Chromatin structure-remodeling complex protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ResIII | PF04851 | 1040 - 1202 | 8.7e-13 | Type III restriction enzyme, res subunit |
| SNF2-rel_dom | PF00176 | 1044 - 1335 | 6.6e-91 | SNF2-related domain |
| Helicase_C | PF00271 | 1361 - 1474 | 7.4e-22 | Helicase conserved C-terminal domain |
| SnAC | PF14619 | 1569 - 1665 | 6.9e-17 | Snf2-ATP coupling, chromatin remodelling complex |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 4067 |
| AarI | CACCTGC | 2 cut(s) | 5920, 6029 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 9790 |
| Acc36I | ACCTGC | 3 cut(s) | 5920, 6029, 7817 |
| Acc65I | GGTACC | 2 cut(s) | 4206, 8212 |
| AccB1I | GGYRCC | 5 cut(s) | 4206, 4849, 5899, 8212, 11470 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 359, 1058, 7042, 8860 |
| AccBSI | CCGCTC | 1 cut(s) | 5526 |
| AccI | GTMKAC | 2 cut(s) | 2976, 7179 |
| AccII | CGCG | 4 cut(s) | 2514, 9695, 10170, 10733 |
| AccIII | TCCGGA | 2 cut(s) | 2460, 7421 |
| AclI | AACGTT | 1 cut(s) | 10053 |
| AcoI | YGGCCR | 5 cut(s) | 306, 4420, 7026, 8844, 9611 |
| AcvI | CACGTG | 1 cut(s) | 5987 |
| AcyI | GRCGYC | 2 cut(s) | 10931, 11030 |
| AfeI | AGCGCT | 2 cut(s) | 2690, 10308 |
| AflII | CTTAAG | 2 cut(s) | 2315, 3145 |
| AflIII | ACRYGT | 6 cut(s) | 1760, 2179, 6932, 8435, 9665, 10731 |
| AgeI | ACCGGT | 2 cut(s) | 5302, 5824 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 457, 3803 |
| AjiI | CACGTC | 4 cut(s) | 1805, 6935, 9666, 11431 |
| AleI | CACNNNNGTG | 1 cut(s) | 1158 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 4747, 4779, 5095, 5127 |
| Alw44I | GTGCAC | 1 cut(s) | 3956 |
| Ama87I | CYCGRG | 2 cut(s) | 454, 953 |
| Aor13HI | TCCGGA | 2 cut(s) | 2460, 7421 |
| Aor51HI | AGCGCT | 2 cut(s) | 2690, 10308 |
| ApaI | GGGCCC | 3 cut(s) | 3340, 3372, 6116 |
| ApaLI | GTGCAC | 1 cut(s) | 3956 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3935, 3967 |
| AseI | ATTAAT | 3 cut(s) | 189, 2799, 3348 |
| AsiGI | ACCGGT | 2 cut(s) | 5302, 5824 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 1462, 2480, 2699, 4820, 6508, 10269 |
| Asp718I | GGTACC | 2 cut(s) | 4206, 8212 |
| AspA2I | CCTAGG | 1 cut(s) | 3208 |
| AspLEI | GCGC | 7 cut(s) | 2691, 3637, 5260, 5929, 10170, 10309, 11416 |
| AsuC2I | CCSGG | 7 cut(s) | 503, 954, 955, 3367, 3949, 5542, 6348 |
| AsuII | TTCGAA | 2 cut(s) | 3979, 7106 |
| AvaI | CYCGRG | 2 cut(s) | 454, 953 |
