Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0003005

Physical Location & Seq

Genomic Coordinates Reverse (-)

19245264 .. 19250664

Gene Structure 5401 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00233310.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1494 bp

ATGTCCGTTGACTTCAACAGTTCAACCCTTTCATACGACGTCTTTTTCAATCTGTTTCCACTTGCATCTTCCCAGGTTAGTTCTTGGTTTACAATTTCCTGGAATGCTTCAGGTTCATGCATGGCATTGAGTATGAAAATGCATTATCAGACTGACTACTGCATGAATCTGCATTGGTCCCTGACATTTAATATGGATCAAGGATTCAAGGTTGAGCCTGACGTATACTTTATTAGATCAAGCGTGAAGGCCAAAAAGGAGCGACTTGGTTTCCGTACAAAGGTACCTCGCAGTGTAAACATGGAGAAATTGCGGAATGGTTATTTGTTTCCTGAGATTTCAAAGCTTGAGCTCCAACATATTGAGAAGTACCCAGATGCCAAATTGATAAGCCTTGGAATTGGTGATACAACAGAACCGCTACCAGAAATCATAACCTCAACCATGGCTAATTATGCACATGCTCTTTCAACTGCTGATGGTTATTCAGGGTATGGACCTGAGCAAGGCAACAAGGCATTGCGGAAGGCAATTGCAAAAGCATTCTATAAAGATCTACCAGTAAAAGACACGGAAATTTTTGTATCAGATGGCGCTCAGTGTGATATTACTCGGCTTCAGCTGCTTCTGGGTTCAAATGTGACGATAGCTGTGCAAGATCCATCCTTTCCAGCTTATATAGACTCAAGTGTCATAATAGGTCAGGCAGGTGAGATCAAAGATGAAGCTGGGAGGTATAGGAGCATTGAATACATGAACTGCAGCCCTCACAATAATTTTTTTCCGAACTTATCAACTACTTCAAGAGCAGATATTATATTCTTTTGCTCTCCAAACAATCCAACTGGTTATGCAGCAACAAGGAAGCAATTAGAGCAACTTGTAGAGTTTGCAAGGCAGAATGGATCAATTATCATATATGACTCTGCCTATTCATCTTATATCAGAGATGATAGTCCTCGGTCAATATACGAAATTCCTGGTGCCAGAGAGGTTGCGATTGAGATTTCATCATTCTCCAAATTTGCTGGGTTCACCGGCATCCGTCTAGGTTGGACGGTTGTCCCTGAGGAGCTCCTATACTCCAATGGTTTTCCTGTTATATACGACTTCAATCGTATTGTGTGCACTTGCTTTAATGGAGCATCAAATATTGCTCAAGCTGGTGGATTGGCATGTCTTTCTCCAGTAGGTTTCCAGGCTGTGCATTCTATGGTTGACTACTACATGGAGAATGCAAAGATATTGGTCGAGACATTTGCTTCTCTTGGTTACCAAGTATATGGTGGTGCAAATGCTCCCTACATTTGGGTGCATTTTCCTGGCTCAAGTTCTTGGGATGTATTCACTGAGATTCTTGAAAAAACACACATCCTTACAGTTCCAGGTTCTGGATTTGGTCCAGCAGGTGAAGGGTGTCTCAGAATTAGTTCTTTTGGCCACAGAGAGTGCATCCGAGAGGCCTCGCGTAGGCTCAGAACCCTATTTCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0005488 GO:0005507 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008144 GO:0008150 GO:0008483 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009617 GO:0009627 GO:0009719 GO:0009725 GO:0009735 GO:0009751 GO:0009814 GO:0009862 GO:0009863 GO:0009987 GO:0010033 GO:0010150 GO:0010285 GO:0014070 GO:0016740 GO:0016769 GO:0019842 GO:0023052 GO:0030170 GO:0032501 GO:0032502 GO:0032870 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0042742 GO:0043167 GO:0043168 GO:0043169 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046677 GO:0046872 GO:0046914 GO:0048037 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050662 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070279 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0090693 GO:0097159 GO:0098542 GO:0099402 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00300 ko01100 ko01110 ko01130 ko01230 map00300 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

