Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004746

Physical Location & Seq

Genomic Coordinates Forward (+)

15127265 .. 15127816

Gene Structure 552 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G36026.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 552 bp

ATGACGACAGGCAAAAGCAAGAAGAAGAAGATGGTCCTTAAGGCAGTCTCTGTCGTAGACATCGGCTGTGGCAACTGTAAGTTCCCAAGCTTGTCTTCTTTTTTCAACCCTTCCCCCAAAAAGCCCCGCCTCTACTCCTCTAATTACGGCCACTGCCACTCCTCCACCCCCACCACGGCCTCCTCTTCCTCCGCCGTTCCCTCCACCTCCCACTGGTTCTCTGACACCTCTTCCTCCTCGGCAACACCCTCCGCCGCCGCTGTCGCCGTCGAGAAAGACTCAGACGATCCTTACCTAGATTTCCGACAGTCCATGCTTCAGATGATTCTCGAGAACGAGATTTACTCCAAAAACGATCTCAGAGAGCTTCTCCACTGCTTCCTCTCCCTTAACGAGCCATACCACCACGGCATCATCATCCGCGCTTTCTCCGAAATCTGGGACGGAGTTTTCTCCGCTGCCAAACGCCGTGGAGACGTCCAAGAGTCTCCACTCGTCCACCGTCATGGCTCACGTGCGTCACACCGTAACCACTACCACCGCTCGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0008150 GO:0009966 GO:0010646 GO:0023051 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048583 GO:0050789 GO:0050794 GO:0065007 GO:1900457

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ovate

Protein Analysis

183

Amino Acids

20.36

Weight (kDa)

9.32

Isoelectric Point (pI)

54.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ovate	PF04844	94 - 149	2.2e-24	Transcriptional repressor, ovate

