Rh7DG472600

Aminotransferase class I and II

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
67654895 .. 67658221
3327 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG472600.1

Sequence Viewer

Length: 1374 bp
ATGAATTATCTTCAATTTTCGTCTCGTGTTTGCATGCCTTCTTGTATTTCATCACAGCCAAAAACAATCTGGACCAGTTCAAACTCTGAAAATGAGAGCAAAGTTGGGAAGCTATTACAATCTCAAAAAGTCACAGGTCATTGCACAAAAGTCTCGCGCAGTGTCAATATGGAGAACTTGCAAAACGAATATTTGTTTCCAGAGATATTCATGCGCGAGTTTCTGCATACTCAGAAGTACCCACATGCAAGAGTAATTAGACTTGGTATAGGTAATACTACAGAACCTATACCAGACATCATCACATCTGCTATGGCTGAGCATGCACATGCTCTATCAACAGTTGAAGGTTACAGAGGGTACGGAGCTGAGCAAGGCCACATGGCATTGAGAATGTCAATTGCAGAAAGATTCTACAAGAATATGGGCATAGAAGGCAATGAGGTGTTTGTATCAGATGGTGCCCAATGTGACATTTCTCGCCTTCAAATGCTTTTCGGTTCCAACGTGACAGTAGCTGTGCAAGACCCTTCTTTCCCGGCATACATAGATTCTAGTGTCATTGCGGGTCGAGCTGGCAACTTTCAGGAGGAAACCGGGAAGTATAAGAACATTGTCTACCTCAATTGCAGACCTGAGAATAATTTTTTTCCCGACTTATCAACTGCTTCAAGGGCGGATCTCATATTTTTCTGCTCTCCAAACAATCCAACTGGAAATGCTGCATCATGGCATCAACTAAAGCAACTGGTGGAGTTTGCTAAAGCAAATGGATCAATCATAGTTTATGACTCCTCATATGCTGCTTATATATCAGATGGAAGCCCAAGATCAATTTACGAAATTCCTGGTGCCAGAGAGGTTGCAATTGAAATATCTTCCTTCTCCAAATTTGCGGGGTTCACAGGAGTCCGACTTGGTTGGACGGTTGTCCCTGAAGAGTTGTTGTATGCAAATGGATTTCCTGTCATAAAAGATTATAACCGCATAGTGTGCACCTGCTTCAATGGTGCATCAAATATAGCTCAGGTTGGGGGGTTAGCATGCCTTTCTGCAGAAGGTTATCAGGCTATAACAAATGTGGTTGACTACTACAAGGAGAATGCAAAAATCATTATCGATACATTCAGAGCACTTGGGTTGAAGGTGTATGGAGGCAAAAATGCTCCTTATATATGGGTACATTTTCCAGGGATGAGTTCATGGGATGTGTTCAATCAAATTCTTGAAAAGACACACATAGTGACCATACCAGGAAAGGGATTTGGTCCTGAAGGTGAAGGGTATATCAGAGTTGGTGCTTTTGGCCACAGAGAAACCATATTGGAAGCTTCAGCAAGGCTAAAGAATTTTTTTGTAACTGATAATATTTGA

Protein Analysis

457

Amino Acids

50.59

Weight (kDa)

6.38

Isoelectric Point (pI)

