Rmu_sc0009146.1_g000001
NAC Family

Chromatin structure-remodeling complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009146.1
OG0001231
Physical Location & Seq
Forward (+)
1537 .. 22292
20756 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009146.1_g000001.1.cds

Sequence Viewer

Length: 11430 bp
atggcagctccgtcacataatgttgagttggaagcagctaagtttctgcacaagctcattcaggattctaccgatgagcccgccaaacttgccaccaagctctatgtgatactgcaacacatgaagtcgagtggcaaggaacattccatgccctatcaagtgatatcaagggccatggagactgttattaatcaacatggccttgatattgaggctttgaagtcatcacgcattcctttgtctggtggagctcaaacagggtcttctcatactgctggagttgcaaaagattccaatacgggcttggccgaaactgaggtgtcaaagatggacccattttcttcaagcagaccacctgttggacctatcagtacagggcatgactattatcaaggatctgcaactcatcgaagtagtcagtcttttgatcatgaaagtccatctagtttagactcgaggtctgccaattcacagtcccaagaaaggcgtgacacagcaaaccgggacaaccaggtgaatcgaaaggatggtaaaaaagccaccactaagaggaagaggggagagacttctgtacccacagaatcacaacttgacagccctcaaaatcttgatactatagacagtgtggttaatacgaggaagggaaagatgagcaaaggtgaactgccacctggtttttcaattaaaggtggtgaaaatgctaattttaatatcgttcccagtagtggtcaaatggagcactttacttcaccatctggaagcatgagaccaatggttagagtcaagcaagaagggcaacatttaatagaaaggcaggacttgaccaacagtagcaatatggaagtttcctccattcataacgcttcagctcagcagcatgctgcttccctaactcctacaaatgacattatgggtgtgtggagtcaaaacaaacccgggtttccttatgaaaagtctcaagtgcccaggttttcttccaatgttgtcccaggaaatgtgacagcagaaagtccaatgcagcagtcaacagctccatctcctggatcaggttcttttggcaagattcaaggaggtaattttggaactgaggttgatcttatcaaggtgagcctcctcggttcttttggcaagattcaaggaggtgtgcctggttcttcaagttcatatcaagtagcagaaccaccagcattctcaagtccaatgcactatggtggcacattgccctcaactggaaaggccatggagcatgatggtggaaatactaatatgctatctgatgcaaataaaacagtgcaggctggcaggcaaaataatgcagcagaaatgagtgtggtgagaagtacagcttctagagatactggtaaatctccagttcatgtggcctctgcatcttctggcatgcctttcaaggaacagcagttgaaacagctcagagcacagtgccttgtctttttagccttcagaaatggtttgctgccaaagaaacttcatcttgaaattgcgctcggaaatacttcacctaaagaaggtggcaatacagatgggcctcgaaaagattttgttgaccataaaggaaaagcacaatcttcaaatgagccaaataacaattctgatactagtatgccatttggaagacttaaccatgaaactgataaaagtgcagtctccagtgggaaactcttggagactgacaccttggcaaaagaatccgagagcccaaaaatggaggaaagtaatggcccacctcgagatcagtttttgcagaaagcagaagctgaaacacaacctcaagagactacagcttcactggcatgtttaactgtggcatcacagcagcctgactcaggtgcaagacgtggtttaactgttaaccctgtggaaaatatagaaactggacatttgcaagttgtacgggctaacacagcctctgctctaatgggtatgaacaagcagaactctgatataagcagctggactgggtttgggagtcaaggtgaagtttccagaggactgttacctccttctgccggtcagtctgagattgttcctgaaagaaaagataccgcacccagtcagttccaaactcttggtaacaatattttggggaatcaacatactgccaatcacccagcttcttttgcatctagagatcgttggaaaccagtatcctcaattggcaatgatcatcacccagtagttgcatcaaaggatgctcacatgttgcaaaaacatgtttccaaagaacaagtaaaggagaataacccagcttctattgattttccaccttcaccaaagtacacaatgtcagagaagtggattatggataagcagaaaaagaagctcctagatgaacaaacttggactcttaagcatcaaaaagcaagggcaaaaattgtgacatcttttcacaagttaaaggaaaatgtgagctcctctgaagatatatctgcgaaaaccaaaagtgttatagagctgaaaaaactacaactcttggaattgcaacgccgtctccggagtgactttttgaatgatttcttcaaaccaatcaatacggagatggatcgcttgaaatcttttaagaaacatagacatggcaggaggataaaacaacttgaaaagtttgagcaaaagatgaaggaagaaagacaaaagagaattcagcaaagacaaaaggaattctttggggagttagaggttcacaaggaaagactggatgatgccttcaaaattaagagagagcgctggaaaggtttcaataaatatgtaaaggagttccacaaaaggaaggaacgtatccatcgtgagaagattgataggatccaacgtgaaaagataaaccttttgaagattaatgatgtggagggttatttacgaatggtgcaggatgccaaatcagaccgtgttaagcagcttctcaaagagacagaaaaatatcttcaaaagcttggatctaagctacaagatgctaaggctttggcaagtaggtttgagcatgatatggacgaaagtggaaatgcaagtgttgtagacaagagtgaacctagtttggaaaatgaagatgaaagtgaccaggcgaagcattacttggagagcaatgagaaatactatttgatggctcatagtataaaggagaacattgcagagcagccgtcttatgttaagggtgggaaattgagagagtaccaaatgaatggcttaaggtggttggtgtcactgtacaacaatcatttgaatggtattcttgctgatgaaatgggcctaggtaaaactgttcaggttatatctttaatctgttacctgatggaagcaaaaaatgatcgaggaccttttctagtggttgtgccttcttcggttttaccaggatgggaaacagaaattaacttttgggcccctactattaataggattgtttattccgggcccccagaggagaggcgtaggctatttaaggaaagaatagttcaacagaaatttaatgtcctccttactacgtatgagtatctgatgaataagcatgacagacctaaactgagcaaaatccactggcattatataataattgatgaaggccatcgcataaagaatgcttcctgcaagttaaatgctgacttgaagcattatcagagttctcacagattgctgttaactggaactccactacagaataatcttgaggagttgtgggcgctactaaacttcttgttgcctaatatatttaattcatctgaagatttttctcagtggttcaacaaaccatttgaaagtagtggtgatagctcagctgatcaagccttattatctgaggaggagaatctattgatcataaaccgtctccaccaagtacttcgaccttttgtccttcggaggctgaagcataaggttgagaatgaactacccgaaaagattgagagacttgtaagatgcgaggcttctggttaccagaagcttttgatgaagagggtagaggaaaatctgggttcaattactaattcaaaggcccggtcagtgcacaactctgttatggagcttcgaaatatatgcaatcatccatatctcagccagcttcatgtagaggagattgataacttaataccaaagcactatctgccaccaattataaggctttgtgggaagcttgagatgttagaccgattacttcccaagctaaaagcaacagatcatagggttcttttcttttccacaatgactaggctacttgatgtcatggaggaatatctcagctttaagcagtatcggtaccttaggttggatggacatacatctggtagtgatcgtggttcccttattgataatttcaataaaccagattctccctttttcatatttcttctcagcattcgggctggtggtgttggtgtaaatcttcaagctgcagatacggtgataatatttgacacggactggaatccacaggttgatttgcaagcacaggcaagggctcatagacttggtcagaagagggatgttcttgttcttcgatttgaaacggtccaaactgttgaagaacaagtcagagctgcagctgagcacaaactgggagttgctaatcagagcattactgctggtttctttgacaacaatacaagtgcggaagatcgaagagaatatttggagtcacttttgcgtgagaataagaaagaggaagctgcacctgtattggatgatgatgctttaaatgatctcttagctcgcagtgagtcagaaattgatgtctttgaatcagtggacaaaagaaggcgagaggaagaaatggcatcatggaggaagttagcatgtgtacaagggaaggatggttttgaatctctgcctcccttgccttctcggcttgtgacagaggatgacttgaaggagttctatgaagcgatgaagatatatgaggtgccaaagacaggtgtagtttctaatgttgggataaagcggaagggtcagtctctggggggacttgatactcaacgatatggaaggggaaagcgggctagagaggttcgctcatatgaagagcaatggacggaagaggaatttgaaaagttgtgtcaggctgagtcccctgattcccctgaaaaagtaaaggaagaagttacagagtcaaacttaccgaaagatgaaagtggctctgtggtggctgttagtagaactgaacttcctgctccacctccaccagacttaccactaccatctgttgagctgccacaacaaagtaaagaggtaaccccaccagctaaacgaggccgtggcaggccaaaaagagcaacagtagatcaagcaccaactgcagttgttcatacagcgcctgttggaacagtcaaagtggatacagggttagagataggaccggtgactagctgtgtaacaaactcagccccagattcagtacctgattctggtgaaattgagggtattggtggagttgcaggaagtaccgatctcgtggcctcacctagatctcttccaacagctcctaagccttccgtttttgttactcctccctcccaattgactactattagcccttctgcacccacacaagtaagaggaaagggtcggaaaactaagagtggacaggaagcaccccggcgtaggggaaagaaacaggtggaagtatctcctggttctgattcaaaacaaattgagctttcacagaagacatctgttgatccgttggaaaatgaaaccattggcatgagtgaaactgtttctgcagcccagagtcctgcttctggtgctttaaaaggtgcagaaggggtcgatcatcaatctggcattgtaatggttttgagttctcagtccacccgccttgtccctgctgttgctcctttatctcaaccttccccttccccaactgtaccagtgaaaatgaaaccacaaaaccggatggctcaaagtggtgttggagctccccgccgtagggggaagaaactggtgccagcatcacctgctgttactgatgcgctggttggccctgatttgacaccaaatatgcttccactggacaaatcaggggattcatgtgggagcaaagacatagacatgagaagtaagcaagaggctgatgttttagcaggtgaggatataaattcaactccaaattcagttaacttggcccaagttaagcagactacaaactcatccatgggccctgcatcaggagaaagtccaaacctaaaagaggctttgcctgaaaattgctcatccaaacctaagaatgacaagatttcaggagatgaaggttctaccacaccagctgctgtatcaaatgagaccatttcagaggtgaataaaagtcatactctggaggagaaagctcttccagcaattccaactttgatcgctgcatctcctgtttttaatccttcaactggttcccttcccagttctactcccatggaaagcactggtgaggcaaaacatcatggtgctgagatttctcctagctctcagtcaaagctgtcctcttctgtttctcctgcttctcagtctatcactcctagcccttccaaacctgtggaagtcaaaaaacagggtcgaaaggcttcaagcagagctgaagcaccccgtcgcaggggaaagaagcaggctcctgtgttcccagctgtttctggtggtccagctagtcaggatccagaattaagttttcaggtacaggatatgtctgttggtacattggggagtaagactgctgaactgggaagaaagcatggtactgatgggcaggaactgtcacatgttattcaatcccagacaagtcaagtgcatttagttagcagtttaactgattctgatccaaaaagaaaagagcacccaagctatcctacccaaaataagcagcctacaaactcatcatcaacaattgacagtgctgcgggatcctctgataagagttctgctctgggacgtatccagactgctaacgtaaacgatgttgctcgtgtgatgaaagaggtcttttctggcacacgtctatcaaaagctaaaatttcagagtcttttgggagagaaggtcgtggttctccccgtgtacctgtatccagtaagactccggtggacatggccgaaaagcaaaatctggaggataaagcatgttctggtgtggaattgaaggtttctgaacctgagatgggtgatctttcgaatgcgtccaaggttggtgcagtggttgttccagaaaacattacctctttagcaactgaaggaaaaaaggtagactgcatacctgttggcagcttagtaacactggagagttcaaaaggatctccagctgaaaaggattctttgatggcttcctacaatgcttctgggagagtggcagaaattgatcagcctgtggttacattgaccatgggcagtgatagtgttgaatgctcatctgaggcagggcctgtgggcagtcttaaatcacaggagtcagaacatgaagctagagctagtgatgcttttcaggtttccggaacactgccagaaaatgtgtctggaaacatggatcagcccttggtaaccttgagcaaggagtgtgctagtgttgcagccttgtctgagccagggactctaggatgctccaagttaccagaggagtcgggctgtgaagctaaagttggtgatacttctcagatttgtggaatgctgccagaaaatgtttctggaaaaatggatcagtctctggttactttgaccataggaggtgatagtgttgtaggcttatctgaggcacaacctatagacagctccaagcaaccagaggagttagaatgtgcagctaaagttgttgaaacttctcaggtttgtgtgacaagcgtagatcaccctccaattaccttgactatggggggtgatagtgttgaaggctctgaggcaggtcctgtaggtagctccaaacctccagaggaggtggaatgtgaggctaaagttggtagaacttctcaagttaacgaaccaatgccggaaaatgcatctgaaaacctggatttccagccctcttatgaagctaaagttggtgatgtttctgaggtttgtgagatatcgacagaagttgtgcctgaaaacatggatttgcagccatcttcaacagggcaggagtcggaatctgaagctacatttggtgttgcttctcaggtttgcaagacggtgttggacattgtatctgaaaacatggagttgcagccatcttcaacagtgcaacagttgaaatctgaagacaaagttgatgcctctcaggtttgtgagacagtgttggaattcgtacctgagaaaatggatttgcagccatcttcaacagtgcaggagtcggaatctgaagctagaggtggtgaggcttctcaggttagcaaaacattgctggagtctggaaacatggatttgcagacatcggcaacagcacacgactcagtatctgaagctaaagctggtgaggcgtttcagtttagtgaaacattgctagagtctgaaaacatggatttgcaaacatgttcaacagcacaggaatcagaatctgaagcaaaagtttgtgagacattgtcggagtctgaaaacatggatttgcagccatcttcaggagcacaagtgtctgaagctgatgttgaagtgggtgatgtttctccggtttgtgagacattgccggagtctgaaaacatggatttgcaaccatcttcaactgtacaggagtctgaagctgaagctaacatttctgaatcttttgggagggaatgtagtgtttcccctggtgtacctgtatccagtgagactccagtggacatggccaaaaaccaaaatttggaggataaagcatgttctggtgtggaattgaaggtttctgaaactgagatgggagatcttttgaatgcgtccgaggctgacaaggtggttgttccagaaaatgcatcttcagaaaacattgatttttctgcatcctccttagcaaacaaaggaaagaaggttgattgctttcccagaggttctgttggcagctcagtaacactgcagagatcaaatgaatctccagctgaaaaggatttgatgaattcttatgatgcttttgggagagtggcagaaattgaatctgaaaacattgatcagcctcccgttacgttgaccatgggcagtgatagtgttgaaggctcatctgaggcagggcctttaggcagtctcaaatcacaggagtcagagcatgaatgtaaagttagtgatgcttttcaggtttctgtgacattgccagaaaatgtgtctggaaacatggatcagcctttgattactttgagcaatgggtgtgatactgttaaagccttatctgtgcccaagtcttctgacgagtcggactgtaaagctaaagttggtgacgcttctcagatttgtgcaacgctgccagaaattttttcttgtaacacggatcagcctgcggttactttgaccattggaggtaatagtgttgcagacttacctgaggcacaacctatcggcagctccaagccaccagaggagttagaatgtgaagttaaagtcgttgaagcttttcagatttgtgggacatggccagaaaatacttctgaaagcatggatcagcctccagctacattgaccgtgacatgtgatagtgttgaagcctcatttgacgcgggtcctgtaagaagccccaaacctctagaggagatggagtgtgaggccaaagtcggtgatgcttctcaagtttgtgagtcattgccgacaaatgtgtctgaaaacatgaatttccagccctcttctgacgctaaaattggtgataatcctgaggtttttgagacattgacagaagttgaaaacatggatttgcagccatcttcaatggtgcaggagtcggaatctgaagctatagtaggtgatgcttctgaggttggtgagacattgacggaagttgtgcttgaaaacctggatttgcagccatcttcaacagtgcaggagtcgaaatctgaagctaaatttggtgatgcttctaacatttgtgagacatttttgggatttgtgcctgaaaacatggattcacagccatcttcaagagtgcaggagttggagtctgacactaaagttggtgatacatcgacagaaattgtgcatgaaaaaatggatatgcagccatcttcaacagtgcaggagttggaatctgaagctaaagttggtgatgcttctcatgtttgtgagacagtgttggaatttgttcctgaaaacatggatttgcagccatcttcaacagcgctggagttgcaatgtgaagctaaatttggtgttacttctgaggtttgtgagaccataacagaaattgtatctgaaaacatggatttgcagccatcttcaatgtcacctgagtcggaatctaaagctaaagttggtgaggctcaggtttgtgagacattgccagagtctgaaaatatggatttgcagccatcttcaactgcactggaatctgaagctaaagttggtgatacatctccggtttgtgagacatcgccggagtccaaaaacatggatttgcagccatcttcaggagcacaggattctgaagctgatgctaaagtgggtgatgtttctcaggtttgtgagacattgctggagtctgataacgtggatttgcagccatcttcttcaactgcgcatgaatctgaagcgaaagttagtgatgcatctcaggtttgtgagacatcgccggagcccaaaaacatggatttgcagccatctccgacagcagaggagtcagaatctgaagataaagttggtgatgtgtctcaggtttgtgagacattgccggagtccgttaacatggatgtgcagccatgttcgacagcacatgagttggaatctgaagctaaagttggtgaggcgtctcaggtttgtgagacattgccagagtctgtaaacatggatttgcagccatgttcgacagcatatgagtcggaatctgaagtgaaagttggtgaggcgtctcaggtttgtgagacattgccggagtcagaaaacatggatttgacattgcgagagtctgggaacatggatttgcagtcaccttcagcagcacatgagtctgaatctgaagctaaaattggtgatgattccaaggttcgtgagacattgccggagtctgacaacatggatttgcagccatcttcaacagcacttgagtcagaatctgaagctaaaggtggtgaggcttctcaggtttgtgagacactgccagagtctgagaacatggatttgcaaccatcttcaagagctcaggaatctgaaactgaagctaaagaaggtgatgtttctcaggtttgtgagacgttgctaggaaatgtgcccaaaaacatggatatgccaccattggcaacagcgcaggaggttgaagacgtgaagttatcatctgaggaacccgtcggtagctcaggggcaccgcctaaagctgagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000166 GO:0000228 GO:0000785 GO:0000790 GO:0000988 GO:0000990 GO:0000991 GO:0002831 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005829 GO:0006139 GO:0006325 GO:0006338 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0006996 GO:0007275 GO:0008026 GO:0008094 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009611 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009966 GO:0009987 GO:0010104 GO:0010199 GO:0010467 GO:0010468 GO:0010556 GO:0010646 GO:0010959 GO:0016043 GO:0016070 GO:0016462 GO:0016514 GO:0016586 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022414 GO:0023051 GO:0030554 GO:0031323 GO:0031326 GO:0031347 GO:0031974 GO:0031981 GO:0032101 GO:0032392 GO:0032501 GO:0032502 GO:0032508 GO:0032553 GO:0032555 GO:0032559 GO:0032774 GO:0032879 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0034756 GO:0035639 GO:0036094 GO:0040029 GO:0042623 GO:0043044 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043269 GO:0043900 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048367 GO:0048583 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048859 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0070035 GO:0070297 GO:0070603 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0090304 GO:0090567 GO:0090691 GO:0097159 GO:0097367 GO:0097659 GO:0140097 GO:0140110 GO:1900150 GO:1900390 GO:1900393 GO:1900400 GO:1901265 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902494 GO:1902531 GO:1903506 GO:1904949 GO:2000022 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04714 ko05225 map04714 map05225
