Rmu_sc0004507.1_g000004

Belongs to the glycosyl hydrolase 32 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004507.1
Physical Location & Seq
Reverse (-)
9109 .. 11893
2785 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004507.1_g000004.1.cds

Sequence Viewer

Length: 1581 bp
atgaacccctattccaccatcggtggagccgtggaggcaattggacctatgtattttgggggtctctaccactttttctatcagtacaatcccaagggagctgtttggggaaacattgtatgggcccattcagtctctaaggatctgatcaattggcaagcccttgaacccgccatatacccatccaagccctttgacataaacgggtgctggtccggatccgccacccttctcccaggcaacaagcccatcatcctctacaccggacttgacccggaaaagcgccaggtccaaaactacgccgtgcccgcaaatgtttccgacccatatctacgcaaatgggttaagcccgacaacaacccgctagtggttccggatgcaagtatgaatgcatcccagttccgtgacccgacaaccgcttggtggagcaatgggcactggaagatgttggtgggtggcaagagaaagcatagaggaatggctcatttgtataggagcaaggattttgtttattgggtcaaggcccagcacccgcttcactctgccccgaaaacgggtatgtgggaatgcccagatttttacccggtttcattgaagggcaaggtagggttggacacatcaaaagatggtgggaatgtgaagcatgttttgaaagtgagccttgacgagactaggtatgactactacactgttggaaaatactttcctaaacaagataggtatgttcctgataaggaattggtggatggttgggctggactgagatatgattatgggaacttctatgcttccaaaactttctttgatcctgcaaagaatagaagaattttgtggggctgggctaatgagtctgatactcctaacaatgatgttgaaaagggatgggctggagttcaggcaatcccaaggactgtgtggctgagtcctgatgggaaacaattgttacaatggcctgttgaagaattggaaactttaaggggacaaaaggtccagatgaagaatcaaaatctcaaagtgggagatcatgttgaagttaaaggaatacatgctgctcaggccgatgttgaaattatattctctttcaagagctcggacaaagcagagaagtttgaccctaaatggtcaaaccttgatgcccaagcaatatgtgggctaacgggttcaaaaattggaggtggcatcggcccatttgggctattgactttggcttcacaaaacctagaggaattcactcctgtcttctttagggtgttcaaaactcaaggcaataagtataaggttctcctgtgctctgatgcaagaagttcctctttgcaggataatctgtacaaaccaccatttgctggttttgtagatgtagatttatctgataagaagctctccctcaggagtttgattgatcattctgttgttgagagttttggagatggaggaaaaacatgcataacttctagggtttaccccactctggctgttgacaataaagctcacttgtatgtgttcaacaatgggactgaggctgtcactattgagagtctcgatgcgtggactatgaatgctcctaagttgatgaaccaatag

Protein Analysis

526

Amino Acids

59.06

Weight (kDa)

8.72

Isoelectric Point (pI)

