Rroxscaffold_5G00363240
NAC Family

Chromatin structure-remodeling complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0001231
Physical Location & Seq
Reverse (-)
44348400 .. 44369763
21364 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00363240.1

Sequence Viewer

Length: 5511 bp
ATGCTTCCACTTGATAAATCAGGGGATTCACGTGGGAGCAAAGACATAGACATGAGAAGTAAGCAAGAGGCTGATGTTTTAGCAGGTGAGGATATAAATTCAACTCCAAATTCAGTTAACTTAGCCCAAGTTAAGCAGACTACAAACTCATCCATGGGCCCTGCATCAGGAGAAAGTCCAAACCTAAAAGAGGCTTTGCCTGAAAATTGCTCATCCAAACCTAAGAATGATAAGATTTCTGGAGATGAAGGTTCTACCACACCAGCTGCTGTATCAAATGAGACCATTTCAGAGGTGAATAAGAGTCATACTCTGGAGGAGAAAGCTCTTCCAGCAATTCCAACTTTGATCGCTGCATCTCCTGTTTTTAATCCTTCAACTGTTTTTAATCCTTCAACTGGTTCCCTTCCCGGTTCTACTCCCATGGAAAGCACTGGTGAGGCAAAACATCATGGTGCTGAGATTTCTCCTAGCTCTCAGTCAAAGCTGTCCTCTTCTGTTTCTCCTTCTTCTCAGTCTATCACTCCTAGCCCTTCCAAACCTGTGGAAGTCAAAAAACAGGTTCGAAAGGCTTCAAGCAGAGCTGAAGCACCCCGTCGCAGGGGAAGGAAGCAGGCTCCTGTGTTCCCAGCTGTTTCTGGTGGTCCAGCTAGTCAGGATCCAGAATTAAGTTTTCAGGTACAGGATATGTCTGCTGGTACGTTGGGGAGTAAGACTGCTGAACTGGGAAGAAAGCAAGGTACTGATGGGCAGGAACTGTCACATGTTATTCAATCCCAGACAAGTCAAGTGCATTTAGTTAGCAGTTTAACTGATTCTGATCCAAAAAGAAAAGAGCACCCAAGCTATCCTACACAAAATAAGCAGCCTACAAACTCATCATCAACAATTGACAGTGCTGCTGGATCCTCTGATAAGAGTTCTGCTCTGGGACGTATCCAGACTGCTAACGTAAATGATGTTGCTCGTGTGATGAAAGAGGTCTTTTCTGGCACACGTCTATCAAAAGCGAAAATTTCTGAGTCTTTTGGGAGAGAAGGTCGTGGTTCCCCCCGTGTACCTGTATCCAGTAAGACTCCGGTGGACATGGCCGAAAACCAAAATCTGGAGGATAAAGCATGTTCTGGTGTGGAATTGAAGGTTTCTGAACCTGAGATGGGTGATCTTTCGAATGCGTCCAAGGTTGGTGCAGTGGTTGTTCCAGAAAACATTACCTCCTTAGCAACTGAAGGAAAAAAGGTAGACTGCTTACCTGTTGGCAGCTTAGTAACACTGGAGAGTTCAAAAGGATCTCCAGCTGAAAAGGATTCTTTGATGGCTTCCTACAATGCTTCTGGGAGAGTGGCAGAAATTGATCAGCCTGTGGTTACATTGACCATGGGCAGTAATAGTGTTGAATGCTCATCTGAGGCAGGGCCAGTGGGCGGTCTTAAATCACAGGGGTCAGAACATGAAGCTAGAGCTAGTGATGCTTTTCAGGTTTCCGGAACACTGGCAGAAAATGTGTCTGGAAACATGGATCAGCCCTTGGTAACCTTGAGCAAGGAGTGTGCTAGTGTTGCAGCCTTGTCTGAGCCAGGGACTCTAGGATGCTCCAAGTCACCAGAGGAGTCGGGCTGTGAAGCTAAAGTTGGTGATACTTCTCAGATTTGTGGAATGTTGCCAGAAAATGTTTCTGGAAAAATGGATCAGTCTCTGGTTACTTTGACCATGGGAGGTGATAGTGTTGTAGGCTTATGTGAGGCACAACCTATAGACAGCCCCAAGCCACCAGAGGAGTTAGAATGTGCAGCTATAGACAGCTCCAAGCCACCAGAGGAGTTAGAATGTGCAGCTAAAGTTGTTGAAACTTCTCAGGTTTCTGTGACAAACATAGATCACCCTCCGATTACCTTGACTATGGGGGGTGATAGTGTTGAAGGCTCTGAGGCAGGTCCTGTAGGTAGCTCCAAACCTCCAGAGGAGGTGGAATGTGAGGCTAAAGTTGGTAATACTTCTCAAGTTAACGAGCCAATGCCGGAAAATGCATCTGAAAACCTGGATTTCCAGCCCTCTTATGAAGCTAAAGTTGATGATGTTTCTGAGGTTTGTGAGATATCGACAGAAGTTGTGCCTGAAAACATGGATTTGCAGCCATCTTCAACAGGGCAGGAGTTGGAATCTGAAGCTAAATTTGGTGTTGCTTCTCAGGTTCGTGAGACGGTGTTGGACATTGTATCTGAAAACATGGAATTGCAGCCATATTCAACAGTGCAAGAGTTGAAATCTGAAGACAAAGTTGATGCCTCTCAGGTTTGTGAGACAGTGTTGGAATTTGTACCTGAGAAAATGGATTTGCAGCCATCTTCAACAGTGCAGGAGTCGGAATCTGAAGCTAGAGGTGGTGAGGCTTCTCAGGTTAGCAAAACATTGCTGGAGTCTGAAAACATGGATTCACAGACATCGGCAACAGCACACGACTCGGTAGCTGAAGCTAAAGCTGGTGAAGCGTTTCAGTTTAGTGAAACATTGCTAGAGTCTGAAAACATGGATTTGCAAACATGTTCAACAGCACAGGAATCAGAATCTGAAGCAAAAGTAAGTGATGCATCTGAGGTTTGTGAGACATTGCTGGTGTCCGAAAACATGCATTTGCAACCATCTTTAACAGTTCAGGATACACAATCTGAAGCTAAAGTTGGTGATGATTCTCAGGTTTGTGAGACATTGCCGGAGTCTGAAAACATGGATTTGCAGCCATCTTCAGGAGCACAAGTGTCTGAAGCTGATGTTGAAGTGGGTGATGTTTCTCAGGTTTGTGAGACATTGCCGGAGTCTGAAAACATGGATTTGCAACCATCTTCAACTGTACAGGAGTCTGAAGCTGAAGCTAACATTTCTGAATCTTTTGGGAGAGAATGTAGTGTTTCCCCTGGTGTACCTGTATGCAGTGAGACTCCGGTGGACATGGCCAAAAACCAAAATTTGGAGGATAAAGCATGTTCTGGTGTGGAATTGAAGGTTTCTGAAACTGAGATGGGAGATCTTTTGAATGCGTCCGAGGCTGACAAGGTGGTTGTTCCAGAAAATGCATCTTCAGAAAACATTGATTTCTCTGCATCCTCAGTAGCAAACAAAGGAAAGATGGTTGATTGCGTACCTGGAGGTTCTGTTGGCTGCTCAGTAACACTGCAGAGATCAAATGAATCTCCAGCTGAAAAGGATTTGATGAATTCTTATGATGCTTTTGGGAGAGTGGCAGAAATTGAATCTGAAAACATTGATCAGCCTCCCGTTACGTTGACCATGGGCAGTGATAGTGTTGAAGGCTCATCTGAGGCAGGGCCTTTAGGCAGTCTCAAATCACAGGAGTCAGAGCATGAATGTAAAGTTAGTGATGCTTTTCAGGTTTCTGTGACATTGCCAGAAAATGTGTCTGGAAACATGGATCAGCCTTTGATTACTTTGAGCAATGGGTGTGATACTGTTGAAGCCTTATCTGTGCCCAAGTCTTCTGAGGAGTCGGACTGTAAAGCTAAAGTTGGTGACGCTTCTCAGATTTGTGCAACGCTGCCAGAAATTTTTTCTTGTAACGCGGATCAGCCTGCGGTTACTATGACCATTGGAGGTAATAGTGTTGCAGACTTACCTGAGGCACAACCTATCGGCAGCTCCAAGCGACCAGAGGAGTTAGAATGTGAAGTTAAAGTCGTTGAAGCTTCTCAGGTTTGTGGGACATGGCCAGAAAATACTTCTGAAAGCATGGATCAGCCTCCAGCTACATTGACCGTGACGTGTGATAGTGTTGAAGCCTCATTTGACGCGGGTCCTGTAAGAAGCCCCAAACCTCTAGAGGAGATGGGGTGTGAAGCCAAAGTTGGTGATGCTTCTCAAGTTTGTGAGTCATTGCCGACAAATGTGTCTGAAAACATGAATTTCCAGCCCTCTTCTGACACTAAAATTGGTGATAATCCTGAGGTTTTTGAGACATTGACAGAAGTTGAAAACATGGATTTGCAGCCATCTTCAACGGTGCAGGAGTCGGAATCTGAAGCTAAAGTTGGTGATGCTTCTGAGATTGGTGAGACATTGACGGAAGTTGTGCCTGAAAACCTGGATTTGCAGCCATCTTCAACAGTGCAGGAGTCGAAATCTGAAGCTAAAGTTGGTGATGCTTCTAACATTTGTGAGACATTTTTGGGATTTGTGCCTGAAAACATGGATTCACAGCCATCTTCAAGAGTGCAGGAGTTGGAGTCTGACACTAAAGTTGGTGAGACATCGACAGAAATTGTGTGCGAAAAAATGGATATGCAGCCATCTTCAACAGTGCCGGAGTTGGAATCTGAAGCTAAAGTTGGTGATGCTTCTCATGTTTGTGAGACACTGTTGGAATTTGTTCCTGAAAACATGGATTTGCAGCCATCTTCAACAGCGCTGGAGTTGCAATGTGAAGCTAAATTTGGTGTTACTTCTGAGGTTTGTGAGACCATAACAGAAATTGTATCTGAAAACATGGATTTGCAGCCATCTTTAATGTCACCTGAGTCGGAATCTAAAGCTAAAGTTGGTGAGGCTTCTCAGGTTTGTGAGACATTGCCAGAGTCTGAAAATATGGATTTGCAGCCATCTTCAACTGCACTGGAATCTGAAGCTAAAGTTGGTGATACGTCTCCAGTTTGTGAGACATCGCCGGAGTCCAAAAACATGGATTTGCAGCCATCTTCAGGAGCACACGATTCTGAAGCTGATGCTAAAGTGGGTGATGTTTCTCAGGTTTGTGAGACATTGCTGGAGTCTGAAAACTTGGATTTGCAGCCATCTTCAACTGCACAGGAATCTGAAGCGAAAGTTAGTGATGCGTCTCAGGTTTGTGAGACATCGCCGGAGCCCAAAAACATGGATTTGCAGCCATCTCCGACAGCAGAGGAGTCAGAATCTGTAGATAAAGTTGGTGATGTGTCTCAGGTTTGTGAGACATTACCGGAGTCCGTTAACATGGATTTGCAGCCATGTTCAACAGCACATGAGTCGGAATCTGAAGCTAAAGTTGGTGAGGCGTCTCAGGTTTGTGAGACATTGCTGGAGTCTGTAAACATGGATTTGCAGCCATGTTTGACAGCACATGAGTCGGAATCTGAAGTGAAAGTTGGTGAGGCGTCTCAGGTTTGTGAGACATTGCCGGAGTCTGTAAACATGGATTTGACATTGCGAGAGTCTGGAAACATGGATTTGCAGTCACCTTCAGCAGCACATGAGTCTGAATCTGAAGCTAAAATTGGTGATGATTCCAAGGTTCGTGAGACATTGCCGGAGTCTGACAACATGGATTTGCAGCCATCTTCAACAGCACTTGAGTCAGAATCTGAAGCTAAAGGTGGTGAGGCTTCTCAGGTTTGTGAGACGTTGCTAGGAAATGTGCCCAAAAACATGGATATGCCACCATTGGCAACAGCGCAGGAGGTTGAAGACGTGAAGTTATCGTCTGAGGAACCCGTCGGTAGCTCAGGGGCACCGCCTAAAGCTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000166 GO:0000228 GO:0000785 GO:0000790 GO:0000988 GO:0000990 GO:0000991 GO:0002831 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005829 GO:0006139 GO:0006325 GO:0006338 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0006996 GO:0007275 GO:0008026 GO:0008094 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009611 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009966 GO:0009987 GO:0010104 GO:0010199 GO:0010467 GO:0010468 GO:0010556 GO:0010646 GO:0010959 GO:0016043 GO:0016070 GO:0016462 GO:0016514 GO:0016586 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022414 GO:0023051 GO:0030554 GO:0031323 GO:0031326 GO:0031347 GO:0031974 GO:0031981 GO:0032101 GO:0032392 GO:0032501 GO:0032502 GO:0032508 GO:0032553 GO:0032555 GO:0032559 GO:0032774 GO:0032879 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0034756 GO:0035639 GO:0036094 GO:0040029 GO:0042623 GO:0043044 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043269 GO:0043900 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048367 GO:0048583 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048859 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0070035 GO:0070297 GO:0070603 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0090304 GO:0090567 GO:0090691 GO:0097159 GO:0097367 GO:0097659 GO:0140097 GO:0140110 GO:1900150 GO:1900390 GO:1900393 GO:1900400 GO:1901265 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902494 GO:1902531 GO:1903506 GO:1904949 GO:2000022 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04714 ko05225 map04714 map05225
