AT2G36190

Belongs to the glycosyl hydrolase 32 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
15174624 .. 15178086
3463 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G36190.1

Sequence Viewer

Length: 1776 bp
ATGGCTATTTCAAATGTTATTTCTGTCTTATTATTATTGCTTGTACTAATCAATTTAAGCAATCAAAATATCAAAGGAATTGATGCATTTCATCAGATTTACGAAGAATTGCAATCTGAATCAGTCGAGTCAGTGAATCATCTTCACAGACCTAGTTTTCACTTTCAACCTCCAAAGCATTGGATTAACGATCCAAATGGTCCAGTATACTACAAAGGTCTCTACCATCTCTTCTACCAATATAACACCAAAGGTGCGGTTTGGGGTAATATTATATGGGCCCATTCGGTTTCTAAAGACTTGGTTAACTGGGAGGCTCTTGAACCGGCTCTTAGTCCTTCAAAATGGTTCGACATCGGAGGTACATGGTCCGGTTCAATAACAATCGTACCGGGAAAAGGACCGATTATCCTCTATACCGGTGTTAACCAGAACGAAACTCAGTTGCAAAACTATGCAATCCCAGAGGACCCATCAGACCCATACCTAAGGAAATGGATTAAACCGGACGATAACCCGATTGCAATCCCAGACTATACAATGAACGGTTCAGCATTCCGTGACCCGACAACCGCTTGGTTCTCCAAAGACGGGCATTGGAGAACCGTGGTAGGGTCAAAAAGAAAGCGTAGAGGAATTGCTTACATCTACAGAAGCCGAGATTTCAAGCATTGGGTCAAAGCTAAGCACCCGGTTCACTCTAAACAGTCAACCGGTATGTGGGAATGTCCTGATTTCTTCCCGGTTTCCTTAACCGATTTCCGAAACGGTTTGGACTTGGATTACGTCGGTCCAAACACCAAGCATGTGTTGAAGGTTAGCTTGGACATTACCCGGTACGAGTATTACACGCTTGGTAAATACGATCTTAAGAAGGACCGGTACATACCGGACGGTAATACTCCCGATGGTTGGGAGGGTTTAAGATTCGATTACGGTAATTTCTACGCTTCCAAGACATTCTTTGACTACAAAAAGAACAGAAGAATCTTATGGGGTTGGGCTAATGAATCTGACACCGTTGAAGATGATATTTTGAAGGGTTGGGCTGGTCTTCAGGTGATTCCAAGAACGGTGCTCCTTGATTCAAGCAAGAAGCAACTTGTGTTTTGGCCTGTTGAAGAGATAGAGTCATTAAGAGGTAACTACGTCCGAATGAACAATCATGACATCAAGATGGGTCAACGCATAGAAGTCAAAGGAATCACTCCTGCTCAAGCCGATGTGGAAGTAACGTTCTATGTTGGAAGTCTAGAGAAAGCTGAGATATTCGATCCGAGTTTCACGTGGAAACCATTGGAATTGTGTAACATTAAAGGCTCGAATGTGAGAGGCGGTGTAGGACCTTTTGGTCTGATCACATTAGCGACTCCTGATTTGGAAGAGTACACTCCTGTCTTCTTTAGAGTCTTCAACGACACTAAAACTCATAAGCCTAAAGTTCTCATGTGCTCCGATGCTAGACCGTCGTCGTTAAAGCAAGACACGGGTTTACTCGCAAAAGATAGGATGTATAAACCATCGTTTGCTGGTTTTGTGGATGTTGATATGGCTGATGGAAGGATCTCTCTAAGGAGTTTGATTGATCATTCAGTAGTAGAGAGCTTTGGAGCATTAGGTAAAACGGTGATAACATCAAGAGTGTATCCAGTGAAAGCAGTAAAAGAGAATGCACATTTGTATGTCTTTAACAATGGAACACAAACTGTGACCATAGAGAGTCTCAATGCTTGGAATATGGATCGTCCTCTGCAAATGAATGATGGAGCTCTTTAA

Protein Analysis

591

Amino Acids

67.41

Weight (kDa)

7.7

Isoelectric Point (pI)

