Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008976

Physical Location & Seq

Genomic Coordinates Forward (+)

6313883 .. 6316047

Gene Structure 2165 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G14750.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 831 bp

ATGATCGCCGCCGGAGCTAAATCGCTATTAGGGCTTTCGATGGCTTCTCCAAAAGGGATTTTCGATAGCAATTCAATGAGTAATTCAAGATCTGTTGTTGTTGTTCGTGCTTGTGTTTCTATGGATGGATCTCAAACTCTGAGTCATAACAAAAATGGATCTATTCCTGAGGTTAAATCCATTAACGGTCACACGGGACAAAAGCAAGGACCTTTGTCTACGGTCGGAAACTCGACAAATATAAAGTGGCATGAATGTTCTGTTGAGAAAGTTGATAGACAGAGATTGCTTGATCAGAAAGGATGTGTGATTTGGGTCACCGGTCTTAGTGGTTCAGGGAAGAGTACTTTGGCTTGTGCTTTGAATCAGATGTTGTATCAAAAGGGGAAGCTTTGTTATATTCTTGATGGTGATAATGTTAGGCATGGCTTAAACCGTGATCTTAGCTTTAAAGCTGAGGATCGTGCAGAGAATATTCGTAGAGTTGGAGAGGTTGCTAAGCTTTTTGCGGATGCTGGAATAATCTGCATTGCGAGTTTGATATCTCCTTATAGAACAGATAGGGACGCTTGTCGAAGTTTGCTCCCCGAGGGAGATTTTGTTGAGGTGTTCATGGATGTACCGCTTAGTGTTTGCGAGGCGAGGGATCCAAAGGGTCTTTACAAGCTTGCTCGTGCAGGAAAGATCAAAGGTTTTACCGGGATCGATGACCCTTACGAGCCACCATTGAACTGCGAGATTTCTCTAGGACGTGAAGGAGGAACTTCTCCTATCGAAATGGCGGAAAAGGTCGTCGGATACTTAGATAACAAGGGTTATCTTCAAGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000103 GO:0003674 GO:0003824 GO:0004020 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006790 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00230 ko00920 ko01100 ko01120 map00230 map00920 map01100 map01120

Pfam Domains

Protein Families

APS_kinase

Protein Analysis

276

Amino Acids

29.79

Weight (kDa)

8.31

Isoelectric Point (pI)