39.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_1_2 PF00155 85 - 445 1.6e-32 Aminotransferase class I and II
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 981
AarI CACCTGC 1 cut(s) 1007
Acc36I ACCTGC 1 cut(s) 1007
AccB1I GGYRCC 2 cut(s) 461, 851
AccI GTMKAC 1 cut(s) 618
AccII CGCG 2 cut(s) 157, 216
AciI CCGC 4 cut(s) 566, 677, 896, 985
AclWI GGATC 2 cut(s) 687, 781
AcoI YGGCCR 1 cut(s) 1306
AcsI RAATTY 4 cut(s) 843, 890, 1221, 1348
AcuI CTGAAG 3 cut(s) 957, 1293, 1317
AdeI CACNNNGTG 1 cut(s) 1243
AfaI GTAC 3 cut(s) 239, 362, 1182
AfiI CCNNNNNNNGG 1 cut(s) 1259
AjnI CCWGG 3 cut(s) 847, 1189, 1252
AluBI AGCT 6 cut(s) 112, 368, 518, 575, 1025, 1331
AluI AGCT 6 cut(s) 112, 368, 518, 575, 1025, 1331
Alw21I GWGCWC 2 cut(s) 998, 1135
Alw26I GTCTC 2 cut(s) 27, 157
Alw44I GTGCAC 1 cut(s) 994
AlwI GGATC 2 cut(s) 687, 781
AlwNI CAGNNNCTG 1 cut(s) 518
AoxI GGCC 2 cut(s) 376, 1306
ApaLI GTGCAC 1 cut(s) 994
ApeKI GCWGC 2 cut(s) 722, 803
ApoI RAATTY 4 cut(s) 843, 890, 1221, 1348
AspLEI GCGC 2 cut(s) 159, 216
AspS9I GGNCC 2 cut(s) 72, 1268
AsuC2I CCSGG 2 cut(s) 539, 598
AsuHPI GGTGA 1 cut(s) 1289
AvaII GGWCC 2 cut(s) 72, 1268
BaeGI GKGCMC 2 cut(s) 466, 998
BalI TGGCCA 1 cut(s) 1308
BanI GGYRCC 2 cut(s) 461, 851
BauI CACGAG 1 cut(s) 24
Bbv12I GWGCWC 2 cut(s) 998, 1135
BbvI GCAGC 2 cut(s) 709, 790
BccI CCATC 2 cut(s) 452, 812
BciT130I CCWGG 3 cut(s) 849, 1191, 1254
BcnI CCSGG 2 cut(s) 539, 598
BcoDI GTCTC 2 cut(s) 27, 157
BfaI CTAG 1 cut(s) 555
BfmI CTRYAG 2 cut(s) 279, 1053
BfuAI ACCTGC 1 cut(s) 1007
BisI GCNGC 2 cut(s) 723, 804
BlpI GCTNAGC 2 cut(s) 318, 369
BlsI GCNGC 2 cut(s) 724, 805
Bme1390I CCNGG 5 cut(s) 539, 598, 849, 1191, 1254
Bme18I GGWCC 2 cut(s) 72, 1268
BmgT120I GGNCC 2 cut(s) 72, 1268
BmiI GGNNCC 3 cut(s) 463, 502, 853
BmrFI CCNGG 5 cut(s) 539, 598, 849, 1191, 1254
BmsI GCATC 3 cut(s) 734, 742, 1022
BoxI GACNNNNGTC 1 cut(s) 929
Bpu10I CCTNAGC 1 cut(s) 1026
Bpu1102I GCTNAGC 2 cut(s) 318, 369
BpuMI CCSGG 2 cut(s) 539, 598
Bsa29I ATCGAT 1 cut(s) 1119
BsaJI CCNNGG 1 cut(s) 1190
Bsc4I CCNNNNNNNGG 1 cut(s) 1259
Bse1I ACTGG 3 cut(s) 75, 718, 753
Bse3DI GCAATG 3 cut(s) 139, 445, 561
BseBI CCWGG 3 cut(s) 849, 1191, 1254
BseCI ATCGAT 1 cut(s) 1119
BseDI CCNNGG 1 cut(s) 1190
BseGI GGATG 2 cut(s) 1200, 1213
BseLI CCNNNNNNNGG 1 cut(s) 1259
BseMI GCAATG 3 cut(s) 139, 445, 561
BseMII CTCAG 5 cut(s) 245, 309, 360, 627, 1040
