Snf2-ATP coupling, chromatin remodelling complex
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ResIII | PF04851 | 753 - 915 | 2.2e-12 | Type III restriction enzyme, res subunit |
| SNF2-rel_dom | PF00176 | 757 - 1048 | 8.1e-91 | SNF2-related domain |
| Helicase_C | PF00271 | 1074 - 1187 | 3.7e-21 | Helicase conserved C-terminal domain |
| SnAC | PF14619 | 1281 - 1378 | 1.7e-15 | Snf2-ATP coupling, chromatin remodelling complex |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 6082 |
| AasI | GACNNNNNNGTC | 3 cut(s) | 185, 5036, 6471 |
| AatII | GACGTC | 2 cut(s) | 8, 1035 |
| Acc36I | ACCTGC | 7 cut(s) | 88, 5386, 6082, 7645, 7768, 7891, 8014 |
| Acc65I | GGTACC | 5 cut(s) | 248, 904, 8516, 8618, 8720 |
| AccB1I | GGYRCC | 6 cut(s) | 248, 904, 5453, 8516, 8618, 8720 |
| AccB7I | CCANNNNNTGG | 5 cut(s) | 592, 734, 6461, 7964, 8108 |
| AccI | GTMKAC | 2 cut(s) | 1417, 6161 |
| AccII | CGCG | 3 cut(s) | 951, 969, 2101 |
| AccIII | TCCGGA | 1 cut(s) | 10178 |
| AclI | AACGTT | 1 cut(s) | 1235 |
| AcoI | YGGCCR | 4 cut(s) | 1684, 3559, 5365, 10339 |
| AcyI | GRCGYC | 3 cut(s) | 5, 1032, 7629 |
| AdeI | CACNNNGTG | 2 cut(s) | 734, 8240 |
| AflII | CTTAAG | 2 cut(s) | 2284, 5777 |
| AflIII | ACRYGT | 6 cut(s) | 2099, 6092, 6349, 7735, 8180, 9745 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 5899 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3999, 4031 |
| AloI | GAACNNNNNNTCC | 6 cut(s) | 1045, 1077, 4021, 4053, 4896, 4928 |
| Alw21I | GWGCWC | 5 cut(s) | 3099, 3391, 3639, 4997, 6023 |
| Alw44I | GTGCAC | 2 cut(s) | 3095, 6019 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 3034, 4451, 6037 |
| Ama87I | CYCGRG | 6 cut(s) | 2348, 5619, 8564, 8666, 8768, 10226 |
| Aor13HI | TCCGGA | 1 cut(s) | 10178 |
| ApaI | GGGCCC | 1 cut(s) | 2479 |
| ApaLI | GTGCAC | 2 cut(s) | 3095, 6019 |
| ArsI | GACNNNNNNTTYG | 7 cut(s) | 27, 386, 418, 9454, 9486, 9673, 9705 |
| AseI | ATTAAT | 2 cut(s) | 1926, 10167 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1766, 1841, 1884, 4798 |
| Asp718I | GGTACC | 5 cut(s) | 248, 904, 8516, 8618, 8720 |
| AspLEI | GCGC | 3 cut(s) | 2526, 7456, 7783 |
| AsuII | TTCGAA | 3 cut(s) | 937, 4802, 7304 |
| AsuNHI | GCTAGC | 1 cut(s) | 88 |
| AvaI | CYCGRG | 6 cut(s) | 2348, 5619, 8564, 8666, 8768, 10226 |
| AvaII | GGWCC | 8 cut(s) | 583, 1452, 2411, 2739, 4541, 4873, 7657, 7903 |
| AxyI | CCTNAGG | 3 cut(s) | 3350, 3519, 8208 |
| BaeGI | GKGCMC | 4 cut(s) | 2479, 2776, 3099, 6023 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 4374, 4407, 10617, 10650 |