Aminotran_1_2

Protein Analysis

497

Amino Acids

55.34

Weight (kDa)

5.91

Isoelectric Point (pI)

55.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aminotran_1_2	PF00155	128 - 489	1.2e-37	Aminotransferase class I and II

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G13810
fragaria_vesca	FvH4_5g30860 FvH4_5g30860 FvH4_5g38260 FvH4_5g38260 FvH4_5g38260 FvH4_5g38260 FvH4_5g38260
malus_domestica	MD08G1221500.v1.1 MD15G1412200.v1.1 MD15G1412400.v1.1
prunus_persica	Prupe.1G509100_v2.0.a1 Prupe.1G509100_v2.0.a1 Prupe.1G509500_v2.0.a1 Prupe.1G558600_v2.0.a1
pyrus_communis	pycom08g19210 pycom15g36710
rosa_chinensis	RchiOBHm_Chr7g0226031 RchiOBHm_Chr7g0240251
rosa_laevigata	RLG00000000691 RLG00000001773
rosa_multiflora	Rmu_sc0002676.1_g000021 Rmu_sc0004200.1_g000015
rosa_roxburghii	Rroxscaffold_3G00220280 Rroxscaffold_3G00233310
rosa_rugosa	Rorug07G0234200 Rorug07G0234300 Rorug07G0334400
rosa_samantha	Rh7AG369100 Rh7AG488400 Rh7BG368200 Rh7BG461300 Rh7CG387600 Rh7CG504500 Rh7DG379300 Rh7DG472600
rosa_wichuraiana	Rw0G020940 Rw7G040880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	698, 1397
AasI	GACNNNNNNGTC	1 cut(s)	689
AatII	GACGTC	1 cut(s)	42
Acc36I	ACCTGC	2 cut(s)	698, 1397
Acc65I	GGTACC	1 cut(s)	283
AccB1I	GGYRCC	2 cut(s)	283, 983
AccB7I	CCANNNNNTGG	1 cut(s)	1391
AccI	GTMKAC	1 cut(s)	225
AccII	CGCG	1 cut(s)	1468
AciI	CCGC	3 cut(s)	313, 419, 523
AclWI	GGATC	3 cut(s)	204, 653, 913
AcoI	YGGCCR	1 cut(s)	1438
AcsI	RAATTY	3 cut(s)	576, 975, 1022
AcuI	CTGAAG	2 cut(s)	93, 602
AcyI	GRCGYC	1 cut(s)	39
AfaI	GTAC	3 cut(s)	277, 285, 371
AfiI	CCNNNNNNNGG	5 cut(s)	280, 506, 1308, 1391, 1470
AjnI	CCWGG	6 cut(s)	72, 98, 979, 1197, 1321, 1384
AluBI	AGCT	8 cut(s)	346, 352, 622, 650, 674, 728, 1075, 1163
AluI	AGCT	8 cut(s)	346, 352, 622, 650, 674, 728, 1075, 1163
Alw21I	GWGCWC	3 cut(s)	354, 1077, 1130
Alw26I	GTCTC	2 cut(s)	1247, 1424
Alw44I	GTGCAC	1 cut(s)	1126
AlwI	GGATC	3 cut(s)	204, 653, 913
AlwNI	CAGNNNCTG	1 cut(s)	1391
AoxI	GGCC	3 cut(s)	249, 1438, 1461
ApaLI	GTGCAC	1 cut(s)	1126
ApeKI	GCWGC	3 cut(s)	622, 762, 854
ApoI	RAATTY	3 cut(s)	576, 975, 1022
Asp700I	GAANNNNTTC	1 cut(s)	1429
Asp718I	GGTACC	1 cut(s)	283