Pfam Domains
Protein Families
Helicase_C SNF2_N SnAC

Protein Analysis

1836

Amino Acids

193.17

Weight (kDa)

4.17

Isoelectric Point (pI)

61.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 74
AasI GACNNNNNNGTC 1 cut(s) 3898
Acc36I ACCTGC 2 cut(s) 74, 1922
AccB1I GGYRCC 1 cut(s) 5491
AccB7I CCANNNNNTGG 2 cut(s) 1105, 2965
AccI GTMKAC 1 cut(s) 1242
AccII CGCG 2 cut(s) 3575, 3803
AccIII TCCGGA 1 cut(s) 1484
AciI CCGC 5 cut(s) 1425, 3575, 3587, 3803, 5495
AcoI YGGCCR 3 cut(s) 1089, 2949, 3719
AcvI CACGTG 1 cut(s) 32
AcyI GRCGYC 2 cut(s) 5039, 5138
AfaI GTAC 8 cut(s) 681, 700, 742, 1059, 2319, 2850, 2919, 3138
AfeI AGCGCT 1 cut(s) 4416
AflIII ACRYGT 4 cut(s) 763, 995, 2540, 3773
AjiI CACGTC 3 cut(s) 998, 3774, 5452
AjnI CCWGG 5 cut(s) 1576, 2037, 2911, 3139, 4092
Alw21I GWGCWC 3 cut(s) 840, 2752, 4714
AlwNI CAGNNNCTG 8 cut(s) 269, 757, 1696, 1937, 2567, 4586, 4919, 5345
Aor13HI TCCGGA 1 cut(s) 1484
Aor51HI AGCGCT 1 cut(s) 4416
AoxI GGCC 6 cut(s) 157, 1089, 1415, 2949, 3323, 3719
ApaI GGGCCC 1 cut(s) 161
Asp700I GAANNNNTTC 3 cut(s) 571, 2490, 4377
AspLEI GCGC 2 cut(s) 4417, 5437
AspS9I GGNCC 7 cut(s) 157, 158, 644, 1415, 1934, 3323, 3806
AsuC2I CCSGG 1 cut(s) 411
AsuII TTCGAA 2 cut(s) 565, 1169
AvaII GGWCC 3 cut(s) 644, 1934, 3806
AxyI CCTNAGG 2 cut(s) 3630, 3954
BaeGI GKGCMC 4 cut(s) 161, 3486, 5403, 5494
BalI TGGCCA 2 cut(s) 2951, 3721
BamHI GGATCC 2 cut(s) 658, 905
BanI GGYRCC 1 cut(s) 5491
BanII GRGCYC 2 cut(s) 161, 4872
BauI CACGAG 1 cut(s) 966
BbrPI CACGTG 1 cut(s) 32
BbsI GAAGAC 3 cut(s) 2277, 3483, 5454
Bbv12I GWGCWC 3 cut(s) 840, 2752, 4714
BcgI CGANNNNNNTGC 6 cut(s) 2442, 2476, 4992, 5026, 5091, 5125
BciT130I CCWGG 5 cut(s) 1578, 2039, 2913, 3141, 4094
BciVI GTATCC 3 cut(s) 947, 1075, 2650
BclI TGATCA 2 cut(s) 1354, 3262
BcnI CCSGG 1 cut(s) 411
BfmI CTRYAG 5 cut(s) 1752, 1794, 1938, 3170, 4920
BfoI RGCGCY 1 cut(s) 4418
BfuAI ACCTGC 2 cut(s) 74, 1922
BfuI GTATCC 3 cut(s) 947, 1075, 2650
BglII AGATCT 1 cut(s) 3022
Bme1390I CCNGG 6 cut(s) 411, 1578, 2039, 2913, 3141, 4094
Bme18I GGWCC 3 cut(s) 644, 1934, 3806
BmgBI CACGTC 3 cut(s) 998, 3774, 5452
BmgT120I GGNCC 7 cut(s) 157, 158, 644, 1415, 1934, 3323, 3806
