Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0002984

Physical Location & Seq

Genomic Coordinates Forward (+)

18283340 .. 18287282

Gene Structure 3943 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG191100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1545 bp

ATGTATTTTGGGGGTCTCTACCACTTTTTCTATCAGTACAATCCCAAAGGAGCTGTTTGGGGAAACATTGTATGGGCCCATTCAGTCTCTAAGGATCTGATCAATTGGCAAGCCCTTGAACCCGCCATATACCCATCCAAGCCCTTTGACATAAACGGGTGCTGGTCCGGATCCGCCACCCTTCTCCCGGGAAACAAGCCCATCATCCTCTACACCGGACTTGACCCGGAAAAGCGCCAGGTCCAAAACTACGCCTTGCCCGCAAATGTTTCCGACCCATATCTACGCAAATGGGTTAAGCCCGACAACAACCCGCTAGTGGTTCCGGATGCAAGTATGAATGCATCCCAGTTCCGTGACCCGACAACCGCTTGGTGGAGCAATGGGCACTGGAAGATGTTGGTGGGTGGCAAGAGAAAGCATAGAGGAATGGCTCATTTGTATAGGAGCAAGGATTTTGTTTATTGGGTCAAGGCCCAGCACCCGCTTCACTCTGCCCCGAAAACGGGTATGTGGGAATGCCCGGATTTTTACCCGGTTTCATTGAAGGGCAAGGTAGGGTTGGAGACATCAAAAGATGGTGGGAATGTGAAGCATGTTTTGAAAGTGAGCCTTGATGAGACTCGGTATGACTACTACACTGTTGGAAAATACTTTCCTAAACAAGATAGGTATGTTCCTGATAAGGAATTGGTGGATGGTTGGGCTGGATTGAGATATGATTATGGGAACTTCTATGCTTCCAAAACTTTCTTTGATCCTGCAAAGAATAGAAGAATTTTGTGGGGCTGGGCTAATGAGTCTGATACTCCTAACAATGATGTTGAAAAGGGATGGGCTGGAGTTCAGGCAATCCCAAGGACTGTGTGGCTGAGTCCTGATGGGAAACAATTGTTACAATGGCCTGTTGAAGAATTGGAAACTTTAAGGGGACAAAAGGTCCAGATGAAGAATCAAAATCTCAAAGTGGGAGATCATGTTGAAGTTAAAGGAATACATGCTGCCCAGGCCGACGTTGAAGTTATATTCTCTTTCAAGAGCTTGCACAAAGCAGAGAAGTTTGACCCTAAATGGTCAAACCTTGATGCCCAAGCAATATGTGGGCTAACGGGTTCAAAAATTGGAGGTGGCATTGGCCCATTTGGGCTATTGACTTTAGCTTCACAAAACCTAGAGGAATTCACTCCTGTCTTCTTTAGGGTGTTCAAAACTCAAGGCAATAAGCATAAGGTTCTCCTGTGCTCTGATGCAAGAAGTTCCTCTTTGCAGGATAATCTGTACAAACCATCATTTGCTGGTTTTGTAGATGTAGACTTATCTGGTAAGAAGCTCTCCCTCAGGAGTTTGATTGATCATTCTGTTGTTGAGAGTTTTGGAGCTGGAGGAAAAACATGCATTACTTCTAGGGTTTACCCCACTCTAGCTGTTGACAATAAAGCTCACTTGTATGTGTTCAACAATGGGACTGAGGCTGTCACTATTGAGAGTCTCGATGCGTGGACTATGAATGCTCCTAAGTTGATGAACCAATATTCCCAGGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005623 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0030312 GO:0033036 GO:0042742 GO:0043207 GO:0044464 GO:0050832 GO:0050896 GO:0051179 GO:0051704 GO:0051707 GO:0052575 GO:0052576 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

ko00052 ko00500 ko01100 map00052 map00500 map01100

Pfam Domains

Protein Families

Glyco_hydro_32C Glyco_hydro_32N

Protein Analysis

514

Amino Acids

57.9

Weight (kDa)

9.03

Isoelectric Point (pI)