29.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1343
AccIII TCCGGA 2 cut(s) 215, 373
AciI CCGC 6 cut(s) 171, 222, 309, 362, 417, 533
AclWI GGATC 4 cut(s) 150, 213, 226, 800
AcsI RAATTY 2 cut(s) 825, 1226
AfaI GTAC 2 cut(s) 86, 1328
AfiI CCNNNNNNNGG 6 cut(s) 367, 423, 553, 554, 1343, 1468
AhdI GACNNNNNGTC 1 cut(s) 986
AjnI CCWGG 2 cut(s) 235, 285
AloI GAACNNNNNNTCC 1 cut(s) 28
AluBI AGCT 4 cut(s) 101, 1089, 1378, 1487
AluI AGCT 4 cut(s) 101, 1089, 1378, 1487
Alw21I GWGCWC 2 cut(s) 1091, 1292
Alw26I GTCTC 4 cut(s) 68, 139, 662, 1541
AlwI GGATC 4 cut(s) 150, 213, 226, 800
Aor13HI TCCGGA 2 cut(s) 215, 373
AoxI GGCC 5 cut(s) 123, 522, 950, 1056, 1183
ApaI GGGCCC 1 cut(s) 127
ApeKI GCWGC 1 cut(s) 1049
ApoI RAATTY 2 cut(s) 825, 1226
AspLEI GCGC 1 cut(s) 285
AspS9I GGNCC 8 cut(s) 44, 123, 124, 213, 289, 523, 988, 1184
AsuC2I CCSGG 2 cut(s) 275, 584
AvaII GGWCC 4 cut(s) 44, 213, 289, 988
AxyI CCTNAGG 1 cut(s) 1385
BaeGI GKGCMC 3 cut(s) 127, 309, 438
BamHI GGATCC 1 cut(s) 218
BanII GRGCYC 2 cut(s) 127, 1091
BbsI GAAGAC 1 cut(s) 1231
Bbv12I GWGCWC 2 cut(s) 1091, 1292
BbvI GCAGC 1 cut(s) 1036
BccI CCATC 8 cut(s) 26, 190, 257, 620, 740, 876, 923, 1421
BceAI ACGGC 2 cut(s) 14, 287
BciT130I CCWGG 2 cut(s) 237, 287
BclI TGATCA 2 cut(s) 147, 1399
BcnI CCSGG 2 cut(s) 275, 584
BcoDI GTCTC 4 cut(s) 68, 139, 662, 1541
BfaI CTAG 4 cut(s) 365, 672, 1220, 1452
BfoI RGCGCY 1 cut(s) 286
BglI GCCNNNNNGGC 1 cut(s) 35
BisI GCNGC 1 cut(s) 1050
BlsI GCNGC 1 cut(s) 1051
Bme1390I CCNGG 4 cut(s) 237, 275, 287, 584
Bme18I GGWCC 4 cut(s) 44, 213, 289, 988
BmeRI GACNNNNNGTC 1 cut(s) 986
BmgT120I GGNCC 8 cut(s) 44, 123, 124, 213, 289, 523, 988, 1184
BmiI GGNNCC 4 cut(s) 28, 125, 220, 372
BmrFI CCNGG 4 cut(s) 237, 275, 287, 584
BmrI ACTGGG 1 cut(s) 391
BmsI GCATC 6 cut(s) 367, 401, 1123, 1188, 1285, 1531
BmuI ACTGGG 1 cut(s) 391
BpiI GAAGAC 1 cut(s) 1231
BpmI CTGGAG 1 cut(s) 909
Bpu10I CCTNAGC 1 cut(s) 1053
BpuEI CTTGAG 1 cut(s) 1245
BpuMI CCSGG 2 cut(s) 275, 584
BsaI GGTCTC 1 cut(s) 68
BsaJI CCNNGG 4 cut(s) 30, 93, 235, 905
BsaWI WCCGGW 3 cut(s) 215, 263, 373
BsaXI ACNNNNNCTCC 2 cut(s) 1011, 1041
Bsc4I CCNNNNNNNGG 6 cut(s) 367, 423, 553, 554, 1343, 1468
Bse1I ACTGG 2 cut(s) 397, 443
Bse21I CCTNAGG 1 cut(s) 1385
Bse3DI GCAATG 1 cut(s) 436
BseAI TCCGGA 2 cut(s) 215, 373
BseBI CCWGG 2 cut(s) 237, 287
BseDI CCNNGG 4 cut(s) 30, 93, 235, 905
BseGI GGATG 6 cut(s) 182, 252, 382, 392, 751, 887
BseLI CCNNNNNNNGG 6 cut(s) 367, 423, 553, 554, 1343, 1468
BseMI GCAATG 1 cut(s) 436
BseMII CTCAG 5 cut(s) 752, 911, 1067, 1399, 1506
BseNI ACTGG 2 cut(s) 397, 443
BseSI GKGCMC 3 cut(s) 127, 309, 438
BseXI GCAGC 1 cut(s) 1036