32.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
APS_kinase	PF01583	100 - 249	7e-70	Adenylylsulphate kinase
AAA_33	PF13671	103 - 215	1e-05	AAA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008976)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G14750
fragaria_vesca	FvH4_2g04460
malus_domestica	MD05G1100600.v1.1 MD10G1105800.v1.1
prunus_persica	Prupe.8G145000_v2.0.a1 Prupe.8G145000_v2.0.a1
pyrus_communis	pycom05g09920 pycom10g09120
rosa_chinensis	RchiOBHm_Chr6g0253831
rosa_laevigata	RLG00000014962
rosa_multiflora	Rmu_co7978700.1_g000001
rosa_roxburghii	Rroxscaffold_7G00211480
rosa_rugosa	Rorug05G0548000 Rorug05G0548100 Rorug07G0194700
rosa_samantha	Rh4AG288600 Rh5AG196500 Rh6AG063600 Rh6BG057100 Rh6CG057100 Rh6DG054300
rosa_wichuraiana	Rw6G005640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	218
AciI	CCGC	4 cut(s)	9, 509, 623, 782
AclWI	GGATC	6 cut(s)	136, 166, 468, 641, 654, 710
AfaI	GTAC	2 cut(s)	346, 621
AgeI	ACCGGT	1 cut(s)	320
AgsI	TTSAA	5 cut(s)	75, 87, 364, 730, 824
AjiI	CACGTC	1 cut(s)	752
AjuI	GAANNNNNNNTTGG	2 cut(s)	332, 364
AluBI	AGCT	6 cut(s)	17, 391, 447, 455, 502, 667
AluI	AGCT	6 cut(s)	17, 391, 447, 455, 502, 667
AlwI	GGATC	6 cut(s)	136, 166, 468, 641, 654, 710
Ama87I	CYCGRG	1 cut(s)	587
ArsI	GACNNNNNNTTYG	2 cut(s)	127, 159
AsiGI	ACCGGT	1 cut(s)	320
AspS9I	GGNCC	1 cut(s)	209
AsuC2I	CCSGG	1 cut(s)	700
AsuHPI	GGTGA	2 cut(s)	310, 422
AvaI	CYCGRG	1 cut(s)	587
AvaII	GGWCC	1 cut(s)	209
AxyI	CCTNAGG	1 cut(s)	168
BamHI	GGATCC	1 cut(s)	646
BauI	CACGAG	1 cut(s)	672
BbvCI	CCTCAGC	1 cut(s)	456
BccI	CCATC	3 cut(s)	34, 119, 401
BciVI	GTATCC	1 cut(s)	791
BclI	TGATCA	1 cut(s)	292
BcnI	CCSGG	1 cut(s)	700
BfaI	CTAG	1 cut(s)	746
BfuI	GTATCC	1 cut(s)	791
BglII	AGATCT	1 cut(s)	89
BisI	GCNGC	1 cut(s)	9
BlpI	GCTNAGC	1 cut(s)	498
BlsI	GCNGC	1 cut(s)	10
BmcAI	AGTACT	1 cut(s)	346
Bme1390I	CCNGG	1 cut(s)	700
Bme18I	GGWCC	1 cut(s)	209
BmeT110I	CYCGRG	1 cut(s)	587
BmgBI	CACGTC	1 cut(s)	752
BmgT120I	GGNCC	1 cut(s)	209
BmiI	GGNNCC	1 cut(s)	648
BmrFI	CCNGG	1 cut(s)	700
BmsI	GCATC	1 cut(s)	502
BoxI	GACNNNNGTC	2 cut(s)	214, 570
Bpu10I	CCTNAGC	1 cut(s)	456
Bpu1102I	GCTNAGC	1 cut(s)	498
BpuMI	CCSGG	1 cut(s)	700
Bsa29I	ATCGAT	1 cut(s)	705
BsaJI	CCNNGG	1 cut(s)	588
BsaWI	WCCGGW	1 cut(s)	320
BsaXI	ACNNNNNCTCC	2 cut(s)	585, 615
Bse118I	RCCGGY	1 cut(s)	320
Bse21I	CCTNAGG	1 cut(s)	168
Bse3DI	GCAATG	1 cut(s)	528
BseCI	ATCGAT	1 cut(s)	705
BseDI	CCNNGG	1 cut(s)	588
BseGI	GGATG	4 cut(s)	130, 308, 517, 622
BseMI	GCAATG	1 cut(s)	528
