspGI CCWGG 5 cut(s) 169, 1198, 1222, 1756, 1903
PspN4I GGNNCC 6 cut(s) 186, 201, 753, 1197, 1221, 2097
PspOMI GGGCCC 1 cut(s) 184
PspPI GGNCC 3 cut(s) 184, 185, 1832
PspXI VCTCGAGB 1 cut(s) 179
PstI CTGCAG 2 cut(s) 264, 1627
PstNI CAGNNNCTG 1 cut(s) 1088
PsuI RGATCY 1 cut(s) 1195
RsaI GTAC 2 cut(s) 1459, 1693
RsaNI GTAC 2 cut(s) 1458, 1692
RseI CAYNNNNRTG 3 cut(s) 66, 717, 1533
SacI GAGCTC 1 cut(s) 1727
SapI GCTCTTC 2 cut(s) 504, 1551
SaqAI TTAA 8 cut(s) 525, 978, 996, 1440, 1736, 1857, 2010, 2119
SatI GCNGC 9 cut(s) 260, 811, 1102, 1387, 1421, 1623, 1626, 1715, 1770
Sau3AI GATC 6 cut(s) 1182, 1195, 1374, 1598, 1939, 2041
Sau96I GGNCC 3 cut(s) 184, 185, 1832
ScaI AGTACT 1 cut(s) 1693
SchI GAGTC 3 cut(s) 365, 1061, 1250
ScrFI CCNGG 6 cut(s) 171, 188, 1200, 1224, 1758, 1905
SduI GDGCHC 2 cut(s) 188, 1727
SfaNI GCATC 8 cut(s) 123, 217, 322, 391, 541, 693, 916, 1609
SfcI CTRYAG 3 cut(s) 260, 1623, 2061
Sfr274I CTCGAG 1 cut(s) 179
SinI GGWCC 1 cut(s) 1832
SlaI CTCGAG 1 cut(s) 179
SmiMI CAYNNNNRTG 3 cut(s) 66, 717, 1533
SmlI CTYRAG 6 cut(s) 179, 1017, 1355, 1505, 1687, 1718
SmoI CTYRAG 6 cut(s) 179, 1017, 1355, 1505, 1687, 1718
Sse9I AATT 9 cut(s) 234, 545, 1268, 1288, 1313, 1343, 1854, 1944, 2037
SsiI CCGC 8 cut(s) 219, 710, 1008, 1386, 1420, 1741, 1835, 2092
SspI AATATT 1 cut(s) 733
SspMI CTAG 4 cut(s) 47, 969, 1560, 1898
SstI GAGCTC 1 cut(s) 1727
StyD4I CCNGG 6 cut(s) 169, 186, 1198, 1222, 1756, 1903
StyI CCWWGG 3 cut(s) 621, 1126, 1991
TaaI ACNGT 7 cut(s) 155, 208, 1465, 1766, 1806, 1819, 2109
TaiI ACGT 1 cut(s) 457
TaqI TCGA 6 cut(s) 114, 180, 543, 1793, 1824, 2033
TaqII GACCGA 1 cut(s) 100
TasI AATT 9 cut(s) 234, 545, 1268, 1288, 1313, 1343, 1854, 1944, 2037
TatI WGTACW 2 cut(s) 1457, 1691
TauI GCSGC 2 cut(s) 1389, 1423
TfiI GAWTC 7 cut(s) 302, 440, 596, 1046, 1348, 1433, 1570
Tru1I TTAA 8 cut(s) 525, 978, 996, 1440, 1736, 1857, 2010, 2119
Tru9I TTAA 8 cut(s) 525, 978, 996, 1440, 1736, 1857, 2010, 2119
TscAI CASTG 9 cut(s) 211, 538, 562, 672, 748, 835, 936, 979, 1540
TseFI GTSAC 4 cut(s) 149, 173, 1999, 2065
TseI GCWGC 7 cut(s) 259, 810, 1101, 1622, 1625, 1714, 1769
Tsp45I GTSAC 4 cut(s) 149, 173, 1999, 2065
TspDTI ATGAA 9 cut(s) 720, 731, 975, 1151, 1261, 1289, 1395, 1407, 1802
TspGWI ACGGA 2 cut(s) 812, 2088
TspRI CASTG 9 cut(s) 211, 538, 562, 672, 748, 835, 936, 979, 1540
VpaK11BI GGWCC 1 cut(s) 1832
VspI ATTAAT 1 cut(s) 1857
XapI RAATTY 3 cut(s) 1268, 1288, 1313
XbaI TCTAGA 2 cut(s) 46, 1559
XceI RCATGY 2 cut(s) 1082, 1931
XhoI CTCGAG 1 cut(s) 179
XspI CTAG 4 cut(s) 47, 969, 1560, 1898
ZrmI AGTACT 1 cut(s) 1693
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.