BseYI CCCAGC 2 cut(s) 525, 837
BshFI GGCC 5 cut(s) 125, 524, 952, 1058, 1185
BsiHKAI GWGCWC 2 cut(s) 1091, 1292
BsiSI CCGG 5 cut(s) 216, 264, 275, 374, 584
BslFI GGGAC 2 cut(s) 993, 1525
BslI CCNNNNNNNGG 6 cut(s) 367, 423, 553, 554, 1343, 1468
BsmAI GTCTC 4 cut(s) 68, 139, 662, 1541
BsmFI GGGAC 2 cut(s) 993, 1525
BsmI GAATGC 3 cut(s) 394, 572, 1561
BsnI GGCC 5 cut(s) 125, 524, 952, 1058, 1185
Bso31I GGTCTC 1 cut(s) 68
Bsp120I GGGCCC 1 cut(s) 123
Bsp1286I GDGCHC 5 cut(s) 127, 309, 438, 1091, 1292
Bsp13I TCCGGA 2 cut(s) 215, 373
Bsp1407I TGTACA 1 cut(s) 1326
Bsp143I GATC 6 cut(s) 142, 147, 218, 805, 1021, 1399
BspACI CCGC 6 cut(s) 171, 222, 309, 362, 417, 533
BspANI GGCC 5 cut(s) 125, 524, 952, 1058, 1185
BspCNI CTCAG 5 cut(s) 753, 912, 1066, 1398, 1507
BspEI TCCGGA 2 cut(s) 215, 373
BspLI GGNNCC 4 cut(s) 28, 125, 220, 372
BspPI GGATC 4 cut(s) 150, 213, 226, 800
BspTNI GGTCTC 1 cut(s) 68
BsrDI GCAATG 1 cut(s) 436
BsrGI TGTACA 1 cut(s) 1326
BsrI ACTGG 2 cut(s) 397, 443
BssECI CCNNGG 4 cut(s) 30, 93, 235, 905
BssMI GATC 6 cut(s) 142, 147, 218, 805, 1021, 1399
BssT1I CCWWGG 2 cut(s) 93, 905
Bst2UI CCWGG 2 cut(s) 237, 287
Bst4CI ACNGT 2 cut(s) 691, 913
BstAUI TGTACA 1 cut(s) 1326
BstC8I GCNNGC 2 cut(s) 159, 309
BstDEI CTNAG 7 cut(s) 138, 761, 920, 1053, 1385, 1515, 1563
BstDSI CCRYGG 1 cut(s) 30
BstF5I GGATG 6 cut(s) 182, 252, 382, 392, 751, 887
BstH2I RGCGCY 1 cut(s) 286
BstHHI GCGC 1 cut(s) 285
BstKTI GATC 6 cut(s) 145, 150, 221, 808, 1024, 1402
BstMAI GTCTC 4 cut(s) 68, 139, 662, 1541
BstMBI GATC 6 cut(s) 142, 147, 218, 805, 1021, 1399
BstMWI GCNNNNNNNGC 3 cut(s) 35, 308, 1055
BstNI CCWGG 2 cut(s) 237, 287
BstNSI RCATGY 3 cut(s) 647, 1049, 1443
BstSCI CCNGG 4 cut(s) 235, 273, 285, 582
BstSLI GKGCMC 3 cut(s) 127, 309, 438
BstV1I GCAGC 1 cut(s) 1036
BstV2I GAAGAC 1 cut(s) 1231
BstX2I RGATCY 2 cut(s) 142, 218
BstYI RGATCY 2 cut(s) 142, 218
Bsu36I CCTNAGG 1 cut(s) 1385
BsuRI GGCC 5 cut(s) 125, 524, 952, 1058, 1185
BtgI CCRYGG 1 cut(s) 30
BtsCI GGATG 6 cut(s) 182, 252, 382, 392, 751, 887
BtsIMutI CAGTG 2 cut(s) 436, 687
Cac8I GCNNGC 2 cut(s) 159, 309
CfoI GCGC 1 cut(s) 285
Cfr13I GGNCC 8 cut(s) 44, 123, 124, 213, 289, 523, 988, 1184
Csp6I GTAC 2 cut(s) 85, 1327
CviAII CATG 4 cut(s) 644, 1025, 1046, 1440
CviQI GTAC 2 cut(s) 85, 1327
DdeI CTNAG 7 cut(s) 138, 761, 920, 1053, 1385, 1515, 1563
DpnI GATC 6 cut(s) 144, 149, 220, 807, 1023, 1401
DpnII GATC 6 cut(s) 142, 147, 218, 805, 1021, 1399
DriI GACNNNNNGTC 1 cut(s) 986
Eam1105I GACNNNNNGTC 1 cut(s) 986
EciI GGCGGA 1 cut(s) 211
Ecl136II GAGCTC 1 cut(s) 1089
Eco130I CCWWGG 2 cut(s) 93, 905
Eco24I GRGCYC 2 cut(s) 127, 1091
