pycom16g14790
NAC Family

Chromatin structure-remodeling complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0001231
Physical Location & Seq
Forward (+)
10844598 .. 10848012
3415 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g14790.5

Sequence Viewer

Length: 2934 bp
ATGGTGAGTAAAACAGATACTGTTGTTCGGACATTGGCTCGAGATGTTGATGTGCCTGCTTCTAGTATAGGCTCCTCTGGTGGGGAGATGAATTCATCGTTAGTATTGGAAAGTAACATTGAGCATCCTGAGGTGATTGGGAGAGATTCTGGACAGAAAATTGAATCTTTTTCAGTAGAGATACTGATAATGCCAGTCTTCATCTTGGTGTTACGCCTCCTGTTCCTAGGGTCCCAATCGAGTCAAGCGAGGTGGGCCGTCCTGCCATGGTTGATTCTGAAAACAAAAAAGGGAGTTTTGCTAAAGAGAATCCAACATCCCCTTGTATTACTGAGGATGCTGGCTATCATTCTGAAGACCCTGACCGAAATAAATTCAGCAGACAAATCAGAGCATTCTTCAAAAGAGTCCCGAGAATCTTCCCCTCATGATAGAAAAACCATTGTGCTCACGTCATCTGAAAATGTTTGTACTGGAGAAAGTGCACCCTCGTCTGTGGGTTTAGGGGATGTAGTGCCTCCTGTTATGGCTGAGAATAACCCTGGAAGAAAGAATGAACCTGCTTCAGAAGGTTGTACACAATATTCTCCTCTGAGCCATGAGAATTCCACAATTATTCCCTCAATGCTAAATATTGATTCTGGACGGGGTTCTCTTGACAAAGTTGACATGCCCTTTACAGAATCTGAAGTTGTTAATGATATTTGTTTAAATTCAGAAATTTCATCCAAGATTGTTGATTCTGAAACTTCTCATGAATCAGTTGGTGGTGCTTCAGGACGTAATACCACTGTGCATGTTATTCCTTCTGAAAAGGGCATCTTGGAACTTGGAACTGAATTGATTGGGGATGGTAGTATTGATGCTTGCAATAAGGAAGTGGTCCCTATTTCTCATGCTGTTAGTTGTTCACATGAAGAAGTATTGGAAACGGTTTTACCCGCATCTTCTTTGATAGTGGCAGGAAAAATTCATGAATCATCTGACAGAGCTCAAGTTTCCCAGGATGGTAAATTTGTATCAGAAGATAAATCAGAAGTCTTGCTGTCATCTACTGTAGGGGGAGAGGAAACAGTGGAGGACTCATCCATGAAATGCCAGAGTAGCAGCTCACAATCTCCAGTTGATCAGGATCACTGTGTCACTGAAATGGATGTTAAATCGCCACAACATATCTCTGAAAAAATTGATCTTCCTTCATCTTTAAATATGCAGGAAGAAAAGATTGAGGGTTCATCTGAGAAGAGGCCAAGTTGCAGCTCAGTACTACTGGAAGACGTCAAAGGTTCTGGAGCTGTAACAGTTCAAATGGATTTATCTCAGGTTCATGGACCTGTGCAAGAAAATATTTTATCAGAAGGTATGACTGAGGAGGGGATGACTAAGGATATATCCAAGACTTTTCAAGTTTGCAGCTCATTACCTGTGGAGGAACCAGAAGTTTCTAGAGCCGAAGGAGATGCTCTAATTAATTCATCTCAGATTGATGAGAATCTACCAGAAGGAGATAGTGACATATCTGGAAAGTGTCTACTCGGCAGTCCAGTACCAGTGGAAGAAGACAAGATTGATGGAACATCTATGGAACATTTAGGTGGGAGATCAGAGTTACTGGGAGAATCGAAAGGATCTGATACTGAAATGGATGTTTCTCTGGTTAGTGAGCTCCGACCCGAAAATATATCAGAAAATGTTATTGTGCCATCATCTACTGTTGCAGTTAAGGAAGGAAAGATTGAATGCTTATCTGAGAGCAGTCCAGCCAGATCAATAATGTTGGGGGACGCATCTGAAGCTTTAGTTTCTGATAAAATTGTTGTCTCTGAGGTTGACACGTTTGTGCCCGAAAGGATGTTAGAAAATCTGCCTTTATCTTCCTTGACAAAAGAGCAGGAAAATACTGAGGGCTCTTCTGAGAAGGGTCAAGATGGCAGCTCAGTACAACTTGAGGAATCAACTGGGAAGGAAGATGAGATGGGTCATCTAATGGAAACACCCAGATCTTCTGGGGATTTGCTTGTAAAAGAAAGTGTTGATTCAGAAGAGGAGGTTCAGCAGTTATCCAAGAAGCATCCTATAAGCAGTTCAGCGCCGCTGTTGGAATCATTGATTTCTGAACCTGAGACGAGCGATCATTCCGATGCATCCAAGGTTGGCATGGTGCTGCTAGAAGATAGAATGGCGGAGGACGTTGACCTGCCTGCATCCTCCTTGGAGACAGAAGGAAGAGGTATAGATCATCCATCTGAGGTTCTAGATGGCAGCTCAGTGACGGAGGGTCCAAGAACAACTGTAGCTGACAAGGATACTCAGATGAATGCCCCTGATGCTTGTGAGAGGGAGCCAGAAGTTGTGTGTGAATCTGTGGATATGCCTCTGGTTACCTCGACCATGGTGGATGATGGTGTCAAGGGCTCGTCTGAAGCAGAGTTGGAATCTGAAGCTAAAACATTTGATGCTTCTCACGTTTGTGTGGAATTGCCAGAGAATGTGTCTGAAAGCATGGATCAAACTCCGGTTATCTTGATCAATCAGGGTGATGGTGTTGAAGGCTTATCTGAGGCAAGGCCTGTAGGCAGCACCGAATCACCAGAGTCATCAAGATCCGAAGCTAAAGTTGCTGATGCTTCTCAGGTTTCCGGGACAATCCCAGAAGTTGCATCTGAAAATGTGGATCAGCCTCCAGTTAACATGGCTGTGGAGGGTGACAACATCGAAGGCTTGTCGGAGGCAGGGCCTATGGGCAGCTTGGAAACACTAGAGGAGTCCAAATCTGAAGCTAAAGTGTGCGATACTTGTCAGGTTTCTGGGACAACGCCAGAAAATGCATCCGAAGACATGGATATTCAGCCATCATTAATGGCGGAGGAGGGTGAAAAGGTGGGGTTACCAGCTGAGGGATCTGTTGGTGGTAGCCCAATGGAACAGCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000166 GO:0000228 GO:0000785 GO:0000790 GO:0000988 GO:0000990 GO:0000991 GO:0002831 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005829 GO:0006139 GO:0006325 GO:0006338 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0006996 GO:0007275 GO:0008026 GO:0008094 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009611 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009966 GO:0009987 GO:0010104 GO:0010199 GO:0010467 GO:0010468 GO:0010556 GO:0010646 GO:0010959 GO:0016043 GO:0016070 GO:0016462 GO:0016514 GO:0016586 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022414 GO:0023051 GO:0030554 GO:0031323 GO:0031326 GO:0031347 GO:0031974 GO:0031981 GO:0032101 GO:0032392 GO:0032501 GO:0032502 GO:0032508 GO:0032553 GO:0032555 GO:0032559 GO:0032774 GO:0032879 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0034756 GO:0035639 GO:0036094 GO:0040029 GO:0042623 GO:0043044 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043269 GO:0043900 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048367 GO:0048583 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048859 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0070035 GO:0070297 GO:0070603 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0090304 GO:0090567 GO:0090691 GO:0097159 GO:0097367 GO:0097659 GO:0140097 GO:0140110 GO:1900150 GO:1900390 GO:1900393 GO:1900400 GO:1901265 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902494 GO:1902531 GO:1903506 GO:1904949 GO:2000022 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04714 ko05225 map04714 map05225
Pfam Domains
Protein Families
Helicase_C SNF2_N SnAC

Protein Analysis

978

Amino Acids

103.78

Weight (kDa)

4.31

Isoelectric Point (pI)

63.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1281
Acc36I ACCTGC 2 cut(s) 568, 2205
AccI GTMKAC 1 cut(s) 1531
AciI CCGC 4 cut(s) 942, 2093, 2183, 2864
AclWI GGATC 6 cut(s) 1140, 1636, 2514, 2598, 2682, 2908
AcsI RAATTY 7 cut(s) 91, 373, 604, 712, 720, 969, 1013
AcuI CTGAAG 8 cut(s) 374, 549, 708, 759, 1812, 2442, 2460, 2796
AcyI GRCGYC 1 cut(s) 1278
AfaI GTAC 5 cut(s) 472, 577, 1266, 1548, 1941
AfiI CCNNNNNNNGG 2 cut(s) 81, 2897
AflIII ACRYGT 1 cut(s) 1833
AgsI TTSAA 6 cut(s) 164, 402, 1307, 1406, 1739, 2549
AhdI GACNNNNNGTC 1 cut(s) 2277
AjiI CACGTC 1 cut(s) 453
AjnI CCWGG 2 cut(s) 541, 1002
AleI CACNNNNGTG 2 cut(s) 1838, 2469
Alw21I GWGCWC 4 cut(s) 450, 487, 994, 1668
Alw26I GTCTC 3 cut(s) 1825, 2117, 2210
Alw44I GTGCAC 1 cut(s) 483
AlwI GGATC 6 cut(s) 1140, 1636, 2514, 2598, 2682, 2908
AlwNI CAGNNNCTG 2 cut(s) 20, 686
Ama87I CYCGRG 2 cut(s) 39, 411
AoxI GGCC 4 cut(s) 255, 1247, 2567, 2735
ApaLI GTGCAC 1 cut(s) 483
ApeKI GCWGC 8 cut(s) 1107, 1257, 1413, 1932, 2164, 2262, 2577, 2745
ApoI RAATTY 7 cut(s) 91, 373, 604, 712, 720, 969, 1013
AseI ATTAAT 2 cut(s) 1470, 2858
AspA2I CCTAGG 1 cut(s) 226
AspLEI GCGC 1 cut(s) 2092
AspS9I GGNCC 6 cut(s) 231, 255, 883, 1331, 2279, 2735
AsuC2I CCSGG 1 cut(s) 2641
AsuHPI GGTGA 6 cut(s) 16, 145, 2549, 2580, 2717, 2885
AvaI CYCGRG 2 cut(s) 39, 411
AvaII GGWCC 4 cut(s) 231, 883, 1331, 2279
AvrII CCTAGG 1 cut(s) 226
AxyI CCTNAGG 1 cut(s) 129
BaeGI GKGCMC 2 cut(s) 487, 1845
BaeI ACNNNNGTAYC 2 cut(s) 9, 42
BanII GRGCYC 4 cut(s) 994, 1668, 1910, 2417
BbsI GAAGAC 5 cut(s) 190, 362, 1281, 1566, 2841
Bbv12I GWGCWC 4 cut(s) 450, 487, 994, 1668
BbvCI CCTCAGC 1 cut(s) 2895
BbvI GCAGC 8 cut(s) 1119, 1269, 1425, 1944, 2151, 2274, 2589, 2757
BceAI ACGGC 1 cut(s) 242
BcgI CGANNNNNNTGC 2 cut(s) 1442, 1476