BseMII	CTCAG	3 cut(s)	131, 159, 447
BsgI	GTGCAG	2 cut(s)	486, 696
Bsh1285I	CGRYCG	1 cut(s)	225
BshTI	ACCGGT	1 cut(s)	320
BshVI	ATCGAT	1 cut(s)	705
BsiEI	CGRYCG	1 cut(s)	225
BsiHKCI	CYCGRG	1 cut(s)	587
BsiSI	CCGG	3 cut(s)	12, 321, 699
BslFI	GGGAC	2 cut(s)	210, 578
BsmFI	GGGAC	2 cut(s)	210, 578
BsoBI	CYCGRG	1 cut(s)	587
Bsp1720I	GCTNAGC	1 cut(s)	498
BspACI	CCGC	4 cut(s)	9, 509, 623, 782
BspCNI	CTCAG	3 cut(s)	132, 160, 448
BspDI	ATCGAT	1 cut(s)	705
BspLI	GGNNCC	1 cut(s)	648
BspPI	GGATC	6 cut(s)	136, 166, 468, 641, 654, 710
BsrDI	GCAATG	1 cut(s)	528
BsrFI	RCCGGY	1 cut(s)	320
BssAI	RCCGGY	1 cut(s)	320
BssECI	CCNNGG	1 cut(s)	588
BssSI	CACGAG	1 cut(s)	672
Bst2BI	CACGAG	1 cut(s)	672
Bst4CI	ACNGT	3 cut(s)	188, 223, 437
Bst6I	CTCTTC	1 cut(s)	335
BstC8I	GCNNGC	1 cut(s)	669
BstDEI	CTNAG	8 cut(s)	140, 168, 326, 443, 456, 498, 626, 802
BstEII	GGTNACC	1 cut(s)	316
BstF5I	GGATG	4 cut(s)	130, 308, 517, 622
BstMCI	CGRYCG	1 cut(s)	225
BstMWI	GCNNNNNNNGC	2 cut(s)	14, 31
BstPAI	GACNNNNGTC	2 cut(s)	214, 570
BstPI	GGTNACC	1 cut(s)	316
BstSCI	CCNGG	1 cut(s)	698
BstX2I	RGATCY	4 cut(s)	89, 128, 158, 646
BstYI	RGATCY	4 cut(s)	89, 128, 158, 646
Bsu15I	ATCGAT	1 cut(s)	705
Bsu36I	CCTNAGG	1 cut(s)	168
BsuI	GTATCC	1 cut(s)	791
BsuTUI	ATCGAT	1 cut(s)	705
BtrI	CACGTC	1 cut(s)	752
BtsCI	GGATG	4 cut(s)	130, 308, 517, 622
Cac8I	GCNNGC	1 cut(s)	669
Cfr10I	RCCGGY	1 cut(s)	320
Cfr13I	GGNCC	1 cut(s)	209
ClaI	ATCGAT	1 cut(s)	705
CseI	GACGC	1 cut(s)	575
Csp6I	GTAC	2 cut(s)	345, 620
CspAI	ACCGGT	1 cut(s)	320
CviAII	CATG	3 cut(s)	251, 425, 613
CviQI	GTAC	2 cut(s)	345, 620
DdeI	CTNAG	8 cut(s)	140, 168, 326, 443, 456, 498, 626, 802
DraI	TTTAAA	1 cut(s)	451
Eam1104I	CTCTTC	1 cut(s)	335
EarI	CTCTTC	1 cut(s)	335
EciI	GGCGGA	1 cut(s)	797
Eco32I	GATATC	1 cut(s)	543
Eco47I	GGWCC	1 cut(s)	209
Eco81I	CCTNAGG	1 cut(s)	168
Eco88I	CYCGRG	1 cut(s)	587
Eco91I	GGTNACC	1 cut(s)	316
EcoO109I	RGGNCCY	1 cut(s)	209
EcoO65I	GGTNACC	1 cut(s)	316
EcoRV	GATATC	1 cut(s)	543
FaeI	CATG	3 cut(s)	254, 428, 616
FaiI	YATR	9 cut(s)	122, 147, 242, 252, 399, 426, 552, 614, 829
FaqI	GGGAC	2 cut(s)	210, 578
FatI	CATG	3 cut(s)	250, 424, 612
FbaI	TGATCA	1 cut(s)	292
FblI	GTMKAC	1 cut(s)	218
Fnu4HI	GCNGC	1 cut(s)	9
FokI	GGATG	4 cut(s)	137, 315, 524, 629
Fsp4HI	GCNGC	1 cut(s)	9
FspBI	CTAG	1 cut(s)	746
GluI	GCNGC	1 cut(s)	9
HapII	CCGG	3 cut(s)	12, 321, 699
HgaI	GACGC	1 cut(s)	575
Hin1II	CATG	3 cut(s)	254, 428, 616
HindIII	AAGCTT	3 cut(s)	389, 500, 665
HinfI	GANTC	2 cut(s)	142, 364
