Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0008976

Physical Location & Seq

Genomic Coordinates Forward (+)

16105181 .. 16108631

Gene Structure 3451 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G145000.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 873 bp

ATGATTTTACGAGATATGCAAGCCAACCCACTGCAATGGAAGGCCTCGCCGGGACTCGGTGTCGGGCTTGAAACGACGTCTTCGTCGCCGTTACCGTCGTTTTCGCAGCTGTCGTTGGGGAACTTGTCCGGTGGCACTTCTGTAAATAGCTTGAAAACCAGGGGTTTGTTTCTAGTGAAGGCTATGGAGGGCTCCAGGACGGCGAGCTTGAATGGGCACGCTGGGAATGCAGATAAAAATGCGAGCTTGCTGTCTTCGGTTGGAAATTCAACCAACATTCAGTGGCATGAGTGTTCATTGAACAAAAATGACAGGCAAAAGTTACTTAAACAAAAAGGGTGCGTGATATGGATCACTGGTCTCAGCGGCTCAGGGAAGAGCACTGTGGCTTGTGCTTTGGGTGGGAGTTTGTACCGCAGGGGAAAGCTGTCATACATTCTTGATGGGGACAATGTCAGGCATGGCTTGAACCGTGACCTTAGTTTTAAAGCAGAAGATCGTGCAGAGAACATTCGGAGGATTGGGGAGGTGGCGAAATTGTTTGCAGATGCTGGAGTTATCTGTATTGCTAGCCTGATTTCTCCTTACAGAAGGGATCGCGATGCCTGTCGTGCAATGCTACCTGCTGGAGATTTTATTGAGGTGTTCATGGACGTTCCACTCCAAGTTTGTGAGGCTAGAGACTCGAAGGGCCTATATAAGCTTGCACGTGCAGGCAAGATCAAAGGTTTTACTGGGATTGATGATCCATATGAGCCACCATTAAATTGTGAGATAGTATTAACACATGAAGGAGAAGTGTGTGCTTCCCCATGTGAGATGGCCGAAGAAGTGATTTCTTACTTGGAAGATAAGGGGTTCCTCGAGGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004020 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00230 ko00920 ko01100 ko01120 map00230 map00920 map01100 map01120

Pfam Domains

Protein Families

APS_kinase

Protein Analysis

291

Amino Acids

31.27

Weight (kDa)

7.52

Isoelectric Point (pI)

