RchiOBHm_Chr4g0420731
NAC Family

Chromatin structure-remodeling complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0001231
Physical Location & Seq
Reverse (-)
46471060 .. 46476871
5812 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ39045

Sequence Viewer

Length: 4662 bp
ATGTCTGGTGGTACATTGGGGAGTAAGACTGCTGAACTGGGAAGAAAGCAAGGTACTGATGGGCAGGAACTGTCACATGTTATTCAATCCCAGACAAGTCAAGTGCATTTAGTTAGCAGTTTAGCTGATTCTGATCCAAAAAGAAAAGAGCACCCAAGCTATCTTACCCAAAATAAGCAGCCTACAAACTCATCATCAACAATTGACAGTGCTGCTGGATCCTCTGATAAGAGTTCTGCTCTGGGACGTATCCAGACTGCTAACGTAAACGATGTTGCTCGTGTGATGAAAGAGGTCTTTTCTGGCACACGTCTATCAAAAGCTAAAATTTCAGAGTCTTTTGGGAGAGAAGGTCGTGGTTCCCCCCGTGTACCTGTATCCAGTAAGACTCTGGTGGACATGGCCGAAAAGCAAAATCTGGAGGATAAAGCATGTTCTGGTGTGGAATTGAAGGTTTCTGAACCTGAGATGGGTGATCTTTCGAATGCGTCCAAGGTTGGTGCAGTGGTTGTTCCAGAAAACATTACCTCTTTAGCAACTGAAGGAAAAAAGGTAGACTGCTTACCTGTTGGCAGCTTAGTAACACTGGAGAGTTCAAAAGGATCTCCAGCTGAAAAGGATTCTTTGATGGCTTCCTACAATGCTTCTGGGAGAGTGGCAGAAATTGATCAGCCTGTGGTTACATTGACCATGGGCAGTGATAGTGTTGAATGCTCATCTGAGGCAGGGCCTGTGGGCAGTCTTAAATCACAGGAGTCAGAACATGAAGCTAGAGTTAGTGATGCTTTTCAGGTTTCCGGAACACTGCCAGAAAATGTGTCTGGAAACATGGATCAGCCCTTGGTAACCTTGAGCAAGGAGTGTGCTAGTGTTGCAGCCTTGTCTGAGCCAGGGACTCTAGGATGCTCCAAGTTACCAGAGGAGTCGGGCTGTGAAGCTAAAGTTGGTGATACTTCTCAGATTTGTGGAATGCTGCCAGAAAATGTTTCTGGAAAAATGAATCAGTCTCTGGTTACTTCGACCATGGGAGGTGATAGTGTTGTAGGCTTATCTGAGGCACAACCTATAGACAGCTCCAAGCCACCAGAGGAGTTAGAATGTGCAGCTAAAGTTGTTGAAACTTCTCAGGTTTGTGTGACAAGCATAGATCACCCTCCAATTACCTTGACTATGGGGGGTGATAGTGTTGAAGGCTCTGAGGCAGGTCCTGTAGGTAGCTCCAAACCTCCAGAGGAGGTGGAATGTGAGGCTAAAGTTGGTAGTACTTCTCAAGTTAACGAGCCAATGCCGGAAAATGCATCTGAAAACCTGGATTTCCAGCCCTCTTATGAAGCTAAAGTTGGTGATGTTTCTGAGGTTTGTGAGATATCGACAGAAGTTGTGCCTGAAAACATGGATTTGCAGCCATCTTCAACAGGACAGGAGTCGGAATCTGAAGCTACATTTGGTGTTGCTTCTCAGGTTTGCGAGACGGTGTTGGACATTGTATCTGAAAACATGGAGTTGCAGCCATCTTCAACAGTGCAACAGTTGAAATCTGAAGACAAAGTTGATGCCTCTCAGGTTTGTGAGACAGTGTTGGAATTCGTACCTGAGAAAATGGATTTGCAGCCATCTTCAACAGTGCAGGAGTCGGAATCTGAAGCTAGAGGTGGTGAGGCTTCTCAGGTTAGCAAAACATTGCTGGAGTCTGGAAACATGGATTTGCAGACATCGGCAACAGCACACGACTCAATATCTGAAGCTAAAGCTGGTGAGGCGTTTCAGTTTAGTGAAACATTGCTAGAGTCTGAAAACATGGATTTGCAAACATGTTCAACAGCACAGGAATCAGAATCTGAAGCAAAAGTTTGTGAGACATTGCCGGAGTCTGAAAACATGGATTTGCAGCCATCTTCAGGAGCACAAGTGTCTGAAGCTGATGTTGAAGTGGGTGATGTTTCTCAGGTTTGTGAGACATTGTCGGAGTCTGAAAACATGGATTTGCAACCATCTTCAACTGTACAGGAGTCTGAAGCTGAAGCTAACATTTCTGAATCTTTTGGGAGGGAATGTAGTGTTTCCCCTGGTGTACCTGTATCCAGTGAGACTCCAGTGGACATGGCCAAAAACCAAAATTTGGAGGATAAAGCATGTTCTGGTGTGGAATTGAAGGTTTCTGAAACTGAGATGGGAGATCTTTTGAATGCATCAGAGGCTGACAAGGTGGTTGTTCCAGAAAATGCATCTTCAGAAAACATTGATTTTTCTGCATCCTCCTTAGCAAACAAAGGAAAGAAGGTTGATTGCTTTCCCAGAGGTTCTGTTGGCAGCTCAGGAACACTGCAGAGATCAAATGAATCTCCAGCTGAAAAGGATTTGATGAATTCTTATGATGCTTTTGGGAGAGTGGCAGAAATTGAATCTGAAAACATTGATCAGCCTCCCGTTACATTGACCATGGGCAGTGATAGTGTTGAAGGCTTATCTGAGGCAGGGCCTTTAGGCAGTCTCAAATCACAGGAGTCAGAGCATGAATGTAAAGTTAGTGATGCTTTTCAGGTTTCTGTGACATTGCCAGAAAATGTGTCTGGAAACATGGATAAGCCTTTGATTACTTTGAGCAACGGGTGTGATACTGTTAAAGCCTTATCTGTGCCCAAGTCTTCTGAGGAGTCGGACTGTAAAGCTAAAGTTGGTGACGCTTCTCAGATTTGTGCAACGCTGCCAGAAATTTTTTCTTGTAACACGGATCAGCCTGCGGTTACTTTGACCATTGGAGGTAATAGTGTTGCAGACTTACCTGAGGCACAACCTATCGGCAGCTCCAAGCCACCAGAGGAGTTAGAATGTGAAGTTAAAGTCGTTGAAGCTTCTCAGGTTTGTGGGACATGGCCAGAAAATACTTCTGAAAGCATGGATCAGCGTCCAGCTACATTGACCGTGACATGTGATAGTGTTGAAGCCTCATTTGACGCGGGTCCTGTAAGAAGCCCCAAACCTCTAGAGGAGATGGAGTGTGAGGCCAAAGTTGGTGATGCTTCTCAAGTTTGTGAGTCATTGCCGACAAATGTGTCTGAAAACATGAATTTCCAGCCCTCTTCTGATGCTAAAATTGGTGATAATCCTGAGGTTTTTGAGACATTGACAGAAGTTGAAAACATGGATTTGCAGCCATCTTCAACGGTGCAGGAGTCGGAATCTGAAGCTAAAGTTGGTGATGCTTCTGAGGTTGGTGAGACATTGACGGAAGTTGTGCCTGAAAACCTGGAGTTGCAGCCATCTTCAACAGTGCAGGAGTCGAAATCTGAAGCTAAATTTGGTGATGCTTCTAACGTTTGTGAGACATTTTTGGGATTTGTGCCTGAAAACATGGATTCACAGCCATCTTCAAGAGTGCAGGAGTTGGAGTCTGACACTAAAGTTGGTGAGACATCGACAGAAATTGTGCGCGAAAAAATGGATATGCAGCCATCTTCAACAGTGCAGGAGTTGGAATCTGAAGCTAAAGTTGGTGATGCTTCTCATGTTTGTGAGACAGTGTTGGAATTTGTTCCTGAAAACATGGATTTGCAGCCATCTTCAACAGCGCTGGAGTTGCAATGTGAAGCTAAATTTGGTGTTACTTCTGAGGTTTGTGAGAGCATAACAGAAATTGTATCTGAAAACATGGATTTGCAGCCATCTTCAATGTCACCTAAGTCGGAATCTAAAGCTAAAGTTGGTGAGGCTCAGGTTTGTGAGACATTGCCCGAGTCTGAAAATATGGATTTGCAGCCATCTTCAACTGCACTGGAATCTGAAGCTAAAGTTAGTGATACGTCTCCGGTTTGTGAGACATTGCCGGAGTCCAAAAACATGGATTTGCAGCCATCTTCAGGAGCACAGGATTCTGAAGCTGATGCTAAAGTGGGTGATATTTCTCAGGTTTGTGAGACATTGCTGGAGTCTGATAACGTGGATTTGCAGCCATCTTCAACTGCACATGAATCTGAAGCGAAAGTTAGTGATGCGTCTCAGGTTTGTGAGACATCGCCGGAGCCCAAAAACATGGATTTGCAGCCATCTCCGACAGCAGAGGAGTCAGAATCTGTAGATAAAGTTGGTGATGTGTCTCAGGTTTGTGAGACATTGCCGGAGTCCGTTAACATGGATGTGCAGCCATGTTCGACAGCACATGAGTCGGAATCTGAAGCTAAAGTTGGTGAGGCGTCTCAGGTTTGTGAGACATTGCCGGAGTCAGAAAACATGGATTTGACATTGCGAGAGTCTGGGAACATGGATTTGCAGTCACCTTCAGCAGCACATGAGTCTGAATCTGAAGCTAAAATTGGTGATGATTCCAAGGTTCGTGAGACATTGCCGGAGTCCGACAACATGGATTTGCAGCCATCTTCAACAGCACTTGAGTCAGAATCTGAAGCTAAAGGTGGTGAGGCTTCTCGGGTTTGTGAGACACTGCCAGAGTCTCAGAACATGGATTTGCAACCATCTTCAAGAGCTCAGGAATCTGAAACTGAAGCCAAAGTAGGTGATGTTTCTCAGGTTTGTGAGACGTTGCTAGGAAATGTGCCCAAAAACATGGATATGCCACCATTGGCAACAGCGCAGGAGGTTGAAGACATGAAGTTATCATCTGAGGAACCCGTCGGTAGCTCAGGGGCACCGCCTAAAGCTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000166 