| AvaII | GGWCC | 8 cut(s) | 331, 362, 3272, 4459, 5300, 6581, 7829, 9698 |
| AvrII | CCTAGG | 1 cut(s) | 3208 |
| AxyI | CCTNAGG | 3 cut(s) | 4211, 9522, 9846 |
| BaeGI | GKGCMC | 8 cut(s) | 984, 3340, 3372, 3960, 6116, 9378, 11382, 11473 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 555, 588 |
| BalI | TGGCCA | 3 cut(s) | 4422, 8846, 9613 |
| BamHI | GGATCC | 4 cut(s) | 2766, 2897, 6595, 6842 |
| BanI | GGYRCC | 5 cut(s) | 4206, 4849, 5899, 8212, 11470 |
| BauI | CACGAG | 1 cut(s) | 6903 |
| BbrPI | CACGTG | 1 cut(s) | 5987 |
| BbsI | GAAGAC | 6 cut(s) | 255, 1588, 5618, 8172, 9375, 11433 |
| BceAI | ACGGC | 4 cut(s) | 2439, 3082, 5184, 5865 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 3969, 4003, 10884, 10918, 10983, 11017 |
| BciVI | GTATCC | 7 cut(s) | 2125, 2753, 5275, 6884, 7012, 8545, 8830 |
| BclI | TGATCA | 7 cut(s) | 427, 2131, 3016, 3733, 3768, 7291, 9154 |
| BcnI | CCSGG | 7 cut(s) | 503, 954, 955, 3367, 3949, 5542, 6348 |
| BfoI | RGCGCY | 4 cut(s) | 2692, 3638, 5261, 10310 |
| BfrI | CTTAAG | 2 cut(s) | 2315, 3145 |
| BfuAI | ACCTGC | 3 cut(s) | 5920, 6029, 7817 |
| BfuI | GTATCC | 7 cut(s) | 2125, 2753, 5275, 6884, 7012, 8545, 8830 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 4792 |
| BglII | AGATCT | 2 cut(s) | 5411, 8917 |
| BlnI | CCTAGG | 1 cut(s) | 3208 |
| BlpI | GCTNAGC | 3 cut(s) | 888, 3727, 4494 |
| BmcAI | AGTACT | 2 cut(s) | 3792, 5470 |
| Bme18I | GGWCC | 8 cut(s) | 331, 362, 3272, 4459, 5300, 6581, 7829, 9698 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 457, 3803 |
| BmeT110I | CYCGRG | 2 cut(s) | 454, 953 |
| BmgBI | CACGTC | 4 cut(s) | 1805, 6935, 9666, 11431 |
| BmrI | ACTGGG | 7 cut(s) | 714, 1935, 2013, 2135, 4514, 6560, 6671 |
| BmuI | ACTGGG | 7 cut(s) | 714, 1935, 2013, 2135, 4514, 6560, 6671 |
| BoxI | GACNNNNGTC | 1 cut(s) | 9696 |
| BpiI | GAAGAC | 6 cut(s) | 255, 1588, 5618, 8172, 9375, 11433 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 4943, 4975, 6250, 6282, 6847, 6879 |
| Bpu10I | CCTNAGC | 6 cut(s) | 2916, 5430, 7156, 8998, 11322, 11464 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 888, 3727, 4494 |
| Bpu14I | TTCGAA | 2 cut(s) | 3979, 7106 |
| BpuEI | CTTGAG | 8 cut(s) | 960, 1126, 1722, 3641, 4106, 7495, 9747, 11246 |
| BpuMI | CCSGG | 7 cut(s) | 503, 954, 955, 3367, 3949, 5542, 6348 |
| BsaAI | YACGTR | 2 cut(s) | 3441, 5987 |
| BsaBI | GATNNNNATC | 2 cut(s) | 6756, 10833 |
| BsaHI | GRCGYC | 2 cut(s) | 10931, 11030 |
