Prupe.1G558600_v2.0.a1

Aminotransferase class I and II

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
45587648 .. 45592055
4408 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G558600.1

Sequence Viewer

Length: 1320 bp
ATGTACAAGTTTCCTGCTAGTACATTAGTGTCCCATGCAATCATATTGCAGCCTGTTATTGTTCAGGCCAGTTTCAAGACCCAAAAGGACCTACTTGGTTGTCGTACAAAGGTACCTCGCAATGTAAACATGGAGAAATTGCGGAATGGCTATTTGTTTCCTGAGATTTCAAGGCTTGAGGTTCAACACATTGAGAAGTACCCAAATGCAAAGTTGATAAGCCTTGGGATTGGTGATACAACAGAACCAGTACCACAAATCATCACAACAAGCATGGCTAATTATGCACATGCCCTTTCAACTGTGGACGGTTATACAGGATATGGCCCTGAGCAAGGCAACAAGGCATTGCGGAAGGCAATTGCAAAGGAATTCTATAAAGATCTGCCCATAAAAGACACAGAAGTTTTTGTATCAGATGGCGCACAGTGTGACATTACTCGGCTTCAGCTACTGCTGGGTTCCAACGTGACGATTGCTGTGCAGGATCCATCCTTTCCGGCTTACATAGACTCAAGTGTGATAATAGGTCAGGCTGGTGTTGAAGATGAAGCTGGAAGGTATGGGAGCATTGAATACATGAAATGTGGGCCCCACAATAACTTCTTTCCTGACTTGGCAACCACTTCAAGAGCAGACATTATCTTTTTTTGCTCTCCAAACAACCCCACCGGTCATGCAGCAACAAGGAAGCAATTAGAACAACTTGTAAATTTTGCAAGGGAGAATGGATCAATTATTATTTTTGACTCTGCTTATTCATCTTATATAAAAGATGATAGCCCTCGATCCATTTATGAAATTCCTGGTGCTAGAGAGGTTGCCATTGAAATTTCATCATTCTCAAAATTTGCTGGGTTCACCGGTGTCCGGCTTGGTTGGACAGTTGTTCCTGAGGAGGTCTTGTACTCAAATGGGTTCCCTGTTATACATGACTTCAATCGCATTGTGTGCACTTGCTTCAATGGGGCGTCCAATATTGCTCAAGCTGGTGGACTGGCATGTCTTTCCTCAGAGGGTTTCCTGGCTGTGCGTTCTCTGGTTGACTACTACATGAAGAATGCGAAGATATTGGTTGAAACATTTGCTTCTGTGGGTCTAAAAGTATATGGCGGCACAAACGCTCCCTATATTTGGGTGCATTTTCCAGGCTCAAATTCTTGGGATGTATGCACCAAAGTTCTTGAGAAAGCACACATAATTACAATTCCAGGCTCTGGTTTTGGTCCATCTGGTGAAGAGTTCCTGAGAATTAGTGCTTTTGGCCACAGAGAGTCTATTCTAGAGGCCTCATCTAGGCTTAAATCCCTATTTCAATAG

Protein Analysis

440

Amino Acids

48.14

Weight (kDa)

6.33

Isoelectric Point (pI)