GO:0000228 GO:0000785 GO:0000790 GO:0000988 GO:0000990 GO:0000991 GO:0002831 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005829 GO:0006139 GO:0006325 GO:0006338 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0006996 GO:0007275 GO:0008026 GO:0008094 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009611 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009966 GO:0009987 GO:0010104 GO:0010199 GO:0010467 GO:0010468 GO:0010556 GO:0010646 GO:0010959 GO:0016043 GO:0016070 GO:0016462 GO:0016514 GO:0016586 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022414 GO:0023051 GO:0030554 GO:0031323 GO:0031326 GO:0031347 GO:0031974 GO:0031981 GO:0032101 GO:0032392 GO:0032501 GO:0032502 GO:0032508 GO:0032553 GO:0032555 GO:0032559 GO:0032774 GO:0032879 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0034756 GO:0035639 GO:0036094 GO:0040029 GO:0042623 GO:0043044 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043269 GO:0043900 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0048367 GO:0048583 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048859 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0070035 GO:0070297 GO:0070603 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0090304 GO:0090567 GO:0090691 GO:0097159 GO:0097367 GO:0097659 GO:0140097 GO:0140110 GO:1900150 GO:1900390 GO:1900393 GO:1900400 GO:1901265 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902494 GO:1902531 GO:1903506 GO:1904949 GO:2000022 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04714 ko05225 map04714 map05225
Pfam Domains
Protein Families
Helicase_C SNF2_N SnAC

Protein Analysis

1553

Amino Acids

163.81

Weight (kDa)

4.12

Isoelectric Point (pI)

60.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 3052
Acc36I ACCTGC 1 cut(s) 1193
AccB1I GGYRCC 1 cut(s) 4642
AccB7I CCANNNNNTGG 1 cut(s) 2119
AccI GTMKAC 1 cut(s) 555
AccII CGCG 2 cut(s) 2957, 3432
AccIII TCCGGA 1 cut(s) 797
AciI CCGC 3 cut(s) 2741, 2957, 4646
AclI AACGTT 1 cut(s) 3315
AclWI GGATC 7 cut(s) 128, 213, 226, 610, 840, 2739, 2907
AcoI YGGCCR 3 cut(s) 402, 2103, 2873
AcsI RAATTY 9 cut(s) 327, 1583, 2116, 2365, 2712, 3067, 3296, 3527, 3593
AcyI GRCGYC 1 cut(s) 4190
