Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0002984

Physical Location & Seq

Genomic Coordinates Forward (+)

18862421 .. 18866040

Gene Structure 3620 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G017430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1731 bp

ATGGATACCACTAAATGGTTCCTTCTACTCGCTTGTTGCTGTGTTTTTGTGATACATAACATCAATGGAGTCGAAGCTTCACACAAGGTATACCCAGAGTTTCAGTCTCTTCGTGCTGTGAAGATTAAGCAAGTCCACAGAACTGGTTTTCACTTTCAACCTCCCAGCCACTGGATTAATGACCCAAATGGTGAGACCTTGTATTTTGGGGGTCTCTACCACTTTTTCTATCAGTACAATCCCAAGGGAGCTGTTTGGGGAAACATTGTATGGGCCCATTCAGTCTCTAAGGATCTGATCAATTGGCAAGCCCTTGAACCCGCCATATACCCATCCAAGGCCTTTGACATAAACGGGTGCTGGTCCGGATCCGCCACCCTTCTCCCTGGCAACAAGCCCATCATCCTCTACACCGGACTTGACCCTGAAAAGCGCCAGGTCCAAAACTACGCCGTGCCGGCAAATGTATCCGACCCATATCTACGCAAATGGGTTAAGCCCGACAACAACCCGCTAGTGGTTCCGGATGCAAGTATGAATGCATCCCAGTTCCGTGACCCGACAACCGCTTGGTGGAGCAATGGGCACTGGAAGATGTTGGTGGGTGGCAAGAGAAAGCATAGAGGAATGGCTCATTTGTATAGGAGCAAGGATTTTGTTTATTGGGTCAAGGCCCAGCACCCGCTTCACTCTGCCCCGAAAACGGGTATGTGGGAATGCCCGGATTTTTACCCGGTTTCATTGAAGGGCAAGGTAGGGTTGGACACATCAAAAGATGGTGGGAATGTGAAGCATGTTTTGAAAGTGAGCCTTGATGAGACTAGGTATGACTACTACACTGTTGGAAAATACTTTCCTAAACAAGATAGGTATGTTCCTGATAAGGAATTGGTGGATGGTTGGGCTGGATTGAGATATGATTATGGGAACTTCTATGCTTCCAAAACGTTCTTTGATCCTGCAAAGAATAGAAGAATTTTGTGGGGCTGGGCTAATGAGTCTGATACTCCTAACAATGATGTTGAAAAGGGATGGGCTGGGGTTCAGGCAATCCCAAGGACTGTGTGGCTGAGTCCTGATGGGAAACAATTGTTACAATGGCCTGTTGAAGAATTGGAAACTTTAAGGGGACAAAAGGTCCAGATGAAGAATCAAAATCTCAAAGTGGGAGATCATGTTGAAGTTAAAGGAATACATGCTGCTCAGGCCGATGTTGAAATTATATTCTCGTTCAAGAGCTCGGACAAAGCAGAGAAGTTTGACCCTAAATGGTCAAACCTTGATGCCCAAGCAATATGTGGGCTAACGGGTTCAAAAATTGGAGGTGGCATTGGCCCATTTGGGCTATTGACTTTAGCTTCACAAAACCTAGAGGAATTCACTCCTGTCTTCTTTAGGGTGTTCAAAACTCAAGGCAATAAGTATAAGGTTCTCCTGTGCTCTGATGCAATAAGTTCCTCTTTGCAGGATAATCTGTACAAACCATCATTTGCTGGTTTTGTAGATGTAGATTTATCTGATAAGAAACTCTCCCTCAGGAGTTTGATTGATCATTCTGTTGTTGAGAGTTTTGGAGATGGAGGAAAAACATGCATAACTTCTAGGGTTTACCCCACTCTGGCTGTTGACAATAAAGCTCACTTGTATGTGTTCAACAATGGGACTGAGGCTGTCACTATTGAGAGTCTCGATGCGTGGACTATGAATGCTCCTAAGTTGATGAACCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005623 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0030312 GO:0033036 GO:0042742 GO:0043207 GO:0044464 GO:0050832 GO:0050896 GO:0051179 GO:0051704 GO:0051707 GO:0052575 GO:0052576 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

ko00052 ko00500 ko01100 map00052 map00500 map01100

Pfam Domains

Protein Families

Glyco_hydro_32C Glyco_hydro_32N

Protein Analysis

576

Amino Acids

65.02

Weight (kDa)