BciT130I CCWGG 2 cut(s) 543, 1004
BciVI GTATCC 1 cut(s) 2299
BclI TGATCA 2 cut(s) 1126, 2526
BcnI CCSGG 1 cut(s) 2641
BcoDI GTCTC 3 cut(s) 1825, 2117, 2210
BfaI CTAG 6 cut(s) 63, 227, 1446, 2168, 2255, 2759
BfmI CTRYAG 3 cut(s) 1056, 2292, 2571
BfoI RGCGCY 1 cut(s) 2093
BfuAI ACCTGC 2 cut(s) 568, 2205
BfuI GTATCC 1 cut(s) 2299
BglII AGATCT 1 cut(s) 2000
BisI GCNGC 9 cut(s) 1108, 1258, 1414, 1933, 2093, 2165, 2263, 2578, 2746
BlnI CCTAGG 1 cut(s) 226
BlsI GCNGC 9 cut(s) 1109, 1259, 1415, 1934, 2094, 2166, 2264, 2579, 2747
BmcAI AGTACT 1 cut(s) 1266
Bme1390I CCNGG 3 cut(s) 543, 1004, 2641
Bme18I GGWCC 4 cut(s) 231, 883, 1331, 2279
BmeRI GACNNNNNGTC 1 cut(s) 2277
BmeT110I CYCGRG 2 cut(s) 39, 411
BmgBI CACGTC 1 cut(s) 453
BmgT120I GGNCC 6 cut(s) 231, 255, 883, 1331, 2279, 2735
BmiI GGNNCC 7 cut(s) 73, 232, 233, 885, 1434, 2280, 2343
BmrFI CCNGG 3 cut(s) 543, 1004, 2641
BmrI ACTGGG 2 cut(s) 1622, 1968
BmuI ACTGGG 2 cut(s) 1622, 1968
BpiI GAAGAC 5 cut(s) 190, 362, 1281, 1566, 2841
BpmI CTGGAG 4 cut(s) 495, 1104, 1311, 2667
Bpu10I CCTNAGC 1 cut(s) 2895
BpuEI CTTGAG 2 cut(s) 978, 1967
BpuMI CCSGG 1 cut(s) 2641
BsaBI GATNNNNATC 2 cut(s) 1131, 1491
BsaHI GRCGYC 1 cut(s) 1278
BsaJI CCNNGG 7 cut(s) 226, 266, 541, 1002, 2148, 2211, 2391
BsaWI WCCGGW 1 cut(s) 2515
Bsc4I CCNNNNNNNGG 2 cut(s) 81, 2897
Bse1I ACTGG 9 cut(s) 194, 478, 1121, 1275, 1544, 1550, 1617, 1963, 2684
Bse21I CCTNAGG 1 cut(s) 129
Bse8I GATNNNNATC 2 cut(s) 1131, 1491
BseBI CCWGG 2 cut(s) 543, 1004
BseDI CCNNGG 7 cut(s) 226, 266, 541, 1002, 2148, 2211, 2391
BseJI GATNNNNATC 2 cut(s) 1131, 1491
BseLI CCNNNNNNNGG 2 cut(s) 81, 2897
BseNI ACTGG 9 cut(s) 194, 478, 1121, 1275, 1544, 1550, 1617, 1963, 2684
BseRI GAGGAG 6 cut(s) 64, 579, 1385, 2060, 2777, 2882
BseSI GKGCMC 2 cut(s) 487, 1845
BseXI GCAGC 8 cut(s) 1119, 1269, 1425, 1944, 2151, 2274, 2589, 2757
BshFI GGCC 4 cut(s) 257, 1249, 2569, 2737
BsiHKAI GWGCWC 4 cut(s) 450, 487, 994, 1668
BsiHKCI CYCGRG 2 cut(s) 39, 411
BsiSI CCGG 2 cut(s) 2516, 2640
BslFI GGGAC 6 cut(s) 217, 394, 869, 1796, 2656, 2824
BslI CCNNNNNNNGG 2 cut(s) 81, 2897
BsmAI GTCTC 3 cut(s) 1825, 2117, 2210
BsmBI CGTCTC 1 cut(s) 2117
BsmFI GGGAC 6 cut(s) 217, 394, 869, 1796, 2656, 2824
BsmI GAATGC 3 cut(s) 394, 1745, 2323
BsnI GGCC 4 cut(s) 257, 1249, 2569, 2737
