AT2G13810

Allinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
5768417 .. 5772266
3850 bp
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UTR
Exon/CDS
Intron
AT2G13810.1

Sequence Viewer

Length: 1371 bp
ATGGTCAGTCTAATGTTCTTTAGTTCGGCCTCACCTTTATGCTCTTCTCCATCAAAAATTCCCAAGGCTAGTTTGGACTTCGAGATGAAGAAACTTGGTGGCAGCACAAAACTTGTTCGGAACGTGAATTTGGAGAAACTAAAGAACAATTATTTGTTTCCTGAAATCAACAGACGTGAACTTGAGCACATTGAAAAGCATCCAAATGTACAATTGATAAGCCTTGGGACTGGTGATACAACAGAGCCTATTCCAGAGCAAATAACCTCACATATGTCTAACTTCGCACATGGCCTATCGACCGTAGAAGGATATAGAGGGTATGGGTTGGAACAAGGAAATAAGACCCTGCGAAAAGCTATTGCTGAAACGTTTTATAGAGATTTGCACGTAAAAAGCAATGAAGTTTTTGTATCAGATGGTGCACAAAGTGATATTTCTCGTCTTCAGCTACTCTTAGGCTCCAACGTCACAATTGCTGTGCAAGATCCTACCTTCCCGGCTTACATAGATTCAAGTGTGATAATCGGTCAGACTGGTCATTTCCATGAAAAAACCAAGAAGTACCAAAATGTTGTTTACATGCCATGTGGGCCTAACAATAGTTTCTTCCCTGATCTGGCTATGACCCCAAGGACCGATGTCATCTTCTTTTGTTCTCCTAATAACCCTACTGGTTATGTTGCATCCAGAAAACAACTACATCAACTAGTTGATTTTGCAAAGACCAATGGGTCCATTATTATATTTGACTCCGCATATGCTGCTTTTATCGAAGATGGTAGTCCACGTTCTATATATGAAATTCCTGGTGCTAGAGAGGTCGCGATTGAAGTTTCATCATTCTCTAAGTTTGCGGGTTTCACCGGTGTTCGGCTTGGTTGGTCTATCATCCCTGATGAGCTCTTGTACTCTAATGGTTTTCCCATTATCAACGATTTCCATCGTATTGTGACCACTTCCTTCAACGGAGCTTCAAATATTGCTCAGGCTGGTGGATTGGCATGCCTTTCTTCTGGTGGCCTTAAGGAGATACGGTCGGTGAACAACTACTACAAAGAGAACAGGAAGATACTGATGGACACTCTAGTCTCGCTTGGCCTCAAGGTTTATGGTGGTGTAAATGCTCCATACTTGTGGGTTCACTTTAAGGGATCAAAATCGTGGGACGTTTTTAATGAGATTCTTGAAAACACTCATATAATAACAGTACCAGGCTCAGGTTTTGGACCCGGTGGAGAAGAGTATTTGAGGATTAGTGGGTTTGGACGCAGAGATCACATTGTTGAAGCATCAAAGAGGTTGCAGAATTTCTTTAACACACGAACCAAACATTTTACTTATCTCTCTTCCACTTCTAATACCAATTAG

Protein Analysis

456

Amino Acids

50.58

Weight (kDa)

8.46

Isoelectric Point (pI)