8.7

Isoelectric Point (pI)

29.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_32N	PF00251	51 - 368	7.3e-102	Glycosyl hydrolases family 32 N-terminal domain
Glyco_hydro_32C	PF08244	371 - 566	1.1e-23	Glycosyl hydrolases family 32 C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002984)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36190 AT3G52600 AT3G52600 AT3G52600
fragaria_vesca	FvH4_6g19270 FvH4_6g19270 FvH4_6g19271
malus_domestica	MD12G1028200.v1.1 MD14G1028500.v1.1
prunus_persica	Prupe.7G103100_v2.0.a1 Prupe.7G103200_v2.0.a1 Prupe.7G103300_v2.0.a1 Prupe.7G103400_v2.0.a1 Prupe.7G103400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0474371 RchiOBHm_Chr3g0474381
rosa_laevigata	RLG00000023930
rosa_multiflora	Rmu_co8392863.1_g000001 Rmu_co8415991.1_g000001 Rmu_co8444851.1_g000001 Rmu_sc0004507.1_g000003 Rmu_sc0004507.1_g000004
rosa_roxburghii	Rroxscaffold_6G00407310 Rroxscaffold_6G00407320
rosa_rugosa	Rorug03G0140200 Rorug03G0140300 Rorug03G0140400 Rorug03G0140500
rosa_samantha	Rh3AG191100 Rh3AG191200 Rh3BG220300 Rh3BG220400 Rh3CG215600 Rh3CG215700 Rh3DG216000 Rh3DG216100
rosa_wichuraiana	Rw3G017430 Rw3G017440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	15, 171
AccI	GTMKAC	1 cut(s)	90
AccIII	TCCGGA	2 cut(s)	365, 523
AciI	CCGC	5 cut(s)	321, 372, 512, 567, 683
AclI	AACGTT	1 cut(s)	947
AclWI	GGATC	4 cut(s)	300, 363, 376, 950
AcsI	RAATTY	2 cut(s)	975, 1376
AfaI	GTAC	2 cut(s)	236, 1478
AfiI	CCNNNNNNNGG	8 cut(s)	15, 171, 337, 517, 573, 703, 704, 1618
AhdI	GACNNNNNGTC	1 cut(s)	1136
AjnI	CCWGG	2 cut(s)	385, 435
AluBI	AGCT	5 cut(s)	77, 251, 1239, 1358, 1637
AluI	AGCT	5 cut(s)	77, 251, 1239, 1358, 1637
Alw21I	GWGCWC	2 cut(s)	1241, 1442
Alw26I	GTCTC	6 cut(s)	111, 188, 218, 289, 812, 1691
AlwI	GGATC	4 cut(s)	300, 363, 376, 950
AlwNI	CAGNNNCTG	1 cut(s)	171
Aor13HI	TCCGGA	2 cut(s)	365, 523
AoxI	GGCC	6 cut(s)	273, 339, 672, 1100, 1206, 1333
ApaI	GGGCCC	1 cut(s)	277
ApeKI	GCWGC	1 cut(s)	1199
ApoI	RAATTY	2 cut(s)	975, 1376
AseI	ATTAAT	1 cut(s)	177
AspLEI	GCGC	1 cut(s)	435
AspS9I	GGNCC	7 cut(s)	273, 274, 363, 439, 673, 1138, 1334
AsuC2I	CCSGG	2 cut(s)	722, 734