| BalI | TGGCCA | 3 cut(s) | 3561, 5367, 10341 |
| BamHI | GGATCC | 3 cut(s) | 2039, 4904, 5111 |
| BanI | GGYRCC | 6 cut(s) | 248, 904, 5453, 8516, 8618, 8720 |
| BanII | GRGCYC | 9 cut(s) | 868, 2479, 3550, 4997, 8856, 9597, 9873, 10227, 10362 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3099, 3131 |
| BauI | CACGAG | 3 cut(s) | 226, 3087, 3691 |
| BbsI | GAAGAC | 7 cut(s) | 224, 282, 2823, 7406, 9086, 10545, 10574 |
| Bbv12I | GWGCWC | 5 cut(s) | 3099, 3391, 3639, 4997, 6023 |
| BceAI | ACGGC | 5 cut(s) | 1610, 2296, 5075, 6129, 9226 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 6141, 6175 |
| BciVI | GTATCC | 8 cut(s) | 6652, 6820, 6997, 7174, 8122, 8587, 8689, 8791 |
| BclI | TGATCA | 7 cut(s) | 631, 2907, 8380, 8482, 8584, 8686, 8788 |
| BfmI | CTRYAG | 4 cut(s) | 183, 6024, 9885, 10056 |
| BfoI | RGCGCY | 1 cut(s) | 7784 |
| BfrI | CTTAAG | 2 cut(s) | 2284, 5777 |
| BfuAI | ACCTGC | 7 cut(s) | 88, 5386, 6082, 7645, 7768, 7891, 8014 |
| BfuI | GTATCC | 8 cut(s) | 6652, 6820, 6997, 7174, 8122, 8587, 8689, 8791 |
| BglI | GCCNNNNNGGC | 3 cut(s) | 1478, 2452, 2876 |
| BglII | AGATCT | 1 cut(s) | 5634 |
| BlpI | GCTNAGC | 1 cut(s) | 3633 |
| BmcAI | AGTACT | 1 cut(s) | 4798 |
| Bme18I | GGWCC | 8 cut(s) | 583, 1452, 2411, 2739, 4541, 4873, 7657, 7903 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 5899 |
| BmeT110I | CYCGRG | 6 cut(s) | 2348, 5619, 8564, 8666, 8768, 10226 |
| BmrI | ACTGGG | 7 cut(s) | 862, 2745, 5066, 7425, 7952, 8041, 9818 |
| BmtI | GCTAGC | 1 cut(s) | 92 |
| BmuI | ACTGGG | 7 cut(s) | 862, 2745, 5066, 7425, 7952, 8041, 9818 |
| BoxI | GACNNNNGTC | 1 cut(s) | 7816 |
| BpiI | GAAGAC | 7 cut(s) | 224, 282, 2823, 7406, 9086, 10545, 10574 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 8306, 8338, 9662, 9694 |
| BpmI | CTGGAG | 4 cut(s) | 660, 1308, 3744, 6458 |
| Bpu10I | CCTNAGC | 2 cut(s) | 3183, 5804 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3633 |
| Bpu14I | TTCGAA | 3 cut(s) | 937, 4802, 7304 |
| Bsa29I | ATCGAT | 1 cut(s) | 7356 |
| BsaAI | YACGTR | 2 cut(s) | 922, 7738 |
| BsaBI | GATNNNNATC | 8 cut(s) | 3818, 6552, 8898, 9420, 9645, 10086, 10134, 10456 |
| BsaHI | GRCGYC | 3 cut(s) | 5, 1032, 7629 |
| BsaI | GGTCTC | 2 cut(s) | 2351, 5741 |
| BsaWI | WCCGGW | 6 cut(s) | 4222, 4387, 7834, 9206, 9959, 10178 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1225, 1255, 3450, 3480 |
| Bse21I | CCTNAGG | 3 cut(s) | 3350, 3519, 8208 |
| Bse3DI | GCAATG | 6 cut(s) | 319, 2744, 2879, 4559, 6523, 10266 |
| Bse8I | GATNNNNATC | 8 cut(s) | 3818, 6552, 8898, 9420, 9645, 10086, 10134, 10456 |
| BseAI | TCCGGA | 1 cut(s) | 10178 |
| BseCI | ATCGAT | 1 cut(s) | 7356 |
| BseJI | GATNNNNATC | 8 cut(s) | 3818, 6552, 8898, 9420, 9645, 10086, 10134, 10456 |
| BseMI | GCAATG | 6 cut(s) | 319, 2744, 2879, 4559, 6523, 10266 |
| BseSI | GKGCMC | 4 cut(s) | 2479, 2776, 3099, 6023 |
| BseYI | CCCAGC | 4 cut(s) | 284, 1187, 4998, 8202 |
| BsgI | GTGCAG | 7 cut(s) | 258, 1023, 1991, 3111, 4827, 5151, 7673 |
| Bsh1236I | CGCG | 3 cut(s) | 951, 969, 2101 |
| BshNI | GGYRCC | 6 cut(s) | 248, 904, 5453, 8516, 8618, 8720 |
| BshVI | ATCGAT | 1 cut(s) | 7356 |
| BsiHKAI | GWGCWC | 5 cut(s) | 3099, 3391, 3639, 4997, 6023 |
| BsiHKCI | CYCGRG | 6 cut(s) | 2348, 5619, 8564, 8666, 8768, 10226 |
| BsiWI | CGTACG | 1 cut(s) | 2102 |
| BsmBI | CGTCTC | 6 cut(s) | 1039, 4515, 5098, 9138, 9609, 9885 |
| Bso31I | GGTCTC | 2 cut(s) | 2351, 5741 |
| BsoBI | CYCGRG | 6 cut(s) | 2348, 5619, 8564, 8666, 8768, 10226 |
| Bsp119I | TTCGAA | 3 cut(s) | 937, 4802, 7304 |
| Bsp120I | GGGCCC | 1 cut(s) | 2475 |
| Bsp13I | TCCGGA | 1 cut(s) | 10178 |
| Bsp1407I | TGTACA | 2 cut(s) | 2304, 4279 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3633 |
| Bsp19I | CCATGG | 2 cut(s) | 174, 3993 |
| BspDI | ATCGAT | 1 cut(s) | 7356 |
| BspEI | TCCGGA | 1 cut(s) | 10178 |
| BspFNI | CGCG | 3 cut(s) | 951, 969, 2101 |
| BspHI | TCATGA | 1 cut(s) | 5625 |
| BspMAI | CTGCAG | 1 cut(s) | 6028 |
| BspMI | ACCTGC | 7 cut(s) | 88, 5386, 6082, 7645, 7768, 7891, 8014 |
| BspOI | GCTAGC | 1 cut(s) | 92 |
| BspQI | GCTCTTC | 2 cut(s) | 4746, 6267 |
| BspT104I | TTCGAA | 3 cut(s) | 937, 4802, 7304 |
| BspT107I | GGYRCC | 6 cut(s) | 248, 904, 5453, 8516, 8618, 8720 |
| BspTI | CTTAAG | 2 cut(s) | 2284, 5777 |
| BspTNI | GGTCTC | 2 cut(s) | 2351, 5741 |
| BsrDI | GCAATG | 6 cut(s) | 319, 2744, 2879, 4559, 6523, 10266 |
| BsrGI | TGTACA | 2 cut(s) | 2304, 4279 |
| BssNI | GRCGYC | 3 cut(s) | 5, 1032, 7629 |
| BssSI | CACGAG | 3 cut(s) | 226, 3087, 3691 |
| BssT1I | CCWWGG | 7 cut(s) | 174, 418, 3876, 3993, 4168, 4984, 5350 |
| Bst2BI | CACGAG | 3 cut(s) | 226, 3087, 3691 |
| BstACI | GRCGYC | 3 cut(s) | 5, 1032, 7629 |
| BstAFI | CTTAAG | 2 cut(s) | 2284, 5777 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 3193, 4574, 4718, 5387 |
| BstAUI | TGTACA | 2 cut(s) | 2304, 4279 |
| BstBAI | YACGTR | 2 cut(s) | 922, 7738 |
| BstBI | TTCGAA | 3 cut(s) | 937, 4802, 7304 |
| BstC8I | GCNNGC | 8 cut(s) | 90, 740, 771, 3534, 3673, 4566, 5298, 9028 |