AspLEI	GCGC	1 cut(s)	596
AspS9I	GGNCC	3 cut(s)	177, 497, 1400
AsuHPI	GGTGA	4 cut(s)	416, 722, 1027, 1421
AvaII	GGWCC	3 cut(s)	177, 497, 1400
AxyI	CCTNAGG	1 cut(s)	1068
BaeGI	GKGCMC	1 cut(s)	1130
BaeI	ACNNNNGTAYC	2 cut(s)	267, 300
BalI	TGGCCA	1 cut(s)	1440
BanI	GGYRCC	2 cut(s)	283, 983
BanII	GRGCYC	2 cut(s)	354, 1077
Bbv12I	GWGCWC	3 cut(s)	354, 1077, 1130
BbvI	GCAGC	3 cut(s)	609, 774, 866
BccI	CCATC	3 cut(s)	473, 584, 670
BcgI	CGANNNNNNTGC	4 cut(s)	634, 668, 1241, 1275
BciT130I	CCWGG	6 cut(s)	74, 100, 981, 1199, 1323, 1386
BcoDI	GTCTC	2 cut(s)	1247, 1424
BfaI	CTAG	1 cut(s)	1049
BfmI	CTRYAG	1 cut(s)	760
BfoI	RGCGCY	1 cut(s)	597
BfuAI	ACCTGC	2 cut(s)	698, 1397
BglII	AGATCT	1 cut(s)	553
BisI	GCNGC	3 cut(s)	623, 763, 855
BlsI	GCNGC	3 cut(s)	624, 764, 856
Bme1390I	CCNGG	6 cut(s)	74, 100, 981, 1199, 1323, 1386
Bme18I	GGWCC	3 cut(s)	177, 497, 1400
BmgT120I	GGNCC	3 cut(s)	177, 497, 1400
BmiI	GGNNCC	3 cut(s)	179, 285, 985
BmrFI	CCNGG	6 cut(s)	74, 100, 981, 1199, 1323, 1386
BmsI	GCATC	5 cut(s)	74, 367, 1050, 1154, 1461
BoxI	GACNNNNGTC	1 cut(s)	1061
BpmI	CTGGAG	1 cut(s)	1170
Bpu10I	CCTNAGC	1 cut(s)	501
BpuEI	CTTGAG	4 cut(s)	368, 670, 1143, 1312
BsaHI	GRCGYC	1 cut(s)	39
BsaJI	CCNNGG	4 cut(s)	72, 394, 444, 959
Bsc4I	CCNNNNNNNGG	5 cut(s)	280, 506, 1308, 1391, 1470
Bse118I	RCCGGY	1 cut(s)	1037
Bse1I	ACTGG	3 cut(s)	560, 850, 1187
Bse21I	CCTNAGG	1 cut(s)	1068
Bse3DI	GCAATG	1 cut(s)	518
BseBI	CCWGG	6 cut(s)	74, 100, 981, 1199, 1323, 1386
BseDI	CCNNGG	4 cut(s)	72, 394, 444, 959
BseGI	GGATG	5 cut(s)	662, 1041, 1345, 1371, 1452
BseLI	CCNNNNNNNGG	5 cut(s)	280, 506, 1308, 1391, 1470
BseMI	GCAATG	1 cut(s)	518
BseMII	CTCAG	7 cut(s)	324, 492, 611, 1059, 1341, 1435, 1489
BseNI	ACTGG	3 cut(s)	560, 850, 1187
BseRI	GAGGAG	1 cut(s)	1085
BseSI	GKGCMC	1 cut(s)	1130
BseXI	GCAGC	3 cut(s)	609, 774, 866
BseYI	CCCAGC	2 cut(s)	728, 1028
Bsh1236I	CGCG	1 cut(s)	1468
BshFI	GGCC	3 cut(s)	251, 1440, 1463
BshNI	GGYRCC	2 cut(s)	283, 983
BsiHKAI	GWGCWC	3 cut(s)	354, 1077, 1130
BsiSI	CCGG	1 cut(s)	1038
BslFI	GGGAC	2 cut(s)	163, 1049
BslI	CCNNNNNNNGG	5 cut(s)	280, 506, 1308, 1391, 1470
BsmAI	GTCTC	2 cut(s)	1247, 1424
BsmFI	GGGAC	2 cut(s)	163, 1049
BsmI	GAATGC	4 cut(s)	109, 542, 1207, 1240