AfaI GTAC 7 cut(s) 13, 55, 372, 1264, 1590, 2004, 2073
AfeI AGCGCT 1 cut(s) 3570
AfiI CCNNNNNNNGG 4 cut(s) 470, 1898, 2119, 3857
AflIII ACRYGT 4 cut(s) 76, 308, 1811, 2927
AjiI CACGTC 1 cut(s) 311
AjnI CCWGG 4 cut(s) 889, 1308, 2065, 3246
Alw21I GWGCWC 4 cut(s) 153, 1906, 3865, 4483
AlwI GGATC 7 cut(s) 128, 213, 226, 610, 840, 2739, 2907
AlwNI CAGNNNCTG 8 cut(s) 70, 731, 1009, 1208, 1838, 2198, 4070, 4397
Ama87I CYCGRG 2 cut(s) 3731, 4422
Aor13HI TCCGGA 1 cut(s) 797
Aor51HI AGCGCT 1 cut(s) 3570
AoxI GGCC 6 cut(s) 402, 728, 2103, 2477, 2873, 3003
ApoI RAATTY 9 cut(s) 327, 1583, 2116, 2365, 2712, 3067, 3296, 3527, 3593
Asp700I GAANNNNTTC 1 cut(s) 3531
AspLEI GCGC 3 cut(s) 3432, 3571, 4588
AspS9I GGNCC 4 cut(s) 728, 1205, 2477, 2960
AsuII TTCGAA 1 cut(s) 482
AvaI CYCGRG 2 cut(s) 3731, 4422
AvaII GGWCC 2 cut(s) 1205, 2960
AxyI CCTNAGG 2 cut(s) 2784, 3108
BaeGI GKGCMC 3 cut(s) 2640, 4554, 4645
BalI TGGCCA 2 cut(s) 2105, 2875
BamHI GGATCC 1 cut(s) 218
BanI GGYRCC 1 cut(s) 4642
BanII GRGCYC 2 cut(s) 4023, 4483
BauI CACGAG 1 cut(s) 279
BbsI GAAGAC 3 cut(s) 1548, 2637, 4605
Bbv12I GWGCWC 4 cut(s) 153, 1906, 3865, 4483
BcgI CGANNNNNNTGC 2 cut(s) 4143, 4177
BciT130I CCWGG 4 cut(s) 891, 1310, 2067, 3248
BciVI GTATCC 3 cut(s) 260, 388, 2089
BclI TGATCA 2 cut(s) 667, 2416
BfaI CTAG 7 cut(s) 771, 867, 899, 1647, 1784, 2984, 4541
BfmI CTRYAG 4 cut(s) 1065, 1209, 2324, 4071
BfoI RGCGCY 1 cut(s) 3572
BfuAI ACCTGC 1 cut(s) 1193
BfuI GTATCC 3 cut(s) 260, 388, 2089
BglII AGATCT 1 cut(s) 2176
BmcAI AGTACT 1 cut(s) 1264
Bme1390I CCNGG 4 cut(s) 891, 1310, 2067, 3248
Bme18I GGWCC 2 cut(s) 1205, 2960
BmeT110I CYCGRG 2 cut(s) 3731, 4422
BmgBI CACGTC 1 cut(s) 311
BmgT120I GGNCC 4 cut(s) 728, 1205, 2477, 2960
BmiI GGNNCC 6 cut(s) 220, 361, 2961, 4020, 4623, 4644
BmrFI CCNGG 4 cut(s) 891, 1310, 2067, 3248
BmrI ACTGGG 1 cut(s) 47
BmuI ACTGGG 1 cut(s) 47
BoxI GACNNNNGTC 2 cut(s) 1423, 2958
BpiI GAAGAC 3 cut(s) 1548, 2637, 4605
BplI GAGNNNNNCTC 2 cut(s) 223, 255
Bpu10I CCTNAGC 5 cut(s) 2260, 2314, 3711, 4482, 4636
Bpu14I TTCGAA 1 cut(s) 482
BpuEI CTTGAG 4 cut(s) 871, 1254, 3009, 4406
BsaBI GATNNNNATC 1 cut(s) 132
BsaHI GRCGYC 1 cut(s) 4190
BsaJI CCNNGG 8 cut(s) 492, 690, 840, 890, 1023, 2065, 2439, 4323
BsaWI WCCGGW 2 cut(s) 797, 3805
Bsc4I CCNNNNNNNGG 4 cut(s) 470, 1898, 2119, 3857
Bse1I ACTGG 6 cut(s) 42, 381, 591, 2082, 2093, 3777
Bse21I CCTNAGG 2 cut(s) 2784, 3108