Pfam Domains
Protein Families
Helicase_C SNF2_N SnAC

Protein Analysis

3809

Amino Acids

412.58

Weight (kDa)

4.91

Isoelectric Point (pI)

58.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 4118
AarI CACCTGC 2 cut(s) 5962, 6071
AasI GACNNNNNNGTC 1 cut(s) 9718
Acc16I TGCGCA 1 cut(s) 10632
Acc36I ACCTGC 3 cut(s) 5962, 6071, 7859
Acc65I GGTACC 1 cut(s) 4257
AccB1I GGYRCC 4 cut(s) 4257, 4900, 5941, 11410
AccB7I CCANNNNNTGG 3 cut(s) 359, 1040, 8785
AccI GTMKAC 2 cut(s) 3027, 7221
AccII CGCG 1 cut(s) 9623
AccIII TCCGGA 2 cut(s) 2511, 7463
AcoI YGGCCR 4 cut(s) 306, 7068, 8769, 9539
AcyI GRCGYC 2 cut(s) 10859, 10958
AfeI AGCGCT 2 cut(s) 2741, 10236
AflII CTTAAG 2 cut(s) 2366, 3196
AflIII ACRYGT 6 cut(s) 2217, 2230, 6742, 6974, 8477, 9593
AgeI ACCGGT 1 cut(s) 5353
AhdI GACNNNNNGTC 2 cut(s) 457, 3854
AhlI ACTAGT 1 cut(s) 1616
AjiI CACGTC 3 cut(s) 1856, 6977, 11371
AleI CACNNNNGTG 1 cut(s) 1209
AloI GAACNNNNNNTCC 2 cut(s) 5146, 5178
Alw44I GTGCAC 1 cut(s) 4007
Ama87I CYCGRG 3 cut(s) 454, 935, 1746
Aor13HI TCCGGA 2 cut(s) 2511, 7463
Aor51HI AGCGCT 2 cut(s) 2741, 10236
ApaI GGGCCC 3 cut(s) 3391, 3423, 6158
ApaLI GTGCAC 1 cut(s) 4007
ArsI GACNNNNNNTTYG 2 cut(s) 3986, 4018
AseI ATTAAT 3 cut(s) 189, 2850, 3399
AsiGI ACCGGT 1 cut(s) 5353
Asp700I GAANNNNTTC 7 cut(s) 1513, 2531, 2750, 4871, 6550, 9519, 10197
Asp718I GGTACC 1 cut(s) 4257
AspA2I CCTAGG 1 cut(s) 3259
AspLEI GCGC 8 cut(s) 1504, 2742, 3688, 5311, 5971, 10237, 10633, 11356
AsuC2I CCSGG 6 cut(s) 503, 936, 937, 3418, 4000, 5593
AsuII TTCGAA 2 cut(s) 4030, 7148
AvaI CYCGRG 3 cut(s) 454, 935, 1746
AvaII GGWCC 8 cut(s) 331, 362, 3323, 4510, 5351, 6623, 7871, 9626
AvrII CCTAGG 1 cut(s) 3259
AxyI CCTNAGG 3 cut(s) 4262, 9450, 9774
BaeGI GKGCMC 8 cut(s) 966, 3391, 3423, 4011, 6158, 9306, 11322, 11413
BaeI ACNNNNGTAYC 2 cut(s) 555, 588
BalI TGGCCA 2 cut(s) 8771, 9541
BamHI GGATCC 3 cut(s) 2817, 6637, 6884
BanI GGYRCC 4 cut(s) 4257, 4900, 5941, 11410
BauI CACGAG 2 cut(s) 5447, 6945
BbsI GAAGAC 6 cut(s) 255, 1639, 5669, 8214, 9303, 11373
BceAI ACGGC 4 cut(s) 2490, 3133, 5235, 5907
BcgI CGANNNNNNTGC 4 cut(s) 4020, 4054, 10911, 10945
BciVI GTATCC 6 cut(s) 2176, 2804, 5326, 6926, 7054, 8755
BclI TGATCA 6 cut(s) 427, 2182, 3784, 3819, 7333, 9082
BcnI CCSGG 6 cut(s) 503, 936, 937, 3418, 4000, 5593
BcuI ACTAGT 1 cut(s) 1616
BfoI RGCGCY 4 cut(s) 2743, 3689, 5312, 10238
BfrI CTTAAG 2 cut(s) 2366, 3196
BfuAI ACCTGC 3 cut(s) 5962, 6071, 7859
BfuI GTATCC 6 cut(s) 2176, 2804, 5326, 6926, 7054, 8755
BglI GCCNNNNNGGC 1 cut(s) 4843
BglII AGATCT 2 cut(s) 5462, 8842
BlnI CCTAGG 1 cut(s) 3259
BlpI GCTNAGC 3 cut(s) 870, 3778, 4545
BmcAI AGTACT 1 cut(s) 3843
Bme18I GGWCC 8 cut(s) 331, 362, 3323, 4510, 5351, 6623, 7871, 9626
BmeRI GACNNNNNGTC 2 cut(s) 457, 3854
BmeT110I CYCGRG 3 cut(s) 454, 935, 1746
BmgBI CACGTC 3 cut(s) 1856, 6977, 11371
BmrI ACTGGG 7 cut(s) 714, 1986, 2064, 2186, 4565, 6384, 6713
BmuI ACTGGG 7 cut(s) 714, 1986, 2064, 2186, 4565, 6384, 6713