36.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008976)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G14750
fragaria_vesca	FvH4_2g04460
malus_domestica	MD05G1100600.v1.1 MD10G1105800.v1.1
prunus_persica	Prupe.8G145000_v2.0.a1 Prupe.8G145000_v2.0.a1
pyrus_communis	pycom05g09920 pycom10g09120
rosa_chinensis	RchiOBHm_Chr6g0253831
rosa_laevigata	RLG00000014962
rosa_multiflora	Rmu_co7978700.1_g000001
rosa_roxburghii	Rroxscaffold_7G00211480
rosa_rugosa	Rorug05G0548000 Rorug05G0548100 Rorug07G0194700
rosa_samantha	Rh4AG288600 Rh5AG196500 Rh6AG063600 Rh6BG057100 Rh6CG057100 Rh6DG054300
rosa_wichuraiana	Rw6G005640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	82
AatII	GACGTC	1 cut(s)	80
AbsI	CCTCGAGG	1 cut(s)	863
Acc36I	ACCTGC	1 cut(s)	631
AccII	CGCG	1 cut(s)	600
AciI	CCGC	2 cut(s)	366, 415
AclWI	GGATC	3 cut(s)	359, 603, 740
AcoI	YGGCCR	1 cut(s)	822
AcsI	RAATTY	1 cut(s)	265
AcvI	CACGTG	1 cut(s)	710
AcyI	GRCGYC	1 cut(s)	77
AfaI	GTAC	1 cut(s)	413
AfiI	CCNNNNNNNGG	1 cut(s)	56
AgsI	TTSAA	6 cut(s)	71, 154, 211, 270, 301, 469
AhdI	GACNNNNNGTC	1 cut(s)	59
AjnI	CCWGG	2 cut(s)	158, 194
AluBI	AGCT	6 cut(s)	109, 150, 207, 246, 427, 703
AluI	AGCT	6 cut(s)	109, 150, 207, 246, 427, 703
Alw21I	GWGCWC	1 cut(s)	383
Alw26I	GTCTC	2 cut(s)	365, 675
AlwI	GGATC	3 cut(s)	359, 603, 740
AlwNI	CAGNNNCTG	1 cut(s)	551
Ama87I	CYCGRG	1 cut(s)	863
AoxI	GGCC	3 cut(s)	42, 691, 822
ApeKI	GCWGC	1 cut(s)	106
ApoI	RAATTY	1 cut(s)	265
AspS9I	GGNCC	1 cut(s)	691
AsuC2I	CCSGG	1 cut(s)	51
AsuNHI	GCTAGC	1 cut(s)	569
AvaI	CYCGRG	1 cut(s)	863
BaeGI	GKGCMC	1 cut(s)	219
BanII	GRGCYC	1 cut(s)	194
BbrPI	CACGTG	1 cut(s)	710
BbsI	GAAGAC	2 cut(s)	72, 246
Bbv12I	GWGCWC	1 cut(s)	383
BbvI	GCAGC	1 cut(s)	118
BccI	CCATC	2 cut(s)	437, 814
BceAI	ACGGC	2 cut(s)	73, 216
BciT130I	CCWGG	2 cut(s)	160, 196
BcnI	CCSGG	1 cut(s)	51
BcoDI	GTCTC	2 cut(s)	365, 675
BfaI	CTAG	3 cut(s)	173, 570, 678
BfuAI	ACCTGC	1 cut(s)	631
BisI	GCNGC	2 cut(s)	107, 367
BlsI	GCNGC	2 cut(s)	108, 368
Bme1390I	CCNGG	3 cut(s)	51, 160, 196
BmeRI	GACNNNNNGTC	1 cut(s)	59
BmeT110I	CYCGRG	1 cut(s)	863
BmgT120I	GGNCC	1 cut(s)	691
BmiI	GGNNCC	2 cut(s)	193, 860
BmrFI	CCNGG	3 cut(s)	51, 160, 196
BmrI	ACTGGG	1 cut(s)	744
BmsI	GCATC	2 cut(s)	538, 592
BmtI	GCTAGC	1 cut(s)	573
BmuI	ACTGGG	1 cut(s)	744
BpiI	GAAGAC	2 cut(s)	72, 246
BpmI	CTGGAG	3 cut(s)	178, 573, 648
Bpu10I	CCTNAGC	1 cut(s)	370
BpuMI	CCSGG	1 cut(s)	51
BsaAI	YACGTR	1 cut(s)	710