Bse8I GATNNNNATC 1 cut(s) 132
BseAI TCCGGA 1 cut(s) 797
BseBI CCWGG 4 cut(s) 891, 1310, 2067, 3248
BseDI CCNNGG 8 cut(s) 492, 690, 840, 890, 1023, 2065, 2439, 4323
BseGI GGATG 3 cut(s) 908, 2252, 4138
BseJI GATNNNNATC 1 cut(s) 132
BseLI CCNNNNNNNGG 4 cut(s) 470, 1898, 2119, 3857
BseNI ACTGG 6 cut(s) 42, 381, 591, 2082, 2093, 3777
BseRI GAGGAG 7 cut(s) 935, 1103, 1247, 2666, 2834, 3002, 4073
BseSI GKGCMC 3 cut(s) 2640, 4554, 4645
Bsh1236I CGCG 2 cut(s) 2957, 3432
BshFI GGCC 6 cut(s) 404, 730, 2105, 2479, 2875, 3005
BshNI GGYRCC 1 cut(s) 4642
BsiHKAI GWGCWC 4 cut(s) 153, 1906, 3865, 4483
BsiHKCI CYCGRG 2 cut(s) 3731, 4422
BsiSI CCGG 9 cut(s) 798, 1289, 1865, 3806, 3824, 4016, 4115, 4214, 4343
BslFI GGGAC 3 cut(s) 258, 907, 2881
BslI CCNNNNNNNGG 4 cut(s) 470, 1898, 2119, 3857
BsmBI CGTCTC 5 cut(s) 1463, 3807, 3999, 4197, 4526
BsmFI GGGAC 3 cut(s) 258, 907, 2881
BsmI GAATGC 4 cut(s) 490, 716, 975, 2191
BsnI GGCC 6 cut(s) 404, 730, 2105, 2479, 2875, 3005
BsoBI CYCGRG 2 cut(s) 3731, 4422
Bsp119I TTCGAA 1 cut(s) 482
Bsp1286I GDGCHC 8 cut(s) 153, 1906, 2640, 3865, 4023, 4483, 4554, 4645
Bsp13I TCCGGA 1 cut(s) 797
Bsp1407I TGTACA 1 cut(s) 2002
Bsp19I CCATGG 3 cut(s) 690, 1023, 2439
BspACI CCGC 3 cut(s) 2741, 2957, 4646
BspANI GGCC 6 cut(s) 404, 730, 2105, 2479, 2875, 3005
BspEI TCCGGA 1 cut(s) 797
BspFNI CGCG 2 cut(s) 2957, 3432
BspLI GGNNCC 6 cut(s) 220, 361, 2961, 4020, 4623, 4644
BspMAI CTGCAG 1 cut(s) 2328
BspMI ACCTGC 1 cut(s) 1193
BspPI GGATC 7 cut(s) 128, 213, 226, 610, 840, 2739, 2907
BspT104I TTCGAA 1 cut(s) 482
BspT107I GGYRCC 1 cut(s) 4642
BsrGI TGTACA 1 cut(s) 2002
BsrI ACTGG 6 cut(s) 42, 381, 591, 2082, 2093, 3777
BssECI CCNNGG 8 cut(s) 492, 690, 840, 890, 1023, 2065, 2439, 4323
BssNI GRCGYC 1 cut(s) 4190
BssSI CACGAG 1 cut(s) 279
BssT1I CCWWGG 6 cut(s) 492, 690, 840, 1023, 2439, 4323
Bst2BI CACGAG 1 cut(s) 279
Bst2UI CCWGG 4 cut(s) 891, 1310, 2067, 3248
Bst6I CTCTTC 1 cut(s) 3085
BstACI GRCGYC 1 cut(s) 4190
BstAUI TGTACA 1 cut(s) 2002
BstBI TTCGAA 1 cut(s) 482
BstC8I GCNNGC 1 cut(s) 2739
BstDSI CCRYGG 3 cut(s) 690, 1023, 2439
BstEII GGTNACC 1 cut(s) 844
BstF5I GGATG 3 cut(s) 908, 2252, 4138
BstFNI CGCG 2 cut(s) 2957, 3432
BstH2I RGCGCY 1 cut(s) 3572
BstHHI GCGC 3 cut(s) 3432, 3571, 4588
BstMWI GCNNNNNNNGC 4 cut(s) 872, 1757, 2195, 3577
BstNI CCWGG 4 cut(s) 891, 1310, 2067, 3248
BstNSI RCATGY 5 cut(s) 80, 435, 1815, 2136, 2931
BstPAI GACNNNNGTC 2 cut(s) 1423, 2958