BoxI GACNNNNGTC 1 cut(s) 9624
BpiI GAAGAC 6 cut(s) 255, 1639, 5669, 8214, 9303, 11373
BplI GAGNNNNNCTC 4 cut(s) 4994, 5026, 6889, 6921
Bpu10I CCTNAGC 6 cut(s) 2967, 5481, 8926, 10377, 11250, 11404
Bpu1102I GCTNAGC 3 cut(s) 870, 3778, 4545
Bpu14I TTCGAA 2 cut(s) 4030, 7148
BpuEI CTTGAG 9 cut(s) 942, 1177, 1773, 3692, 4157, 7537, 7920, 9675, 11174
BpuMI CCSGG 6 cut(s) 503, 936, 937, 3418, 4000, 5593
BsaAI YACGTR 1 cut(s) 3492
BsaBI GATNNNNATC 1 cut(s) 6798
BsaHI GRCGYC 2 cut(s) 10859, 10958
BsaI GGTCTC 3 cut(s) 760, 6272, 10280
BsaWI WCCGGW 7 cut(s) 2511, 5353, 5889, 7057, 7463, 8611, 10471
Bse118I RCCGGY 2 cut(s) 2027, 5353
Bse21I CCTNAGG 3 cut(s) 4262, 9450, 9774
Bse8I GATNNNNATC 1 cut(s) 6798
BseAI TCCGGA 2 cut(s) 2511, 7463
BseJI GATNNNNATC 1 cut(s) 6798
BseSI GKGCMC 8 cut(s) 966, 3391, 3423, 4011, 6158, 9306, 11322, 11413
BseYI CCCAGC 3 cut(s) 2128, 2263, 6607
Bsh1236I CGCG 1 cut(s) 9623
BshNI GGYRCC 4 cut(s) 4257, 4900, 5941, 11410
BshTI ACCGGT 1 cut(s) 5353
BsiHKCI CYCGRG 3 cut(s) 454, 935, 1746
BslFI GGGAC 9 cut(s) 460, 518, 971, 4974, 5050, 5804, 6924, 7573, 9547
BsmBI CGTCTC 5 cut(s) 2513, 3836, 10866, 10965, 11294
BsmFI GGGAC 9 cut(s) 460, 518, 971, 4974, 5050, 5804, 6924, 7573, 9547
BsmI GAATGC 8 cut(s) 231, 1187, 3589, 4356, 7156, 7382, 7641, 8857
Bso31I GGTCTC 3 cut(s) 760, 6272, 10280
BsoBI CYCGRG 3 cut(s) 454, 935, 1746
Bsp119I TTCGAA 2 cut(s) 4030, 7148
Bsp120I GGGCCC 3 cut(s) 3387, 3419, 6154
Bsp13I TCCGGA 2 cut(s) 2511, 7463
Bsp1407I TGTACA 3 cut(s) 3216, 4798, 8668
Bsp1720I GCTNAGC 3 cut(s) 870, 3778, 4545
Bsp19I CCATGG 6 cut(s) 174, 1239, 6150, 6402, 7356, 9105
BspEI TCCGGA 2 cut(s) 2511, 7463
BspFNI CGCG 1 cut(s) 9623
BspHI TCATGA 1 cut(s) 430
BspMAI CTGCAG 5 cut(s) 4396, 4543, 5296, 5722, 8994
BspMI ACCTGC 3 cut(s) 5962, 6071, 7859
BspQI GCTCTTC 2 cut(s) 5013, 6330
BspT104I TTCGAA 2 cut(s) 4030, 7148
BspT107I GGYRCC 4 cut(s) 4257, 4900, 5941, 11410
BspTI CTTAAG 2 cut(s) 2366, 3196
BspTNI GGTCTC 3 cut(s) 760, 6272, 10280
BsrFI RCCGGY 2 cut(s) 2027, 5353
BsrGI TGTACA 3 cut(s) 3216, 4798, 8668
BssAI RCCGGY 2 cut(s) 2027, 5353
BssNI GRCGYC 2 cut(s) 10859, 10958
BssSI CACGAG 2 cut(s) 5447, 6945
Bst2BI CACGAG 2 cut(s) 5447, 6945
BstACI GRCGYC 2 cut(s) 10859, 10958
BstAFI CTTAAG 2 cut(s) 2366, 3196
BstAPI GCANNNNNTGC 3 cut(s) 4105, 5291, 5954
BstAUI TGTACA 3 cut(s) 3216, 4798, 8668
BstBAI YACGTR 1 cut(s) 3492
BstBI TTCGAA 2 cut(s) 4030, 7148
BstDSI CCRYGG 7 cut(s) 174, 1239, 5251, 6150, 6402, 7356, 9105
BstEII GGTNACC 3 cut(s) 3935, 5227, 7510
BstENI CCTNNNNNAGG 5 cut(s) 1044, 1524, 1842, 6162, 6185
BstFNI CGCG 1 cut(s) 9623
BstH2I RGCGCY 4 cut(s) 2743, 3689, 5312, 10238
BstHHI GCGC 8 cut(s) 1504, 2742, 3688, 5311, 5971, 10237, 10633, 11356
BstPAI GACNNNNGTC 1 cut(s) 9624
BstPI GGTNACC 3 cut(s) 3935, 5227, 7510
BstSLI GKGCMC 8 cut(s) 966, 3391, 3423, 4011, 6158, 9306, 11322, 11413
BstSNI TACGTA 1 cut(s) 3492
BstUI CGCG 1 cut(s) 9623
BstV2I GAAGAC 6 cut(s) 255, 1639, 5669, 8214, 9303, 11373
BstX2I RGATCY 8 cut(s) 395, 2817, 2948, 5462, 6637, 6884, 7268, 8842
BstXI CCANNNNNNTGG 6 cut(s) 2087, 3191, 6523, 10504, 10699, 11329
BstYI RGATCY 8 cut(s) 395, 2817, 2948, 5462, 6637, 6884, 7268, 8842
Bsu36I CCTNAGG 3 cut(s) 4262, 9450, 9774
BsuI GTATCC 6 cut(s) 2176, 2804, 5326, 6926, 7054, 8755