BsaBI	GATNNNNATC	1 cut(s)	350
BsaHI	GRCGYC	1 cut(s)	77
BsaI	GGTCTC	1 cut(s)	365
BsaJI	CCNNGG	1 cut(s)	159
BsaWI	WCCGGW	1 cut(s)	128
Bsc4I	CCNNNNNNNGG	1 cut(s)	56
Bse1I	ACTGG	2 cut(s)	361, 739
Bse3DI	GCAATG	2 cut(s)	41, 621
Bse8I	GATNNNNATC	1 cut(s)	350
BseBI	CCWGG	2 cut(s)	160, 196
BseDI	CCNNGG	1 cut(s)	159
BseJI	GATNNNNATC	1 cut(s)	350
BseLI	CCNNNNNNNGG	1 cut(s)	56
BseMI	GCAATG	2 cut(s)	41, 621
BseMII	CTCAG	2 cut(s)	376, 384
BseNI	ACTGG	2 cut(s)	361, 739
BseSI	GKGCMC	1 cut(s)	219
BseXI	GCAGC	1 cut(s)	118
BseYI	CCCAGC	1 cut(s)	221
BsgI	GTGCAG	2 cut(s)	522, 732
Bsh1236I	CGCG	1 cut(s)	600
BshFI	GGCC	3 cut(s)	44, 693, 824
BsiHKAI	GWGCWC	1 cut(s)	383
BsiHKCI	CYCGRG	1 cut(s)	863
BsiSI	CCGG	2 cut(s)	50, 129
BslFI	GGGAC	2 cut(s)	66, 461
BslI	CCNNNNNNNGG	1 cut(s)	56
BsmAI	GTCTC	2 cut(s)	365, 675
BsmFI	GGGAC	2 cut(s)	66, 461
BsmI	GAATGC	1 cut(s)	232
BsnI	GGCC	3 cut(s)	44, 693, 824
Bso31I	GGTCTC	1 cut(s)	365
BsoBI	CYCGRG	1 cut(s)	863
Bsp1286I	GDGCHC	3 cut(s)	194, 219, 383
Bsp143I	GATC	5 cut(s)	351, 496, 595, 720, 745
Bsp68I	TCGCGA	1 cut(s)	600
BspACI	CCGC	2 cut(s)	366, 415
BspANI	GGCC	3 cut(s)	44, 693, 824
BspCNI	CTCAG	2 cut(s)	375, 383
BspFNI	CGCG	1 cut(s)	600
BspLI	GGNNCC	2 cut(s)	193, 860
BspMI	ACCTGC	1 cut(s)	631
BspOI	GCTAGC	1 cut(s)	573
BspPI	GGATC	3 cut(s)	359, 603, 740
BspQI	GCTCTTC	1 cut(s)	371
BspTNI	GGTCTC	1 cut(s)	365
BsrDI	GCAATG	2 cut(s)	41, 621
BsrI	ACTGG	2 cut(s)	361, 739
BssECI	CCNNGG	1 cut(s)	159
BssMI	GATC	5 cut(s)	351, 496, 595, 720, 745
BssNI	GRCGYC	1 cut(s)	77
Bst2UI	CCWGG	2 cut(s)	160, 196
Bst4CI	ACNGT	3 cut(s)	96, 385, 473
Bst6I	CTCTTC	1 cut(s)	371
BstACI	GRCGYC	1 cut(s)	77
BstBAI	YACGTR	1 cut(s)	710
BstC8I	GCNNGC	8 cut(s)	21, 205, 219, 244, 248, 571, 705, 715
BstDEI	CTNAG	3 cut(s)	362, 370, 479
BstFNI	CGCG	1 cut(s)	600
BstKTI	GATC	5 cut(s)	354, 499, 598, 723, 748
BstMAI	GTCTC	2 cut(s)	365, 675
BstMBI	GATC	5 cut(s)	351, 496, 595, 720, 745
BstMWI	GCNNNNNNNGC	2 cut(s)	227, 611
BstNI	CCWGG	2 cut(s)	160, 196
BstSCI	CCNGG	3 cut(s)	49, 158, 194
BstSLI	GKGCMC	1 cut(s)	219
BstUI	CGCG	1 cut(s)	600
BstV1I	GCAGC	1 cut(s)	118
BstV2I	GAAGAC	2 cut(s)	72, 246
BstXI	CCANNNNNNTGG	1 cut(s)	36
BsuRI	GGCC	3 cut(s)	44, 693, 824
BtgZI	GCGATG	1 cut(s)	615
BtsI	GCAGTG	1 cut(s)	29
BtsIMutI	CAGTG	4 cut(s)	29, 287, 354, 381
BtuMI	TCGCGA	1 cut(s)	600
BveI	ACCTGC	1 cut(s)	631
Cac8I	GCNNGC	8 cut(s)	21, 205, 219, 244, 248, 571, 705, 715
CaiI	CAGNNNCTG	1 cut(s)	551