BstPI GGTNACC 1 cut(s) 844
BstSCI CCNGG 4 cut(s) 889, 1308, 2065, 3246
BstSFI CTRYAG 4 cut(s) 1065, 1209, 2324, 4071
BstSLI GKGCMC 3 cut(s) 2640, 4554, 4645
BstUI CGCG 2 cut(s) 2957, 3432
BstV2I GAAGAC 3 cut(s) 1548, 2637, 4605
BstX2I RGATCY 3 cut(s) 218, 602, 2176
BstXI CCANNNNNNTGG 3 cut(s) 3838, 4030, 4561
BstYI RGATCY 3 cut(s) 218, 602, 2176
Bsu36I CCTNAGG 2 cut(s) 2784, 3108
BsuI GTATCC 3 cut(s) 260, 388, 2089
BsuRI GGCC 6 cut(s) 404, 730, 2105, 2479, 2875, 3005
BtgI CCRYGG 3 cut(s) 690, 1023, 2439
BtgZI GCGATG 1 cut(s) 3996
BtrI CACGTC 1 cut(s) 311
BtsCI GGATG 3 cut(s) 908, 2252, 4138
BtsI GCAGTG 6 cut(s) 510, 703, 803, 2321, 2452, 4436
BveI ACCTGC 1 cut(s) 1193
Cac8I GCNNGC 1 cut(s) 2739
CaiI CAGNNNCTG 8 cut(s) 70, 731, 1009, 1208, 1838, 2198, 4070, 4397
CfoI GCGC 3 cut(s) 3432, 3571, 4588
Cfr13I GGNCC 4 cut(s) 728, 1205, 2477, 2960
CseI GACGC 6 cut(s) 477, 2690, 2894, 2963, 3981, 4179
Csp6I GTAC 7 cut(s) 12, 54, 371, 1263, 1589, 2003, 2072
CviQI GTAC 7 cut(s) 12, 54, 371, 1263, 1589, 2003, 2072
DrdI GACNNNNNNGTC 1 cut(s) 3052
DseDI GACNNNNNNGTC 1 cut(s) 3052
EaeI YGGCCR 3 cut(s) 402, 2103, 2873
Eam1104I CTCTTC 1 cut(s) 3085
EarI CTCTTC 1 cut(s) 3085
Ecl136II GAGCTC 1 cut(s) 4481
Eco130I CCWWGG 6 cut(s) 492, 690, 840, 1023, 2439, 4323
Eco24I GRGCYC 2 cut(s) 4023, 4483
Eco32I GATATC 1 cut(s) 1368
Eco47I GGWCC 2 cut(s) 1205, 2960
Eco47III AGCGCT 1 cut(s) 3570
Eco53kI GAGCTC 1 cut(s) 4481
Eco81I CCTNAGG 2 cut(s) 2784, 3108
Eco88I CYCGRG 2 cut(s) 3731, 4422
Eco91I GGTNACC 1 cut(s) 844
EcoICRI GAGCTC 1 cut(s) 4481
EcoO109I RGGNCCY 4 cut(s) 728, 1205, 2477, 2960
EcoO65I GGTNACC 1 cut(s) 844
EcoRI GAATTC 2 cut(s) 1583, 2365
EcoRII CCWGG 4 cut(s) 889, 1308, 2065, 3246
EcoRV GATATC 1 cut(s) 1368
EcoT14I CCWWGG 6 cut(s) 492, 690, 840, 1023, 2439, 4323
EcoT22I ATGCAT 3 cut(s) 1300, 2191, 2227
EcoT38I GRGCYC 2 cut(s) 4023, 4483
ErhI CCWWGG 6 cut(s) 492, 690, 840, 1023, 2439, 4323
Esp3I CGTCTC 5 cut(s) 1463, 3807, 3999, 4197, 4526
FaqI GGGAC 3 cut(s) 258, 907, 2881
FauI CCCGC 1 cut(s) 2950
FbaI TGATCA 2 cut(s) 667, 2416
FblI GTMKAC 1 cut(s) 555
FokI GGATG 3 cut(s) 915, 2239, 4145
FriOI GRGCYC 2 cut(s) 4023, 4483
FspBI CTAG 7 cut(s) 771, 867, 899, 1647, 1784, 2984, 4541
GlaI GCGC 3 cut(s) 3431, 3570, 4587
HaeII RGCGCY 1 cut(s) 3572
HaeIII GGCC 6 cut(s) 404, 730, 2105, 2479, 2875, 3005
HapII CCGG 9 cut(s) 798, 1289, 1865, 3806, 3824, 4016, 4115, 4214, 4343