Eco31I GGTCTC 1 cut(s) 68
Eco47I GGWCC 4 cut(s) 44, 213, 289, 988
Eco53kI GAGCTC 1 cut(s) 1089
Eco81I CCTNAGG 1 cut(s) 1385
EcoICRI GAGCTC 1 cut(s) 1089
EcoRI GAATTC 1 cut(s) 1226
EcoRII CCWGG 2 cut(s) 235, 285
EcoT14I CCWWGG 2 cut(s) 93, 905
EcoT22I ATGCAT 2 cut(s) 394, 1445
EcoT38I GRGCYC 2 cut(s) 127, 1091
ErhI CCWWGG 2 cut(s) 93, 905
FaeI CATG 4 cut(s) 647, 1028, 1049, 1443
FalI AAGNNNNNCTT 4 cut(s) 645, 677, 1294, 1326
FaqI GGGAC 2 cut(s) 993, 1525
FatI CATG 4 cut(s) 643, 1024, 1045, 1439
FauI CCCGC 4 cut(s) 178, 316, 369, 540
FbaI TGATCA 2 cut(s) 147, 1399
Fnu4HI GCNGC 1 cut(s) 1050
FokI GGATG 6 cut(s) 169, 239, 379, 389, 758, 894
FriOI GRGCYC 2 cut(s) 127, 1091
Fsp4HI GCNGC 1 cut(s) 1050
FspBI CTAG 4 cut(s) 365, 672, 1220, 1452
GlaI GCGC 1 cut(s) 284
GluI GCNGC 1 cut(s) 1050
GsaI CCCAGC 2 cut(s) 529, 841
GsuI CTGGAG 1 cut(s) 909
HaeII RGCGCY 1 cut(s) 286
HaeIII GGCC 5 cut(s) 125, 524, 952, 1058, 1185
HapII CCGG 5 cut(s) 216, 264, 275, 374, 584
HhaI GCGC 1 cut(s) 285
Hin1II CATG 4 cut(s) 647, 1028, 1049, 1443
Hin6I GCGC 1 cut(s) 283
HinP1I GCGC 1 cut(s) 283
HincII GTYRAC 1 cut(s) 1477
HindII GTYRAC 1 cut(s) 1477
HinfI GANTC 4 cut(s) 848, 922, 1000, 1534
HpaII CCGG 5 cut(s) 216, 264, 275, 374, 584
Hpy166II GTNNAC 3 cut(s) 1459, 1477, 1548
Hpy188I TCNGA 6 cut(s) 147, 322, 853, 1093, 1294, 1369
Hpy188III TCNNGA 8 cut(s) 216, 374, 728, 926, 991, 1084, 1387, 1538
Hpy8I GTNNAC 3 cut(s) 1459, 1477, 1548
HpyAV CCTTC 2 cut(s) 239, 589
HpyCH4III ACNGT 2 cut(s) 691, 913
HpyCH4V TGCA 6 cut(s) 380, 392, 812, 1298, 1315, 1443
HpyF10VI GCNNNNNNNGC 3 cut(s) 35, 308, 1055
HpyF3I CTNAG 7 cut(s) 138, 761, 920, 1053, 1385, 1515, 1563
Hsp92II CATG 4 cut(s) 647, 1028, 1049, 1443
HspAI GCGC 1 cut(s) 283
Kpn2I TCCGGA 2 cut(s) 215, 373
Ksp22I TGATCA 2 cut(s) 147, 1399
Kzo9I GATC 6 cut(s) 142, 147, 218, 805, 1021, 1399
LmnI GCTCC 5 cut(s) 26, 98, 426, 495, 1564
Lsp1109I GCAGC 1 cut(s) 1036
LweI GCATC 6 cut(s) 367, 401, 1123, 1188, 1285, 1531
MaeI CTAG 4 cut(s) 365, 672, 1220, 1452
MaeIII GTNAC 3 cut(s) 404, 942, 1522
MalI GATC 6 cut(s) 144, 149, 220, 807, 1023, 1401
MboI GATC 6 cut(s) 142, 147, 218, 805, 1021, 1399
MboII GAAGA 5 cut(s) 454, 834, 971, 1009, 1231
MfeI CAATTG 3 cut(s) 39, 151, 938
MflI RGATCY 2 cut(s) 142, 218
MhlI GDGCHC 5 cut(s) 127, 309, 438, 1091, 1292
MluCI AATT 9 cut(s) 39, 151, 737, 825, 938, 962, 1068, 1167, 1226
MlyI GAGTC 3 cut(s) 857, 931, 1543
MmeI TCCRAC 3 cut(s) 345, 591, 673
MnlI CCTC 9 cut(s) 28, 266, 467, 1166, 1216, 1318, 1394, 1424, 1510
Mph1103I ATGCAT 2 cut(s) 394, 1445
MroI TCCGGA 2 cut(s) 215, 373
MseI TTAA 3 cut(s) 345, 974, 1035