BseNI ACTGG 3 cut(s) 75, 718, 753
BseRI GAGGAG 1 cut(s) 784
BseSI GKGCMC 2 cut(s) 466, 998
BseXI GCAGC 2 cut(s) 709, 790
Bsh1236I CGCG 2 cut(s) 157, 216
BshFI GGCC 2 cut(s) 378, 1308
BshNI GGYRCC 2 cut(s) 461, 851
BshVI ATCGAT 1 cut(s) 1119
BsiHKAI GWGCWC 2 cut(s) 998, 1135
BsiSI CCGG 2 cut(s) 539, 597
BslFI GGGAC 1 cut(s) 917
BslI CCNNNNNNNGG 1 cut(s) 1259
BsmAI GTCTC 2 cut(s) 27, 157
BsmBI CGTCTC 1 cut(s) 27
BsmFI GGGAC 1 cut(s) 917
BsmI GAATGC 1 cut(s) 1108
BsnI GGCC 2 cut(s) 378, 1308
Bsp1286I GDGCHC 3 cut(s) 466, 998, 1135
Bsp143I GATC 3 cut(s) 679, 773, 830
Bsp1720I GCTNAGC 2 cut(s) 318, 369
BspACI CCGC 4 cut(s) 566, 677, 896, 985
BspANI GGCC 2 cut(s) 378, 1308
BspCNI CTCAG 5 cut(s) 244, 310, 361, 628, 1039
BspDI ATCGAT 1 cut(s) 1119
BspFNI CGCG 2 cut(s) 157, 216
BspLI GGNNCC 3 cut(s) 463, 502, 853
BspMAI CTGCAG 1 cut(s) 1057
BspMI ACCTGC 1 cut(s) 1007
BspPI GGATC 2 cut(s) 687, 781
BspT107I GGYRCC 2 cut(s) 461, 851
BsrDI GCAATG 3 cut(s) 139, 445, 561
BsrI ACTGG 3 cut(s) 75, 718, 753
BssECI CCNNGG 1 cut(s) 1190
BssMI GATC 3 cut(s) 679, 773, 830
BssSI CACGAG 1 cut(s) 24
Bst2BI CACGAG 1 cut(s) 24
Bst2UI CCWGG 3 cut(s) 849, 1191, 1254
Bst4CI ACNGT 3 cut(s) 343, 514, 928
Bst6I CTCTTC 1 cut(s) 933
BstAPI GCANNNNNTGC 1 cut(s) 993
BstC8I GCNNGC 4 cut(s) 35, 324, 577, 1045
BstDEI CTNAG 5 cut(s) 231, 318, 369, 636, 1026
BstF5I GGATG 2 cut(s) 1200, 1213
BstFNI CGCG 2 cut(s) 157, 216
BstHHI GCGC 2 cut(s) 159, 216
BstKTI GATC 3 cut(s) 682, 776, 833
BstMAI GTCTC 2 cut(s) 27, 157
BstMBI GATC 3 cut(s) 679, 773, 830
BstMWI GCNNNNNNNGC 5 cut(s) 323, 435, 572, 674, 993
BstNI CCWGG 3 cut(s) 849, 1191, 1254
BstNSI RCATGY 5 cut(s) 37, 248, 326, 332, 1047
BstPAI GACNNNNGTC 1 cut(s) 929
BstSCI CCNGG 5 cut(s) 537, 596, 847, 1189, 1252
BstSFI CTRYAG 2 cut(s) 279, 1053
BstSLI GKGCMC 2 cut(s) 466, 998
BstUI CGCG 2 cut(s) 157, 216
BstV1I GCAGC 2 cut(s) 709, 790
BstX2I RGATCY 1 cut(s) 679
BstYI RGATCY 1 cut(s) 679
Bsu15I ATCGAT 1 cut(s) 1119
BsuRI GGCC 2 cut(s) 378, 1308
BsuTUI ATCGAT 1 cut(s) 1119
BtsCI GGATG 2 cut(s) 1200, 1213
BtsI GCAGTG 1 cut(s) 166
BtsIMutI CAGTG 1 cut(s) 166
BveI ACCTGC 1 cut(s) 1007
Cac8I GCNNGC 4 cut(s) 35, 324, 577, 1045
CaiI CAGNNNCTG 1 cut(s) 518
CfoI GCGC 2 cut(s) 159, 216
Cfr13I GGNCC 2 cut(s) 72, 1268
ClaI ATCGAT 1 cut(s) 1119
Csp6I GTAC 3 cut(s) 238, 361, 1181
CviAII CATG 9 cut(s) 34, 211, 245, 323, 329, 382, 729, 1044, 1203