30.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_32N	PF00251	1 - 302	2.8e-94	Glycosyl hydrolases family 32 N-terminal domain
Glyco_hydro_32C	PF08244	305 - 500	2.6e-23	Glycosyl hydrolases family 32 C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002984)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36190 AT3G52600 AT3G52600 AT3G52600
fragaria_vesca	FvH4_6g19270 FvH4_6g19270 FvH4_6g19271
malus_domestica	MD12G1028200.v1.1 MD14G1028500.v1.1
prunus_persica	Prupe.7G103100_v2.0.a1 Prupe.7G103200_v2.0.a1 Prupe.7G103300_v2.0.a1 Prupe.7G103400_v2.0.a1 Prupe.7G103400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0474371 RchiOBHm_Chr3g0474381
rosa_laevigata	RLG00000023930
rosa_multiflora	Rmu_co8392863.1_g000001 Rmu_co8415991.1_g000001 Rmu_co8444851.1_g000001 Rmu_sc0004507.1_g000003 Rmu_sc0004507.1_g000004
rosa_roxburghii	Rroxscaffold_6G00407310 Rroxscaffold_6G00407320
rosa_rugosa	Rorug03G0140200 Rorug03G0140300 Rorug03G0140400 Rorug03G0140500
rosa_samantha	Rh3AG191100 Rh3AG191200 Rh3BG220300 Rh3BG220400 Rh3CG215600 Rh3CG215700 Rh3DG216000 Rh3DG216100
rosa_wichuraiana	Rw3G017430 Rw3G017440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1311
AccIII	TCCGGA	2 cut(s)	167, 325
AciI	CCGC	6 cut(s)	123, 174, 261, 314, 369, 485
AclWI	GGATC	4 cut(s)	102, 165, 178, 752
AcsI	RAATTY	2 cut(s)	777, 1178
AfaI	GTAC	2 cut(s)	38, 1280
AfiI	CCNNNNNNNGG	5 cut(s)	187, 319, 375, 505, 506
AhdI	GACNNNNNGTC	1 cut(s)	938
AjnI	CCWGG	3 cut(s)	237, 1005, 1536
AloI	GAACNNNNNNTCC	1 cut(s)	1517
AluBI	AGCT	7 cut(s)	53, 1041, 1160, 1330, 1379, 1424, 1439
AluI	AGCT	7 cut(s)	53, 1041, 1160, 1330, 1379, 1424, 1439
Alw21I	GWGCWC	1 cut(s)	1244
Alw26I	GTCTC	5 cut(s)	20, 91, 560, 614, 1493
AlwI	GGATC	4 cut(s)	102, 165, 178, 752
Ama87I	CYCGRG	1 cut(s)	187
Aor13HI	TCCGGA	2 cut(s)	167, 325
AoxI	GGCC	5 cut(s)	75, 474, 902, 1008, 1135
ApaI	GGGCCC	1 cut(s)	79
ApeKI	GCWGC	1 cut(s)	1001
ApoI	RAATTY	2 cut(s)	777, 1178
AspLEI	GCGC	1 cut(s)	237
AspS9I	GGNCC	7 cut(s)	75, 76, 165, 241, 475, 940, 1136
AsuC2I	CCSGG	5 cut(s)	188, 189, 227, 524, 536
AvaI	CYCGRG	1 cut(s)	187
AvaII	GGWCC	3 cut(s)	165, 241, 940
AxyI	CCTNAGG	1 cut(s)	1337
BaeGI	GKGCMC	2 cut(s)	79, 390
BamHI	GGATCC	1 cut(s)	170
BanII	GRGCYC	1 cut(s)	79
BbsI	GAAGAC	1 cut(s)	1183
Bbv12I	GWGCWC	1 cut(s)	1244
BbvI	GCAGC	1 cut(s)	988
BccI	CCATC	7 cut(s)	142, 209, 572, 692, 828, 875, 1294