| BsaI | GGTCTC | 2 cut(s) | 778, 10352 |
| BsaWI | WCCGGW | 9 cut(s) | 751, 2460, 5302, 5824, 5847, 7015, 7421, 8833, 10546 |
| Bse118I | RCCGGY | 3 cut(s) | 1976, 5302, 5824 |
| Bse21I | CCTNAGG | 3 cut(s) | 4211, 9522, 9846 |
| Bse8I | GATNNNNATC | 2 cut(s) | 6756, 10833 |
| BseAI | TCCGGA | 2 cut(s) | 2460, 7421 |
| BseJI | GATNNNNATC | 2 cut(s) | 6756, 10833 |
| BseSI | GKGCMC | 8 cut(s) | 984, 3340, 3372, 3960, 6116, 9378, 11382, 11473 |
| BseYI | CCCAGC | 2 cut(s) | 2077, 2212 |
| Bsh1236I | CGCG | 4 cut(s) | 2514, 9695, 10170, 10733 |
| BshNI | GGYRCC | 5 cut(s) | 4206, 4849, 5899, 8212, 11470 |
| BshTI | ACCGGT | 2 cut(s) | 5302, 5824 |
| BsiHKCI | CYCGRG | 2 cut(s) | 454, 953 |
| BslFI | GGGAC | 9 cut(s) | 460, 518, 989, 4923, 4999, 5762, 6882, 7531, 9619 |
| BsmBI | CGTCTC | 8 cut(s) | 2462, 3376, 3785, 8087, 10740, 10938, 11037, 11354 |
| BsmFI | GGGAC | 9 cut(s) | 460, 518, 989, 4923, 4999, 5762, 6882, 7531, 9619 |
| BsmI | GAATGC | 7 cut(s) | 1136, 3538, 4305, 7114, 7340, 7599, 8932 |
| Bso31I | GGTCTC | 2 cut(s) | 778, 10352 |
| BsoBI | CYCGRG | 2 cut(s) | 454, 953 |
| Bsp119I | TTCGAA | 2 cut(s) | 3979, 7106 |
| Bsp120I | GGGCCC | 3 cut(s) | 3336, 3368, 6112 |
| Bsp13I | TCCGGA | 2 cut(s) | 2460, 7421 |
| Bsp1407I | TGTACA | 2 cut(s) | 4747, 8743 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 888, 3727, 4494 |
| Bsp19I | CCATGG | 7 cut(s) | 174, 1188, 6108, 6360, 7314, 7647, 9177 |
| BspEI | TCCGGA | 2 cut(s) | 2460, 7421 |
| BspFNI | CGCG | 4 cut(s) | 2514, 9695, 10170, 10733 |
| BspHI | TCATGA | 1 cut(s) | 430 |
| BspMAI | CTGCAG | 5 cut(s) | 4345, 4492, 5245, 5680, 9066 |
| BspMI | ACCTGC | 3 cut(s) | 5920, 6029, 7817 |
| BspQI | GCTCTTC | 2 cut(s) | 4962, 6288 |
| BspT104I | TTCGAA | 2 cut(s) | 3979, 7106 |
| BspT107I | GGYRCC | 5 cut(s) | 4206, 4849, 5899, 8212, 11470 |
| BspTI | CTTAAG | 2 cut(s) | 2315, 3145 |
| BspTNI | GGTCTC | 2 cut(s) | 778, 10352 |
| BsrBI | CCGCTC | 1 cut(s) | 5526 |
| BsrFI | RCCGGY | 3 cut(s) | 1976, 5302, 5824 |
| BsrGI | TGTACA | 2 cut(s) | 4747, 8743 |
| BssAI | RCCGGY | 3 cut(s) | 1976, 5302, 5824 |
| BssNI | GRCGYC | 2 cut(s) | 10931, 11030 |
| BssSI | CACGAG | 1 cut(s) | 6903 |
| Bst2BI | CACGAG | 1 cut(s) | 6903 |
| Bst6I | CTCTTC | 9 cut(s) | 548, 3899, 4421, 4564, 4962, 4977, 6288, 6436, 9823 |
| BstACI | GRCGYC | 2 cut(s) | 10931, 11030 |
| BstAFI | CTTAAG | 2 cut(s) | 2315, 3145 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 2342, 4054, 5240, 5912 |