BmrFI CCNGG 6 cut(s) 411, 1578, 2039, 2913, 3141, 4094
BmrI ACTGGG 1 cut(s) 734
BmuI ACTGGG 1 cut(s) 734
BoxI GACNNNNGTC 1 cut(s) 3804
BpiI GAAGAC 3 cut(s) 2277, 3483, 5454
BplI GAGNNNNNCTC 4 cut(s) 295, 327, 910, 942
Bpu10I CCTNAGC 2 cut(s) 1219, 5485
Bpu14I TTCGAA 2 cut(s) 565, 1169
BpuEI CTTGAG 4 cut(s) 1558, 1983, 3855, 5354
BpuMI CCSGG 1 cut(s) 411
BsaAI YACGTR 1 cut(s) 32
BsaBI GATNNNNATC 1 cut(s) 819
BsaHI GRCGYC 2 cut(s) 5039, 5138
BsaI GGTCTC 2 cut(s) 275, 4460
BsaWI WCCGGW 4 cut(s) 1078, 1484, 2938, 4963
Bse1I ACTGG 9 cut(s) 403, 439, 729, 1068, 1278, 1418, 1497, 4626, 4655
Bse21I CCTNAGG 2 cut(s) 3630, 3954
Bse8I GATNNNNATC 1 cut(s) 819
BseAI TCCGGA 1 cut(s) 1484
BseBI CCWGG 5 cut(s) 1578, 2039, 2913, 3141, 4094
BseGI GGATG 4 cut(s) 149, 212, 1595, 3098
BseJI GATNNNNATC 1 cut(s) 819
BseNI ACTGG 9 cut(s) 403, 439, 729, 1068, 1278, 1418, 1497, 4626, 4655
BseRI GAGGAG 9 cut(s) 332, 1622, 1790, 1832, 1976, 3512, 3680, 3848, 4922
BseSI GKGCMC 4 cut(s) 161, 3486, 5403, 5494
BseYI CCCAGC 1 cut(s) 628
BsgI GTGCAG 9 cut(s) 1209, 1809, 1851, 2375, 4034, 4139, 4244, 4602, 4794
Bsh1236I CGCG 2 cut(s) 3575, 3803
BshFI GGCC 6 cut(s) 159, 1091, 1417, 2951, 3325, 3721
BshNI GGYRCC 1 cut(s) 5491
BsiHKAI GWGCWC 3 cut(s) 840, 2752, 4714
BslFI GGGAC 3 cut(s) 945, 1594, 3727
BsmBI CGTCTC 6 cut(s) 2192, 4656, 4848, 5046, 5145, 5375
BsmFI GGGAC 3 cut(s) 945, 1594, 3727
BsmI GAATGC 3 cut(s) 1177, 1403, 3037
BsnI GGCC 6 cut(s) 159, 1091, 1417, 2951, 3325, 3721
Bso31I GGTCTC 2 cut(s) 275, 4460
Bsp119I TTCGAA 2 cut(s) 565, 1169
Bsp120I GGGCCC 1 cut(s) 157
Bsp1286I GDGCHC 8 cut(s) 161, 840, 2752, 3486, 4714, 4872, 5403, 5494
Bsp13I TCCGGA 1 cut(s) 1484
Bsp1407I TGTACA 1 cut(s) 2848
Bsp19I CCATGG 5 cut(s) 153, 423, 1377, 1710, 3285
BspACI CCGC 5 cut(s) 1425, 3575, 3587, 3803, 5495
BspANI GGCC 6 cut(s) 159, 1091, 1417, 2951, 3325, 3721
BspEI TCCGGA 1 cut(s) 1484
BspFNI CGCG 2 cut(s) 3575, 3803
BspMAI CTGCAG 1 cut(s) 3174
BspMI ACCTGC 2 cut(s) 74, 1922
BspQI GCTCTTC 1 cut(s) 333
BspT104I TTCGAA 2 cut(s) 565, 1169
BspT107I GGYRCC 1 cut(s) 5491
BspTNI GGTCTC 2 cut(s) 275, 4460
BsrGI TGTACA 1 cut(s) 2848
BsrI ACTGG 9 cut(s) 403, 439, 729, 1068, 1278, 1418, 1497, 4626, 4655
BssNI GRCGYC 2 cut(s) 5039, 5138
BssSI CACGAG 1 cut(s) 966
BssT1I CCWWGG 8 cut(s) 153, 423, 1179, 1377, 1527, 1710, 3285, 5271
Bst2BI CACGAG 1 cut(s) 966
Bst2UI CCWGG 5 cut(s) 1578, 2039, 2913, 3141, 4094