33.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_32N PF00251 54 - 372 2.1e-103 Glycosyl hydrolases family 32 N-terminal domain
Glyco_hydro_32C PF08244 375 - 579 3e-21 Glycosyl hydrolases family 32 C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1350
AccI GTMKAC 1 cut(s) 207
AciI CCGC 3 cut(s) 257, 573, 1335
AclI AACGTT 1 cut(s) 1235
AclWI GGATC 4 cut(s) 185, 1268, 1571, 1749
AcuI CTGAAG 1 cut(s) 1040
AcvI CACGTG 1 cut(s) 1287
AfaI GTAC 6 cut(s) 45, 364, 390, 839, 884, 1388
AfiI CCNNNNNNNGG 5 cut(s) 398, 591, 612, 720, 912
AflII CTTAAG 1 cut(s) 869
AgeI ACCGGT 3 cut(s) 419, 713, 879
AjuI GAANNNNNNNTTGG 2 cut(s) 806, 838
AloI GAACNNNNNNTCC 2 cut(s) 1220, 1252
AluBI AGCT 5 cut(s) 683, 822, 1262, 1605, 1769
AluI AGCT 5 cut(s) 683, 822, 1262, 1605, 1769
Alw21I GWGCWC 3 cut(s) 1080, 1454, 1771
Alw26I GTCTC 2 cut(s) 224, 1727
AlwI GGATC 4 cut(s) 185, 1268, 1571, 1749
AoxI GGCC 2 cut(s) 279, 1112
ApaI GGGCCC 1 cut(s) 283
ArsI GACNNNNNNTTYG 2 cut(s) 1360, 1392
AsiGI ACCGGT 3 cut(s) 419, 713, 879
AspS9I GGNCC 9 cut(s) 200, 279, 280, 369, 401, 469, 791, 877, 1343
AsuC2I CCSGG 4 cut(s) 393, 692, 743, 835
AsuHPI GGTGA 2 cut(s) 1072, 1639
AvaII GGWCC 7 cut(s) 200, 369, 401, 469, 791, 877, 1343
AxyI CCTNAGG 1 cut(s) 488
BaeGI GKGCMC 1 cut(s) 283
BaeI ACNNNNGTAYC 2 cut(s) 372, 405
BanII GRGCYC 2 cut(s) 283, 1771
BarI GAAGNNNNNNTAC 2 cut(s) 866, 898
BbrPI CACGTG 1 cut(s) 1287
BbsI GAAGAC 3 cut(s) 1046, 1390, 1402
Bbv12I GWGCWC 3 cut(s) 1080, 1454, 1771
BccI CCATC 7 cut(s) 234, 481, 902, 1171, 1528, 1550, 1757
BciVI GTATCC 1 cut(s) 1656
BclI TGATCA 2 cut(s) 1356, 1585
BcnI CCSGG 4 cut(s) 393, 692, 743, 835
BcoDI GTCTC 2 cut(s) 224, 1727
BfaI CTAG 3 cut(s) 153, 1253, 1461
BfmI CTRYAG 1 cut(s) 649
BfrI CTTAAG 1 cut(s) 869
BfuI GTATCC 1 cut(s) 1656
BlpI GCTNAGC 1 cut(s) 684
Bme1390I CCNGG 4 cut(s) 393, 692, 743, 835
Bme18I GGWCC 7 cut(s) 200, 369, 401, 469, 791, 877, 1343
BmgT120I GGNCC 9 cut(s) 200, 279, 280, 369, 401, 469, 791, 877, 1343
BmiI GGNNCC 2 cut(s) 281, 471
BmrFI CCNGG 4 cut(s) 393, 692, 743, 835
BmrI ACTGGG 1 cut(s) 319
BmsI GCATC 2 cut(s) 73, 1447
BmuI ACTGGG 1 cut(s) 319
BoxI GACNNNNGTC 1 cut(s) 1468
BpiI GAAGAC 3 cut(s) 1046, 1390, 1402
Bpu1102I GCTNAGC 1 cut(s) 684
BpuEI CTTGAG 1 cut(s) 1200
BpuMI CCSGG 4 cut(s) 393, 692, 743, 835
BsaAI YACGTR 1 cut(s) 1287
BsaBI GATNNNNATC 1 cut(s) 524
BsaI GGTCTC 1 cut(s) 224
BsaJI CCNNGG 1 cut(s) 606
BsaWI WCCGGW 6 cut(s) 371, 419, 505, 713, 879, 889
Bsc4I CCNNNNNNNGG 5 cut(s) 398, 591, 612, 720, 912