Cfr13I	GGNCC	1 cut(s)	691
Csp6I	GTAC	1 cut(s)	412
CviAII	CATG	5 cut(s)	287, 461, 649, 788, 813
CviQI	GTAC	1 cut(s)	412
DdeI	CTNAG	3 cut(s)	362, 370, 479
DpnI	GATC	5 cut(s)	353, 498, 597, 722, 747
DpnII	GATC	5 cut(s)	351, 496, 595, 720, 745
DraI	TTTAAA	1 cut(s)	487
DrdI	GACNNNNNNGTC	1 cut(s)	82
DriI	GACNNNNNGTC	1 cut(s)	59
DseDI	GACNNNNNNGTC	1 cut(s)	82
EaeI	YGGCCR	1 cut(s)	822
Eam1104I	CTCTTC	1 cut(s)	371
Eam1105I	GACNNNNNGTC	1 cut(s)	59
EarI	CTCTTC	1 cut(s)	371
Eco147I	AGGCCT	1 cut(s)	44
Eco24I	GRGCYC	1 cut(s)	194
Eco31I	GGTCTC	1 cut(s)	365
Eco72I	CACGTG	1 cut(s)	710
Eco88I	CYCGRG	1 cut(s)	863
EcoO109I	RGGNCCY	1 cut(s)	691
EcoRII	CCWGG	2 cut(s)	158, 194
EcoT38I	GRGCYC	1 cut(s)	194
FaeI	CATG	5 cut(s)	290, 464, 652, 791, 816
FaqI	GGGAC	2 cut(s)	66, 461
FatI	CATG	5 cut(s)	286, 460, 648, 787, 812
FauNDI	CATATG	1 cut(s)	751
Fnu4HI	GCNGC	2 cut(s)	107, 367
FriOI	GRGCYC	1 cut(s)	194
Fsp4HI	GCNGC	2 cut(s)	107, 367
FspBI	CTAG	3 cut(s)	173, 570, 678
GluI	GCNGC	2 cut(s)	107, 367
GsaI	CCCAGC	1 cut(s)	225
GsuI	CTGGAG	3 cut(s)	178, 573, 648
HaeIII	GGCC	3 cut(s)	44, 693, 824
HapII	CCGG	2 cut(s)	50, 129
Hin1I	GRCGYC	1 cut(s)	77
Hin1II	CATG	5 cut(s)	290, 464, 652, 791, 816
HindIII	AAGCTT	1 cut(s)	701
HinfI	GANTC	2 cut(s)	54, 683
HpaII	CCGG	2 cut(s)	50, 129
Hpy188I	TCNGA	1 cut(s)	516
Hpy188III	TCNNGA	2 cut(s)	440, 599
Hpy99I	CGWCG	3 cut(s)	79, 88, 100
HpyAV	CCTTC	5 cut(s)	34, 172, 585, 682, 785
HpyCH4III	ACNGT	3 cut(s)	96, 385, 473
HpyCH4IV	ACGT	3 cut(s)	77, 654, 709
HpyCH4V	TGCA	8 cut(s)	19, 34, 230, 503, 545, 614, 707, 713
HpyF10VI	GCNNNNNNNGC	2 cut(s)	227, 611
HpyF3I	CTNAG	3 cut(s)	362, 370, 479
HpySE526I	ACGT	3 cut(s)	77, 654, 709
Hsp92I	GRCGYC	1 cut(s)	77
Hsp92II	CATG	5 cut(s)	290, 464, 652, 791, 816
Kzo9I	GATC	5 cut(s)	351, 496, 595, 720, 745
LguI	GCTCTTC	1 cut(s)	371
LmnI	GCTCC	1 cut(s)	197
Lsp1109I	GCAGC	1 cut(s)	118
LweI	GCATC	2 cut(s)	538, 592
MaeI	CTAG	3 cut(s)	173, 570, 678
MaeII	ACGT	3 cut(s)	77, 654, 709
MaeIII	GTNAC	3 cut(s)	90, 321, 473
MalI	GATC	5 cut(s)	353, 498, 597, 722, 747
MboI	GATC	5 cut(s)	351, 496, 595, 720, 745
MboII	GAAGA	6 cut(s)	72, 246, 388, 506, 839, 860
MhlI	GDGCHC	3 cut(s)	194, 219, 383
MluCI	AATT	3 cut(s)	265, 536, 766
MlyI	GAGTC	2 cut(s)	48, 677
MmeI	TCCRAC	1 cut(s)	241
MnlI	CCTC	8 cut(s)	55, 181, 510, 520, 634, 667, 859, 872
MseI	TTAA	4 cut(s)	327, 486, 764, 782
MslI	CAYNNNNRTG	1 cut(s)	34
MspA1I	CMGCKG	2 cut(s)	109, 366