Bst6I CTCTTC 3 cut(s) 333, 499, 3931
BstACI GRCGYC 2 cut(s) 5039, 5138
BstAUI TGTACA 1 cut(s) 2848
BstBAI YACGTR 1 cut(s) 32
BstBI TTCGAA 2 cut(s) 565, 1169
BstC8I GCNNGC 2 cut(s) 615, 3585
BstDSI CCRYGG 5 cut(s) 153, 423, 1377, 1710, 3285
BstEII GGTNACC 1 cut(s) 1531
BstENI CCTNNNNNAGG 2 cut(s) 165, 188
BstF5I GGATG 4 cut(s) 149, 212, 1595, 3098
BstFNI CGCG 2 cut(s) 3575, 3803
BstH2I RGCGCY 1 cut(s) 4418
BstHHI GCGC 2 cut(s) 4417, 5437
BstMWI GCNNNNNNNGC 6 cut(s) 332, 1469, 1559, 2486, 3041, 4423
BstNI CCWGG 5 cut(s) 1578, 2039, 2913, 3141, 4094
BstNSI RCATGY 5 cut(s) 767, 1122, 2544, 2629, 2982
BstPAI GACNNNNGTC 1 cut(s) 3804
BstPI GGTNACC 1 cut(s) 1531
BstSCI CCNGG 6 cut(s) 409, 1576, 2037, 2911, 3139, 4092
BstSFI CTRYAG 5 cut(s) 1752, 1794, 1938, 3170, 4920
BstSLI GKGCMC 4 cut(s) 161, 3486, 5403, 5494
BstUI CGCG 2 cut(s) 3575, 3803
BstV2I GAAGAC 3 cut(s) 2277, 3483, 5454
BstX2I RGATCY 4 cut(s) 658, 905, 1289, 3022
BstXI CCANNNNNNTGG 4 cut(s) 544, 4687, 4879, 5410
BstYI RGATCY 4 cut(s) 658, 905, 1289, 3022
Bsu36I CCTNAGG 2 cut(s) 3630, 3954
BsuI GTATCC 3 cut(s) 947, 1075, 2650
BsuRI GGCC 6 cut(s) 159, 1091, 1417, 2951, 3325, 3721
BtgI CCRYGG 5 cut(s) 153, 423, 1377, 1710, 3285
BtgZI GCGATG 2 cut(s) 4653, 4845
BtrI CACGTC 3 cut(s) 998, 3774, 5452
BtsCI GGATG 4 cut(s) 149, 212, 1595, 3098
BtsI GCAGTG 4 cut(s) 1197, 2935, 3167, 3298
BveI ACCTGC 2 cut(s) 74, 1922
Cac8I GCNNGC 2 cut(s) 615, 3585
CaiI CAGNNNCTG 8 cut(s) 269, 757, 1696, 1937, 2567, 4586, 4919, 5345
CfoI GCGC 2 cut(s) 4417, 5437
Cfr13I GGNCC 7 cut(s) 157, 158, 644, 1415, 1934, 3323, 3806
CseI GACGC 7 cut(s) 1164, 3024, 3536, 3809, 4830, 5028, 5127
Csp6I GTAC 8 cut(s) 680, 699, 741, 1058, 2318, 2849, 2918, 3137
CviQI GTAC 8 cut(s) 680, 699, 741, 1058, 2318, 2849, 2918, 3137
DrdI GACNNNNNNGTC 1 cut(s) 3898
DseDI GACNNNNNNGTC 1 cut(s) 3898
EaeI YGGCCR 3 cut(s) 1089, 2949, 3719
Eam1104I CTCTTC 3 cut(s) 333, 499, 3931
EarI CTCTTC 3 cut(s) 333, 499, 3931
Eco130I CCWWGG 8 cut(s) 153, 423, 1179, 1377, 1527, 1710, 3285, 5271
Eco24I GRGCYC 2 cut(s) 161, 4872
Eco31I GGTCTC 2 cut(s) 275, 4460
Eco32I GATATC 1 cut(s) 2097
Eco47I GGWCC 3 cut(s) 644, 1934, 3806
Eco47III AGCGCT 1 cut(s) 4416
Eco72I CACGTG 1 cut(s) 32
Eco81I CCTNAGG 2 cut(s) 3630, 3954
Eco91I GGTNACC 1 cut(s) 1531
EcoNI CCTNNNNNAGG 2 cut(s) 165, 188
EcoO109I RGGNCCY 4 cut(s) 158, 1934, 3323, 3806
EcoO65I GGTNACC 1 cut(s) 1531