| BstDSI | CCRYGG | 3 cut(s) | 174, 967, 3993 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 5807 |
| BstFNI | CGCG | 3 cut(s) | 951, 969, 2101 |
| BstH2I | RGCGCY | 1 cut(s) | 7784 |
| BstHHI | GCGC | 3 cut(s) | 2526, 7456, 7783 |
| BstNSI | RCATGY | 7 cut(s) | 698, 6096, 6353, 7568, 7867, 8184, 10027 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 7816 |
| BstSFI | CTRYAG | 4 cut(s) | 183, 6024, 9885, 10056 |
| BstSLI | GKGCMC | 4 cut(s) | 2479, 2776, 3099, 6023 |
| BstUI | CGCG | 3 cut(s) | 951, 969, 2101 |
| BstV2I | GAAGAC | 7 cut(s) | 224, 282, 2823, 7406, 9086, 10545, 10574 |
| BstX2I | RGATCY | 8 cut(s) | 2039, 4904, 5111, 5634, 6586, 6763, 8924, 10087 |
| BstXI | CCANNNNNNTGG | 7 cut(s) | 302, 425, 1015, 1484, 2855, 5059, 7259 |
| BstYI | RGATCY | 8 cut(s) | 2039, 4904, 5111, 5634, 6586, 6763, 8924, 10087 |
| Bsu15I | ATCGAT | 1 cut(s) | 7356 |
| Bsu36I | CCTNAGG | 3 cut(s) | 3350, 3519, 8208 |
| BsuI | GTATCC | 8 cut(s) | 6652, 6820, 6997, 7174, 8122, 8587, 8689, 8791 |
| BsuTUI | ATCGAT | 1 cut(s) | 7356 |
| BtgI | CCRYGG | 3 cut(s) | 174, 967, 3993 |
| BtgZI | GCGATG | 1 cut(s) | 2645 |
| BtsI | GCAGTG | 5 cut(s) | 754, 2774, 3099, 6021, 10503 |
| BveI | ACCTGC | 7 cut(s) | 88, 5386, 6082, 7645, 7768, 7891, 8014 |
| Cac8I | GCNNGC | 8 cut(s) | 90, 740, 771, 3534, 3673, 4566, 5298, 9028 |
| CaiI | CAGNNNCTG | 3 cut(s) | 3034, 4451, 6037 |
| CciI | TCATGA | 1 cut(s) | 5625 |
| CfoI | GCGC | 3 cut(s) | 2526, 7456, 7783 |
| Cfr42I | CCGCGG | 1 cut(s) | 970 |
| Cfr9I | CCCGGG | 3 cut(s) | 8564, 8666, 8768 |
| ClaI | ATCGAT | 1 cut(s) | 7356 |
| CseI | GACGC | 6 cut(s) | 390, 2939, 4927, 5717, 6147, 7618 |
| CsiI | ACCWGGT | 6 cut(s) | 4888, 7258, 8410, 8512, 8614, 8716 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 526, 561, 4717, 4752, 5013, 5048 |
| DraI | TTTAAA | 3 cut(s) | 1816, 3954, 7680 |
| DraIII | CACNNNGTG | 2 cut(s) | 734, 8240 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 185, 5036, 6471 |
| DriI | GACNNNNNGTC | 1 cut(s) | 5899 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 185, 5036, 6471 |
| EaeI | YGGCCR | 4 cut(s) | 1684, 3559, 5365, 10339 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 5899 |
| EciI | GGCGGA | 1 cut(s) | 10470 |
| Ecl136II | GAGCTC | 1 cut(s) | 4995 |
| Eco130I | CCWWGG | 7 cut(s) | 174, 418, 3876, 3993, 4168, 4984, 5350 |
| Eco147I | AGGCCT | 8 cut(s) | 769, 2611, 4050, 4975, 6625, 6793, 7147, 7318 |
| Eco24I | GRGCYC | 9 cut(s) | 868, 2479, 3550, 4997, 8856, 9597, 9873, 10227, 10362 |
| Eco31I | GGTCTC | 2 cut(s) | 2351, 5741 |