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004746)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36026 AT3G52525
fragaria_vesca	FvH4_3g25970 FvH4_6g19871
malus_domestica	MD03G1152300.v1.1 MD11G1172500.v1.1 MD12G1034500.v1.1 MD14G1035700.v1.1
prunus_persica	Prupe.6G139400_v2.0.a1 Prupe.7G098400_v2.0.a1
pyrus_communis	pycom03g10650 pycom11g14530 pycom12g03180 pycom14g03140
rosa_chinensis	RchiOBHm_Chr3g0475301 RchiOBHm_Chr5g0047261
rosa_laevigata	RLG00000023853 RLG00000034482
rosa_multiflora	Rmu_sc0002310.1_g000034 Rmu_sc0003154.1_g000007 Rmu_ssc0000140.1_g000006
rosa_roxburghii	Rroxscaffold_1G00034110 Rroxscaffold_6G00406400
rosa_rugosa	Rorug03G0147800 Rorug05G0235300
rosa_samantha	Rh5AG314200 Rh5BG322800 Rh5CG350000 Rh5DG333800
rosa_wichuraiana	Rw3G017980 Rw5G029360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	480
AccBSI	CCGCTC	1 cut(s)	543
AccI	GTMKAC	1 cut(s)	57
AccII	CGCG	1 cut(s)	423
AciI	CCGC	8 cut(s)	127, 192, 252, 255, 258, 421, 456, 541
AclWI	GGATC	1 cut(s)	281
AcoI	YGGCCR	1 cut(s)	148
AcuI	CTGAAG	1 cut(s)	302
AcvI	CACGTG	1 cut(s)	515
AcyI	GRCGYC	1 cut(s)	477
AfiI	CCNNNNNNNGG	3 cut(s)	175, 213, 438
AflII	CTTAAG	1 cut(s)	38
AgsI	TTSAA	1 cut(s)	106
AjuI	GAANNNNNNNTTGG	2 cut(s)	79, 111
AluBI	AGCT	2 cut(s)	90, 367
AluI	AGCT	2 cut(s)	90, 367
Alw26I	GTCTC	3 cut(s)	52, 468, 492
AlwI	GGATC	1 cut(s)	281
AlwNI	CAGNNNCTG	1 cut(s)	50
Ama87I	CYCGRG	1 cut(s)	329
AoxI	GGCC	2 cut(s)	148, 177
ApeKI	GCWGC	1 cut(s)	458
AspLEI	GCGC	1 cut(s)	425
AspS9I	GGNCC	1 cut(s)	34
AvaI	CYCGRG	1 cut(s)	329
AvaII	GGWCC	1 cut(s)	34
BbrPI	CACGTG	1 cut(s)	515
BbsI	GAAGAC	1 cut(s)	87
BbvI	GCAGC	1 cut(s)	445
BccI	CCATC	1 cut(s)	25
BceAI	ACGGC	6 cut(s)	163, 179, 192, 251, 424, 453
BcoDI	GTCTC	3 cut(s)	52, 468, 492
BfaI	CTAG	1 cut(s)	296
BfrI	CTTAAG	1 cut(s)	38
BisI	GCNGC	3 cut(s)	255, 258, 459
BlsI	GCNGC	3 cut(s)	256, 259, 460
Bme18I	GGWCC	1 cut(s)	34
BmeT110I	CYCGRG	1 cut(s)	329
BmgT120I	GGNCC	1 cut(s)	34
BmsI	GCATC	1 cut(s)	420
BpiI	GAAGAC	1 cut(s)	87
BplI	GAGNNNNNCTC	6 cut(s)	263, 295, 329, 361, 354, 386
BsaAI	YACGTR	1 cut(s)	515
BsaHI	GRCGYC	1 cut(s)	477
BsaJI	CCNNGG	4 cut(s)	174, 237, 406, 469
BsaXI	ACNNNNNCTCC	2 cut(s)	143, 173
Bsc4I	CCNNNNNNNGG	3 cut(s)	175, 213, 438
Bse1I	ACTGG	1 cut(s)	218
BseDI	CCNNGG	4 cut(s)	174, 237, 406, 469
BseGI	GGATG	1 cut(s)	417
BseLI	CCNNNNNNNGG	3 cut(s)	175, 213, 438
BseMII	CTCAG	2 cut(s)	294, 373
BseNI	ACTGG	1 cut(s)	218
BseRI	GAGGAG	4 cut(s)	127, 151, 172, 226
BseXI	GCAGC	1 cut(s)	445
Bsh1236I	CGCG	1 cut(s)	423
BshFI	GGCC	2 cut(s)	150, 179
BsiHKCI	CYCGRG	1 cut(s)	329