38.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 72 - 420 1.4e-36 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 733, 1088
AccII CGCG 1 cut(s) 827
AciI CCGC 2 cut(s) 756, 857
AclI AACGTT 1 cut(s) 371
AclWI GGATC 2 cut(s) 482, 1162
AcsI RAATTY 4 cut(s) 57, 127, 804, 1309
AcuI CTGAAG 1 cut(s) 431
AdeI CACNNNGTG 1 cut(s) 431
AfaI GTAC 4 cut(s) 210, 566, 911, 1212
AfiI CCNNNNNNNGG 3 cut(s) 619, 873, 1220
AflII CTTAAG 1 cut(s) 1025
AgeI ACCGGT 1 cut(s) 866
AgsI TTSAA 7 cut(s) 194, 516, 833, 967, 978, 1190, 1289
AhlI ACTAGT 1 cut(s) 709
AjiI CACGTC 1 cut(s) 176
AjnI CCWGG 2 cut(s) 808, 1213
AjuI GAANNNNNNNTTGG 2 cut(s) 113, 145
AluBI AGCT 4 cut(s) 359, 451, 904, 974
AluI AGCT 4 cut(s) 359, 451, 904, 974
Alw21I GWGCWC 3 cut(s) 189, 427, 906
Alw26I GTCTC 1 cut(s) 1096
Alw44I GTGCAC 1 cut(s) 423
AlwI GGATC 2 cut(s) 482, 1162
AoxI GGCC 5 cut(s) 27, 292, 593, 1021, 1099
ApaLI GTGCAC 1 cut(s) 423
ApeKI GCWGC 2 cut(s) 102, 764
ApoI RAATTY 4 cut(s) 57, 127, 804, 1309
AsiGI ACCGGT 1 cut(s) 866
AspS9I GGNCC 4 cut(s) 593, 636, 735, 1229
AsuC2I CCSGG 2 cut(s) 500, 1233
AsuHPI GGTGA 4 cut(s) 24, 245, 856, 1054
AvaII GGWCC 3 cut(s) 636, 735, 1229
BaeGI GKGCMC 1 cut(s) 427
BanII GRGCYC 1 cut(s) 906
BbsI GAAGAC 1 cut(s) 437
Bbv12I GWGCWC 3 cut(s) 189, 427, 906
BbvI GCAGC 2 cut(s) 114, 751
BccI CCATC 5 cut(s) 58, 413, 773, 951, 1072
BciT130I CCWGG 2 cut(s) 810, 1215
BcnI CCSGG 2 cut(s) 500, 1233
BcoDI GTCTC 1 cut(s) 1096
BcuI ACTAGT 1 cut(s) 709
BfaI CTAG 4 cut(s) 69, 710, 816, 1088
BfrI CTTAAG 1 cut(s) 1025
BglI GCCNNNNNGGC 1 cut(s) 592
BisI GCNGC 2 cut(s) 103, 765
BlsI GCNGC 2 cut(s) 104, 766
Bme1390I CCNGG 4 cut(s) 500, 810, 1215, 1233
Bme18I GGWCC 3 cut(s) 636, 735, 1229
BmgBI CACGTC 1 cut(s) 176
BmgT120I GGNCC 4 cut(s) 593, 636, 735, 1229
BmiI GGNNCC 3 cut(s) 463, 736, 1231
BmrFI CCNGG 4 cut(s) 500, 810, 1215, 1233
BmsI GCATC 3 cut(s) 208, 695, 1301
BoxI GACNNNNGTC 1 cut(s) 641
BpiI GAAGAC 1 cut(s) 437
Bpu10I CCTNAGC 2 cut(s) 987, 1219
BpuEI CTTGAG 2 cut(s) 203, 1088
BpuMI CCSGG 2 cut(s) 500, 1233
BsaAI YACGTR 1 cut(s) 391
BsaBI GATNNNNATC 2 cut(s) 942, 1159
BsaJI CCNNGG 3 cut(s) 63, 223, 632
BsaWI WCCGGW 1 cut(s) 866
BsaXI ACNNNNNCTCC 2 cut(s) 1022, 1052
Bsc4I CCNNNNNNNGG 3 cut(s) 619, 873, 1220
Bse118I RCCGGY 1 cut(s) 866
Bse1I ACTGG 3 cut(s) 235, 541, 679
Bse3DI GCAATG 1 cut(s) 406
Bse8I GATNNNNATC 2 cut(s) 942, 1159
BseBI CCWGG 2 cut(s) 810, 1215
BseDI CCNNGG 3 cut(s) 63, 223, 632
BseGI GGATG 3 cut(s) 199, 686, 891
BseJI GATNNNNATC 2 cut(s) 942, 1159
BseLI CCNNNNNNNGG 3 cut(s) 619, 873, 1220
BseMI GCAATG 1 cut(s) 406
BseMII CTCAG 2 cut(s) 1001, 1233