BsoBI CYCGRG 2 cut(s) 39, 411
Bsp1286I GDGCHC 7 cut(s) 450, 487, 994, 1668, 1845, 1910, 2417
Bsp1407I TGTACA 1 cut(s) 575
Bsp19I CCATGG 2 cut(s) 266, 2391
BspACI CCGC 4 cut(s) 942, 2093, 2183, 2864
BspANI GGCC 4 cut(s) 257, 1249, 2569, 2737
BspHI TCATGA 3 cut(s) 427, 754, 973
BspLI GGNNCC 7 cut(s) 73, 232, 233, 885, 1434, 2280, 2343
BspMI ACCTGC 2 cut(s) 568, 2205
BspPI GGATC 6 cut(s) 1140, 1636, 2514, 2598, 2682, 2908
BspQI GCTCTTC 1 cut(s) 1915
BsrGI TGTACA 1 cut(s) 575
BsrI ACTGG 9 cut(s) 194, 478, 1121, 1275, 1544, 1550, 1617, 1963, 2684
BssECI CCNNGG 7 cut(s) 226, 266, 541, 1002, 2148, 2211, 2391
BssNI GRCGYC 1 cut(s) 1278
BssT1I CCWWGG 5 cut(s) 226, 266, 2148, 2211, 2391
Bst2UI CCWGG 2 cut(s) 543, 1004
Bst4CI ACNGT 9 cut(s) 22, 793, 934, 1057, 1075, 1139, 1303, 1714, 2293
Bst6I CTCTTC 4 cut(s) 1238, 1915, 2037, 2221
BstACI GRCGYC 1 cut(s) 1278
BstAUI TGTACA 1 cut(s) 575
BstC8I GCNNGC 4 cut(s) 57, 342, 868, 2202
BstDSI CCRYGG 2 cut(s) 266, 2391
BstEII GGTNACC 2 cut(s) 2380, 2886
BstH2I RGCGCY 1 cut(s) 2093
BstHHI GCGC 1 cut(s) 2092
BstMAI GTCTC 3 cut(s) 1825, 2117, 2210
BstMWI GCNNNNNNNGC 5 cut(s) 254, 1104, 1793, 2327, 2618
BstNI CCWGG 2 cut(s) 543, 1004
BstNSI RCATGY 2 cut(s) 673, 800
BstPI GGTNACC 2 cut(s) 2380, 2886
BstSCI CCNGG 3 cut(s) 541, 1002, 2639
BstSFI CTRYAG 3 cut(s) 1056, 2292, 2571
BstSLI GKGCMC 2 cut(s) 487, 1845
BstV1I GCAGC 8 cut(s) 1119, 1269, 1425, 1944, 2151, 2274, 2589, 2757
BstV2I GAAGAC 5 cut(s) 190, 362, 1281, 1566, 2841
BstX2I RGATCY 4 cut(s) 1628, 2000, 2603, 2900
BstYI RGATCY 4 cut(s) 1628, 2000, 2603, 2900
Bsu36I CCTNAGG 1 cut(s) 129
BsuI GTATCC 1 cut(s) 2299
BsuRI GGCC 4 cut(s) 257, 1249, 2569, 2737
BtgI CCRYGG 2 cut(s) 266, 2391
BtrI CACGTC 1 cut(s) 453
BtsIMutI CAGTG 6 cut(s) 789, 1080, 1135, 1143, 1557, 2274
BveI ACCTGC 2 cut(s) 568, 2205
Cac8I GCNNGC 4 cut(s) 57, 342, 868, 2202
CaiI CAGNNNCTG 2 cut(s) 20, 686
CciI TCATGA 3 cut(s) 427, 754, 973
CfoI GCGC 1 cut(s) 2092
Cfr13I GGNCC 6 cut(s) 231, 255, 883, 1331, 2279, 2735
CseI GACGC 1 cut(s) 1793
Csp6I GTAC 5 cut(s) 471, 576, 1265, 1547, 1940
CspCI CAANNNNNGTGG 2 cut(s) 233, 268
CviQI GTAC 5 cut(s) 471, 576, 1265, 1547, 1940
DraI TTTAAA 2 cut(s) 711, 1206
DriI GACNNNNNGTC 1 cut(s) 2277