BslFI	GGGAC	1 cut(s)	455
BslI	CCNNNNNNNGG	3 cut(s)	175, 213, 438
BsmAI	GTCTC	3 cut(s)	52, 468, 492
BsmBI	CGTCTC	1 cut(s)	468
BsmFI	GGGAC	1 cut(s)	455
BsnI	GGCC	2 cut(s)	150, 179
BsoBI	CYCGRG	1 cut(s)	329
Bsp143I	GATC	2 cut(s)	286, 355
BspACI	CCGC	8 cut(s)	127, 192, 252, 255, 258, 421, 456, 541
BspANI	GGCC	2 cut(s)	150, 179
BspCNI	CTCAG	2 cut(s)	293, 372
BspFNI	CGCG	1 cut(s)	423
BspPI	GGATC	1 cut(s)	281
BspTI	CTTAAG	1 cut(s)	38
BsrBI	CCGCTC	1 cut(s)	543
BsrI	ACTGG	1 cut(s)	218
BssECI	CCNNGG	4 cut(s)	174, 237, 406, 469
BssMI	GATC	2 cut(s)	286, 355
BssNI	GRCGYC	1 cut(s)	477
Bst4CI	ACNGT	4 cut(s)	77, 309, 503, 527
Bst6I	CTCTTC	2 cut(s)	190, 235
BstACI	GRCGYC	1 cut(s)	477
BstAFI	CTTAAG	1 cut(s)	38
BstBAI	YACGTR	1 cut(s)	515
BstDEI	CTNAG	2 cut(s)	280, 359
BstDSI	CCRYGG	3 cut(s)	174, 406, 469
BstF5I	GGATG	1 cut(s)	417
BstFNI	CGCG	1 cut(s)	423
BstHHI	GCGC	1 cut(s)	425
BstKTI	GATC	2 cut(s)	289, 358
BstMAI	GTCTC	3 cut(s)	52, 468, 492
BstMBI	GATC	2 cut(s)	286, 355
BstMWI	GCNNNNNNNGC	1 cut(s)	263
BstUI	CGCG	1 cut(s)	423
BstV1I	GCAGC	1 cut(s)	445
BstV2I	GAAGAC	1 cut(s)	87
BstXI	CCANNNNNNTGG	1 cut(s)	506
BsuRI	GGCC	2 cut(s)	150, 179
BtgI	CCRYGG	3 cut(s)	174, 406, 469
BtsCI	GGATG	1 cut(s)	417
BtsI	GCAGTG	2 cut(s)	151, 373
BtsIMutI	CAGTG	3 cut(s)	151, 211, 373
CaiI	CAGNNNCTG	1 cut(s)	50
CfoI	GCGC	1 cut(s)	425
Cfr13I	GGNCC	1 cut(s)	34
CseI	GACGC	1 cut(s)	507
CspCI	CAANNNNNGTGG	2 cut(s)	451, 486
CviAII	CATG	2 cut(s)	313, 506
CviJI	RGCY	8 cut(s)	66, 90, 124, 150, 179, 367, 397, 510
CviKI_1	RGCY	8 cut(s)	66, 90, 124, 150, 179, 367, 397, 510
DdeI	CTNAG	2 cut(s)	280, 359
DpnI	GATC	2 cut(s)	288, 357
DpnII	GATC	2 cut(s)	286, 355
EaeI	YGGCCR	1 cut(s)	148
Eam1104I	CTCTTC	2 cut(s)	190, 235
EarI	CTCTTC	2 cut(s)	190, 235
EciI	GGCGGA	2 cut(s)	181, 241
Eco47I	GGWCC	1 cut(s)	34
Eco57I	CTGAAG	1 cut(s)	302
Eco72I	CACGTG	1 cut(s)	515
Eco88I	CYCGRG	1 cut(s)	329
Esp3I	CGTCTC	1 cut(s)	468
FaeI	CATG	2 cut(s)	316, 509
FaiI	YATR	3 cut(s)	314, 400, 507
FalI	AAGNNNNNCTT	2 cut(s)	79, 111
FaqI	GGGAC	1 cut(s)	455
FatI	CATG	2 cut(s)	312, 505
FauI	CCCGC	1 cut(s)	134
FblI	GTMKAC	1 cut(s)	57
Fnu4HI	GCNGC	3 cut(s)	255, 258, 459
FokI	GGATG	1 cut(s)	404
Fsp4HI	GCNGC	3 cut(s)	255, 258, 459
FspBI	CTAG	1 cut(s)	296
GlaI	GCGC	1 cut(s)	424
GluI	GCNGC	3 cut(s)	255, 258, 459
HaeIII	GGCC	2 cut(s)	150, 179
HgaI	GACGC	1 cut(s)	507
HhaI	GCGC	1 cut(s)	425
Hin1I	GRCGYC	1 cut(s)	477
Hin1II	CATG	2 cut(s)	316, 509
Hin6I	GCGC	1 cut(s)	423
HinP1I	GCGC	1 cut(s)	423
HindIII	AAGCTT	1 cut(s)	88
HinfI	GANTC	3 cut(s)	278, 325, 485
Hpy166II	GTNNAC	2 cut(s)	58, 499