BseNI ACTGG 3 cut(s) 235, 541, 679
BseSI GKGCMC 1 cut(s) 427
BseXI GCAGC 2 cut(s) 114, 751
Bsh1236I CGCG 1 cut(s) 827
Bsh1285I CGRYCG 2 cut(s) 303, 1040
BshFI GGCC 5 cut(s) 29, 294, 595, 1023, 1101
BshTI ACCGGT 1 cut(s) 866
BsiEI CGRYCG 2 cut(s) 303, 1040
BsiHKAI GWGCWC 3 cut(s) 189, 427, 906
BsiSI CCGG 3 cut(s) 500, 867, 1233
BslFI GGGAC 2 cut(s) 241, 1181
BslI CCNNNNNNNGG 3 cut(s) 619, 873, 1220
BsmAI GTCTC 1 cut(s) 1096
BsmFI GGGAC 2 cut(s) 241, 1181
BsnI GGCC 5 cut(s) 29, 294, 595, 1023, 1101
Bsp1286I GDGCHC 3 cut(s) 189, 427, 906
Bsp1407I TGTACA 1 cut(s) 208
Bsp143I GATC 4 cut(s) 487, 616, 1154, 1276
Bsp68I TCGCGA 1 cut(s) 827
BspACI CCGC 2 cut(s) 756, 857
BspANI GGCC 5 cut(s) 29, 294, 595, 1023, 1101
BspCNI CTCAG 2 cut(s) 1000, 1232
BspFNI CGCG 1 cut(s) 827
BspLI GGNNCC 3 cut(s) 463, 736, 1231
BspPI GGATC 2 cut(s) 482, 1162
BspQI GCTCTTC 1 cut(s) 49
BspTI CTTAAG 1 cut(s) 1025
BsrDI GCAATG 1 cut(s) 406
BsrFI RCCGGY 1 cut(s) 866
BsrGI TGTACA 1 cut(s) 208
BsrI ACTGG 3 cut(s) 235, 541, 679
BssAI RCCGGY 1 cut(s) 866
BssECI CCNNGG 3 cut(s) 63, 223, 632
BssMI GATC 4 cut(s) 487, 616, 1154, 1276
BssT1I CCWWGG 3 cut(s) 63, 223, 632
Bst2UI CCWGG 2 cut(s) 810, 1215
Bst4CI ACNGT 3 cut(s) 304, 1038, 1210
Bst6I CTCTTC 3 cut(s) 49, 1236, 1354
BstAFI CTTAAG 1 cut(s) 1025
BstAPI GCANNNNNTGC 1 cut(s) 764
BstAUI TGTACA 1 cut(s) 208
BstBAI YACGTR 1 cut(s) 391
BstC8I GCNNGC 1 cut(s) 1006
BstDEI CTNAG 4 cut(s) 457, 849, 987, 1219
BstF5I GGATG 3 cut(s) 199, 686, 891
BstFNI CGCG 1 cut(s) 827
BstKTI GATC 4 cut(s) 490, 619, 1157, 1279
BstMAI GTCTC 1 cut(s) 1096
BstMBI GATC 4 cut(s) 487, 616, 1154, 1276
BstMCI CGRYCG 2 cut(s) 303, 1040
BstMWI GCNNNNNNNGC 2 cut(s) 592, 764
BstNI CCWGG 2 cut(s) 810, 1215
BstNSI RCATGY 2 cut(s) 586, 1008
BstPAI GACNNNNGTC 1 cut(s) 641
BstSCI CCNGG 4 cut(s) 498, 808, 1213, 1231
BstSLI GKGCMC 1 cut(s) 427
BstUI CGCG 1 cut(s) 827
BstV1I GCAGC 2 cut(s) 114, 751
BstV2I GAAGAC 1 cut(s) 437
BstX2I RGATCY 1 cut(s) 487
BstXI CCANNNNNNTGG 1 cut(s) 1137
BstYI RGATCY 1 cut(s) 487
BsuRI GGCC 5 cut(s) 29, 294, 595, 1023, 1101
BtrI CACGTC 1 cut(s) 176
BtsCI GGATG 3 cut(s) 199, 686, 891
BtuMI TCGCGA 1 cut(s) 827
Cac8I GCNNGC 1 cut(s) 1006
Cfr10I RCCGGY 1 cut(s) 866
Cfr13I GGNCC 4 cut(s) 593, 636, 735, 1229
CseI GACGC 1 cut(s) 1278
Csp6I GTAC 4 cut(s) 209, 565, 910, 1211
CspAI ACCGGT 1 cut(s) 866
CviAII CATG 5 cut(s) 290, 548, 583, 588, 1005
CviQI GTAC 4 cut(s) 209, 565, 910, 1211
DdeI CTNAG 4 cut(s) 457, 849, 987, 1219
DpnI GATC 4 cut(s) 489, 618, 1156, 1278
DpnII GATC 4 cut(s) 487, 616, 1154, 1276
DraIII CACNNNGTG 1 cut(s) 431
DrdI GACNNNNNNGTC 2 cut(s) 733, 1088