BciT130I	CCWGG	3 cut(s)	239, 1007, 1538
BclI	TGATCA	2 cut(s)	99, 1351
BcnI	CCSGG	5 cut(s)	188, 189, 227, 524, 536
BcoDI	GTCTC	5 cut(s)	20, 91, 560, 614, 1493
BfaI	CTAG	5 cut(s)	317, 1172, 1404, 1421, 1543
BfoI	RGCGCY	1 cut(s)	238
BisI	GCNGC	1 cut(s)	1002
BlsI	GCNGC	1 cut(s)	1003
Bme1390I	CCNGG	8 cut(s)	188, 189, 227, 239, 524, 536, 1007, 1538
Bme18I	GGWCC	3 cut(s)	165, 241, 940
BmeRI	GACNNNNNGTC	1 cut(s)	938
BmeT110I	CYCGRG	1 cut(s)	187
BmgT120I	GGNCC	7 cut(s)	75, 76, 165, 241, 475, 940, 1136
BmiI	GGNNCC	3 cut(s)	77, 172, 324
BmrFI	CCNGG	8 cut(s)	188, 189, 227, 239, 524, 536, 1007, 1538
BmrI	ACTGGG	1 cut(s)	343
BmsI	GCATC	5 cut(s)	319, 353, 1075, 1237, 1483
BmuI	ACTGGG	1 cut(s)	343
BpiI	GAAGAC	1 cut(s)	1183
BpmI	CTGGAG	2 cut(s)	861, 1401
BpuEI	CTTGAG	1 cut(s)	1197
BpuMI	CCSGG	5 cut(s)	188, 189, 227, 524, 536
BsaI	GGTCTC	1 cut(s)	20
BsaJI	CCNNGG	4 cut(s)	187, 857, 1005, 1536
BsaWI	WCCGGW	3 cut(s)	167, 215, 325
BsaXI	ACNNNNNCTCC	2 cut(s)	963, 993
Bsc4I	CCNNNNNNNGG	5 cut(s)	187, 319, 375, 505, 506
Bse1I	ACTGG	2 cut(s)	349, 395
Bse21I	CCTNAGG	1 cut(s)	1337
Bse3DI	GCAATG	1 cut(s)	388
BseAI	TCCGGA	2 cut(s)	167, 325
BseBI	CCWGG	3 cut(s)	239, 1007, 1538
BseDI	CCNNGG	4 cut(s)	187, 857, 1005, 1536
BseGI	GGATG	6 cut(s)	134, 204, 334, 344, 703, 839
BseLI	CCNNNNNNNGG	5 cut(s)	187, 319, 375, 505, 506
BseMI	GCAATG	1 cut(s)	388
BseMII	CTCAG	3 cut(s)	863, 1351, 1458
BseNI	ACTGG	2 cut(s)	349, 395
BseSI	GKGCMC	2 cut(s)	79, 390
BseXI	GCAGC	1 cut(s)	988
BseYI	CCCAGC	2 cut(s)	477, 789
BshFI	GGCC	5 cut(s)	77, 476, 904, 1010, 1137
BsiHKAI	GWGCWC	1 cut(s)	1244
BsiHKCI	CYCGRG	1 cut(s)	187
BsiSI	CCGG	7 cut(s)	168, 188, 216, 227, 326, 524, 536
BslFI	GGGAC	2 cut(s)	945, 1477
BslI	CCNNNNNNNGG	5 cut(s)	187, 319, 375, 505, 506
BsmAI	GTCTC	5 cut(s)	20, 91, 560, 614, 1493
BsmFI	GGGAC	2 cut(s)	945, 1477
BsmI	GAATGC	3 cut(s)	346, 524, 1513
BsnI	GGCC	5 cut(s)	77, 476, 904, 1010, 1137
Bso31I	GGTCTC	1 cut(s)	20
BsoBI	CYCGRG	1 cut(s)	187
Bsp120I	GGGCCC	1 cut(s)	75
Bsp1286I	GDGCHC	3 cut(s)	79, 390, 1244
Bsp13I	TCCGGA	2 cut(s)	167, 325
Bsp1407I	TGTACA	1 cut(s)	1278
Bsp143I	GATC	6 cut(s)	94, 99, 170, 757, 973, 1351
BspACI	CCGC	6 cut(s)	123, 174, 261, 314, 369, 485
BspANI	GGCC	5 cut(s)	77, 476, 904, 1010, 1137
BspCNI	CTCAG	3 cut(s)	864, 1350, 1459
BspEI	TCCGGA	2 cut(s)	167, 325
BspLI	GGNNCC	3 cut(s)	77, 172, 324