HgaI GACGC 6 cut(s) 477, 2690, 2894, 2963, 3981, 4179
HhaI GCGC 3 cut(s) 3432, 3571, 4588
Hin1I GRCGYC 1 cut(s) 4190
Hin6I GCGC 3 cut(s) 3430, 3569, 4586
HinP1I GCGC 3 cut(s) 3430, 3569, 4586
HincII GTYRAC 2 cut(s) 1276, 4126
HindII GTYRAC 2 cut(s) 1276, 4126
HindIII AAGCTT 1 cut(s) 2850
HpaI GTTAAC 2 cut(s) 1276, 4126
HpaII CCGG 9 cut(s) 798, 1289, 1865, 3806, 3824, 4016, 4115, 4214, 4343
Hpy166II GTNNAC 8 cut(s) 268, 371, 397, 556, 1276, 2072, 2098, 4126
Hpy8I GTNNAC 8 cut(s) 268, 371, 397, 556, 1276, 2072, 2098, 4126
Hpy99I CGWCG 1 cut(s) 4631
HpyAV CCTTC 8 cut(s) 344, 445, 536, 1184, 2146, 2272, 2453, 4284
HpyCH4IV ACGT 7 cut(s) 247, 264, 310, 3315, 3800, 3936, 4535
HpyF10VI GCNNNNNNNGC 4 cut(s) 872, 1757, 2195, 3577
HpySE526I ACGT 7 cut(s) 247, 264, 310, 3315, 3800, 3936, 4535
Hsp92I GRCGYC 1 cut(s) 4190
HspAI GCGC 3 cut(s) 3430, 3569, 4586
Kpn2I TCCGGA 1 cut(s) 797
Ksp22I TGATCA 2 cut(s) 667, 2416
KspAI GTTAAC 2 cut(s) 1276, 4126
LmnI GCTCC 7 cut(s) 911, 1079, 1223, 1901, 2810, 3860, 4018
MaeI CTAG 7 cut(s) 771, 867, 899, 1647, 1784, 2984, 4541
MaeII ACGT 7 cut(s) 247, 264, 310, 3315, 3800, 3936, 4535
MfeI CAATTG 1 cut(s) 201
MflI RGATCY 3 cut(s) 218, 602, 2176
MhlI GDGCHC 8 cut(s) 153, 1906, 2640, 3865, 4023, 4483, 4554, 4645
MlsI TGGCCA 2 cut(s) 2105, 2875
MluNI TGGCCA 2 cut(s) 2105, 2875
Mox20I TGGCCA 2 cut(s) 2105, 2875
Mph1103I ATGCAT 3 cut(s) 1300, 2191, 2227
MroI TCCGGA 1 cut(s) 797
MroXI GAANNNNTTC 1 cut(s) 3531
MscI TGGCCA 2 cut(s) 2105, 2875
MseI TTAA 5 cut(s) 744, 1275, 2622, 2838, 4125
MslI CAYNNNNRTG 3 cut(s) 3510, 4133, 4565
Msp20I TGGCCA 2 cut(s) 2105, 2875
MspA1I CMGCKG 2 cut(s) 611, 2348
MspI CCGG 9 cut(s) 798, 1289, 1865, 3806, 3824, 4016, 4115, 4214, 4343
MspR9I CCNGG 4 cut(s) 891, 1310, 2067, 3248
MunI CAATTG 1 cut(s) 201
Mva1269I GAATGC 4 cut(s) 490, 716, 975, 2191
MvaI CCWGG 4 cut(s) 891, 1310, 2067, 3248
MvnI CGCG 2 cut(s) 2957, 3432
MwoI GCNNNNNNNGC 4 cut(s) 872, 1757, 2195, 3577
NcoI CCATGG 3 cut(s) 690, 1023, 2439
NlaIV GGNNCC 6 cut(s) 220, 361, 2961, 4020, 4623, 4644
NmuCI GTSAC 7 cut(s) 72, 1135, 2548, 2678, 2923, 3672, 4269
NsiI ATGCAT 3 cut(s) 1300, 2191, 2227
NspI RCATGY 5 cut(s) 80, 435, 1815, 2136, 2931
NspV TTCGAA 1 cut(s) 482
PciI ACATGT 3 cut(s) 76, 1811, 2927
PctI GAATGC 4 cut(s) 490, 716, 975, 2191
PdmI GAANNNNTTC 1 cut(s) 3531
PflFI GACNNNGTC 1 cut(s) 1960
PflMI CCANNNNNTGG 1 cut(s) 2119