BsnI	GGCC	3 cut(s)	251, 1440, 1463
Bsp1286I	GDGCHC	3 cut(s)	354, 1077, 1130
Bsp143I	GATC	6 cut(s)	196, 236, 553, 658, 714, 905
Bsp19I	CCATGG	1 cut(s)	444
BspACI	CCGC	3 cut(s)	313, 419, 523
BspANI	GGCC	3 cut(s)	251, 1440, 1463
BspCNI	CTCAG	7 cut(s)	325, 493, 610, 1060, 1342, 1434, 1488
BspFNI	CGCG	1 cut(s)	1468
BspLI	GGNNCC	3 cut(s)	179, 285, 985
BspMAI	CTGCAG	1 cut(s)	764
BspMI	ACCTGC	2 cut(s)	698, 1397
BspPI	GGATC	3 cut(s)	204, 653, 913
BspT107I	GGYRCC	2 cut(s)	283, 983
BsrDI	GCAATG	1 cut(s)	518
BsrFI	RCCGGY	1 cut(s)	1037
BsrI	ACTGG	3 cut(s)	560, 850, 1187
BssAI	RCCGGY	1 cut(s)	1037
BssECI	CCNNGG	4 cut(s)	72, 394, 444, 959
BssMI	GATC	6 cut(s)	196, 236, 553, 658, 714, 905
BssNAI	GTATAC	1 cut(s)	226
BssNI	GRCGYC	1 cut(s)	39
BssT1I	CCWWGG	2 cut(s)	394, 444
Bst1107I	GTATAC	1 cut(s)	226
Bst2UI	CCWGG	6 cut(s)	74, 100, 981, 1199, 1323, 1386
Bst4CI	ACNGT	3 cut(s)	20, 1060, 1381
BstACI	GRCGYC	1 cut(s)	39
BstDEI	CTNAG	7 cut(s)	333, 501, 597, 1068, 1350, 1421, 1475
BstDSI	CCRYGG	1 cut(s)	444
BstEII	GGTNACC	1 cut(s)	1271
BstENI	CCTNNNNNAGG	2 cut(s)	504, 1468
BstF5I	GGATG	5 cut(s)	662, 1041, 1345, 1371, 1452
BstFNI	CGCG	1 cut(s)	1468
BstH2I	RGCGCY	1 cut(s)	597
BstHHI	GCGC	1 cut(s)	596
BstKTI	GATC	6 cut(s)	199, 239, 556, 661, 717, 908
BstMAI	GTCTC	2 cut(s)	1247, 1424
BstMBI	GATC	6 cut(s)	196, 236, 553, 658, 714, 905
BstMWI	GCNNNNNNNGC	3 cut(s)	455, 622, 874
BstNI	CCWGG	6 cut(s)	74, 100, 981, 1199, 1323, 1386
BstNSI	RCATGY	2 cut(s)	464, 1179
BstPAI	GACNNNNGTC	1 cut(s)	1061
BstPI	GGTNACC	1 cut(s)	1271
BstSCI	CCNGG	6 cut(s)	72, 98, 979, 1197, 1321, 1384
BstSFI	CTRYAG	1 cut(s)	760
BstSLI	GKGCMC	1 cut(s)	1130
BstUI	CGCG	1 cut(s)	1468
BstV1I	GCAGC	3 cut(s)	609, 774, 866
BstX2I	RGATCY	2 cut(s)	553, 658
BstXI	CCANNNNNNTGG	1 cut(s)	1283
BstYI	RGATCY	2 cut(s)	553, 658
BstZ17I	GTATAC	1 cut(s)	226
Bsu36I	CCTNAGG	1 cut(s)	1068
BsuRI	GGCC	3 cut(s)	251, 1440, 1463
BtgI	CCRYGG	1 cut(s)	444
BtsCI	GGATG	5 cut(s)	662, 1041, 1345, 1371, 1452
BtsI	GCAGTG	1 cut(s)	298
BtsIMutI	CAGTG	3 cut(s)	298, 605, 1347
BveI	ACCTGC	2 cut(s)	698, 1397
CaiI	CAGNNNCTG	1 cut(s)	1391
CfoI	GCGC	1 cut(s)	596
Cfr10I	RCCGGY	1 cut(s)	1037
Cfr13I	GGNCC	3 cut(s)	177, 497, 1400