Bse118I RCCGGY 4 cut(s) 325, 419, 713, 879
Bse1I ACTGG 3 cut(s) 203, 314, 1649
Bse21I CCTNAGG 1 cut(s) 488
Bse8I GATNNNNATC 1 cut(s) 524
BseDI CCNNGG 1 cut(s) 606
BseGI GGATG 2 cut(s) 1515, 1546
BseJI GATNNNNATC 1 cut(s) 524
BseLI CCNNNNNNNGG 5 cut(s) 398, 591, 612, 720, 912
BseMII CTCAG 2 cut(s) 455, 1254
BseNI ACTGG 3 cut(s) 203, 314, 1649
BseSI GKGCMC 1 cut(s) 283
BshFI GGCC 2 cut(s) 281, 1114
BshTI ACCGGT 3 cut(s) 419, 713, 879
BsiHKAI GWGCWC 3 cut(s) 1080, 1454, 1771
BslI CCNNNNNNNGG 5 cut(s) 398, 591, 612, 720, 912
BsmAI GTCTC 2 cut(s) 224, 1727
BsmI GAATGC 2 cut(s) 554, 1675
BsnI GGCC 2 cut(s) 281, 1114
Bso31I GGTCTC 1 cut(s) 224
Bsp120I GGGCCC 1 cut(s) 279
Bsp1286I GDGCHC 4 cut(s) 283, 1080, 1454, 1771
Bsp143I GATC 7 cut(s) 190, 865, 1273, 1356, 1563, 1585, 1741
Bsp1720I GCTNAGC 1 cut(s) 684
BspACI CCGC 3 cut(s) 257, 573, 1335
BspANI GGCC 2 cut(s) 281, 1114
BspCNI CTCAG 2 cut(s) 454, 1255
BspHI TCATGA 1 cut(s) 1165
BspLI GGNNCC 2 cut(s) 281, 471
BspPI GGATC 4 cut(s) 185, 1268, 1571, 1749
BspTI CTTAAG 1 cut(s) 869
BspTNI GGTCTC 1 cut(s) 224
BsrFI RCCGGY 4 cut(s) 325, 419, 713, 879
BsrI ACTGG 3 cut(s) 203, 314, 1649
BssAI RCCGGY 4 cut(s) 325, 419, 713, 879
BssECI CCNNGG 1 cut(s) 606
BssMI GATC 7 cut(s) 190, 865, 1273, 1356, 1563, 1585, 1741
BssNAI GTATAC 1 cut(s) 208
Bst1107I GTATAC 1 cut(s) 208
Bst6I CTCTTC 3 cut(s) 236, 1116, 1377
BstAFI CTTAAG 1 cut(s) 869
BstBAI YACGTR 1 cut(s) 1287
BstDEI CTNAG 6 cut(s) 332, 441, 488, 684, 1263, 1571
BstDSI CCRYGG 1 cut(s) 606
BstF5I GGATG 2 cut(s) 1515, 1546
BstKTI GATC 7 cut(s) 193, 868, 1276, 1359, 1566, 1588, 1744
BstMAI GTCTC 2 cut(s) 224, 1727
BstMBI GATC 7 cut(s) 190, 865, 1273, 1356, 1563, 1585, 1741
BstNSI RCATGY 1 cut(s) 809
BstPAI GACNNNNGTC 1 cut(s) 1468
BstSCI CCNGG 4 cut(s) 391, 690, 741, 833
BstSFI CTRYAG 1 cut(s) 649
BstSLI GKGCMC 1 cut(s) 283
BstV2I GAAGAC 3 cut(s) 1046, 1390, 1402
BstX2I RGATCY 1 cut(s) 1563
BstXI CCANNNNNNTGG 1 cut(s) 180
BstYI RGATCY 1 cut(s) 1563
BstZ17I GTATAC 1 cut(s) 208
Bsu36I CCTNAGG 1 cut(s) 488
BsuI GTATCC 1 cut(s) 1656
BsuRI GGCC 2 cut(s) 281, 1114
BtgI CCRYGG 1 cut(s) 606
BtsCI GGATG 2 cut(s) 1515, 1546
BtsIMutI CAGTG 2 cut(s) 138, 1656
CciI TCATGA 1 cut(s) 1165
Cfr10I RCCGGY 4 cut(s) 325, 419, 713, 879
Cfr13I GGNCC 9 cut(s) 200, 279, 280, 369, 401, 469, 791, 877, 1343
Csp6I GTAC 6 cut(s) 44, 363, 389, 838, 883, 1387
CspAI ACCGGT 3 cut(s) 419, 713, 879
CviAII CATG 4 cut(s) 366, 806, 1166, 1447
CviQI GTAC 6 cut(s) 44, 363, 389, 838, 883, 1387
DdeI CTNAG 6 cut(s) 332, 441, 488, 684, 1263, 1571