BspPI	GGATC	4 cut(s)	102, 165, 178, 752
BspTNI	GGTCTC	1 cut(s)	20
BsrDI	GCAATG	1 cut(s)	388
BsrGI	TGTACA	1 cut(s)	1278
BsrI	ACTGG	2 cut(s)	349, 395
BssECI	CCNNGG	4 cut(s)	187, 857, 1005, 1536
BssMI	GATC	6 cut(s)	94, 99, 170, 757, 973, 1351
BssT1I	CCWWGG	1 cut(s)	857
Bst2UI	CCWGG	3 cut(s)	239, 1007, 1538
Bst4CI	ACNGT	2 cut(s)	643, 865
BstAUI	TGTACA	1 cut(s)	1278
BstC8I	GCNNGC	3 cut(s)	111, 261, 1043
BstDEI	CTNAG	5 cut(s)	90, 872, 1337, 1467, 1515
BstF5I	GGATG	6 cut(s)	134, 204, 334, 344, 703, 839
BstH2I	RGCGCY	1 cut(s)	238
BstHHI	GCGC	1 cut(s)	237
BstKTI	GATC	6 cut(s)	97, 102, 173, 760, 976, 1354
BstMAI	GTCTC	5 cut(s)	20, 91, 560, 614, 1493
BstMBI	GATC	6 cut(s)	94, 99, 170, 757, 973, 1351
BstMWI	GCNNNNNNNGC	2 cut(s)	260, 1007
BstNI	CCWGG	3 cut(s)	239, 1007, 1538
BstNSI	RCATGY	3 cut(s)	599, 1001, 1395
BstSCI	CCNGG	8 cut(s)	186, 187, 225, 237, 522, 534, 1005, 1536
BstSLI	GKGCMC	2 cut(s)	79, 390
BstV1I	GCAGC	1 cut(s)	988
BstV2I	GAAGAC	1 cut(s)	1183
BstX2I	RGATCY	2 cut(s)	94, 170
BstYI	RGATCY	2 cut(s)	94, 170
Bsu36I	CCTNAGG	1 cut(s)	1337
BsuRI	GGCC	5 cut(s)	77, 476, 904, 1010, 1137
BtsCI	GGATG	6 cut(s)	134, 204, 334, 344, 703, 839
BtsIMutI	CAGTG	2 cut(s)	388, 639
Cac8I	GCNNGC	3 cut(s)	111, 261, 1043
CfoI	GCGC	1 cut(s)	237
Cfr13I	GGNCC	7 cut(s)	75, 76, 165, 241, 475, 940, 1136
Cfr9I	CCCGGG	1 cut(s)	187
Csp6I	GTAC	2 cut(s)	37, 1279
CviAII	CATG	4 cut(s)	596, 977, 998, 1392
CviQI	GTAC	2 cut(s)	37, 1279
DdeI	CTNAG	5 cut(s)	90, 872, 1337, 1467, 1515
DpnI	GATC	6 cut(s)	96, 101, 172, 759, 975, 1353
DpnII	GATC	6 cut(s)	94, 99, 170, 757, 973, 1351
DriI	GACNNNNNGTC	1 cut(s)	938
Eam1105I	GACNNNNNGTC	1 cut(s)	938
EciI	GGCGGA	1 cut(s)	163
Eco130I	CCWWGG	1 cut(s)	857
Eco24I	GRGCYC	1 cut(s)	79
Eco31I	GGTCTC	1 cut(s)	20
Eco47I	GGWCC	3 cut(s)	165, 241, 940
Eco81I	CCTNAGG	1 cut(s)	1337
Eco88I	CYCGRG	1 cut(s)	187
EcoRI	GAATTC	1 cut(s)	1178
EcoRII	CCWGG	3 cut(s)	237, 1005, 1536
EcoT14I	CCWWGG	1 cut(s)	857
EcoT22I	ATGCAT	2 cut(s)	346, 1397
EcoT38I	GRGCYC	1 cut(s)	79
ErhI	CCWWGG	1 cut(s)	857
FaeI	CATG	4 cut(s)	599, 980, 1001, 1395
FalI	AAGNNNNNCTT	4 cut(s)	597, 629, 1246, 1278
FaqI	GGGAC	2 cut(s)	945, 1477
FatI	CATG	4 cut(s)	595, 976, 997, 1391
FauI	CCCGC	4 cut(s)	130, 268, 321, 492
FbaI	TGATCA	2 cut(s)	99, 1351
FblI	GTMKAC	1 cut(s)	1311
Fnu4HI	GCNGC	1 cut(s)	1002
FokI	GGATG	6 cut(s)	121, 191, 331, 341, 710, 846
FriOI	GRGCYC	1 cut(s)	79