| BstAUI | TGTACA | 2 cut(s) | 4747, 8743 |
| BstBAI | YACGTR | 2 cut(s) | 3441, 5987 |
| BstBI | TTCGAA | 2 cut(s) | 3979, 7106 |
| BstDSI | CCRYGG | 9 cut(s) | 174, 1188, 5085, 5200, 6108, 6360, 7314, 7647, 9177 |
| BstEII | GGTNACC | 3 cut(s) | 3884, 5176, 7468 |
| BstENI | CCTNNNNNAGG | 5 cut(s) | 1062, 1473, 1791, 6120, 6143 |
| BstFNI | CGCG | 4 cut(s) | 2514, 9695, 10170, 10733 |
| BstH2I | RGCGCY | 4 cut(s) | 2692, 3638, 5261, 10310 |
| BstHHI | GCGC | 7 cut(s) | 2691, 3637, 5260, 5929, 10170, 10309, 11416 |
| BstNSI | RCATGY | 9 cut(s) | 899, 1351, 1764, 2183, 4746, 7059, 8439, 8524, 8877 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 9696 |
| BstPI | GGTNACC | 3 cut(s) | 3884, 5176, 7468 |
| BstSLI | GKGCMC | 8 cut(s) | 984, 3340, 3372, 3960, 6116, 9378, 11382, 11473 |
| BstSNI | TACGTA | 1 cut(s) | 3441 |
| BstUI | CGCG | 4 cut(s) | 2514, 9695, 10170, 10733 |
| BstV2I | GAAGAC | 6 cut(s) | 255, 1588, 5618, 8172, 9375, 11433 |
| BstX2I | RGATCY | 8 cut(s) | 395, 2766, 2897, 5411, 6595, 6842, 7226, 8917 |
| BstXI | CCANNNNNNTGG | 6 cut(s) | 2036, 3140, 6481, 10579, 10771, 11389 |
| BstYI | RGATCY | 8 cut(s) | 395, 2766, 2897, 5411, 6595, 6842, 7226, 8917 |
| Bsu36I | CCTNAGG | 3 cut(s) | 4211, 9522, 9846 |
| BsuI | GTATCC | 7 cut(s) | 2125, 2753, 5275, 6884, 7012, 8545, 8830 |
| BtgI | CCRYGG | 9 cut(s) | 174, 1188, 5085, 5200, 6108, 6360, 7314, 7647, 9177 |
| BtgZI | GCGATG | 4 cut(s) | 3506, 4847, 10545, 10737 |
| BtrI | CACGTC | 4 cut(s) | 1805, 6935, 9666, 11431 |
| BtsI | GCAGTG | 7 cut(s) | 4669, 7134, 7327, 7427, 9059, 9190, 10949 |
| BveI | ACCTGC | 3 cut(s) | 5920, 6029, 7817 |
| CciI | TCATGA | 1 cut(s) | 430 |
| CfoI | GCGC | 7 cut(s) | 2691, 3637, 5260, 5929, 10170, 10309, 11416 |
| Cfr10I | RCCGGY | 3 cut(s) | 1976, 5302, 5824 |
| Cfr9I | CCCGGG | 1 cut(s) | 953 |
| CseI | GACGC | 9 cut(s) | 7101, 8919, 9428, 9701, 9833, 10722, 10739, 10920, 11019 |
| CsiI | ACCWGGT | 2 cut(s) | 510, 670 |
| CspAI | ACCGGT | 2 cut(s) | 5302, 5824 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 5755, 5790 |
| DraI | TTTAAA | 2 cut(s) | 4644, 5706 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 9790 |
| DriI | GACNNNNNGTC | 2 cut(s) | 457, 3803 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 9790 |
| EaeI | YGGCCR | 5 cut(s) | 306, 4420, 7026, 8844, 9611 |
| Eam1104I | CTCTTC | 9 cut(s) | 548, 3899, 4421, 4564, 4962, 4977, 6288, 6436, 9823 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 457, 3803 |