MspI	CCGG	2 cut(s)	50, 129
MspR9I	CCNGG	3 cut(s)	51, 160, 196
Mva1269I	GAATGC	1 cut(s)	232
MvaI	CCWGG	2 cut(s)	160, 196
MvnI	CGCG	1 cut(s)	600
MwoI	GCNNNNNNNGC	2 cut(s)	227, 611
NciI	CCSGG	1 cut(s)	51
NdeI	CATATG	1 cut(s)	751
NdeII	GATC	5 cut(s)	351, 496, 595, 720, 745
NheI	GCTAGC	1 cut(s)	569
NlaIII	CATG	5 cut(s)	290, 464, 652, 791, 816
NlaIV	GGNNCC	2 cut(s)	193, 860
NmuCI	GTSAC	1 cut(s)	473
NruI	TCGCGA	1 cut(s)	600
PaeR7I	CTCGAG	1 cut(s)	863
PceI	AGGCCT	1 cut(s)	44
PciSI	GCTCTTC	1 cut(s)	371
PcsI	WCGNNNNNNNCGW	3 cut(s)	80, 92, 110
PctI	GAATGC	1 cut(s)	232
PflFI	GACNNNGTC	1 cut(s)	452
PfoI	TCCNGGA	1 cut(s)	194
PkrI	GCNGC	2 cut(s)	108, 368
PleI	GAGTC	2 cut(s)	48, 677
PmaCI	CACGTG	1 cut(s)	710
PmlI	CACGTG	1 cut(s)	710
PpsI	GAGTC	2 cut(s)	48, 677
Ppu21I	YACGTR	1 cut(s)	710
Psp6I	CCWGG	2 cut(s)	158, 194
PspCI	CACGTG	1 cut(s)	710
PspFI	CCCAGC	1 cut(s)	221
PspGI	CCWGG	2 cut(s)	158, 194
PspN4I	GGNNCC	2 cut(s)	193, 860
PspPI	GGNCC	1 cut(s)	691
PspXI	VCTCGAGB	1 cut(s)	863
PstNI	CAGNNNCTG	1 cut(s)	551
PsyI	GACNNNGTC	1 cut(s)	452
PvuII	CAGCTG	1 cut(s)	109
RruI	TCGCGA	1 cut(s)	600
RsaI	GTAC	1 cut(s)	413
RsaNI	GTAC	1 cut(s)	412
RseI	CAYNNNNRTG	1 cut(s)	34
SapI	GCTCTTC	1 cut(s)	371
SaqAI	TTAA	4 cut(s)	327, 486, 764, 782
SatI	GCNGC	2 cut(s)	107, 367
Sau3AI	GATC	5 cut(s)	351, 496, 595, 720, 745
Sau96I	GGNCC	1 cut(s)	691
SchI	GAGTC	2 cut(s)	48, 677
ScrFI	CCNGG	3 cut(s)	51, 160, 196
SduI	GDGCHC	3 cut(s)	194, 219, 383
SfaNI	GCATC	2 cut(s)	538, 592
Sfr274I	CTCGAG	1 cut(s)	863
SlaI	CTCGAG	1 cut(s)	863
SmiMI	CAYNNNNRTG	1 cut(s)	34
SmlI	CTYRAG	1 cut(s)	863
SmoI	CTYRAG	1 cut(s)	863
Sse9I	AATT	3 cut(s)	265, 536, 766
SseBI	AGGCCT	1 cut(s)	44
SsiI	CCGC	2 cut(s)	366, 415
SspMI	CTAG	3 cut(s)	173, 570, 678
StuI	AGGCCT	1 cut(s)	44
StyD4I	CCNGG	3 cut(s)	49, 158, 194
TaaI	ACNGT	3 cut(s)	96, 385, 473
TaiI	ACGT	3 cut(s)	80, 657, 712
TaqI	TCGA	2 cut(s)	686, 864
TasI	AATT	3 cut(s)	265, 536, 766
TauI	GCSGC	1 cut(s)	369
Tru1I	TTAA	4 cut(s)	327, 486, 764, 782
Tru9I	TTAA	4 cut(s)	327, 486, 764, 782
TscAI	CASTG	4 cut(s)	36, 287, 361, 388
TseFI	GTSAC	1 cut(s)	473
TseI	GCWGC	1 cut(s)	106
Tsp45I	GTSAC	1 cut(s)	473
TspDTI	ATGAA	3 cut(s)	285, 637, 804
TspRI	CASTG	4 cut(s)	36, 287, 361, 388
Tth111I	GACNNNGTC	1 cut(s)	452
XapI	RAATTY	1 cut(s)	265
XhoI	CTCGAG	1 cut(s)	863
XspI	CTAG	3 cut(s)	173, 570, 678
ZraI	GACGTC	1 cut(s)	78

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.