BtgI CCRYGG 7 cut(s) 174, 1239, 5251, 6150, 6402, 7356, 9105
BtgZI GCGATG 4 cut(s) 3557, 4898, 10470, 10665
BtrI CACGTC 3 cut(s) 1856, 6977, 11371
BtsI GCAGTG 7 cut(s) 4720, 7176, 7369, 7469, 8987, 9118, 11204
BveI ACCTGC 3 cut(s) 5962, 6071, 7859
CciI TCATGA 1 cut(s) 430
CfoI GCGC 8 cut(s) 1504, 2742, 3688, 5311, 5971, 10237, 10633, 11356
Cfr10I RCCGGY 2 cut(s) 2027, 5353
Cfr9I CCCGGG 1 cut(s) 935
CseI GACGC 7 cut(s) 7143, 8844, 9356, 9629, 9761, 10848, 10947
CsiI ACCWGGT 2 cut(s) 510, 670
CspAI ACCGGT 1 cut(s) 5353
CspCI CAANNNNNGTGG 2 cut(s) 5797, 5832
DraI TTTAAA 2 cut(s) 4695, 5748
DrdI GACNNNNNNGTC 1 cut(s) 9718
DriI GACNNNNNGTC 2 cut(s) 457, 3854
DseDI GACNNNNNNGTC 1 cut(s) 9718
EaeI YGGCCR 4 cut(s) 306, 7068, 8769, 9539
Eam1105I GACNNNNNGTC 2 cut(s) 457, 3854
Ecl136II GAGCTC 4 cut(s) 251, 2430, 5915, 11249
Eco105I TACGTA 1 cut(s) 3492
Eco31I GGTCTC 3 cut(s) 760, 6272, 10280
Eco32I GATATC 2 cut(s) 165, 8034
Eco47I GGWCC 8 cut(s) 331, 362, 3323, 4510, 5351, 6623, 7871, 9626
Eco47III AGCGCT 2 cut(s) 2741, 10236
Eco53kI GAGCTC 4 cut(s) 251, 2430, 5915, 11249
Eco81I CCTNAGG 3 cut(s) 4262, 9450, 9774
Eco88I CYCGRG 3 cut(s) 454, 935, 1746
Eco91I GGTNACC 3 cut(s) 3935, 5227, 7510
EcoICRI GAGCTC 4 cut(s) 251, 2430, 5915, 11249
EcoNI CCTNNNNNAGG 5 cut(s) 1044, 1524, 1842, 6162, 6185
EcoO109I RGGNCCY 8 cut(s) 3323, 3388, 3420, 6155, 7394, 7871, 9143, 9626
EcoO65I GGTNACC 3 cut(s) 3935, 5227, 7510
EcoRI GAATTC 4 cut(s) 2655, 2675, 8249, 9031
EcoRV GATATC 2 cut(s) 165, 8034
EcoT22I ATGCAT 3 cut(s) 7966, 8893, 10663
Esp3I CGTCTC 5 cut(s) 2513, 3836, 10866, 10965, 11294
FalI AAGNNNNNCTT 8 cut(s) 1330, 1362, 2663, 2695, 3068, 3100, 9888, 9920
FaqI GGGAC 9 cut(s) 460, 518, 971, 4974, 5050, 5804, 6924, 7573, 9547
FauI CCCGC 6 cut(s) 88, 4986, 5819, 5927, 6874, 9616
FauNDI CATATG 2 cut(s) 5014, 10924
FbaI TGATCA 6 cut(s) 427, 2182, 3784, 3819, 7333, 9082
FblI GTMKAC 2 cut(s) 3027, 7221
FspI TGCGCA 1 cut(s) 10632
GlaI GCGC 8 cut(s) 1503, 2741, 3687, 5310, 5970, 10236, 10632, 11355
GsaI CCCAGC 3 cut(s) 2132, 2267, 6611
HaeII RGCGCY 4 cut(s) 2743, 3689, 5312, 10238
HgaI GACGC 7 cut(s) 7143, 8844, 9356, 9629, 9761, 10848, 10947
HhaI GCGC 8 cut(s) 1504, 2742, 3688, 5311, 5971, 10237, 10633, 11356
Hin1I GRCGYC 2 cut(s) 10859, 10958
Hin6I GCGC 8 cut(s) 1502, 2740, 3686, 5309, 5969, 10235, 10631, 11354
HinP1I GCGC 8 cut(s) 1502, 2740, 3686, 5309, 5969, 10235, 10631, 11354
HincII GTYRAC 8 cut(s) 1026, 1564, 1870, 3645, 6115, 7942, 9102, 10795
HindII GTYRAC 8 cut(s) 1026, 1564, 1870, 3645, 6115, 7942, 9102, 10795
HindIII AAGCTT 4 cut(s) 2942, 3944, 4133, 9516
HpaI GTTAAC 5 cut(s) 1870, 3645, 6115, 7942, 10795
Hpy99I CGWCG 2 cut(s) 6579, 11399
Hsp92I GRCGYC 2 cut(s) 10859, 10958
HspAI GCGC 8 cut(s) 1502, 2740, 3686, 5309, 5969, 10235, 10631, 11354
Kpn2I TCCGGA 2 cut(s) 2511, 7463
KpnI GGTACC 1 cut(s) 4261
Ksp22I TGATCA 6 cut(s) 427, 2182, 3784, 3819, 7333, 9082
KspAI GTTAAC 5 cut(s) 1870, 3645, 6115, 7942, 10795
LguI GCTCTTC 2 cut(s) 5013, 6330
MabI ACCWGGT 2 cut(s) 510, 670
MfeI CAATTG 3 cut(s) 2172, 5513, 6867
MflI RGATCY 8 cut(s) 395, 2817, 2948, 5462, 6637, 6884, 7268, 8842
MlsI TGGCCA 2 cut(s) 8771, 9541
MluNI TGGCCA 2 cut(s) 8771, 9541
Mox20I TGGCCA 2 cut(s) 8771, 9541
Mph1103I ATGCAT 3 cut(s) 7966, 8893, 10663