Fsp4HI	GCNGC	1 cut(s)	1002
FspBI	CTAG	5 cut(s)	317, 1172, 1404, 1421, 1543
GlaI	GCGC	1 cut(s)	236
GluI	GCNGC	1 cut(s)	1002
GsaI	CCCAGC	2 cut(s)	481, 793
GsuI	CTGGAG	2 cut(s)	861, 1401
HaeII	RGCGCY	1 cut(s)	238
HaeIII	GGCC	5 cut(s)	77, 476, 904, 1010, 1137
HapII	CCGG	7 cut(s)	168, 188, 216, 227, 326, 524, 536
HhaI	GCGC	1 cut(s)	237
Hin1II	CATG	4 cut(s)	599, 980, 1001, 1395
Hin6I	GCGC	1 cut(s)	235
HinP1I	GCGC	1 cut(s)	235
HincII	GTYRAC	1 cut(s)	1429
HindII	GTYRAC	1 cut(s)	1429
HinfI	GANTC	5 cut(s)	622, 800, 874, 952, 1486
HpaII	CCGG	7 cut(s)	168, 188, 216, 227, 326, 524, 536
Hpy166II	GTNNAC	4 cut(s)	1312, 1411, 1429, 1500
Hpy188I	TCNGA	4 cut(s)	99, 274, 805, 1246
Hpy188III	TCNNGA	8 cut(s)	168, 326, 680, 878, 943, 1036, 1339, 1490
Hpy8I	GTNNAC	4 cut(s)	1312, 1411, 1429, 1500
Hpy99I	CGWCG	1 cut(s)	1016
HpyAV	CCTTC	2 cut(s)	191, 541
HpyCH4III	ACNGT	2 cut(s)	643, 865
HpyCH4IV	ACGT	1 cut(s)	1014
HpyCH4V	TGCA	7 cut(s)	332, 344, 764, 1045, 1250, 1267, 1395
HpyF10VI	GCNNNNNNNGC	2 cut(s)	260, 1007
HpyF3I	CTNAG	5 cut(s)	90, 872, 1337, 1467, 1515
HpySE526I	ACGT	1 cut(s)	1014
Hsp92II	CATG	4 cut(s)	599, 980, 1001, 1395
HspAI	GCGC	1 cut(s)	235
Kpn2I	TCCGGA	2 cut(s)	167, 325
Ksp22I	TGATCA	2 cut(s)	99, 1351
Kzo9I	GATC	6 cut(s)	94, 99, 170, 757, 973, 1351
LmnI	GCTCC	5 cut(s)	50, 378, 447, 1376, 1516
Lsp1109I	GCAGC	1 cut(s)	988
LweI	GCATC	5 cut(s)	319, 353, 1075, 1237, 1483
MaeI	CTAG	5 cut(s)	317, 1172, 1404, 1421, 1543
MaeII	ACGT	1 cut(s)	1014
MaeIII	GTNAC	3 cut(s)	356, 894, 1474
MalI	GATC	6 cut(s)	96, 101, 172, 759, 975, 1353
MboI	GATC	6 cut(s)	94, 99, 170, 757, 973, 1351
MboII	GAAGA	5 cut(s)	406, 786, 923, 961, 1183
MfeI	CAATTG	2 cut(s)	103, 890
MflI	RGATCY	2 cut(s)	94, 170
MhlI	GDGCHC	3 cut(s)	79, 390, 1244
MluCI	AATT	7 cut(s)	103, 689, 777, 890, 914, 1119, 1178
MlyI	GAGTC	4 cut(s)	616, 809, 883, 1495
MmeI	TCCRAC	3 cut(s)	297, 543, 625
MnlI	CCTC	8 cut(s)	218, 419, 1118, 1168, 1270, 1346, 1376, 1462
Mph1103I	ATGCAT	2 cut(s)	346, 1397
MroI	TCCGGA	2 cut(s)	167, 325
MseI	TTAA	3 cut(s)	297, 926, 987
MslI	CAYNNNNRTG	1 cut(s)	1446
MspI	CCGG	7 cut(s)	168, 188, 216, 227, 326, 524, 536
MspR9I	CCNGG	8 cut(s)	188, 189, 227, 239, 524, 536, 1007, 1538
MunI	CAATTG	2 cut(s)	103, 890
Mva1269I	GAATGC	3 cut(s)	346, 524, 1513
MvaI	CCWGG	3 cut(s)	239, 1007, 1538
MwoI	GCNNNNNNNGC	2 cut(s)	260, 1007
NciI	CCSGG	5 cut(s)	188, 189, 227, 524, 536