44.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1002
Acc65I GGTACC 1 cut(s) 112
AccB1I GGYRCC 1 cut(s) 112
AccB7I CCANNNNNTGG 1 cut(s) 1217
AciI CCGC 3 cut(s) 142, 352, 1113
AclWI GGATC 4 cut(s) 482, 495, 739, 783
AcoI YGGCCR 1 cut(s) 1264
AcsI RAATTY 6 cut(s) 371, 712, 801, 831, 848, 1156
AcuI CTGAAG 1 cut(s) 431
AcyI GRCGYC 1 cut(s) 971
AdeI CACNNNGTG 1 cut(s) 431
AfaI GTAC 7 cut(s) 5, 22, 106, 114, 200, 252, 908
AfiI CCNNNNNNNGG 5 cut(s) 335, 870, 1134, 1217, 1296
AgeI ACCGGT 2 cut(s) 671, 863
AjnI CCWGG 4 cut(s) 805, 1023, 1147, 1210
AluBI AGCT 3 cut(s) 451, 554, 989
AluI AGCT 3 cut(s) 451, 554, 989
Alw21I GWGCWC 1 cut(s) 956
Alw44I GTGCAC 1 cut(s) 952
AlwI GGATC 4 cut(s) 482, 495, 739, 783
AlwNI CAGNNNCTG 2 cut(s) 454, 1217
AoxI GGCC 5 cut(s) 66, 325, 590, 1264, 1287
ApaI GGGCCC 1 cut(s) 594
ApaLI GTGCAC 1 cut(s) 952
ApeKI GCWGC 2 cut(s) 49, 680
ApoI RAATTY 6 cut(s) 371, 712, 801, 831, 848, 1156
AsiGI ACCGGT 2 cut(s) 671, 863
Asp718I GGTACC 1 cut(s) 112
AspLEI GCGC 1 cut(s) 425
AspS9I GGNCC 5 cut(s) 88, 326, 590, 591, 1226
AsuHPI GGTGA 3 cut(s) 245, 853, 1247
AvaII GGWCC 2 cut(s) 88, 1226
AxyI CCTNAGG 1 cut(s) 894
BaeGI GKGCMC 2 cut(s) 594, 956
BaeI ACNNNNGTAYC 2 cut(s) 96, 129
BalI TGGCCA 1 cut(s) 1266
BamHI GGATCC 1 cut(s) 487
BanI GGYRCC 1 cut(s) 112
BanII GRGCYC 1 cut(s) 594
Bbv12I GWGCWC 1 cut(s) 956
BbvI GCAGC 2 cut(s) 61, 692
BccI CCATC 3 cut(s) 413, 499, 1237
BcgI CGANNNNNNTGC 2 cut(s) 463, 497
BciT130I CCWGG 4 cut(s) 807, 1025, 1149, 1212
BfaI CTAG 4 cut(s) 18, 813, 1283, 1296
BglII AGATCT 1 cut(s) 382
BisI GCNGC 3 cut(s) 50, 681, 1114
BlsI GCNGC 3 cut(s) 51, 682, 1115
Bme1390I CCNGG 4 cut(s) 807, 1025, 1149, 1212
Bme18I GGWCC 2 cut(s) 88, 1226
BmgT120I GGNCC 5 cut(s) 88, 326, 590, 591, 1226
BmiI GGNNCC 6 cut(s) 114, 463, 489, 592, 593, 920
BmrFI CCNGG 4 cut(s) 807, 1025, 1149, 1212
Bpu10I CCTNAGC 1 cut(s) 330
BpuEI CTTGAG 4 cut(s) 197, 499, 969, 1205
BsaHI GRCGYC 1 cut(s) 971
BsaJI CCNNGG 1 cut(s) 223
BsaWI WCCGGW 2 cut(s) 671, 863
BsaXI ACNNNNNCTCC 4 cut(s) 890, 920, 1108, 1138
Bsc4I CCNNNNNNNGG 5 cut(s) 335, 870, 1134, 1217, 1296
Bse118I RCCGGY 2 cut(s) 671, 863
Bse1I ACTGG 3 cut(s) 69, 248, 1002
Bse21I CCTNAGG 1 cut(s) 894
Bse3DI GCAATG 2 cut(s) 127, 347
BseBI CCWGG 4 cut(s) 807, 1025, 1149, 1212
BseDI CCNNGG 1 cut(s) 223
BseGI GGATG 2 cut(s) 491, 1171
BseLI CCNNNNNNNGG 5 cut(s) 335, 870, 1134, 1217, 1296
BseMI GCAATG 2 cut(s) 127, 347
BseMII CTCAG 5 cut(s) 153, 321, 885, 1026, 1238
BseNI ACTGG 3 cut(s) 69, 248, 1002
BseRI GAGGAG 1 cut(s) 911