CviQI GTAC 3 cut(s) 238, 361, 1181
DdeI CTNAG 5 cut(s) 231, 318, 369, 636, 1026
DpnI GATC 3 cut(s) 681, 775, 832
DpnII GATC 3 cut(s) 679, 773, 830
DraIII CACNNNGTG 1 cut(s) 1243
EaeI YGGCCR 1 cut(s) 1306
Eam1104I CTCTTC 1 cut(s) 933
EarI CTCTTC 1 cut(s) 933
EciI GGCGGA 1 cut(s) 692
Eco47I GGWCC 2 cut(s) 72, 1268
Eco57I CTGAAG 3 cut(s) 957, 1293, 1317
EcoRII CCWGG 3 cut(s) 847, 1189, 1252
Esp3I CGTCTC 1 cut(s) 27
FaeI CATG 9 cut(s) 37, 214, 248, 326, 332, 385, 732, 1047, 1206
FaqI GGGAC 1 cut(s) 917
FatI CATG 9 cut(s) 33, 210, 244, 322, 328, 381, 728, 1043, 1202
FauI CCCGC 2 cut(s) 559, 889
FauNDI CATATG 1 cut(s) 799
FblI GTMKAC 1 cut(s) 618
Fnu4HI GCNGC 2 cut(s) 723, 804
FokI GGATG 2 cut(s) 1207, 1220
Fsp4HI GCNGC 2 cut(s) 723, 804
FspBI CTAG 1 cut(s) 555
GlaI GCGC 2 cut(s) 158, 215
GluI GCNGC 2 cut(s) 723, 804
HaeIII GGCC 2 cut(s) 378, 1308
HapII CCGG 2 cut(s) 539, 597
HhaI GCGC 2 cut(s) 159, 216
Hin1II CATG 9 cut(s) 37, 214, 248, 326, 332, 385, 732, 1047, 1206
Hin6I GCGC 2 cut(s) 157, 214
HinP1I GCGC 2 cut(s) 157, 214
HincII GTYRAC 1 cut(s) 1087
HindII GTYRAC 1 cut(s) 1087
HindIII AAGCTT 1 cut(s) 1329
HinfI GANTC 4 cut(s) 411, 551, 791, 909
HpaII CCGG 2 cut(s) 539, 597
HphI GGTGA 1 cut(s) 1289
Hpy166II GTNNAC 4 cut(s) 619, 903, 996, 1087
Hpy188I TCNGA 7 cut(s) 88, 234, 457, 817, 914, 1130, 1292
Hpy188III TCNNGA 6 cut(s) 70, 200, 587, 653, 1226, 1271
Hpy8I GTNNAC 4 cut(s) 619, 903, 996, 1087
HpyCH4III ACNGT 3 cut(s) 343, 514, 928
HpyCH4IV ACGT 1 cut(s) 507
HpyF10VI GCNNNNNNNGC 5 cut(s) 323, 435, 572, 674, 993
HpyF3I CTNAG 5 cut(s) 231, 318, 369, 636, 1026
HpySE526I ACGT 1 cut(s) 507
Hsp92II CATG 9 cut(s) 37, 214, 248, 326, 332, 385, 732, 1047, 1206
HspAI GCGC 2 cut(s) 157, 214
Kzo9I GATC 3 cut(s) 679, 773, 830
LmnI GCTCC 2 cut(s) 365, 1171
Lsp1109I GCAGC 2 cut(s) 709, 790
LweI GCATC 3 cut(s) 734, 742, 1022
MaeI CTAG 1 cut(s) 555
MaeII ACGT 1 cut(s) 507
MaeIII GTNAC 6 cut(s) 130, 350, 470, 508, 1243, 1357
MalI GATC 3 cut(s) 681, 775, 832
MboI GATC 3 cut(s) 679, 773, 830
MboII GAAGA 2 cut(s) 870, 950
MfeI CAATTG 3 cut(s) 399, 625, 867
MflI RGATCY 1 cut(s) 679
MhlI GDGCHC 3 cut(s) 466, 998, 1135
MlsI TGGCCA 1 cut(s) 1308
MluNI TGGCCA 1 cut(s) 1308
MlyI GAGTC 2 cut(s) 785, 918
MmeI TCCRAC 4 cut(s) 528, 734, 902, 937
MnlI CCTC 7 cut(s) 350, 436, 583, 632, 805, 853, 1148
Mox20I TGGCCA 1 cut(s) 1308
MscI TGGCCA 1 cut(s) 1308