| Eco32I | GATATC | 7 cut(s) | 3820, 7354, 8353, 8455, 8557, 8659, 8761 |
| Eco47I | GGWCC | 8 cut(s) | 583, 1452, 2411, 2739, 4541, 4873, 7657, 7903 |
| Eco53kI | GAGCTC | 1 cut(s) | 4995 |
| Eco81I | CCTNAGG | 3 cut(s) | 3350, 3519, 8208 |
| Eco88I | CYCGRG | 6 cut(s) | 2348, 5619, 8564, 8666, 8768, 10226 |
| EcoICRI | GAGCTC | 1 cut(s) | 4995 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 5807 |
| EcoO109I | RGGNCCY | 7 cut(s) | 2411, 2476, 2739, 4873, 5009, 7657, 7903 |
| EcoRI | GAATTC | 6 cut(s) | 1182, 1746, 3601, 8807, 9275, 10666 |
| EcoRV | GATATC | 7 cut(s) | 3820, 7354, 8353, 8455, 8557, 8659, 8761 |
| EcoT14I | CCWWGG | 7 cut(s) | 174, 418, 3876, 3993, 4168, 4984, 5350 |
| EcoT22I | ATGCAT | 4 cut(s) | 364, 718, 2677, 7669 |
| EcoT38I | GRGCYC | 9 cut(s) | 868, 2479, 3550, 4997, 8856, 9597, 9873, 10227, 10362 |
| ErhI | CCWWGG | 7 cut(s) | 174, 418, 3876, 3993, 4168, 4984, 5350 |
| Esp3I | CGTCTC | 6 cut(s) | 1039, 4515, 5098, 9138, 9609, 9885 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1754, 1786, 3561, 3593 |
| FauI | CCCGC | 1 cut(s) | 8370 |
| FauNDI | CATATG | 3 cut(s) | 2581, 7344, 7425 |
| FbaI | TGATCA | 7 cut(s) | 631, 2907, 8380, 8482, 8584, 8686, 8788 |
| FblI | GTMKAC | 2 cut(s) | 1417, 6161 |
| FriOI | GRGCYC | 9 cut(s) | 868, 2479, 3550, 4997, 8856, 9597, 9873, 10227, 10362 |
| GlaI | GCGC | 3 cut(s) | 2525, 7455, 7782 |
| GsaI | CCCAGC | 4 cut(s) | 288, 1191, 5002, 8206 |
| GsuI | CTGGAG | 4 cut(s) | 660, 1308, 3744, 6458 |
| HaeII | RGCGCY | 1 cut(s) | 7784 |
| HgaI | GACGC | 6 cut(s) | 390, 2939, 4927, 5717, 6147, 7618 |
| HhaI | GCGC | 3 cut(s) | 2526, 7456, 7783 |
| Hin1I | GRCGYC | 3 cut(s) | 5, 1032, 7629 |
| Hin6I | GCGC | 3 cut(s) | 2524, 7454, 7781 |
| HinP1I | GCGC | 3 cut(s) | 2524, 7454, 7781 |
| HincII | GTYRAC | 6 cut(s) | 1418, 2067, 2733, 5893, 6162, 6289 |
| HindII | GTYRAC | 6 cut(s) | 1418, 2067, 2733, 5893, 6162, 6289 |
| HindIII | AAGCTT | 5 cut(s) | 213, 1166, 1571, 3221, 5790 |
| HpaI | GTTAAC | 2 cut(s) | 2733, 6289 |
| Hpy99I | CGWCG | 6 cut(s) | 1337, 1381, 2123, 2955, 6163, 8087 |
| Hsp92I | GRCGYC | 3 cut(s) | 5, 1032, 7629 |
| HspAI | GCGC | 3 cut(s) | 2524, 7454, 7781 |
| KflI | GGGWCCC | 1 cut(s) | 2739 |
| Kpn2I | TCCGGA | 1 cut(s) | 10178 |
| KpnI | GGTACC | 5 cut(s) | 252, 908, 8520, 8622, 8724 |
| Ksp22I | TGATCA | 7 cut(s) | 631, 2907, 8380, 8482, 8584, 8686, 8788 |
| KspAI | GTTAAC | 2 cut(s) | 2733, 6289 |
| KspI | CCGCGG | 1 cut(s) | 970 |
| LguI | GCTCTTC | 2 cut(s) | 4746, 6267 |