| EarI | CTCTTC | 9 cut(s) | 548, 3899, 4421, 4564, 4962, 4977, 6288, 6436, 9823 |
| Ecl136II | GAGCTC | 5 cut(s) | 251, 2379, 2422, 5873, 11321 |
| Eco105I | TACGTA | 1 cut(s) | 3441 |
| Eco31I | GGTCTC | 2 cut(s) | 778, 10352 |
| Eco32I | GATATC | 2 cut(s) | 165, 7992 |
| Eco47I | GGWCC | 8 cut(s) | 331, 362, 3272, 4459, 5300, 6581, 7829, 9698 |
| Eco47III | AGCGCT | 2 cut(s) | 2690, 10308 |
| Eco53kI | GAGCTC | 5 cut(s) | 251, 2379, 2422, 5873, 11321 |
| Eco72I | CACGTG | 1 cut(s) | 5987 |
| Eco81I | CCTNAGG | 3 cut(s) | 4211, 9522, 9846 |
| Eco88I | CYCGRG | 2 cut(s) | 454, 953 |
| Eco91I | GGTNACC | 3 cut(s) | 3884, 5176, 7468 |
| EcoICRI | GAGCTC | 5 cut(s) | 251, 2379, 2422, 5873, 11321 |
| EcoNI | CCTNNNNNAGG | 5 cut(s) | 1062, 1473, 1791, 6120, 6143 |
| EcoO109I | RGGNCCY | 8 cut(s) | 3272, 3337, 3369, 6113, 7352, 7829, 9215, 9698 |
| EcoO65I | GGTNACC | 3 cut(s) | 3884, 5176, 7468 |
| EcoRI | GAATTC | 3 cut(s) | 2604, 2624, 9103 |
| EcoRV | GATATC | 2 cut(s) | 165, 7992 |
| EcoT22I | ATGCAT | 4 cut(s) | 7924, 8485, 8526, 8965 |
| Esp3I | CGTCTC | 8 cut(s) | 2462, 3376, 3785, 8087, 10740, 10938, 11037, 11354 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1279, 1311, 2612, 2644, 3017, 3049 |
| FaqI | GGGAC | 9 cut(s) | 460, 518, 989, 4923, 4999, 5762, 6882, 7531, 9619 |
| FauI | CCCGC | 5 cut(s) | 88, 4935, 5777, 5885, 9688 |
| FauNDI | CATATG | 1 cut(s) | 4963 |
| FbaI | TGATCA | 7 cut(s) | 427, 2131, 3016, 3733, 3768, 7291, 9154 |
| FblI | GTMKAC | 2 cut(s) | 2976, 7179 |
| GlaI | GCGC | 7 cut(s) | 2690, 3636, 5259, 5928, 10169, 10308, 11415 |
| GsaI | CCCAGC | 2 cut(s) | 2081, 2216 |
| HaeII | RGCGCY | 4 cut(s) | 2692, 3638, 5261, 10310 |
| HgaI | GACGC | 9 cut(s) | 7101, 8919, 9428, 9701, 9833, 10722, 10739, 10920, 11019 |
| HhaI | GCGC | 7 cut(s) | 2691, 3637, 5260, 5929, 10170, 10309, 11416 |
| Hin1I | GRCGYC | 2 cut(s) | 10931, 11030 |
| Hin6I | GCGC | 7 cut(s) | 2689, 3635, 5258, 5927, 10168, 10307, 11414 |
| HinP1I | GCGC | 7 cut(s) | 2689, 3635, 5258, 5927, 10168, 10307, 11414 |
| HincII | GTYRAC | 8 cut(s) | 1044, 1513, 1819, 3594, 6073, 7900, 9174, 10867 |
| HindII | GTYRAC | 8 cut(s) | 1044, 1513, 1819, 3594, 6073, 7900, 9174, 10867 |
| HindIII | AAGCTT | 4 cut(s) | 2891, 3893, 4082, 9588 |
| HpaI | GTTAAC | 5 cut(s) | 1819, 3594, 6073, 7900, 10867 |
| Hpy99I | CGWCG | 2 cut(s) | 6537, 11459 |
| Hsp92I | GRCGYC | 2 cut(s) | 10931, 11030 |