MslI CAYNNNNRTG 1 cut(s) 327
Msp20I TGGCCA 1 cut(s) 1308
MspI CCGG 2 cut(s) 539, 597
MspR9I CCNGG 5 cut(s) 539, 598, 849, 1191, 1254
MunI CAATTG 3 cut(s) 399, 625, 867
Mva1269I GAATGC 1 cut(s) 1108
MvaI CCWGG 3 cut(s) 849, 1191, 1254
MvnI CGCG 2 cut(s) 157, 216
MwoI GCNNNNNNNGC 5 cut(s) 323, 435, 572, 674, 993
NciI CCSGG 2 cut(s) 539, 598
NdeI CATATG 1 cut(s) 799
NdeII GATC 3 cut(s) 679, 773, 830
NlaIII CATG 9 cut(s) 37, 214, 248, 326, 332, 385, 732, 1047, 1206
NlaIV GGNNCC 3 cut(s) 463, 502, 853
NmuCI GTSAC 4 cut(s) 130, 470, 508, 1243
NspI RCATGY 5 cut(s) 37, 248, 326, 332, 1047
PaeI GCATGC 3 cut(s) 37, 326, 1047
PaqCI CACCTGC 1 cut(s) 1007
PcsI WCGNNNNNNNCGW 1 cut(s) 504
PctI GAATGC 1 cut(s) 1108
PfeI GAWTC 2 cut(s) 411, 551
PkrI GCNGC 2 cut(s) 724, 805
PleI GAGTC 2 cut(s) 785, 917
PpsI GAGTC 2 cut(s) 785, 917
PshAI GACNNNNGTC 1 cut(s) 929
PsiI TTATAA 1 cut(s) 981
Psp6I CCWGG 3 cut(s) 847, 1189, 1252
PspGI CCWGG 3 cut(s) 847, 1189, 1252
PspN4I GGNNCC 3 cut(s) 463, 502, 853
PspPI GGNCC 2 cut(s) 72, 1268
PsrI GAACNNNNNNTAC 2 cut(s) 602, 634
PstI CTGCAG 1 cut(s) 1057
PstNI CAGNNNCTG 1 cut(s) 518
PsuI RGATCY 1 cut(s) 679
RsaI GTAC 3 cut(s) 239, 362, 1182
RsaNI GTAC 3 cut(s) 238, 361, 1181
RseI CAYNNNNRTG 1 cut(s) 327
SatI GCNGC 2 cut(s) 723, 804
Sau3AI GATC 3 cut(s) 679, 773, 830
Sau96I GGNCC 2 cut(s) 72, 1268
SchI GAGTC 2 cut(s) 785, 918
ScrFI CCNGG 5 cut(s) 539, 598, 849, 1191, 1254
SduI GDGCHC 3 cut(s) 466, 998, 1135
SfaNI GCATC 3 cut(s) 734, 742, 1022
SfcI CTRYAG 2 cut(s) 279, 1053
SinI GGWCC 2 cut(s) 72, 1268
SmiMI CAYNNNNRTG 1 cut(s) 327
SphI GCATGC 3 cut(s) 37, 326, 1047
SsiI CCGC 4 cut(s) 566, 677, 896, 985
SspI AATATT 2 cut(s) 191, 1369
SspMI CTAG 1 cut(s) 555
StyD4I CCNGG 5 cut(s) 537, 596, 847, 1189, 1252
TaaI ACNGT 3 cut(s) 343, 514, 928
TaiI ACGT 1 cut(s) 510
TaqI TCGA 2 cut(s) 571, 1119
TfiI GAWTC 2 cut(s) 411, 551
TscAI CASTG 1 cut(s) 166
TseFI GTSAC 4 cut(s) 130, 470, 508, 1243
TseI GCWGC 2 cut(s) 722, 803
Tsp45I GTSAC 4 cut(s) 130, 470, 508, 1243
TspDTI ATGAA 4 cut(s) 17, 39, 199, 1191
TspGWI ACGGA 1 cut(s) 378
TspRI CASTG 1 cut(s) 166
VneI GTGCAC 1 cut(s) 994
VpaK11BI GGWCC 2 cut(s) 72, 1268
XapI RAATTY 4 cut(s) 843, 890, 1221, 1348
XceI RCATGY 5 cut(s) 37, 248, 326, 332, 1047
XcmI CCANNNNNNNNNTGG 1 cut(s) 66
XmiI GTMKAC 1 cut(s) 618
XspI CTAG 1 cut(s) 555
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.