EcoRI GAATTC 1 cut(s) 3211
EcoRII CCWGG 5 cut(s) 1576, 2037, 2911, 3139, 4092
EcoRV GATATC 1 cut(s) 2097
EcoT14I CCWWGG 8 cut(s) 153, 423, 1179, 1377, 1527, 1710, 3285, 5271
EcoT22I ATGCAT 4 cut(s) 2029, 2590, 2631, 3073
EcoT38I GRGCYC 2 cut(s) 161, 4872
ErhI CCWWGG 8 cut(s) 153, 423, 1179, 1377, 1527, 1710, 3285, 5271
Esp3I CGTCTC 6 cut(s) 2192, 4656, 4848, 5046, 5145, 5375
FaqI GGGAC 3 cut(s) 945, 1594, 3727
FauI CCCGC 1 cut(s) 3796
FbaI TGATCA 2 cut(s) 1354, 3262
FblI GTMKAC 1 cut(s) 1242
FokI GGATG 4 cut(s) 136, 199, 1602, 3085
FriOI GRGCYC 2 cut(s) 161, 4872
GlaI GCGC 2 cut(s) 4416, 5436
GsaI CCCAGC 1 cut(s) 632
HaeII RGCGCY 1 cut(s) 4418
HaeIII GGCC 6 cut(s) 159, 1091, 1417, 2951, 3325, 3721
HgaI GACGC 7 cut(s) 1164, 3024, 3536, 3809, 4830, 5028, 5127
HhaI GCGC 2 cut(s) 4417, 5437
Hin1I GRCGYC 2 cut(s) 5039, 5138
Hin6I GCGC 2 cut(s) 4415, 5435
HinP1I GCGC 2 cut(s) 4415, 5435
HincII GTYRAC 4 cut(s) 118, 2005, 3282, 4975
HindII GTYRAC 4 cut(s) 118, 2005, 3282, 4975
HindIII AAGCTT 1 cut(s) 3696
HpaI GTTAAC 3 cut(s) 118, 2005, 4975
Hpy99I CGWCG 2 cut(s) 600, 5480
HpyF10VI GCNNNNNNNGC 6 cut(s) 332, 1469, 1559, 2486, 3041, 4423
Hsp92I GRCGYC 2 cut(s) 5039, 5138
HspAI GCGC 2 cut(s) 4415, 5435
Kpn2I TCCGGA 1 cut(s) 1484
Ksp22I TGATCA 2 cut(s) 1354, 3262
KspAI GTTAAC 3 cut(s) 118, 2005, 4975
LguI GCTCTTC 1 cut(s) 333
LmnI GCTCC 9 cut(s) 36, 622, 1598, 1808, 1952, 2747, 3656, 4709, 4867
MfeI CAATTG 1 cut(s) 888
MflI RGATCY 4 cut(s) 658, 905, 1289, 3022
MhlI GDGCHC 8 cut(s) 161, 840, 2752, 3486, 4714, 4872, 5403, 5494
MlsI TGGCCA 2 cut(s) 2951, 3721
MluNI TGGCCA 2 cut(s) 2951, 3721
Mox20I TGGCCA 2 cut(s) 2951, 3721
Mph1103I ATGCAT 4 cut(s) 2029, 2590, 2631, 3073
MroI TCCGGA 1 cut(s) 1484
MroXI GAANNNNTTC 3 cut(s) 571, 2490, 4377
MscI TGGCCA 2 cut(s) 2951, 3721
MslI CAYNNNNRTG 4 cut(s) 50, 453, 4356, 5414
Msp20I TGGCCA 2 cut(s) 2951, 3721
MspA1I CMGCKG 4 cut(s) 266, 632, 1298, 3194
MspR9I CCNGG 6 cut(s) 411, 1578, 2039, 2913, 3141, 4094
MunI CAATTG 1 cut(s) 888
Mva1269I GAATGC 3 cut(s) 1177, 1403, 3037
MvaI CCWGG 5 cut(s) 1578, 2039, 2913, 3141, 4094
MvnI CGCG 2 cut(s) 3575, 3803
MwoI GCNNNNNNNGC 6 cut(s) 332, 1469, 1559, 2486, 3041, 4423
NciI CCSGG 1 cut(s) 411
NcoI CCATGG 5 cut(s) 153, 423, 1377, 1710, 3285
NmuCI GTSAC 8 cut(s) 759, 1599, 1864, 3394, 3524, 3769, 4518, 5217
NsiI ATGCAT 4 cut(s) 2029, 2590, 2631, 3073
NspI RCATGY 5 cut(s) 767, 1122, 2544, 2629, 2982