Eam1104I CTCTTC 4 cut(s) 1238, 1915, 2037, 2221
Eam1105I GACNNNNNGTC 1 cut(s) 2277
EarI CTCTTC 4 cut(s) 1238, 1915, 2037, 2221
EciI GGCGGA 2 cut(s) 2198, 2879
Ecl136II GAGCTC 2 cut(s) 992, 1666
Eco130I CCWWGG 5 cut(s) 226, 266, 2148, 2211, 2391
Eco147I AGGCCT 1 cut(s) 2569
Eco24I GRGCYC 4 cut(s) 994, 1668, 1910, 2417
Eco47I GGWCC 4 cut(s) 231, 883, 1331, 2279
Eco53kI GAGCTC 2 cut(s) 992, 1666
Eco57I CTGAAG 8 cut(s) 374, 549, 708, 759, 1812, 2442, 2460, 2796
Eco81I CCTNAGG 1 cut(s) 129
Eco88I CYCGRG 2 cut(s) 39, 411
Eco91I GGTNACC 2 cut(s) 2380, 2886
EcoICRI GAGCTC 2 cut(s) 992, 1666
EcoO109I RGGNCCY 2 cut(s) 231, 2735
EcoO65I GGTNACC 2 cut(s) 2380, 2886
EcoRI GAATTC 2 cut(s) 91, 604
EcoRII CCWGG 2 cut(s) 541, 1002
EcoT14I CCWWGG 5 cut(s) 226, 266, 2148, 2211, 2391
EcoT22I ATGCAT 2 cut(s) 2146, 2830
EcoT38I GRGCYC 4 cut(s) 994, 1668, 1910, 2417
ErhI CCWWGG 5 cut(s) 226, 266, 2148, 2211, 2391
Esp3I CGTCTC 1 cut(s) 2117
FalI AAGNNNNNCTT 2 cut(s) 806, 838
FaqI GGGAC 6 cut(s) 217, 394, 869, 1796, 2656, 2824
FauI CCCGC 1 cut(s) 949
FbaI TGATCA 2 cut(s) 1126, 2526
FblI GTMKAC 1 cut(s) 1531
Fnu4HI GCNGC 9 cut(s) 1108, 1258, 1414, 1933, 2093, 2165, 2263, 2578, 2746
FriOI GRGCYC 4 cut(s) 994, 1668, 1910, 2417
Fsp4HI GCNGC 9 cut(s) 1108, 1258, 1414, 1933, 2093, 2165, 2263, 2578, 2746
FspBI CTAG 6 cut(s) 63, 227, 1446, 2168, 2255, 2759
GlaI GCGC 1 cut(s) 2091
GluI GCNGC 9 cut(s) 1108, 1258, 1414, 1933, 2093, 2165, 2263, 2578, 2746
GsuI CTGGAG 4 cut(s) 495, 1104, 1311, 2667
HaeII RGCGCY 1 cut(s) 2093
HaeIII GGCC 4 cut(s) 257, 1249, 2569, 2737
HapII CCGG 2 cut(s) 2516, 2640
HgaI GACGC 1 cut(s) 1793
HhaI GCGC 1 cut(s) 2092
Hin1I GRCGYC 1 cut(s) 1278
Hin6I GCGC 1 cut(s) 2090
HinP1I GCGC 1 cut(s) 2090
HincII GTYRAC 4 cut(s) 667, 1831, 2194, 2689
HindII GTYRAC 4 cut(s) 667, 1831, 2194, 2689
HindIII AAGCTT 1 cut(s) 1794
HpaI GTTAAC 1 cut(s) 2689
HpaII CCGG 2 cut(s) 2516, 2640
HphI GGTGA 6 cut(s) 16, 145, 2549, 2580, 2717, 2885
Hpy166II GTNNAC 8 cut(s) 485, 578, 667, 911, 1532, 1831, 2194, 2689
Hpy8I GTNNAC 8 cut(s) 485, 578, 667, 911, 1532, 1831, 2194, 2689
HpyCH4III ACNGT 9 cut(s) 22, 793, 934, 1057, 1075, 1139, 1303, 1714, 2293
HpyCH4IV ACGT 6 cut(s) 452, 781, 1278, 1835, 2190, 2466
HpyF10VI GCNNNNNNNGC 5 cut(s) 254, 1104, 1793, 2327, 2618