BseSI GKGCMC 2 cut(s) 594, 956
BseXI GCAGC 2 cut(s) 61, 692
BseYI CCCAGC 2 cut(s) 457, 854
BsgI GTGCAG 1 cut(s) 503
BshFI GGCC 5 cut(s) 68, 327, 592, 1266, 1289
BshNI GGYRCC 1 cut(s) 112
BshTI ACCGGT 2 cut(s) 671, 863
BsiHKAI GWGCWC 1 cut(s) 956
BsiSI CCGG 4 cut(s) 500, 672, 864, 871
BslFI GGGAC 1 cut(s) 16
BslI CCNNNNNNNGG 5 cut(s) 335, 870, 1134, 1217, 1296
BsmFI GGGAC 1 cut(s) 16
BsmI GAATGC 1 cut(s) 1066
BsnI GGCC 5 cut(s) 68, 327, 592, 1266, 1289
Bsp120I GGGCCC 1 cut(s) 590
Bsp1286I GDGCHC 2 cut(s) 594, 956
Bsp1407I TGTACA 1 cut(s) 3
Bsp143I GATC 4 cut(s) 382, 487, 731, 788
BspACI CCGC 3 cut(s) 142, 352, 1113
BspANI GGCC 5 cut(s) 68, 327, 592, 1266, 1289
BspCNI CTCAG 5 cut(s) 154, 322, 886, 1025, 1239
BspLI GGNNCC 6 cut(s) 114, 463, 489, 592, 593, 920
BspPI GGATC 4 cut(s) 482, 495, 739, 783
BspT107I GGYRCC 1 cut(s) 112
BsrDI GCAATG 2 cut(s) 127, 347
BsrFI RCCGGY 2 cut(s) 671, 863
BsrGI TGTACA 1 cut(s) 3
BsrI ACTGG 3 cut(s) 69, 248, 1002
BssAI RCCGGY 2 cut(s) 671, 863
BssECI CCNNGG 1 cut(s) 223
BssMI GATC 4 cut(s) 382, 487, 731, 788
BssNI GRCGYC 1 cut(s) 971
BssT1I CCWWGG 1 cut(s) 223
Bst2UI CCWGG 4 cut(s) 807, 1025, 1149, 1212
Bst4CI ACNGT 4 cut(s) 304, 311, 429, 886
Bst6I CTCTTC 1 cut(s) 1233
BstACI GRCGYC 1 cut(s) 971
BstAPI GCANNNNNTGC 1 cut(s) 951
BstAUI TGTACA 1 cut(s) 3
BstDEI CTNAG 5 cut(s) 162, 330, 894, 1012, 1247
BstENI CCTNNNNNAGG 2 cut(s) 333, 1294
BstF5I GGATG 2 cut(s) 491, 1171
BstHHI GCGC 1 cut(s) 425
BstKTI GATC 4 cut(s) 385, 490, 734, 791
BstMBI GATC 4 cut(s) 382, 487, 731, 788
BstMWI GCNNNNNNNGC 2 cut(s) 284, 951
BstNI CCWGG 4 cut(s) 807, 1025, 1149, 1212
BstNSI RCATGY 2 cut(s) 293, 1005
BstSCI CCNGG 4 cut(s) 805, 1023, 1147, 1210
BstSLI GKGCMC 2 cut(s) 594, 956
BstV1I GCAGC 2 cut(s) 61, 692
BstX2I RGATCY 2 cut(s) 382, 487
BstYI RGATCY 2 cut(s) 382, 487
Bsu36I CCTNAGG 1 cut(s) 894
BsuRI GGCC 5 cut(s) 68, 327, 592, 1266, 1289
BtsCI GGATG 2 cut(s) 491, 1171
BtsIMutI CAGTG 1 cut(s) 434
CaiI CAGNNNCTG 2 cut(s) 454, 1217
CfoI GCGC 1 cut(s) 425
Cfr10I RCCGGY 2 cut(s) 671, 863
Cfr13I GGNCC 5 cut(s) 88, 326, 590, 591, 1226
CseI GACGC 1 cut(s) 960
Csp6I GTAC 7 cut(s) 4, 21, 105, 113, 199, 251, 907
CspAI ACCGGT 2 cut(s) 671, 863
CviAII CATG 9 cut(s) 35, 130, 274, 290, 580, 677, 932, 1002, 1054
CviQI GTAC 7 cut(s) 4, 21, 105, 113, 199, 251, 907
DdeI CTNAG 5 cut(s) 162, 330, 894, 1012, 1247
DpnI GATC 4 cut(s) 384, 489, 733, 790
DpnII GATC 4 cut(s) 382, 487, 731, 788
DraIII CACNNNGTG 1 cut(s) 431
DrdI GACNNNNNNGTC 1 cut(s) 1002
DseDI GACNNNNNNGTC 1 cut(s) 1002