| HspAI | GCGC | 7 cut(s) | 2689, 3635, 5258, 5927, 10168, 10307, 11414 |
| Kpn2I | TCCGGA | 2 cut(s) | 2460, 7421 |
| KpnI | GGTACC | 2 cut(s) | 4210, 8216 |
| Ksp22I | TGATCA | 7 cut(s) | 427, 2131, 3016, 3733, 3768, 7291, 9154 |
| KspAI | GTTAAC | 5 cut(s) | 1819, 3594, 6073, 7900, 10867 |
| LguI | GCTCTTC | 2 cut(s) | 4962, 6288 |
| MabI | ACCWGGT | 2 cut(s) | 510, 670 |
| MbiI | CCGCTC | 1 cut(s) | 5526 |
| MfeI | CAATTG | 3 cut(s) | 2121, 5462, 6825 |
| MflI | RGATCY | 8 cut(s) | 395, 2766, 2897, 5411, 6595, 6842, 7226, 8917 |
| MlsI | TGGCCA | 3 cut(s) | 4422, 8846, 9613 |
| MluI | ACGCGT | 1 cut(s) | 10731 |
| MluNI | TGGCCA | 3 cut(s) | 4422, 8846, 9613 |
| Mox20I | TGGCCA | 3 cut(s) | 4422, 8846, 9613 |
| Mph1103I | ATGCAT | 4 cut(s) | 7924, 8485, 8526, 8965 |
| MroI | TCCGGA | 2 cut(s) | 2460, 7421 |
| MroXI | GAANNNNTTC | 6 cut(s) | 1462, 2480, 2699, 4820, 6508, 10269 |
| MscI | TGGCCA | 3 cut(s) | 4422, 8846, 9613 |
| Msp20I | TGGCCA | 3 cut(s) | 4422, 8846, 9613 |
| MspA1I | CMGCKG | 6 cut(s) | 1920, 3731, 4493, 6221, 7235, 9086 |
| MspCI | CTTAAG | 2 cut(s) | 2315, 3145 |
| MunI | CAATTG | 3 cut(s) | 2121, 5462, 6825 |
| Mva1269I | GAATGC | 7 cut(s) | 1136, 3538, 4305, 7114, 7340, 7599, 8932 |
| MvnI | CGCG | 4 cut(s) | 2514, 9695, 10170, 10733 |
| NciI | CCSGG | 7 cut(s) | 503, 954, 955, 3367, 3949, 5542, 6348 |
| NcoI | CCATGG | 7 cut(s) | 174, 1188, 6108, 6360, 7314, 7647, 9177 |
| NdeI | CATATG | 1 cut(s) | 4963 |
| NmeAIII | GCCGAG | 1 cut(s) | 4771 |
| NsiI | ATGCAT | 4 cut(s) | 7924, 8485, 8526, 8965 |
| NspI | RCATGY | 9 cut(s) | 899, 1351, 1764, 2183, 4746, 7059, 8439, 8524, 8877 |
| NspV | TTCGAA | 2 cut(s) | 3979, 7106 |
| OliI | CACNNNNGTG | 1 cut(s) | 1158 |
| PaeI | GCATGC | 2 cut(s) | 899, 1351 |
| PaeR7I | CTCGAG | 1 cut(s) | 454 |
| PagI | TCATGA | 1 cut(s) | 430 |
| PaqCI | CACCTGC | 2 cut(s) | 5920, 6029 |
| PciI | ACATGT | 3 cut(s) | 1760, 2179, 8435 |
| PciSI | GCTCTTC | 2 cut(s) | 4962, 6288 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2746 |
| PctI | GAATGC | 7 cut(s) | 1136, 3538, 4305, 7114, 7340, 7599, 8932 |
| PdmI | GAANNNNTTC | 6 cut(s) | 1462, 2480, 2699, 4820, 6508, 10269 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 359, 1058, 7042, 8860 |
| PfoI | TCCNGGA | 2 cut(s) | 1057, 1629 |
| PinAI | ACCGGT | 2 cut(s) | 5302, 5824 |
| PmaCI | CACGTG | 1 cut(s) | 5987 |
| PmlI | CACGTG | 1 cut(s) | 5987 |
| Ppu21I | YACGTR | 2 cut(s) | 3441, 5987 |