HpySE526I ACGT 6 cut(s) 452, 781, 1278, 1835, 2190, 2466
Hsp92I GRCGYC 1 cut(s) 1278
HspAI GCGC 1 cut(s) 2090
KflI GGGWCCC 1 cut(s) 231
Ksp22I TGATCA 2 cut(s) 1126, 2526
KspAI GTTAAC 1 cut(s) 2689
LguI GCTCTTC 1 cut(s) 1915
LmnI GCTCC 4 cut(s) 77, 1292, 1671, 2341
Lsp1109I GCAGC 8 cut(s) 1119, 1269, 1425, 1944, 2151, 2274, 2589, 2757
MaeI CTAG 6 cut(s) 63, 227, 1446, 2168, 2255, 2759
MaeII ACGT 6 cut(s) 452, 781, 1278, 1835, 2190, 2466
MflI RGATCY 4 cut(s) 1628, 2000, 2603, 2900
MhlI GDGCHC 7 cut(s) 450, 487, 994, 1668, 1845, 1910, 2417
MlyI GAGTC 5 cut(s) 250, 416, 1076, 2603, 2774
MmeI TCCRAC 5 cut(s) 337, 1693, 2079, 2412, 2706
Mph1103I ATGCAT 2 cut(s) 2146, 2830
MseI TTAA 8 cut(s) 696, 710, 1158, 1205, 1470, 1722, 2688, 2858
MslI CAYNNNNRTG 7 cut(s) 206, 1148, 1593, 1838, 2139, 2469, 2696
MspA1I CMGCKG 2 cut(s) 2095, 2894
MspI CCGG 2 cut(s) 2516, 2640
MspR9I CCNGG 3 cut(s) 543, 1004, 2641
Mva1269I GAATGC 3 cut(s) 394, 1745, 2323
MvaI CCWGG 2 cut(s) 543, 1004
MwoI GCNNNNNNNGC 5 cut(s) 254, 1104, 1793, 2327, 2618
NciI CCSGG 1 cut(s) 2641
NcoI CCATGG 2 cut(s) 266, 2391
NlaIV GGNNCC 7 cut(s) 73, 232, 233, 885, 1434, 2280, 2343
NmeAIII GCCGAG 1 cut(s) 1515
NmuCI GTSAC 4 cut(s) 1141, 1511, 2269, 2705
NsiI ATGCAT 2 cut(s) 2146, 2830
NspI RCATGY 2 cut(s) 673, 800
OliI CACNNNNGTG 2 cut(s) 1838, 2469
PaeR7I CTCGAG 1 cut(s) 39
PagI TCATGA 3 cut(s) 427, 754, 973
PceI AGGCCT 1 cut(s) 2569
PciSI GCTCTTC 1 cut(s) 1915
PcsI WCGNNNNNNNCGW 1 cut(s) 245
PctI GAATGC 3 cut(s) 394, 1745, 2323
PfoI TCCNGGA 1 cut(s) 2639
PkrI GCNGC 9 cut(s) 1109, 1259, 1415, 1934, 2094, 2166, 2264, 2579, 2747
PleI GAGTC 5 cut(s) 249, 415, 1076, 2602, 2773
PpsI GAGTC 5 cut(s) 249, 415, 1076, 2602, 2773
PpuMI RGGWCCY 1 cut(s) 231
PshBI ATTAAT 2 cut(s) 1470, 2858
Psp124BI GAGCTC 2 cut(s) 994, 1668
Psp5II RGGWCCY 1 cut(s) 231
Psp6I CCWGG 2 cut(s) 541, 1002
PspEI GGTNACC 2 cut(s) 2380, 2886
PspGI CCWGG 2 cut(s) 541, 1002
PspN4I GGNNCC 7 cut(s) 73, 232, 233, 885, 1434, 2280, 2343
PspPI GGNCC 6 cut(s) 231, 255, 883, 1331, 2279, 2735
PspPPI RGGWCCY 1 cut(s) 231
PstNI CAGNNNCTG 2 cut(s) 20, 686
PsuI RGATCY 4 cut(s) 1628, 2000, 2603, 2900
PvuII CAGCTG 1 cut(s) 2894
RsaI GTAC 5 cut(s) 472, 577, 1266, 1548, 1941
RsaNI GTAC 5 cut(s) 471, 576, 1265, 1547, 1940