EaeI YGGCCR 1 cut(s) 1264
Eam1104I CTCTTC 1 cut(s) 1233
EarI CTCTTC 1 cut(s) 1233
Eco130I CCWWGG 1 cut(s) 223
Eco147I AGGCCT 1 cut(s) 1289
Eco24I GRGCYC 1 cut(s) 594
Eco47I GGWCC 2 cut(s) 88, 1226
Eco57I CTGAAG 1 cut(s) 431
Eco81I CCTNAGG 1 cut(s) 894
EcoNI CCTNNNNNAGG 2 cut(s) 333, 1294
EcoO109I RGGNCCY 2 cut(s) 88, 591
EcoRI GAATTC 1 cut(s) 371
EcoRII CCWGG 4 cut(s) 805, 1023, 1147, 1210
EcoT14I CCWWGG 1 cut(s) 223
EcoT38I GRGCYC 1 cut(s) 594
ErhI CCWWGG 1 cut(s) 223
FaeI CATG 9 cut(s) 38, 133, 277, 293, 583, 680, 935, 1005, 1057
FaqI GGGAC 1 cut(s) 16
FatI CATG 9 cut(s) 34, 129, 273, 289, 579, 676, 931, 1001, 1053
Fnu4HI GCNGC 3 cut(s) 50, 681, 1114
FokI GGATG 2 cut(s) 478, 1178
FriOI GRGCYC 1 cut(s) 594
Fsp4HI GCNGC 3 cut(s) 50, 681, 1114
FspBI CTAG 4 cut(s) 18, 813, 1283, 1296
GlaI GCGC 1 cut(s) 424
GluI GCNGC 3 cut(s) 50, 681, 1114
GsaI CCCAGC 2 cut(s) 461, 858
HaeIII GGCC 5 cut(s) 68, 327, 592, 1266, 1289
HapII CCGG 4 cut(s) 500, 672, 864, 871
HgaI GACGC 1 cut(s) 960
HhaI GCGC 1 cut(s) 425
Hin1I GRCGYC 1 cut(s) 971
Hin1II CATG 9 cut(s) 38, 133, 277, 293, 583, 680, 935, 1005, 1057
Hin6I GCGC 1 cut(s) 423
HinP1I GCGC 1 cut(s) 423
HincII GTYRAC 1 cut(s) 1045
HindII GTYRAC 1 cut(s) 1045
HinfI GANTC 3 cut(s) 512, 749, 1274
HpaII CCGG 4 cut(s) 500, 672, 864, 871
HphI GGTGA 3 cut(s) 245, 853, 1247
Hpy166II GTNNAC 6 cut(s) 127, 307, 861, 954, 995, 1045
Hpy188I TCNGA 2 cut(s) 418, 1015
Hpy188III TCNNGA 8 cut(s) 76, 161, 611, 630, 893, 1184, 1246, 1283
Hpy8I GTNNAC 6 cut(s) 127, 307, 861, 954, 995, 1045
HpyAV CCTTC 2 cut(s) 349, 552
HpyCH4III ACNGT 4 cut(s) 304, 311, 429, 886
HpyCH4IV ACGT 1 cut(s) 468
HpyF10VI GCNNNNNNNGC 2 cut(s) 284, 951
HpyF3I CTNAG 5 cut(s) 162, 330, 894, 1012, 1247
HpySE526I ACGT 1 cut(s) 468
Hsp92I GRCGYC 1 cut(s) 971
Hsp92II CATG 9 cut(s) 38, 133, 277, 293, 583, 680, 935, 1005, 1057
HspAI GCGC 1 cut(s) 423
KpnI GGTACC 1 cut(s) 116
Kzo9I GATC 4 cut(s) 382, 487, 731, 788
LmnI GCTCC 2 cut(s) 567, 1129
Lsp1109I GCAGC 2 cut(s) 61, 692
MaeI CTAG 4 cut(s) 18, 813, 1283, 1296
MaeII ACGT 1 cut(s) 468
MaeIII GTNAC 2 cut(s) 431, 469
MalI GATC 4 cut(s) 384, 489, 733, 790
MboI GATC 4 cut(s) 382, 487, 731, 788
MboII GAAGA 4 cut(s) 557, 1069, 1078, 1250
MfeI CAATTG 1 cut(s) 360
MflI RGATCY 2 cut(s) 382, 487
MhlI GDGCHC 2 cut(s) 594, 956
MlsI TGGCCA 1 cut(s) 1266
MluNI TGGCCA 1 cut(s) 1266
MlyI GAGTC 3 cut(s) 506, 743, 1283
MmeI TCCRAC 2 cut(s) 489, 860
Mox20I TGGCCA 1 cut(s) 1266
MscI TGGCCA 1 cut(s) 1266
MseI TTAA 1 cut(s) 1302