DseDI GACNNNNNNGTC 2 cut(s) 733, 1088
Eam1104I CTCTTC 3 cut(s) 49, 1236, 1354
EarI CTCTTC 3 cut(s) 49, 1236, 1354
Ecl136II GAGCTC 1 cut(s) 904
Eco130I CCWWGG 3 cut(s) 63, 223, 632
Eco24I GRGCYC 1 cut(s) 906
Eco47I GGWCC 3 cut(s) 636, 735, 1229
Eco53kI GAGCTC 1 cut(s) 904
Eco57I CTGAAG 1 cut(s) 431
EcoICRI GAGCTC 1 cut(s) 904
EcoRII CCWGG 2 cut(s) 808, 1213
EcoT14I CCWWGG 3 cut(s) 63, 223, 632
EcoT38I GRGCYC 1 cut(s) 906
ErhI CCWWGG 3 cut(s) 63, 223, 632
FaeI CATG 5 cut(s) 293, 551, 586, 591, 1008
FaqI GGGAC 2 cut(s) 241, 1181
FatI CATG 5 cut(s) 289, 547, 582, 587, 1004
FauI CCCGC 1 cut(s) 850
FauNDI CATATG 2 cut(s) 273, 760
Fnu4HI GCNGC 2 cut(s) 103, 765
FokI GGATG 3 cut(s) 186, 673, 878
FriOI GRGCYC 1 cut(s) 906
Fsp4HI GCNGC 2 cut(s) 103, 765
FspBI CTAG 4 cut(s) 69, 710, 816, 1088
GluI GCNGC 2 cut(s) 103, 765
HaeIII GGCC 5 cut(s) 29, 294, 595, 1023, 1101
HapII CCGG 3 cut(s) 500, 867, 1233
HgaI GACGC 1 cut(s) 1278
Hin1II CATG 5 cut(s) 293, 551, 586, 591, 1008
HinfI GANTC 3 cut(s) 512, 752, 1183
HpaII CCGG 3 cut(s) 500, 867, 1233
HphI GGTGA 4 cut(s) 24, 245, 856, 1054
Hpy166II GTNNAC 6 cut(s) 179, 425, 580, 788, 1045, 1144
Hpy188I TCNGA 3 cut(s) 120, 418, 534
Hpy188III TCNNGA 6 cut(s) 82, 161, 254, 690, 826, 1187
Hpy8I GTNNAC 6 cut(s) 179, 425, 580, 788, 1045, 1144
HpyAV CCTTC 3 cut(s) 302, 505, 973
HpyCH4III ACNGT 3 cut(s) 304, 1038, 1210
HpyCH4IV ACGT 7 cut(s) 123, 175, 371, 390, 468, 790, 1170
HpyCH4V TGCA 6 cut(s) 388, 425, 484, 686, 722, 1306
HpyF10VI GCNNNNNNNGC 2 cut(s) 592, 764
HpyF3I CTNAG 4 cut(s) 457, 849, 987, 1219
HpySE526I ACGT 7 cut(s) 123, 175, 371, 390, 468, 790, 1170
Hsp92II CATG 5 cut(s) 293, 551, 586, 591, 1008
Kzo9I GATC 4 cut(s) 487, 616, 1154, 1276
LguI GCTCTTC 1 cut(s) 49
LmnI GCTCC 3 cut(s) 467, 971, 1132
Lsp1109I GCAGC 2 cut(s) 114, 751
LweI GCATC 3 cut(s) 208, 695, 1301
MaeI CTAG 4 cut(s) 69, 710, 816, 1088
MaeII ACGT 7 cut(s) 123, 175, 371, 390, 468, 790, 1170
MaeIII GTNAC 2 cut(s) 469, 952
MalI GATC 4 cut(s) 489, 618, 1156, 1278
MboI GATC 4 cut(s) 487, 616, 1154, 1276
MfeI CAATTG 2 cut(s) 212, 474
MflI RGATCY 1 cut(s) 487
MhlI GDGCHC 3 cut(s) 189, 427, 906
MluCI AATT 8 cut(s) 57, 127, 148, 212, 474, 804, 1309, 1366
MlyI GAGTC 1 cut(s) 746
MmeI TCCRAC 2 cut(s) 309, 489
MnlI CCTC 7 cut(s) 40, 277, 311, 814, 1112, 1245, 1293
MseI TTAA 4 cut(s) 1026, 1149, 1176, 1317
MslI CAYNNNNRTG 4 cut(s) 37, 204, 546, 1135
MspCI CTTAAG 1 cut(s) 1025
MspI CCGG 3 cut(s) 500, 867, 1233
MspR9I CCNGG 4 cut(s) 500, 810, 1215, 1233
MunI CAATTG 2 cut(s) 212, 474
MvaI CCWGG 2 cut(s) 810, 1215
MvnI CGCG 1 cut(s) 827