| MabI | ACCWGGT | 6 cut(s) | 4888, 7258, 8410, 8512, 8614, 8716 |
| MfeI | CAATTG | 2 cut(s) | 1482, 3201 |
| MflI | RGATCY | 8 cut(s) | 2039, 4904, 5111, 5634, 6586, 6763, 8924, 10087 |
| MlsI | TGGCCA | 3 cut(s) | 3561, 5367, 10341 |
| MluI | ACGCGT | 1 cut(s) | 2099 |
| MluNI | TGGCCA | 3 cut(s) | 3561, 5367, 10341 |
| MmeI | TCCRAC | 9 cut(s) | 9, 283, 492, 3213, 4286, 4692, 5650, 6174, 7544 |
| Mox20I | TGGCCA | 3 cut(s) | 3561, 5367, 10341 |
| Mph1103I | ATGCAT | 4 cut(s) | 364, 718, 2677, 7669 |
| MroI | TCCGGA | 1 cut(s) | 10178 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1766, 1841, 1884, 4798 |
| MscI | TGGCCA | 3 cut(s) | 3561, 5367, 10341 |
| Msp20I | TGGCCA | 3 cut(s) | 3561, 5367, 10341 |
| MspA1I | CMGCKG | 8 cut(s) | 969, 1579, 3632, 3671, 4403, 8348, 8873, 9143 |
| MspCI | CTTAAG | 2 cut(s) | 2284, 5777 |
| MunI | CAATTG | 2 cut(s) | 1482, 3201 |
| MvnI | CGCG | 3 cut(s) | 951, 969, 2101 |
| NcoI | CCATGG | 2 cut(s) | 174, 3993 |
| NdeI | CATATG | 3 cut(s) | 2581, 7344, 7425 |
| NheI | GCTAGC | 1 cut(s) | 88 |
| NmeAIII | GCCGAG | 5 cut(s) | 2896, 3910, 4622, 8488, 10612 |
| NsiI | ATGCAT | 4 cut(s) | 364, 718, 2677, 7669 |
| NspI | RCATGY | 7 cut(s) | 698, 6096, 6353, 7568, 7867, 8184, 10027 |
| NspV | TTCGAA | 3 cut(s) | 937, 4802, 7304 |
| PacI | TTAATTAA | 1 cut(s) | 10167 |
| PaeR7I | CTCGAG | 1 cut(s) | 5619 |
| PagI | TCATGA | 1 cut(s) | 5625 |
| PaqCI | CACCTGC | 1 cut(s) | 6082 |
| PceI | AGGCCT | 8 cut(s) | 769, 2611, 4050, 4975, 6625, 6793, 7147, 7318 |
| PciI | ACATGT | 3 cut(s) | 6092, 6349, 8180 |
| PciSI | GCTCTTC | 2 cut(s) | 4746, 6267 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 1888, 6836, 10617 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1766, 1841, 1884, 4798 |
| Pfl23II | CGTACG | 1 cut(s) | 2102 |
| PflFI | GACNNNGTC | 1 cut(s) | 4150 |
| PflMI | CCANNNNNTGG | 5 cut(s) | 592, 734, 6461, 7964, 8108 |
| PfoI | TCCNGGA | 2 cut(s) | 7659, 10447 |
| Ppu21I | YACGTR | 2 cut(s) | 922, 7738 |
| PpuMI | RGGWCCY | 5 cut(s) | 2411, 2739, 4873, 7657, 7903 |
| PscI | ACATGT | 3 cut(s) | 6092, 6349, 8180 |
| PshAI | GACNNNNGTC | 1 cut(s) | 7816 |
| PshBI | ATTAAT | 2 cut(s) | 1926, 10167 |
| Psp124BI | GAGCTC | 1 cut(s) | 4997 |
| Psp1406I | AACGTT | 1 cut(s) | 1235 |
| Psp5II | RGGWCCY | 5 cut(s) | 2411, 2739, 4873, 7657, 7903 |
| PspFI | CCCAGC | 4 cut(s) | 284, 1187, 4998, 8202 |
| PspLI | CGTACG | 1 cut(s) | 2102 |
| PspOMI | GGGCCC | 1 cut(s) | 2475 |
| PspPPI | RGGWCCY | 5 cut(s) | 2411, 2739, 4873, 7657, 7903 |