Csp6I	GTAC	3 cut(s)	276, 284, 370
CviAII	CATG	9 cut(s)	117, 121, 163, 301, 445, 461, 754, 1176, 1228
CviQI	GTAC	3 cut(s)	276, 284, 370
DdeI	CTNAG	7 cut(s)	333, 501, 597, 1068, 1350, 1421, 1475
DpnI	GATC	6 cut(s)	198, 238, 555, 660, 716, 907
DpnII	GATC	6 cut(s)	196, 236, 553, 658, 714, 905
DrdI	GACNNNNNNGTC	1 cut(s)	689
DseDI	GACNNNNNNGTC	1 cut(s)	689
EaeI	YGGCCR	1 cut(s)	1438
Ecl136II	GAGCTC	2 cut(s)	352, 1075
Eco130I	CCWWGG	2 cut(s)	394, 444
Eco147I	AGGCCT	1 cut(s)	1463
Eco24I	GRGCYC	2 cut(s)	354, 1077
Eco47I	GGWCC	3 cut(s)	177, 497, 1400
Eco53kI	GAGCTC	2 cut(s)	352, 1075
Eco57I	CTGAAG	2 cut(s)	93, 602
Eco81I	CCTNAGG	1 cut(s)	1068
Eco91I	GGTNACC	1 cut(s)	1271
EcoICRI	GAGCTC	2 cut(s)	352, 1075
EcoNI	CCTNNNNNAGG	2 cut(s)	504, 1468
EcoO65I	GGTNACC	1 cut(s)	1271
EcoRII	CCWGG	6 cut(s)	72, 98, 979, 1197, 1321, 1384
EcoT14I	CCWWGG	2 cut(s)	394, 444
EcoT22I	ATGCAT	2 cut(s)	122, 144
EcoT38I	GRGCYC	2 cut(s)	354, 1077
ErhI	CCWWGG	2 cut(s)	394, 444
FaeI	CATG	9 cut(s)	120, 124, 166, 304, 448, 464, 757, 1179, 1231
FaqI	GGGAC	2 cut(s)	163, 1049
FatI	CATG	9 cut(s)	116, 120, 162, 300, 444, 460, 753, 1175, 1227
FblI	GTMKAC	1 cut(s)	225
Fnu4HI	GCNGC	3 cut(s)	623, 763, 855
FokI	GGATG	5 cut(s)	649, 1028, 1352, 1358, 1439
FriOI	GRGCYC	2 cut(s)	354, 1077
Fsp4HI	GCNGC	3 cut(s)	623, 763, 855
FspBI	CTAG	1 cut(s)	1049
GlaI	GCGC	1 cut(s)	595
GluI	GCNGC	3 cut(s)	623, 763, 855
GsaI	CCCAGC	2 cut(s)	732, 1032
GsuI	CTGGAG	1 cut(s)	1170
HaeII	RGCGCY	1 cut(s)	597
HaeIII	GGCC	3 cut(s)	251, 1440, 1463
HapII	CCGG	1 cut(s)	1038
HhaI	GCGC	1 cut(s)	596
Hin1I	GRCGYC	1 cut(s)	39
Hin1II	CATG	9 cut(s)	120, 124, 166, 304, 448, 464, 757, 1179, 1231
Hin6I	GCGC	1 cut(s)	594
HinP1I	GCGC	1 cut(s)	594
HincII	GTYRAC	2 cut(s)	10, 1219
HindII	GTYRAC	2 cut(s)	10, 1219
HindIII	AAGCTT	1 cut(s)	344
HinfI	GANTC	5 cut(s)	166, 204, 683, 923, 1354
HpaII	CCGG	1 cut(s)	1038
HphI	GGTGA	4 cut(s)	416, 722, 1027, 1421
Hpy166II	GTNNAC	7 cut(s)	10, 90, 226, 298, 1035, 1128, 1219
Hpy188I	TCNGA	7 cut(s)	150, 589, 786, 947, 1424, 1457, 1478
Hpy188III	TCNNGA	5 cut(s)	332, 804, 1252, 1358, 1392
Hpy8I	GTNNAC	7 cut(s)	10, 90, 226, 298, 1035, 1128, 1219
Hpy99I	CGWCG	1 cut(s)	41
HpyAV	CCTTC	3 cut(s)	241, 520, 1406