MwoI GCNNNNNNNGC 2 cut(s) 592, 764
NciI CCSGG 2 cut(s) 500, 1233
NdeI CATATG 2 cut(s) 273, 760
NdeII GATC 4 cut(s) 487, 616, 1154, 1276
NlaIII CATG 5 cut(s) 293, 551, 586, 591, 1008
NlaIV GGNNCC 3 cut(s) 463, 736, 1231
NmuCI GTSAC 2 cut(s) 469, 952
NruI TCGCGA 1 cut(s) 827
NspI RCATGY 2 cut(s) 586, 1008
PaeI GCATGC 1 cut(s) 1008
PciSI GCTCTTC 1 cut(s) 49
PfeI GAWTC 2 cut(s) 512, 1183
PinAI ACCGGT 1 cut(s) 866
PkrI GCNGC 2 cut(s) 104, 766
PleI GAGTC 1 cut(s) 746
PpsI GAGTC 1 cut(s) 746
Ppu21I YACGTR 1 cut(s) 391
PshAI GACNNNNGTC 1 cut(s) 641
Psp124BI GAGCTC 1 cut(s) 906
Psp1406I AACGTT 1 cut(s) 371
Psp6I CCWGG 2 cut(s) 808, 1213
PspGI CCWGG 2 cut(s) 808, 1213
PspN4I GGNNCC 3 cut(s) 463, 736, 1231
PspPI GGNCC 4 cut(s) 593, 636, 735, 1229
PsrI GAACNNNNNNTAC 4 cut(s) 775, 807, 1037, 1069
PsuI RGATCY 1 cut(s) 487
RruI TCGCGA 1 cut(s) 827
RsaI GTAC 4 cut(s) 210, 566, 911, 1212
RsaNI GTAC 4 cut(s) 209, 565, 910, 1211
RseI CAYNNNNRTG 4 cut(s) 37, 204, 546, 1135
SacI GAGCTC 1 cut(s) 906
SapI GCTCTTC 1 cut(s) 49
SaqAI TTAA 4 cut(s) 1026, 1149, 1176, 1317
SatI GCNGC 2 cut(s) 103, 765
Sau3AI GATC 4 cut(s) 487, 616, 1154, 1276
Sau96I GGNCC 4 cut(s) 593, 636, 735, 1229
SchI GAGTC 1 cut(s) 746
ScrFI CCNGG 4 cut(s) 500, 810, 1215, 1233
SduI GDGCHC 3 cut(s) 189, 427, 906
SfaNI GCATC 3 cut(s) 208, 695, 1301
SgrAI CRCCGGYG 1 cut(s) 866
SinI GGWCC 3 cut(s) 636, 735, 1229
SmiMI CAYNNNNRTG 4 cut(s) 37, 204, 546, 1135
SmlI CTYRAG 3 cut(s) 182, 1025, 1103
SmoI CTYRAG 3 cut(s) 182, 1025, 1103
SpeI ACTAGT 1 cut(s) 709
SphI GCATGC 1 cut(s) 1008
Sse9I AATT 8 cut(s) 57, 127, 148, 212, 474, 804, 1309, 1366
SsiI CCGC 2 cut(s) 756, 857
SspI AATATT 1 cut(s) 982
SspMI CTAG 4 cut(s) 69, 710, 816, 1088
SstI GAGCTC 1 cut(s) 906
StyD4I CCNGG 4 cut(s) 498, 808, 1213, 1231
StyI CCWWGG 3 cut(s) 63, 223, 632
TaaI ACNGT 3 cut(s) 304, 1038, 1210
TaiI ACGT 7 cut(s) 126, 178, 374, 393, 471, 793, 1173
TaqI TCGA 3 cut(s) 81, 299, 774
TaqII GACCGA 2 cut(s) 518, 653
TasI AATT 8 cut(s) 57, 127, 148, 212, 474, 804, 1309, 1366
TatI WGTACW 2 cut(s) 208, 909
TfiI GAWTC 2 cut(s) 512, 1183
Tru1I TTAA 4 cut(s) 1026, 1149, 1176, 1317
Tru9I TTAA 4 cut(s) 1026, 1149, 1176, 1317
TseFI GTSAC 2 cut(s) 469, 952
TseI GCWGC 2 cut(s) 102, 764
Tsp45I GTSAC 2 cut(s) 469, 952
TspDTI ATGAA 5 cut(s) 101, 417, 564, 816, 828
TspGWI ACGGA 1 cut(s) 984
Vha464I CTTAAG 1 cut(s) 1025
VneI GTGCAC 1 cut(s) 423
VpaK11BI GGWCC 3 cut(s) 636, 735, 1229
XapI RAATTY 4 cut(s) 57, 127, 804, 1309
XceI RCATGY 2 cut(s) 586, 1008
XcmI CCANNNNNNNNNTGG 1 cut(s) 70
XspI CTAG 4 cut(s) 69, 710, 816, 1088
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.