AsuHPI	GGTGA	1 cut(s)	203
AvaII	GGWCC	3 cut(s)	363, 439, 1138
AxyI	CCTNAGG	1 cut(s)	1535
BaeGI	GKGCMC	2 cut(s)	277, 588
BamHI	GGATCC	1 cut(s)	368
BanII	GRGCYC	2 cut(s)	277, 1241
BbsI	GAAGAC	1 cut(s)	1381
Bbv12I	GWGCWC	2 cut(s)	1241, 1442
BbvI	GCAGC	1 cut(s)	1186
BccI	CCATC	8 cut(s)	340, 407, 770, 890, 1026, 1073, 1492, 1571
BceAI	ACGGC	1 cut(s)	437
BciT130I	CCWGG	2 cut(s)	387, 437
BciVI	GTATCC	1 cut(s)	478
BclI	TGATCA	2 cut(s)	297, 1549
BcnI	CCSGG	2 cut(s)	722, 734
BcoDI	GTCTC	6 cut(s)	111, 188, 218, 289, 812, 1691
BfaI	CTAG	4 cut(s)	515, 822, 1370, 1602
BfoI	RGCGCY	1 cut(s)	436
BfuI	GTATCC	1 cut(s)	478
BglI	GCCNNNNNGGC	1 cut(s)	458
BisI	GCNGC	1 cut(s)	1200
BlsI	GCNGC	1 cut(s)	1201
Bme1390I	CCNGG	4 cut(s)	387, 437, 722, 734
Bme18I	GGWCC	3 cut(s)	363, 439, 1138
BmeRI	GACNNNNNGTC	1 cut(s)	1136
BmgT120I	GGNCC	7 cut(s)	273, 274, 363, 439, 673, 1138, 1334
BmiI	GGNNCC	4 cut(s)	20, 275, 370, 522
BmrFI	CCNGG	4 cut(s)	387, 437, 722, 734
BmrI	ACTGGG	1 cut(s)	541
BmsI	GCATC	5 cut(s)	517, 551, 1273, 1435, 1681
BmuI	ACTGGG	1 cut(s)	541
BpiI	GAAGAC	1 cut(s)	1381
Bpu10I	CCTNAGC	1 cut(s)	1203
BpuEI	CTTGAG	1 cut(s)	1395
BpuMI	CCSGG	2 cut(s)	722, 734
BsaI	GGTCTC	2 cut(s)	188, 218
BsaJI	CCNNGG	4 cut(s)	243, 336, 385, 1055
BsaWI	WCCGGW	3 cut(s)	365, 413, 523
BsaXI	ACNNNNNCTCC	2 cut(s)	1161, 1191
Bsc4I	CCNNNNNNNGG	8 cut(s)	15, 171, 337, 517, 573, 703, 704, 1618
Bse118I	RCCGGY	1 cut(s)	457
Bse1I	ACTGG	4 cut(s)	148, 176, 547, 593
Bse21I	CCTNAGG	1 cut(s)	1535
Bse3DI	GCAATG	1 cut(s)	586
BseAI	TCCGGA	2 cut(s)	365, 523
BseBI	CCWGG	2 cut(s)	387, 437
BseDI	CCNNGG	4 cut(s)	243, 336, 385, 1055
BseGI	GGATG	6 cut(s)	332, 402, 532, 542, 901, 1037
BseLI	CCNNNNNNNGG	8 cut(s)	15, 171, 337, 517, 573, 703, 704, 1618
BseMI	GCAATG	1 cut(s)	586
BseMII	CTCAG	4 cut(s)	1061, 1217, 1549, 1656
BseNI	ACTGG	4 cut(s)	148, 176, 547, 593
BseSI	GKGCMC	2 cut(s)	277, 588
BseXI	GCAGC	1 cut(s)	1186
BseYI	CCCAGC	4 cut(s)	164, 675, 987, 1037
BshFI	GGCC	6 cut(s)	275, 341, 674, 1102, 1208, 1335
BsiHKAI	GWGCWC	2 cut(s)	1241, 1442
BsiSI	CCGG	6 cut(s)	366, 414, 458, 524, 722, 734
BslFI	GGGAC	2 cut(s)	1143, 1675