HpaII	CCGG	3 cut(s)	12, 321, 699
HphI	GGTGA	2 cut(s)	310, 422
Hpy166II	GTNNAC	1 cut(s)	219
Hpy188I	TCNGA	5 cut(s)	141, 227, 297, 369, 797
Hpy188III	TCNNGA	3 cut(s)	87, 167, 404
Hpy8I	GTNNAC	1 cut(s)	219
Hpy99I	CGWCG	1 cut(s)	797
HpyAV	CCTTC	1 cut(s)	749
HpyCH4III	ACNGT	3 cut(s)	188, 223, 437
HpyCH4IV	ACGT	1 cut(s)	751
HpyCH4V	TGCA	3 cut(s)	467, 528, 677
HpyF10VI	GCNNNNNNNGC	2 cut(s)	14, 31
HpyF3I	CTNAG	8 cut(s)	140, 168, 326, 443, 456, 498, 626, 802
HpySE526I	ACGT	1 cut(s)	751
Hsp92II	CATG	3 cut(s)	254, 428, 616
Ksp22I	TGATCA	1 cut(s)	292
LmnI	GCTCC	2 cut(s)	14, 588
LpnPI	CCDG	7 cut(s)	25, 180, 321, 334, 501, 663, 712
LweI	GCATC	1 cut(s)	502
MaeI	CTAG	1 cut(s)	746
MaeII	ACGT	1 cut(s)	751
MaeIII	GTNAC	2 cut(s)	188, 316
MboII	GAAGA	2 cut(s)	352, 812
MflI	RGATCY	4 cut(s)	89, 128, 158, 646
MluCI	AATT	2 cut(s)	70, 82
MlyI	GAGTC	1 cut(s)	151
MmeI	TCCRAC	3 cut(s)	205, 466, 775
MnlI	CCTC	8 cut(s)	163, 451, 484, 583, 598, 631, 636, 752
MseI	TTAA	4 cut(s)	174, 183, 431, 450
MspI	CCGG	3 cut(s)	12, 321, 699
MspR9I	CCNGG	1 cut(s)	700
MwoI	GCNNNNNNNGC	2 cut(s)	14, 31
NciI	CCSGG	1 cut(s)	700
NlaIII	CATG	3 cut(s)	254, 428, 616
NlaIV	GGNNCC	1 cut(s)	648
NmuCI	GTSAC	2 cut(s)	188, 316
PfeI	GAWTC	1 cut(s)	364
PinAI	ACCGGT	1 cut(s)	320
PkrI	GCNGC	1 cut(s)	10
PleI	GAGTC	1 cut(s)	150
PpsI	GAGTC	1 cut(s)	150
PpuMI	RGGWCCY	1 cut(s)	209
PshAI	GACNNNNGTC	2 cut(s)	214, 570
Psp5II	RGGWCCY	1 cut(s)	209
PspEI	GGTNACC	1 cut(s)	316
PspN4I	GGNNCC	1 cut(s)	648
PspPI	GGNCC	1 cut(s)	209
PspPPI	RGGWCCY	1 cut(s)	209
PsuI	RGATCY	4 cut(s)	89, 128, 158, 646
RsaI	GTAC	2 cut(s)	346, 621
RsaNI	GTAC	2 cut(s)	345, 620
SaqAI	TTAA	4 cut(s)	174, 183, 431, 450
SatI	GCNGC	1 cut(s)	9
Sau96I	GGNCC	1 cut(s)	209
ScaI	AGTACT	1 cut(s)	346
SchI	GAGTC	1 cut(s)	151
ScrFI	CCNGG	1 cut(s)	700
SfaNI	GCATC	1 cut(s)	502
SinI	GGWCC	1 cut(s)	209
Sse9I	AATT	2 cut(s)	70, 82
SsiI	CCGC	4 cut(s)	9, 509, 623, 782
SspI	AATATT	1 cut(s)	475
SspMI	CTAG	1 cut(s)	746
StyD4I	CCNGG	1 cut(s)	698
TaaI	ACNGT	3 cut(s)	188, 223, 437
TaiI	ACGT	1 cut(s)	754
TaqI	TCGA	6 cut(s)	38, 63, 233, 574, 705, 774
TasI	AATT	2 cut(s)	70, 82
TatI	WGTACW	1 cut(s)	344
TauI	GCSGC	1 cut(s)	11
TfiI	GAWTC	1 cut(s)	364
Tru1I	TTAA	4 cut(s)	174, 183, 431, 450
Tru9I	TTAA	4 cut(s)	174, 183, 431, 450
TseFI	GTSAC	2 cut(s)	188, 316
Tsp45I	GTSAC	2 cut(s)	188, 316
TspDTI	ATGAA	2 cut(s)	267, 601
VpaK11BI	GGWCC	1 cut(s)	209
XmiI	GTMKAC	1 cut(s)	218
XspI	CTAG	1 cut(s)	746
ZrmI	AGTACT	1 cut(s)	346

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.