DpnI GATC 7 cut(s) 192, 867, 1275, 1358, 1565, 1587, 1743
DpnII GATC 7 cut(s) 190, 865, 1273, 1356, 1563, 1585, 1741
DrdI GACNNNNNNGTC 1 cut(s) 1350
DseDI GACNNNNNNGTC 1 cut(s) 1350
Eam1104I CTCTTC 3 cut(s) 236, 1116, 1377
EarI CTCTTC 3 cut(s) 236, 1116, 1377
Ecl136II GAGCTC 1 cut(s) 1769
Eco24I GRGCYC 2 cut(s) 283, 1771
Eco31I GGTCTC 1 cut(s) 224
Eco47I GGWCC 7 cut(s) 200, 369, 401, 469, 791, 877, 1343
Eco53kI GAGCTC 1 cut(s) 1769
Eco57I CTGAAG 1 cut(s) 1040
Eco72I CACGTG 1 cut(s) 1287
Eco81I CCTNAGG 1 cut(s) 488
EcoICRI GAGCTC 1 cut(s) 1769
EcoO109I RGGNCCY 2 cut(s) 469, 1343
EcoT22I ATGCAT 1 cut(s) 88
EcoT38I GRGCYC 2 cut(s) 283, 1771
FaeI CATG 4 cut(s) 369, 809, 1169, 1450
FalI AAGNNNNNCTT 4 cut(s) 806, 838, 947, 979
FatI CATG 4 cut(s) 365, 805, 1165, 1446
FbaI TGATCA 2 cut(s) 1356, 1585
FblI GTMKAC 1 cut(s) 207
FokI GGATG 2 cut(s) 1522, 1553
FriOI GRGCYC 2 cut(s) 283, 1771
FspBI CTAG 3 cut(s) 153, 1253, 1461
HaeIII GGCC 2 cut(s) 281, 1114
Hin1II CATG 4 cut(s) 369, 809, 1169, 1450
HincII GTYRAC 4 cut(s) 307, 427, 711, 1184
HindII GTYRAC 4 cut(s) 307, 427, 711, 1184
HpaI GTTAAC 2 cut(s) 307, 427
HphI GGTGA 2 cut(s) 1072, 1639
Hpy166II GTNNAC 8 cut(s) 208, 307, 427, 697, 711, 1184, 1389, 1493
Hpy188III TCNNGA 8 cut(s) 320, 731, 905, 1166, 1174, 1253, 1373, 1638
Hpy8I GTNNAC 8 cut(s) 208, 307, 427, 697, 711, 1184, 1389, 1493
Hpy99I CGWCG 3 cut(s) 791, 1471, 1474
HpyAV CCTTC 5 cut(s) 348, 808, 868, 1033, 1554
HpyCH4IV ACGT 4 cut(s) 786, 1149, 1235, 1286
HpyCH4V TGCA 7 cut(s) 86, 112, 448, 458, 524, 1673, 1753
HpyF3I CTNAG 6 cut(s) 332, 441, 488, 684, 1263, 1571
HpySE526I ACGT 4 cut(s) 786, 1149, 1235, 1286
Hsp92II CATG 4 cut(s) 369, 809, 1169, 1450
Ksp22I TGATCA 2 cut(s) 1356, 1585
KspAI GTTAAC 2 cut(s) 307, 427
Kzo9I GATC 7 cut(s) 190, 865, 1273, 1356, 1563, 1585, 1741
LmnI GCTCC 4 cut(s) 1083, 1457, 1610, 1766
LweI GCATC 2 cut(s) 73, 1447
MaeI CTAG 3 cut(s) 153, 1253, 1461
MaeII ACGT 4 cut(s) 786, 1149, 1235, 1286
MaeIII GTNAC 5 cut(s) 560, 1142, 1231, 1307, 1708
MalI GATC 7 cut(s) 192, 867, 1275, 1358, 1565, 1587, 1743
MboI GATC 7 cut(s) 190, 865, 1273, 1356, 1563, 1585, 1741
MflI RGATCY 1 cut(s) 1563
MhlI GDGCHC 4 cut(s) 283, 1080, 1454, 1771
MluCI AATT 6 cut(s) 52, 78, 107, 636, 940, 1301
MlyI GAGTC 5 cut(s) 137, 1139, 1363, 1416, 1729
MmeI TCCRAC 1 cut(s) 1225
Mph1103I ATGCAT 1 cut(s) 88
MslI CAYNNNNRTG 2 cut(s) 1175, 1680
MspCI CTTAAG 1 cut(s) 869
MspR9I CCNGG 4 cut(s) 393, 692, 743, 835
Mva1269I GAATGC 2 cut(s) 554, 1675
NciI CCSGG 4 cut(s) 393, 692, 743, 835