Hpy188I	TCNGA	6 cut(s)	223, 283, 305, 321, 362, 433
Hpy188III	TCNNGA	3 cut(s)	271, 329, 331
Hpy8I	GTNNAC	2 cut(s)	58, 499
Hpy99I	CGWCG	1 cut(s)	272
HpyAV	CCTTC	1 cut(s)	120
HpyCH4III	ACNGT	4 cut(s)	77, 309, 503, 527
HpyCH4IV	ACGT	2 cut(s)	477, 514
HpyF10VI	GCNNNNNNNGC	1 cut(s)	263
HpyF3I	CTNAG	2 cut(s)	280, 359
HpySE526I	ACGT	2 cut(s)	477, 514
Hsp92I	GRCGYC	1 cut(s)	477
Hsp92II	CATG	2 cut(s)	316, 509
HspAI	GCGC	1 cut(s)	423
Kzo9I	GATC	2 cut(s)	286, 355
LpnPI	CCDG	2 cut(s)	199, 424
Lsp1109I	GCAGC	1 cut(s)	445
LweI	GCATC	1 cut(s)	420
MaeI	CTAG	1 cut(s)	296
MaeII	ACGT	2 cut(s)	477, 514
MaeIII	GTNAC	2 cut(s)	519, 527
MalI	GATC	2 cut(s)	288, 357
MbiI	CCGCTC	1 cut(s)	543
MboI	GATC	2 cut(s)	286, 355
MboII	GAAGA	6 cut(s)	34, 37, 40, 87, 177, 222
MluCI	AATT	1 cut(s)	142
MlyI	GAGTC	2 cut(s)	272, 494
MmeI	TCCRAC	1 cut(s)	328
MseI	TTAA	2 cut(s)	39, 390
MslI	CAYNNNNRTG	1 cut(s)	504
MspA1I	CMGCKG	2 cut(s)	260, 458
MspCI	CTTAAG	1 cut(s)	38
MvnI	CGCG	1 cut(s)	423
MwoI	GCNNNNNNNGC	1 cut(s)	263
NdeII	GATC	2 cut(s)	286, 355
NlaIII	CATG	2 cut(s)	316, 509
NmeAIII	GCCGAG	1 cut(s)	218
NmuCI	GTSAC	1 cut(s)	519
PaeR7I	CTCGAG	1 cut(s)	329
PfeI	GAWTC	1 cut(s)	325
PkrI	GCNGC	3 cut(s)	256, 259, 460
PleI	GAGTC	2 cut(s)	272, 493
PmaCI	CACGTG	1 cut(s)	515
PmlI	CACGTG	1 cut(s)	515
PpsI	GAGTC	2 cut(s)	272, 493
Ppu21I	YACGTR	1 cut(s)	515
PspCI	CACGTG	1 cut(s)	515
PspPI	GGNCC	1 cut(s)	34
PsrI	GAACNNNNNNTAC	2 cut(s)	326, 358
PstNI	CAGNNNCTG	1 cut(s)	50
RseI	CAYNNNNRTG	1 cut(s)	504
SaqAI	TTAA	2 cut(s)	39, 390
SatI	GCNGC	3 cut(s)	255, 258, 459
Sau3AI	GATC	2 cut(s)	286, 355
Sau96I	GGNCC	1 cut(s)	34
SchI	GAGTC	2 cut(s)	272, 494
SetI	ASST	7 cut(s)	92, 209, 230, 297, 369, 480, 517
SfaNI	GCATC	1 cut(s)	420
Sfr274I	CTCGAG	1 cut(s)	329
SinI	GGWCC	1 cut(s)	34
SlaI	CTCGAG	1 cut(s)	329
SmiMI	CAYNNNNRTG	1 cut(s)	504
SmlI	CTYRAG	2 cut(s)	38, 329
SmoI	CTYRAG	2 cut(s)	38, 329
Sse9I	AATT	1 cut(s)	142
SsiI	CCGC	8 cut(s)	127, 192, 252, 255, 258, 421, 456, 541
SspMI	CTAG	1 cut(s)	296
TaaI	ACNGT	4 cut(s)	77, 309, 503, 527
TaiI	ACGT	2 cut(s)	480, 517
TaqI	TCGA	3 cut(s)	270, 330, 545
TasI	AATT	1 cut(s)	142
TauI	GCSGC	2 cut(s)	257, 260
TfiI	GAWTC	1 cut(s)	325
Tru1I	TTAA	2 cut(s)	39, 390
Tru9I	TTAA	2 cut(s)	39, 390
TscAI	CASTG	3 cut(s)	158, 218, 380
TseFI	GTSAC	1 cut(s)	519
TseI	GCWGC	1 cut(s)	458
Tsp45I	GTSAC	1 cut(s)	519
TspGWI	ACGGA	1 cut(s)	459
TspRI	CASTG	3 cut(s)	158, 218, 380
Vha464I	CTTAAG	1 cut(s)	38
VpaK11BI	GGWCC	1 cut(s)	34
XhoI	CTCGAG	1 cut(s)	329
XmiI	GTMKAC	1 cut(s)	57
XspI	CTAG	1 cut(s)	296
ZraI	GACGTC	1 cut(s)	478

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.