| PpuMI | RGGWCCY | 3 cut(s) | 3272, 7829, 9698 |
| PscI | ACATGT | 3 cut(s) | 1760, 2179, 8435 |
| PshAI | GACNNNNGTC | 1 cut(s) | 9696 |
| PshBI | ATTAAT | 3 cut(s) | 189, 2799, 3348 |
| PsiI | TTATAA | 1 cut(s) | 4067 |
| Psp124BI | GAGCTC | 5 cut(s) | 253, 2381, 2424, 5875, 11323 |
| Psp1406I | AACGTT | 1 cut(s) | 10053 |
| Psp5II | RGGWCCY | 3 cut(s) | 3272, 7829, 9698 |
| PspCI | CACGTG | 1 cut(s) | 5987 |
| PspEI | GGTNACC | 3 cut(s) | 3884, 5176, 7468 |
| PspFI | CCCAGC | 2 cut(s) | 2077, 2212 |
| PspOMI | GGGCCC | 3 cut(s) | 3336, 3368, 6112 |
| PspPPI | RGGWCCY | 3 cut(s) | 3272, 7829, 9698 |
| PspXI | VCTCGAGB | 1 cut(s) | 454 |
| PstI | CTGCAG | 5 cut(s) | 4345, 4492, 5245, 5680, 9066 |
| PsuI | RGATCY | 8 cut(s) | 395, 2766, 2897, 5411, 6595, 6842, 7226, 8917 |
| PvuII | CAGCTG | 6 cut(s) | 1920, 3731, 4493, 6221, 7235, 9086 |
| SacI | GAGCTC | 5 cut(s) | 253, 2381, 2424, 5875, 11323 |
| SapI | GCTCTTC | 2 cut(s) | 4962, 6288 |
| ScaI | AGTACT | 2 cut(s) | 3792, 5470 |
| SexAI | ACCWGGT | 2 cut(s) | 510, 670 |
| Sfr274I | CTCGAG | 1 cut(s) | 454 |
| SfuI | TTCGAA | 2 cut(s) | 3979, 7106 |
| SinI | GGWCC | 8 cut(s) | 331, 362, 3272, 4459, 5300, 6581, 7829, 9698 |
| SlaI | CTCGAG | 1 cut(s) | 454 |
| SmaI | CCCGGG | 1 cut(s) | 955 |
| SnaBI | TACGTA | 1 cut(s) | 3441 |
| SphI | GCATGC | 2 cut(s) | 899, 1351 |
| SspI | AATATT | 3 cut(s) | 2047, 4359, 4577 |
| SstI | GAGCTC | 5 cut(s) | 253, 2381, 2424, 5875, 11323 |
| TaqII | GACCGA | 1 cut(s) | 4113 |
| TatI | WGTACW | 6 cut(s) | 371, 2244, 3790, 4747, 5468, 8743 |
| TspMI | CCCGGG | 1 cut(s) | 953 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 359, 1058, 7042, 8860 |
| Vha464I | CTTAAG | 2 cut(s) | 2315, 3145 |
| VneI | GTGCAC | 1 cut(s) | 3956 |
| VpaK11BI | GGWCC | 8 cut(s) | 331, 362, 3272, 4459, 5300, 6581, 7829, 9698 |
| VspI | ATTAAT | 3 cut(s) | 189, 2799, 3348 |
| XagI | CCTNNNNNAGG | 5 cut(s) | 1062, 1473, 1791, 6120, 6143 |
| XbaI | TCTAGA | 4 cut(s) | 1298, 2093, 9308, 9721 |
| XceI | RCATGY | 9 cut(s) | 899, 1351, 1764, 2183, 4746, 7059, 8439, 8524, 8877 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 301 |
| XhoI | CTCGAG | 1 cut(s) | 454 |
| XmaI | CCCGGG | 1 cut(s) | 953 |
| XmaJI | CCTAGG | 1 cut(s) | 3208 |
| XmiI | GTMKAC | 2 cut(s) | 2976, 7179 |
| XmnI | GAANNNNTTC | 6 cut(s) | 1462, 2480, 2699, 4820, 6508, 10269 |
| ZrmI | AGTACT | 2 cut(s) | 3792, 5470 |
| Zsp2I | ATGCAT | 4 cut(s) | 7924, 8485, 8526, 8965 |