NdeII GATC 7 cut(s) 190, 865, 1273, 1356, 1563, 1585, 1741
NlaIII CATG 4 cut(s) 369, 809, 1169, 1450
NlaIV GGNNCC 2 cut(s) 281, 471
NmeAIII GCCGAG 1 cut(s) 683
NmuCI GTSAC 2 cut(s) 560, 1708
NsiI ATGCAT 1 cut(s) 88
NspI RCATGY 1 cut(s) 809
PagI TCATGA 1 cut(s) 1165
PctI GAATGC 2 cut(s) 554, 1675
PfeI GAWTC 8 cut(s) 119, 136, 927, 987, 1010, 1063, 1085, 1203
PinAI ACCGGT 3 cut(s) 419, 713, 879
PleI GAGTC 5 cut(s) 136, 1138, 1363, 1415, 1728
PmaCI CACGTG 1 cut(s) 1287
PmlI CACGTG 1 cut(s) 1287
PpsI GAGTC 5 cut(s) 136, 1138, 1363, 1415, 1728
Ppu21I YACGTR 1 cut(s) 1287
PpuMI RGGWCCY 2 cut(s) 469, 1343
PshAI GACNNNNGTC 1 cut(s) 1468
Psp124BI GAGCTC 1 cut(s) 1771
Psp1406I AACGTT 1 cut(s) 1235
Psp5II RGGWCCY 2 cut(s) 469, 1343
PspCI CACGTG 1 cut(s) 1287
PspN4I GGNNCC 2 cut(s) 281, 471
PspOMI GGGCCC 1 cut(s) 279
PspPI GGNCC 9 cut(s) 200, 279, 280, 369, 401, 469, 791, 877, 1343
PspPPI RGGWCCY 2 cut(s) 469, 1343
PsuI RGATCY 1 cut(s) 1563
RsaI GTAC 6 cut(s) 45, 364, 390, 839, 884, 1388
RsaNI GTAC 6 cut(s) 44, 363, 389, 838, 883, 1387
RseI CAYNNNNRTG 2 cut(s) 1175, 1680
SacI GAGCTC 1 cut(s) 1771
Sau3AI GATC 7 cut(s) 190, 865, 1273, 1356, 1563, 1585, 1741
Sau96I GGNCC 9 cut(s) 200, 279, 280, 369, 401, 469, 791, 877, 1343
SchI GAGTC 5 cut(s) 137, 1139, 1363, 1416, 1729
ScrFI CCNGG 4 cut(s) 393, 692, 743, 835
SduI GDGCHC 4 cut(s) 283, 1080, 1454, 1771
SfaNI GCATC 2 cut(s) 73, 1447
SfcI CTRYAG 1 cut(s) 649
SinI GGWCC 7 cut(s) 200, 369, 401, 469, 791, 877, 1343
SmiMI CAYNNNNRTG 2 cut(s) 1175, 1680
SmlI CTYRAG 2 cut(s) 869, 1215
SmoI CTYRAG 2 cut(s) 869, 1215
Sse9I AATT 6 cut(s) 52, 78, 107, 636, 940, 1301
SsiI CCGC 3 cut(s) 257, 573, 1335
SspI AATATT 1 cut(s) 271
SspMI CTAG 3 cut(s) 153, 1253, 1461
SstI GAGCTC 1 cut(s) 1771
StyD4I CCNGG 4 cut(s) 391, 690, 741, 833
TaiI ACGT 4 cut(s) 789, 1152, 1238, 1289
TaqI TCGA 5 cut(s) 126, 351, 930, 1272, 1322
TaqII GACCGA 2 cut(s) 418, 779
TasI AATT 6 cut(s) 52, 78, 107, 636, 940, 1301
TatI WGTACW 2 cut(s) 43, 1386
TfiI GAWTC 8 cut(s) 119, 136, 927, 987, 1010, 1063, 1085, 1203
TscAI CASTG 2 cut(s) 138, 1656
TseFI GTSAC 2 cut(s) 560, 1708
Tsp45I GTSAC 2 cut(s) 560, 1708
TspDTI ATGAA 5 cut(s) 80, 557, 1023, 1172, 1772
TspGWI ACGGA 1 cut(s) 548
TspRI CASTG 2 cut(s) 138, 1656
Vha464I CTTAAG 1 cut(s) 869
VpaK11BI GGWCC 7 cut(s) 200, 369, 401, 469, 791, 877, 1343
XbaI TCTAGA 1 cut(s) 1252
XceI RCATGY 1 cut(s) 809
XmiI GTMKAC 1 cut(s) 207
XspI CTAG 3 cut(s) 153, 1253, 1461
Zsp2I ATGCAT 1 cut(s) 88
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.