| PspXI | VCTCGAGB | 1 cut(s) | 5619 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 5563, 5595 |
| PstI | CTGCAG | 1 cut(s) | 6028 |
| PstNI | CAGNNNCTG | 3 cut(s) | 3034, 4451, 6037 |
| PsuI | RGATCY | 8 cut(s) | 2039, 4904, 5111, 5634, 6586, 6763, 8924, 10087 |
| PsyI | GACNNNGTC | 1 cut(s) | 4150 |
| PvuII | CAGCTG | 6 cut(s) | 1579, 3632, 4403, 8348, 8873, 9143 |
| SacI | GAGCTC | 1 cut(s) | 4997 |
| SacII | CCGCGG | 1 cut(s) | 970 |
| SalI | GTCGAC | 2 cut(s) | 1416, 6160 |
| SapI | GCTCTTC | 2 cut(s) | 4746, 6267 |
| ScaI | AGTACT | 1 cut(s) | 4798 |
| SexAI | ACCWGGT | 6 cut(s) | 4888, 7258, 8410, 8512, 8614, 8716 |
| SfcI | CTRYAG | 4 cut(s) | 183, 6024, 9885, 10056 |
| Sfr274I | CTCGAG | 1 cut(s) | 5619 |
| Sfr303I | CCGCGG | 1 cut(s) | 970 |
| SfuI | TTCGAA | 3 cut(s) | 937, 4802, 7304 |
| SgrBI | CCGCGG | 1 cut(s) | 970 |
| SinI | GGWCC | 8 cut(s) | 583, 1452, 2411, 2739, 4541, 4873, 7657, 7903 |
| SlaI | CTCGAG | 1 cut(s) | 5619 |
| SmaI | CCCGGG | 3 cut(s) | 8566, 8668, 8770 |
| SmiI | ATTTAAAT | 1 cut(s) | 7680 |
| SrfI | GCCCGGGC | 3 cut(s) | 8566, 8668, 8770 |
| SseBI | AGGCCT | 8 cut(s) | 769, 2611, 4050, 4975, 6625, 6793, 7147, 7318 |
| SstI | GAGCTC | 1 cut(s) | 4997 |
| StuI | AGGCCT | 8 cut(s) | 769, 2611, 4050, 4975, 6625, 6793, 7147, 7318 |
| StyI | CCWWGG | 7 cut(s) | 174, 418, 3876, 3993, 4168, 4984, 5350 |
| SwaI | ATTTAAAT | 1 cut(s) | 7680 |
| TaqII | GACCGA | 1 cut(s) | 9479 |
| TatI | WGTACW | 6 cut(s) | 1386, 2304, 4279, 4796, 4927, 5405 |
| TauI | GCSGC | 2 cut(s) | 4493, 9499 |
| TspGWI | ACGGA | 9 cut(s) | 272, 6845, 6940, 7199, 7788, 9098, 9569, 10334, 10586 |
| TspMI | CCCGGG | 3 cut(s) | 8564, 8666, 8768 |
| Tth111I | GACNNNGTC | 1 cut(s) | 4150 |
| Van91I | CCANNNNNTGG | 5 cut(s) | 592, 734, 6461, 7964, 8108 |
| Vha464I | CTTAAG | 2 cut(s) | 2284, 5777 |
| VneI | GTGCAC | 2 cut(s) | 3095, 6019 |
| VpaK11BI | GGWCC | 8 cut(s) | 583, 1452, 2411, 2739, 4541, 4873, 7657, 7903 |
| VspI | ATTAAT | 2 cut(s) | 1926, 10167 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 5807 |
| XbaI | TCTAGA | 1 cut(s) | 1178 |
| XceI | RCATGY | 7 cut(s) | 698, 6096, 6353, 7568, 7867, 8184, 10027 |
| XcmI | CCANNNNNNNNNTGG | 6 cut(s) | 735, 1072, 6679, 7024, 7201, 7372 |
| XhoI | CTCGAG | 1 cut(s) | 5619 |
| XmaI | CCCGGG | 3 cut(s) | 8564, 8666, 8768 |
| XmiI | GTMKAC | 2 cut(s) | 1417, 6161 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1766, 1841, 1884, 4798 |
| ZraI | GACGTC | 2 cut(s) | 6, 1033 |
| ZrmI | AGTACT | 1 cut(s) | 4798 |
| Zsp2I | ATGCAT | 4 cut(s) | 364, 718, 2677, 7669 |