RseI CAYNNNNRTG 7 cut(s) 206, 1148, 1593, 1838, 2139, 2469, 2696
SacI GAGCTC 2 cut(s) 994, 1668
SapI GCTCTTC 1 cut(s) 1915
SaqAI TTAA 8 cut(s) 696, 710, 1158, 1205, 1470, 1722, 2688, 2858
SatI GCNGC 9 cut(s) 1108, 1258, 1414, 1933, 2093, 2165, 2263, 2578, 2746
Sau96I GGNCC 6 cut(s) 231, 255, 883, 1331, 2279, 2735
ScaI AGTACT 1 cut(s) 1266
SchI GAGTC 5 cut(s) 250, 416, 1076, 2603, 2774
ScrFI CCNGG 3 cut(s) 543, 1004, 2641
SduI GDGCHC 7 cut(s) 450, 487, 994, 1668, 1845, 1910, 2417
SfcI CTRYAG 3 cut(s) 1056, 2292, 2571
Sfr274I CTCGAG 1 cut(s) 39
SinI GGWCC 4 cut(s) 231, 883, 1331, 2279
SlaI CTCGAG 1 cut(s) 39
SmiMI CAYNNNNRTG 7 cut(s) 206, 1148, 1593, 1838, 2139, 2469, 2696
SmlI CTYRAG 3 cut(s) 39, 993, 1946
SmoI CTYRAG 3 cut(s) 39, 993, 1946
SseBI AGGCCT 1 cut(s) 2569
SsiI CCGC 4 cut(s) 942, 2093, 2183, 2864
SspI AATATT 3 cut(s) 584, 634, 1348
SspMI CTAG 6 cut(s) 63, 227, 1446, 2168, 2255, 2759
SstI GAGCTC 2 cut(s) 994, 1668
StuI AGGCCT 1 cut(s) 2569
StyD4I CCNGG 3 cut(s) 541, 1002, 2639
StyI CCWWGG 5 cut(s) 226, 266, 2148, 2211, 2391
TaaI ACNGT 9 cut(s) 22, 793, 934, 1057, 1075, 1139, 1303, 1714, 2293
TaiI ACGT 6 cut(s) 455, 784, 1281, 1838, 2193, 2469
TaqI TCGA 5 cut(s) 40, 239, 1622, 2387, 2715
TaqII GACCGA 1 cut(s) 380
TatI WGTACW 4 cut(s) 470, 575, 1264, 1939
TauI GCSGC 1 cut(s) 2095
Tru1I TTAA 8 cut(s) 696, 710, 1158, 1205, 1470, 1722, 2688, 2858
Tru9I TTAA 8 cut(s) 696, 710, 1158, 1205, 1470, 1722, 2688, 2858
TscAI CASTG 6 cut(s) 796, 1080, 1142, 1150, 1557, 2274
TseFI GTSAC 4 cut(s) 1141, 1511, 2269, 2705
TseI GCWGC 8 cut(s) 1107, 1257, 1413, 1932, 2164, 2262, 2577, 2745
Tsp45I GTSAC 4 cut(s) 1141, 1511, 2269, 2705
TspGWI ACGGA 1 cut(s) 2288
TspRI CASTG 6 cut(s) 796, 1080, 1142, 1150, 1557, 2274
VneI GTGCAC 1 cut(s) 483
VpaK11BI GGWCC 4 cut(s) 231, 883, 1331, 2279
VspI ATTAAT 2 cut(s) 1470, 2858
XapI RAATTY 7 cut(s) 91, 373, 604, 712, 720, 969, 1013
XbaI TCTAGA 2 cut(s) 1445, 2254
XceI RCATGY 2 cut(s) 673, 800
XcmI CCANNNNNNNNNTGG 1 cut(s) 2155
XhoI CTCGAG 1 cut(s) 39
XmaJI CCTAGG 1 cut(s) 226
XmiI GTMKAC 1 cut(s) 1531
XspI CTAG 6 cut(s) 63, 227, 1446, 2168, 2255, 2759
ZraI GACGTC 1 cut(s) 1279
ZrmI AGTACT 1 cut(s) 1266
Zsp2I ATGCAT 2 cut(s) 2146, 2830
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.