NspV TTCGAA 2 cut(s) 565, 1169
PaqCI CACCTGC 1 cut(s) 74
PciI ACATGT 2 cut(s) 763, 2540
PciSI GCTCTTC 1 cut(s) 333
PctI GAATGC 3 cut(s) 1177, 1403, 3037
PdmI GAANNNNTTC 3 cut(s) 571, 2490, 4377
PflMI CCANNNNNTGG 2 cut(s) 1105, 2965
PmaCI CACGTG 1 cut(s) 32
PmlI CACGTG 1 cut(s) 32
Ppu21I YACGTR 1 cut(s) 32
PpuMI RGGWCCY 2 cut(s) 1934, 3806
PscI ACATGT 2 cut(s) 763, 2540
PshAI GACNNNNGTC 1 cut(s) 3804
Psp5II RGGWCCY 2 cut(s) 1934, 3806
Psp6I CCWGG 5 cut(s) 1576, 2037, 2911, 3139, 4092
PspCI CACGTG 1 cut(s) 32
PspEI GGTNACC 1 cut(s) 1531
PspFI CCCAGC 1 cut(s) 628
PspGI CCWGG 5 cut(s) 1576, 2037, 2911, 3139, 4092
PspOMI GGGCCC 1 cut(s) 157
PspPI GGNCC 7 cut(s) 157, 158, 644, 1415, 1934, 3323, 3806
PspPPI RGGWCCY 2 cut(s) 1934, 3806
PstI CTGCAG 1 cut(s) 3174
PstNI CAGNNNCTG 8 cut(s) 269, 757, 1696, 1937, 2567, 4586, 4919, 5345
PsuI RGATCY 4 cut(s) 658, 905, 1289, 3022
PvuII CAGCTG 4 cut(s) 266, 632, 1298, 3194
RsaI GTAC 8 cut(s) 681, 700, 742, 1059, 2319, 2850, 2919, 3138
RsaNI GTAC 8 cut(s) 680, 699, 741, 1058, 2318, 2849, 2918, 3137
RseI CAYNNNNRTG 4 cut(s) 50, 453, 4356, 5414
SapI GCTCTTC 1 cut(s) 333
Sau96I GGNCC 7 cut(s) 157, 158, 644, 1415, 1934, 3323, 3806
ScrFI CCNGG 6 cut(s) 411, 1578, 2039, 2913, 3141, 4094
SduI GDGCHC 8 cut(s) 161, 840, 2752, 3486, 4714, 4872, 5403, 5494
SfcI CTRYAG 5 cut(s) 1752, 1794, 1938, 3170, 4920
SfuI TTCGAA 2 cut(s) 565, 1169
SinI GGWCC 3 cut(s) 644, 1934, 3806
SmiMI CAYNNNNRTG 4 cut(s) 50, 453, 4356, 5414
SmlI CTYRAG 4 cut(s) 1537, 1998, 3870, 5333
SmoI CTYRAG 4 cut(s) 1537, 1998, 3870, 5333
SsiI CCGC 5 cut(s) 1425, 3575, 3587, 3803, 5495
StyD4I CCNGG 6 cut(s) 409, 1576, 2037, 2911, 3139, 4092
StyI CCWWGG 8 cut(s) 153, 423, 1179, 1377, 1527, 1710, 3285, 5271
TaqI TCGA 5 cut(s) 565, 1169, 2099, 4127, 4262
TatI WGTACW 1 cut(s) 2848
TseFI GTSAC 8 cut(s) 759, 1599, 1864, 3394, 3524, 3769, 4518, 5217
Tsp45I GTSAC 8 cut(s) 759, 1599, 1864, 3394, 3524, 3769, 4518, 5217
TspDTI ATGAA 8 cut(s) 261, 989, 1467, 2073, 3198, 3224, 3375, 3926
TspGWI ACGGA 2 cut(s) 4088, 4960
Van91I CCANNNNNTGG 2 cut(s) 1105, 2965
VpaK11BI GGWCC 3 cut(s) 644, 1934, 3806
XagI CCTNNNNNAGG 2 cut(s) 165, 188
XbaI TCTAGA 1 cut(s) 3829
XceI RCATGY 5 cut(s) 767, 1122, 2544, 2629, 2982
XmiI GTMKAC 1 cut(s) 1242
XmnI GAANNNNTTC 3 cut(s) 571, 2490, 4377
Zsp2I ATGCAT 4 cut(s) 2029, 2590, 2631, 3073
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.