HpyCH4III	ACNGT	3 cut(s)	20, 1060, 1381
HpyCH4IV	ACGT	2 cut(s)	39, 222
HpyF10VI	GCNNNNNNNGC	3 cut(s)	455, 622, 874
HpyF3I	CTNAG	7 cut(s)	333, 501, 597, 1068, 1350, 1421, 1475
HpySE526I	ACGT	2 cut(s)	39, 222
Hsp92I	GRCGYC	1 cut(s)	39
Hsp92II	CATG	9 cut(s)	120, 124, 166, 304, 448, 464, 757, 1179, 1231
HspAI	GCGC	1 cut(s)	594
KpnI	GGTACC	1 cut(s)	287
Kzo9I	GATC	6 cut(s)	196, 236, 553, 658, 714, 905
LmnI	GCTCC	7 cut(s)	259, 357, 741, 1072, 1080, 1142, 1303
Lsp1109I	GCAGC	3 cut(s)	609, 774, 866
LweI	GCATC	5 cut(s)	74, 367, 1050, 1154, 1461
MaeI	CTAG	1 cut(s)	1049
MaeII	ACGT	2 cut(s)	39, 222
MaeIII	GTNAC	2 cut(s)	640, 1271
MalI	GATC	6 cut(s)	198, 238, 555, 660, 716, 907
MboI	GATC	6 cut(s)	196, 236, 553, 658, 714, 905
MboII	GAAGA	1 cut(s)	60
MfeI	CAATTG	1 cut(s)	531
MflI	RGATCY	2 cut(s)	553, 658
MhlI	GDGCHC	3 cut(s)	354, 1077, 1130
MlsI	TGGCCA	1 cut(s)	1440
MluNI	TGGCCA	1 cut(s)	1440
MlyI	GAGTC	2 cut(s)	677, 917
MmeI	TCCRAC	3 cut(s)	379, 866, 1034
MnlI	CCTC	9 cut(s)	297, 448, 726, 777, 969, 985, 1063, 1453, 1474
Mox20I	TGGCCA	1 cut(s)	1440
Mph1103I	ATGCAT	2 cut(s)	122, 144
MroXI	GAANNNNTTC	1 cut(s)	1429
MscI	TGGCCA	1 cut(s)	1440
MseI	TTAA	2 cut(s)	189, 1137
MslI	CAYNNNNRTG	1 cut(s)	1310
Msp20I	TGGCCA	1 cut(s)	1440
MspA1I	CMGCKG	1 cut(s)	622
MspI	CCGG	1 cut(s)	1038
MspR9I	CCNGG	6 cut(s)	74, 100, 981, 1199, 1323, 1386
MunI	CAATTG	1 cut(s)	531
Mva1269I	GAATGC	4 cut(s)	109, 542, 1207, 1240
MvaI	CCWGG	6 cut(s)	74, 100, 981, 1199, 1323, 1386
MvnI	CGCG	1 cut(s)	1468
MwoI	GCNNNNNNNGC	3 cut(s)	455, 622, 874
NcoI	CCATGG	1 cut(s)	444
NdeII	GATC	6 cut(s)	196, 236, 553, 658, 714, 905
NlaIII	CATG	9 cut(s)	120, 124, 166, 304, 448, 464, 757, 1179, 1231
NlaIV	GGNNCC	3 cut(s)	179, 285, 985
NmeAIII	GCCGAG	1 cut(s)	592
NmuCI	GTSAC	1 cut(s)	640
NsiI	ATGCAT	2 cut(s)	122, 144
NspI	RCATGY	2 cut(s)	464, 1179
PaqCI	CACCTGC	2 cut(s)	698, 1397
PceI	AGGCCT	1 cut(s)	1463
PctI	GAATGC	4 cut(s)	109, 542, 1207, 1240
PdmI	GAANNNNTTC	1 cut(s)	1429
PfeI	GAWTC	3 cut(s)	166, 204, 1354
PflMI	CCANNNNNTGG	1 cut(s)	1391
PfoI	TCCNGGA	1 cut(s)	98
PkrI	GCNGC	3 cut(s)	624, 764, 856
PleI	GAGTC	2 cut(s)	677, 917
PpsI	GAGTC	2 cut(s)	677, 917
PshAI	GACNNNNGTC	1 cut(s)	1061