NdeII	GATC	6 cut(s)	94, 99, 170, 757, 973, 1351
NlaIII	CATG	4 cut(s)	599, 980, 1001, 1395
NlaIV	GGNNCC	3 cut(s)	77, 172, 324
NmuCI	GTSAC	2 cut(s)	356, 1474
NsiI	ATGCAT	2 cut(s)	346, 1397
NspI	RCATGY	3 cut(s)	599, 1001, 1395
PctI	GAATGC	3 cut(s)	346, 524, 1513
PfeI	GAWTC	1 cut(s)	952
PkrI	GCNGC	1 cut(s)	1003
PleI	GAGTC	4 cut(s)	616, 808, 882, 1494
PpsI	GAGTC	4 cut(s)	616, 808, 882, 1494
Psp6I	CCWGG	3 cut(s)	237, 1005, 1536
PspFI	CCCAGC	2 cut(s)	477, 789
PspGI	CCWGG	3 cut(s)	237, 1005, 1536
PspN4I	GGNNCC	3 cut(s)	77, 172, 324
PspOMI	GGGCCC	1 cut(s)	75
PspPI	GGNCC	7 cut(s)	75, 76, 165, 241, 475, 940, 1136
PsuI	RGATCY	2 cut(s)	94, 170
RsaI	GTAC	2 cut(s)	38, 1280
RsaNI	GTAC	2 cut(s)	37, 1279
RseI	CAYNNNNRTG	1 cut(s)	1446
SaqAI	TTAA	3 cut(s)	297, 926, 987
SatI	GCNGC	1 cut(s)	1002
Sau3AI	GATC	6 cut(s)	94, 99, 170, 757, 973, 1351
Sau96I	GGNCC	7 cut(s)	75, 76, 165, 241, 475, 940, 1136
SchI	GAGTC	4 cut(s)	616, 809, 883, 1495
ScrFI	CCNGG	8 cut(s)	188, 189, 227, 239, 524, 536, 1007, 1538
SduI	GDGCHC	3 cut(s)	79, 390, 1244
SfaNI	GCATC	5 cut(s)	319, 353, 1075, 1237, 1483
SinI	GGWCC	3 cut(s)	165, 241, 940
SmaI	CCCGGG	1 cut(s)	189
SmiMI	CAYNNNNRTG	1 cut(s)	1446
SmlI	CTYRAG	1 cut(s)	1212
SmoI	CTYRAG	1 cut(s)	1212
Sse9I	AATT	7 cut(s)	103, 689, 777, 890, 914, 1119, 1178
SsiI	CCGC	6 cut(s)	123, 174, 261, 314, 369, 485
SspI	AATATT	1 cut(s)	1532
SspMI	CTAG	5 cut(s)	317, 1172, 1404, 1421, 1543
StyD4I	CCNGG	8 cut(s)	186, 187, 225, 237, 522, 534, 1005, 1536
StyI	CCWWGG	1 cut(s)	857
TaaI	ACNGT	2 cut(s)	643, 865
TaiI	ACGT	1 cut(s)	1017
TaqI	TCGA	1 cut(s)	1491
TasI	AATT	7 cut(s)	103, 689, 777, 890, 914, 1119, 1178
TatI	WGTACW	2 cut(s)	36, 1278
TfiI	GAWTC	1 cut(s)	952
Tru1I	TTAA	3 cut(s)	297, 926, 987
Tru9I	TTAA	3 cut(s)	297, 926, 987
TscAI	CASTG	2 cut(s)	395, 646
TseFI	GTSAC	2 cut(s)	356, 1474
TseI	GCWGC	1 cut(s)	1001
Tsp45I	GTSAC	2 cut(s)	356, 1474
TspDTI	ATGAA	5 cut(s)	353, 531, 962, 1520, 1538
TspGWI	ACGGA	1 cut(s)	344
TspMI	CCCGGG	1 cut(s)	187
TspRI	CASTG	2 cut(s)	395, 646
VpaK11BI	GGWCC	3 cut(s)	165, 241, 940
XapI	RAATTY	2 cut(s)	777, 1178
XceI	RCATGY	3 cut(s)	599, 1001, 1395
XcmI	CCANNNNNNNNNTGG	2 cut(s)	864, 1097
XmaI	CCCGGG	1 cut(s)	187
XmiI	GTMKAC	1 cut(s)	1311
XspI	CTAG	5 cut(s)	317, 1172, 1404, 1421, 1543
Zsp2I	ATGCAT	2 cut(s)	346, 1397

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.