MroI TCCGGA 2 cut(s) 2511, 7463
MroXI GAANNNNTTC 7 cut(s) 1513, 2531, 2750, 4871, 6550, 9519, 10197
MscI TGGCCA 2 cut(s) 8771, 9541
Msp20I TGGCCA 2 cut(s) 8771, 9541
MspA1I CMGCKG 7 cut(s) 1971, 3782, 4544, 6263, 6611, 7277, 9014
MspCI CTTAAG 2 cut(s) 2366, 3196
MunI CAATTG 3 cut(s) 2172, 5513, 6867
Mva1269I GAATGC 8 cut(s) 231, 1187, 3589, 4356, 7156, 7382, 7641, 8857
MvnI CGCG 1 cut(s) 9623
NciI CCSGG 6 cut(s) 503, 936, 937, 3418, 4000, 5593
NcoI CCATGG 6 cut(s) 174, 1239, 6150, 6402, 7356, 9105
NdeI CATATG 2 cut(s) 5014, 10924
NmeAIII GCCGAG 1 cut(s) 4822
NsbI TGCGCA 1 cut(s) 10632
NsiI ATGCAT 3 cut(s) 7966, 8893, 10663
NspV TTCGAA 2 cut(s) 4030, 7148
OliI CACNNNNGTG 1 cut(s) 1209
PaeI GCATGC 2 cut(s) 881, 1402
PaeR7I CTCGAG 2 cut(s) 454, 1746
PagI TCATGA 1 cut(s) 430
PaqCI CACCTGC 2 cut(s) 5962, 6071
PciI ACATGT 5 cut(s) 2217, 2230, 6742, 8477, 9593
PciSI GCTCTTC 2 cut(s) 5013, 6330
PcsI WCGNNNNNNNCGW 1 cut(s) 2797
PctI GAATGC 8 cut(s) 231, 1187, 3589, 4356, 7156, 7382, 7641, 8857
PdmI GAANNNNTTC 7 cut(s) 1513, 2531, 2750, 4871, 6550, 9519, 10197
PflFI GACNNNGTC 2 cut(s) 4470, 8527
PflMI CCANNNNNTGG 3 cut(s) 359, 1040, 8785
PfoI TCCNGGA 1 cut(s) 1039
PinAI ACCGGT 1 cut(s) 5353
Ppu21I YACGTR 1 cut(s) 3492
PpuMI RGGWCCY 3 cut(s) 3323, 7871, 9626
PscI ACATGT 5 cut(s) 2217, 2230, 6742, 8477, 9593
PshAI GACNNNNGTC 1 cut(s) 9624
PshBI ATTAAT 3 cut(s) 189, 2850, 3399
PsiI TTATAA 1 cut(s) 4118
Psp124BI GAGCTC 4 cut(s) 253, 2432, 5917, 11251
Psp5II RGGWCCY 3 cut(s) 3323, 7871, 9626
PspEI GGTNACC 3 cut(s) 3935, 5227, 7510
PspFI CCCAGC 3 cut(s) 2128, 2263, 6607
PspOMI GGGCCC 3 cut(s) 3387, 3419, 6154
PspPPI RGGWCCY 3 cut(s) 3323, 7871, 9626
PspXI VCTCGAGB 1 cut(s) 454
PstI CTGCAG 5 cut(s) 4396, 4543, 5296, 5722, 8994
PsuI RGATCY 8 cut(s) 395, 2817, 2948, 5462, 6637, 6884, 7268, 8842
PsyI GACNNNGTC 2 cut(s) 4470, 8527
PvuII CAGCTG 7 cut(s) 1971, 3782, 4544, 6263, 6611, 7277, 9014
SacI GAGCTC 4 cut(s) 253, 2432, 5917, 11251
SapI GCTCTTC 2 cut(s) 5013, 6330
ScaI AGTACT 1 cut(s) 3843
SexAI ACCWGGT 2 cut(s) 510, 670
Sfr274I CTCGAG 2 cut(s) 454, 1746
SfuI TTCGAA 2 cut(s) 4030, 7148
SinI GGWCC 8 cut(s) 331, 362, 3323, 4510, 5351, 6623, 7871, 9626
SlaI CTCGAG 2 cut(s) 454, 1746
SmaI CCCGGG 1 cut(s) 937
SnaBI TACGTA 1 cut(s) 3492
SpeI ACTAGT 1 cut(s) 1616
SphI GCATGC 2 cut(s) 881, 1402
SspI AATATT 3 cut(s) 2098, 4410, 4628
SstI GAGCTC 4 cut(s) 253, 2432, 5917, 11251
TaqII GACCGA 1 cut(s) 4164
TatI WGTACW 7 cut(s) 371, 1340, 2295, 3216, 3841, 4798, 8668
TspGWI ACGGA 8 cut(s) 2567, 4433, 5045, 5479, 5667, 9410, 9908, 10780
TspMI CCCGGG 1 cut(s) 935
Tth111I GACNNNGTC 2 cut(s) 4470, 8527
Van91I CCANNNNNTGG 3 cut(s) 359, 1040, 8785
Vha464I CTTAAG 2 cut(s) 2366, 3196
VneI GTGCAC 1 cut(s) 4007
VpaK11BI GGWCC 8 cut(s) 331, 362, 3323, 4510, 5351, 6623, 7871, 9626
VspI ATTAAT 3 cut(s) 189, 2850, 3399
XagI CCTNNNNNAGG 5 cut(s) 1044, 1524, 1842, 6162, 6185
XbaI TCTAGA 3 cut(s) 1349, 2144, 9649
XcmI CCANNNNNNNNNTGG 1 cut(s) 301
XhoI CTCGAG 2 cut(s) 454, 1746
XmaI CCCGGG 1 cut(s) 935
XmaJI CCTAGG 1 cut(s) 3259
XmiI GTMKAC 2 cut(s) 3027, 7221
XmnI GAANNNNTTC 7 cut(s) 1513, 2531, 2750, 4871, 6550, 9519, 10197
ZrmI AGTACT 1 cut(s) 3843
Zsp2I ATGCAT 3 cut(s) 7966, 8893, 10663
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.