Msp20I TGGCCA 1 cut(s) 1266
MspI CCGG 4 cut(s) 500, 672, 864, 871
MspR9I CCNGG 4 cut(s) 807, 1025, 1149, 1212
MunI CAATTG 1 cut(s) 360
Mva1269I GAATGC 1 cut(s) 1066
MvaI CCWGG 4 cut(s) 807, 1025, 1149, 1212
MwoI GCNNNNNNNGC 2 cut(s) 284, 951
NdeII GATC 4 cut(s) 382, 487, 731, 788
NlaIII CATG 9 cut(s) 38, 133, 277, 293, 583, 680, 935, 1005, 1057
NlaIV GGNNCC 6 cut(s) 114, 463, 489, 592, 593, 920
NmeAIII GCCGAG 1 cut(s) 421
NmuCI GTSAC 2 cut(s) 431, 469
NspI RCATGY 2 cut(s) 293, 1005
PceI AGGCCT 1 cut(s) 1289
PctI GAATGC 1 cut(s) 1066
PflMI CCANNNNNTGG 1 cut(s) 1217
PinAI ACCGGT 2 cut(s) 671, 863
PkrI GCNGC 3 cut(s) 51, 682, 1115
PleI GAGTC 3 cut(s) 506, 743, 1282
PpsI GAGTC 3 cut(s) 506, 743, 1282
PpuMI RGGWCCY 1 cut(s) 88
Psp5II RGGWCCY 1 cut(s) 88
Psp6I CCWGG 4 cut(s) 805, 1023, 1147, 1210
PspFI CCCAGC 2 cut(s) 457, 854
PspGI CCWGG 4 cut(s) 805, 1023, 1147, 1210
PspN4I GGNNCC 6 cut(s) 114, 463, 489, 592, 593, 920
PspOMI GGGCCC 1 cut(s) 590
PspPI GGNCC 5 cut(s) 88, 326, 590, 591, 1226
PspPPI RGGWCCY 1 cut(s) 88
PstNI CAGNNNCTG 2 cut(s) 454, 1217
PsuI RGATCY 2 cut(s) 382, 487
RsaI GTAC 7 cut(s) 5, 22, 106, 114, 200, 252, 908
RsaNI GTAC 7 cut(s) 4, 21, 105, 113, 199, 251, 907
SaqAI TTAA 1 cut(s) 1302
SatI GCNGC 3 cut(s) 50, 681, 1114
Sau3AI GATC 4 cut(s) 382, 487, 731, 788
Sau96I GGNCC 5 cut(s) 88, 326, 590, 591, 1226
SchI GAGTC 3 cut(s) 506, 743, 1283
ScrFI CCNGG 4 cut(s) 807, 1025, 1149, 1212
SduI GDGCHC 2 cut(s) 594, 956
SgrAI CRCCGGYG 1 cut(s) 863
SinI GGWCC 2 cut(s) 88, 1226
SmlI CTYRAG 4 cut(s) 176, 514, 984, 1184
SmoI CTYRAG 4 cut(s) 176, 514, 984, 1184
SseBI AGGCCT 1 cut(s) 1289
SsiI CCGC 3 cut(s) 142, 352, 1113
SspI AATATT 1 cut(s) 979
SspMI CTAG 4 cut(s) 18, 813, 1283, 1296
StuI AGGCCT 1 cut(s) 1289
StyD4I CCNGG 4 cut(s) 805, 1023, 1147, 1210
StyI CCWWGG 1 cut(s) 223
TaaI ACNGT 4 cut(s) 304, 311, 429, 886
TaiI ACGT 1 cut(s) 471
TaqI TCGA 1 cut(s) 787
TatI WGTACW 3 cut(s) 3, 20, 906
TauI GCSGC 1 cut(s) 1116
Tru1I TTAA 1 cut(s) 1302
Tru9I TTAA 1 cut(s) 1302
TscAI CASTG 1 cut(s) 434
TseFI GTSAC 2 cut(s) 431, 469
TseI GCWGC 2 cut(s) 49, 680
Tsp45I GTSAC 2 cut(s) 431, 469
TspDTI ATGAA 6 cut(s) 564, 596, 750, 813, 825, 1070
TspRI CASTG 1 cut(s) 434
Van91I CCANNNNNTGG 1 cut(s) 1217
VneI GTGCAC 1 cut(s) 952
VpaK11BI GGWCC 2 cut(s) 88, 1226
XagI CCTNNNNNAGG 2 cut(s) 333, 1294
XapI RAATTY 6 cut(s) 371, 712, 801, 831, 848, 1156
XbaI TCTAGA 1 cut(s) 1282
XceI RCATGY 2 cut(s) 293, 1005
XspI CTAG 4 cut(s) 18, 813, 1283, 1296
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.