Psp124BI	GAGCTC	2 cut(s)	354, 1077
Psp6I	CCWGG	6 cut(s)	72, 98, 979, 1197, 1321, 1384
PspEI	GGTNACC	1 cut(s)	1271
PspFI	CCCAGC	2 cut(s)	728, 1028
PspGI	CCWGG	6 cut(s)	72, 98, 979, 1197, 1321, 1384
PspN4I	GGNNCC	3 cut(s)	179, 285, 985
PspPI	GGNCC	3 cut(s)	177, 497, 1400
PstI	CTGCAG	1 cut(s)	764
PstNI	CAGNNNCTG	1 cut(s)	1391
PsuI	RGATCY	2 cut(s)	553, 658
PvuII	CAGCTG	1 cut(s)	622
RsaI	GTAC	3 cut(s)	277, 285, 371
RsaNI	GTAC	3 cut(s)	276, 284, 370
RseI	CAYNNNNRTG	1 cut(s)	1310
SacI	GAGCTC	2 cut(s)	354, 1077
SaqAI	TTAA	2 cut(s)	189, 1137
SatI	GCNGC	3 cut(s)	623, 763, 855
Sau3AI	GATC	6 cut(s)	196, 236, 553, 658, 714, 905
Sau96I	GGNCC	3 cut(s)	177, 497, 1400
SchI	GAGTC	2 cut(s)	677, 917
ScrFI	CCNGG	6 cut(s)	74, 100, 981, 1199, 1323, 1386
SduI	GDGCHC	3 cut(s)	354, 1077, 1130
SfaNI	GCATC	5 cut(s)	74, 367, 1050, 1154, 1461
SfcI	CTRYAG	1 cut(s)	760
SinI	GGWCC	3 cut(s)	177, 497, 1400
SmiMI	CAYNNNNRTG	1 cut(s)	1310
SmlI	CTYRAG	4 cut(s)	347, 685, 1158, 1327
SmoI	CTYRAG	4 cut(s)	347, 685, 1158, 1327
SseBI	AGGCCT	1 cut(s)	1463
SsiI	CCGC	3 cut(s)	313, 419, 523
SspI	AATATT	1 cut(s)	1153
SspMI	CTAG	1 cut(s)	1049
SstI	GAGCTC	2 cut(s)	354, 1077
StuI	AGGCCT	1 cut(s)	1463
StyD4I	CCNGG	6 cut(s)	72, 98, 979, 1197, 1321, 1384
StyI	CCWWGG	2 cut(s)	394, 444
TaaI	ACNGT	3 cut(s)	20, 1060, 1381
TaiI	ACGT	2 cut(s)	42, 225
TaqI	TCGA	1 cut(s)	1251
TaqII	GACCGA	1 cut(s)	951
TfiI	GAWTC	3 cut(s)	166, 204, 1354
Tru1I	TTAA	2 cut(s)	189, 1137
Tru9I	TTAA	2 cut(s)	189, 1137
TscAI	CASTG	3 cut(s)	298, 605, 1354
TseFI	GTSAC	1 cut(s)	640
TseI	GCWGC	3 cut(s)	622, 762, 854
Tsp45I	GTSAC	1 cut(s)	640
TspDTI	ATGAA	8 cut(s)	21, 105, 149, 179, 738, 770, 924, 999
TspGWI	ACGGA	3 cut(s)	263, 587, 1034
TspRI	CASTG	3 cut(s)	298, 605, 1354
Van91I	CCANNNNNTGG	1 cut(s)	1391
VneI	GTGCAC	1 cut(s)	1126
VpaK11BI	GGWCC	3 cut(s)	177, 497, 1400
XagI	CCTNNNNNAGG	2 cut(s)	504, 1468
XapI	RAATTY	3 cut(s)	576, 975, 1022
XceI	RCATGY	2 cut(s)	464, 1179
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1283
XmiI	GTMKAC	1 cut(s)	225
XmnI	GAANNNNTTC	1 cut(s)	1429
XspI	CTAG	1 cut(s)	1049
ZraI	GACGTC	1 cut(s)	40
Zsp2I	ATGCAT	2 cut(s)	122, 144

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.