MslI CAYNNNNRTG 1 cut(s) 1494
MspI CCGG 5 cut(s) 216, 264, 275, 374, 584
MspR9I CCNGG 4 cut(s) 237, 275, 287, 584
MunI CAATTG 3 cut(s) 39, 151, 938
Mva1269I GAATGC 3 cut(s) 394, 572, 1561
MvaI CCWGG 2 cut(s) 237, 287
MwoI GCNNNNNNNGC 3 cut(s) 35, 308, 1055
NciI CCSGG 2 cut(s) 275, 584
NdeII GATC 6 cut(s) 142, 147, 218, 805, 1021, 1399
NlaIII CATG 4 cut(s) 647, 1028, 1049, 1443
NlaIV GGNNCC 4 cut(s) 28, 125, 220, 372
NmuCI GTSAC 2 cut(s) 404, 1522
NsiI ATGCAT 2 cut(s) 394, 1445
NspI RCATGY 3 cut(s) 647, 1049, 1443
PcsI WCGNNNNNNNCGW 1 cut(s) 27
PctI GAATGC 3 cut(s) 394, 572, 1561
PfeI GAWTC 1 cut(s) 1000
PflMI CCANNNNNTGG 1 cut(s) 1343
PkrI GCNGC 1 cut(s) 1051
PleI GAGTC 3 cut(s) 856, 930, 1542
PpsI GAGTC 3 cut(s) 856, 930, 1542
Psp124BI GAGCTC 1 cut(s) 1091
Psp6I CCWGG 2 cut(s) 235, 285
PspFI CCCAGC 2 cut(s) 525, 837
PspGI CCWGG 2 cut(s) 235, 285
PspN4I GGNNCC 4 cut(s) 28, 125, 220, 372
PspOMI GGGCCC 1 cut(s) 123
PspPI GGNCC 8 cut(s) 44, 123, 124, 213, 289, 523, 988, 1184
PsuI RGATCY 2 cut(s) 142, 218
RsaI GTAC 2 cut(s) 86, 1328
RsaNI GTAC 2 cut(s) 85, 1327
RseI CAYNNNNRTG 1 cut(s) 1494
SacI GAGCTC 1 cut(s) 1091
SaqAI TTAA 3 cut(s) 345, 974, 1035
SatI GCNGC 1 cut(s) 1050
Sau3AI GATC 6 cut(s) 142, 147, 218, 805, 1021, 1399
Sau96I GGNCC 8 cut(s) 44, 123, 124, 213, 289, 523, 988, 1184
SchI GAGTC 3 cut(s) 857, 931, 1543
ScrFI CCNGG 4 cut(s) 237, 275, 287, 584
SduI GDGCHC 5 cut(s) 127, 309, 438, 1091, 1292
SfaNI GCATC 6 cut(s) 367, 401, 1123, 1188, 1285, 1531
SinI GGWCC 4 cut(s) 44, 213, 289, 988
SmiMI CAYNNNNRTG 1 cut(s) 1494
SmlI CTYRAG 1 cut(s) 1260
SmoI CTYRAG 1 cut(s) 1260
Sse9I AATT 9 cut(s) 39, 151, 737, 825, 938, 962, 1068, 1167, 1226
SsiI CCGC 6 cut(s) 171, 222, 309, 362, 417, 533
SspMI CTAG 4 cut(s) 365, 672, 1220, 1452
SstI GAGCTC 1 cut(s) 1091
StyD4I CCNGG 4 cut(s) 235, 273, 285, 582
StyI CCWWGG 2 cut(s) 93, 905
TaaI ACNGT 2 cut(s) 691, 913
TaqI TCGA 1 cut(s) 1539
TasI AATT 9 cut(s) 39, 151, 737, 825, 938, 962, 1068, 1167, 1226
TatI WGTACW 2 cut(s) 84, 1326
TfiI GAWTC 1 cut(s) 1000
Tru1I TTAA 3 cut(s) 345, 974, 1035
Tru9I TTAA 3 cut(s) 345, 974, 1035
TscAI CASTG 2 cut(s) 443, 694
TseFI GTSAC 2 cut(s) 404, 1522
TseI GCWGC 1 cut(s) 1049
Tsp45I GTSAC 2 cut(s) 404, 1522
TspDTI ATGAA 5 cut(s) 17, 401, 579, 1010, 1568
TspGWI ACGGA 1 cut(s) 392
TspRI CASTG 2 cut(s) 443, 694
Van91I CCANNNNNTGG 1 cut(s) 1343
VpaK11BI GGWCC 4 cut(s) 44, 213, 289, 988
XapI RAATTY 2 cut(s) 825, 1226
XceI RCATGY 3 cut(s) 647, 1049, 1443
XcmI CCANNNNNNNNNTGG 2 cut(s) 912, 1145
XspI CTAG 4 cut(s) 365, 672, 1220, 1452
Zsp2I ATGCAT 2 cut(s) 394, 1445
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.