PpuMI RGGWCCY 2 cut(s) 1205, 2960
PscI ACATGT 3 cut(s) 76, 1811, 2927
PshAI GACNNNNGTC 2 cut(s) 1423, 2958
Psp124BI GAGCTC 1 cut(s) 4483
Psp1406I AACGTT 1 cut(s) 3315
Psp5II RGGWCCY 2 cut(s) 1205, 2960
Psp6I CCWGG 4 cut(s) 889, 1308, 2065, 3246
PspEI GGTNACC 1 cut(s) 844
PspGI CCWGG 4 cut(s) 889, 1308, 2065, 3246
PspN4I GGNNCC 6 cut(s) 220, 361, 2961, 4020, 4623, 4644
PspPI GGNCC 4 cut(s) 728, 1205, 2477, 2960
PspPPI RGGWCCY 2 cut(s) 1205, 2960
PstI CTGCAG 1 cut(s) 2328
PstNI CAGNNNCTG 8 cut(s) 70, 731, 1009, 1208, 1838, 2198, 4070, 4397
PsuI RGATCY 3 cut(s) 218, 602, 2176
PsyI GACNNNGTC 1 cut(s) 1960
PvuII CAGCTG 2 cut(s) 611, 2348
RsaI GTAC 7 cut(s) 13, 55, 372, 1264, 1590, 2004, 2073
RsaNI GTAC 7 cut(s) 12, 54, 371, 1263, 1589, 2003, 2072
RseI CAYNNNNRTG 3 cut(s) 3510, 4133, 4565
SacI GAGCTC 1 cut(s) 4483
SaqAI TTAA 5 cut(s) 744, 1275, 2622, 2838, 4125
Sau96I GGNCC 4 cut(s) 728, 1205, 2477, 2960
ScaI AGTACT 1 cut(s) 1264
ScrFI CCNGG 4 cut(s) 891, 1310, 2067, 3248
SduI GDGCHC 8 cut(s) 153, 1906, 2640, 3865, 4023, 4483, 4554, 4645
SfcI CTRYAG 4 cut(s) 1065, 1209, 2324, 4071
SfuI TTCGAA 1 cut(s) 482
SinI GGWCC 2 cut(s) 1205, 2960
SmiMI CAYNNNNRTG 3 cut(s) 3510, 4133, 4565
SmlI CTYRAG 4 cut(s) 850, 1269, 3024, 4385
SmoI CTYRAG 4 cut(s) 850, 1269, 3024, 4385
SsiI CCGC 3 cut(s) 2741, 2957, 4646
SspMI CTAG 7 cut(s) 771, 867, 899, 1647, 1784, 2984, 4541
SstI GAGCTC 1 cut(s) 4483
StyD4I CCNGG 4 cut(s) 889, 1308, 2065, 3246
StyI CCWWGG 6 cut(s) 492, 690, 840, 1023, 2439, 4323
TaiI ACGT 7 cut(s) 250, 267, 313, 3318, 3803, 3939, 4538
TaqI TCGA 6 cut(s) 482, 1019, 1370, 3281, 3416, 4148
TatI WGTACW 2 cut(s) 1262, 2002
Tru1I TTAA 5 cut(s) 744, 1275, 2622, 2838, 4125
Tru9I TTAA 5 cut(s) 744, 1275, 2622, 2838, 4125
TseFI GTSAC 7 cut(s) 72, 1135, 2548, 2678, 2923, 3672, 4269
Tsp45I GTSAC 7 cut(s) 72, 1135, 2548, 2678, 2923, 3672, 4269
TspGWI ACGGA 3 cut(s) 2744, 3242, 4111
Tth111I GACNNNGTC 1 cut(s) 1960
Van91I CCANNNNNTGG 1 cut(s) 2119
VpaK11BI GGWCC 2 cut(s) 1205, 2960
XapI RAATTY 9 cut(s) 327, 1583, 2116, 2365, 2712, 3067, 3296, 3527, 3593
XbaI TCTAGA 1 cut(s) 2983
XceI RCATGY 5 cut(s) 80, 435, 1815, 2136, 2931
XcmI CCANNNNNNNNNTGG 1 cut(s) 388
XmiI GTMKAC 1 cut(s) 555
XmnI GAANNNNTTC 1 cut(s) 3531
XspI CTAG 7 cut(s) 771, 867, 899, 1647, 1784, 2984, 4541
ZrmI AGTACT 1 cut(s) 1264
Zsp2I ATGCAT 3 cut(s) 1300, 2191, 2227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.