BslI	CCNNNNNNNGG	8 cut(s)	15, 171, 337, 517, 573, 703, 704, 1618
BsmAI	GTCTC	6 cut(s)	111, 188, 218, 289, 812, 1691
BsmFI	GGGAC	2 cut(s)	1143, 1675
BsmI	GAATGC	3 cut(s)	544, 722, 1711
BsnI	GGCC	6 cut(s)	275, 341, 674, 1102, 1208, 1335
Bso31I	GGTCTC	2 cut(s)	188, 218
Bsp120I	GGGCCC	1 cut(s)	273
Bsp1286I	GDGCHC	4 cut(s)	277, 588, 1241, 1442
Bsp13I	TCCGGA	2 cut(s)	365, 523
Bsp1407I	TGTACA	1 cut(s)	1476
Bsp143I	GATC	6 cut(s)	292, 297, 368, 955, 1171, 1549
BspACI	CCGC	5 cut(s)	321, 372, 512, 567, 683
BspANI	GGCC	6 cut(s)	275, 341, 674, 1102, 1208, 1335
BspCNI	CTCAG	4 cut(s)	1062, 1216, 1548, 1657
BspEI	TCCGGA	2 cut(s)	365, 523
BspLI	GGNNCC	4 cut(s)	20, 275, 370, 522
BspPI	GGATC	4 cut(s)	300, 363, 376, 950
BspTNI	GGTCTC	2 cut(s)	188, 218
BsrDI	GCAATG	1 cut(s)	586
BsrFI	RCCGGY	1 cut(s)	457
BsrGI	TGTACA	1 cut(s)	1476
BsrI	ACTGG	4 cut(s)	148, 176, 547, 593
BssAI	RCCGGY	1 cut(s)	457
BssECI	CCNNGG	4 cut(s)	243, 336, 385, 1055
BssMI	GATC	6 cut(s)	292, 297, 368, 955, 1171, 1549
BssNAI	GTATAC	1 cut(s)	91
BssT1I	CCWWGG	3 cut(s)	243, 336, 1055
Bst1107I	GTATAC	1 cut(s)	91
Bst2UI	CCWGG	2 cut(s)	387, 437
Bst4CI	ACNGT	2 cut(s)	841, 1063
Bst6I	CTCTTC	1 cut(s)	114
BstAUI	TGTACA	1 cut(s)	1476
BstC8I	GCNNGC	2 cut(s)	309, 459
BstDEI	CTNAG	6 cut(s)	288, 1070, 1203, 1535, 1665, 1713
BstF5I	GGATG	6 cut(s)	332, 402, 532, 542, 901, 1037
BstH2I	RGCGCY	1 cut(s)	436
BstHHI	GCGC	1 cut(s)	435
BstKTI	GATC	6 cut(s)	295, 300, 371, 958, 1174, 1552
BstMAI	GTCTC	6 cut(s)	111, 188, 218, 289, 812, 1691
BstMBI	GATC	6 cut(s)	292, 297, 368, 955, 1171, 1549
BstMWI	GCNNNNNNNGC	2 cut(s)	458, 1205
BstNI	CCWGG	2 cut(s)	387, 437
BstNSI	RCATGY	3 cut(s)	797, 1199, 1593
BstSCI	CCNGG	4 cut(s)	385, 435, 720, 732
BstSLI	GKGCMC	2 cut(s)	277, 588
BstV1I	GCAGC	1 cut(s)	1186
BstV2I	GAAGAC	1 cut(s)	1381
BstX2I	RGATCY	2 cut(s)	292, 368
BstXI	CCANNNNNNTGG	1 cut(s)	143
BstYI	RGATCY	2 cut(s)	292, 368
BstZ17I	GTATAC	1 cut(s)	91
Bsu36I	CCTNAGG	1 cut(s)	1535
BsuI	GTATCC	1 cut(s)	478
BsuRI	GGCC	6 cut(s)	275, 341, 674, 1102, 1208, 1335
BtsCI	GGATG	6 cut(s)	332, 402, 532, 542, 901, 1037
BtsIMutI	CAGTG	3 cut(s)	169, 586, 837
Cac8I	GCNNGC	2 cut(s)	309, 459
CaiI	CAGNNNCTG	1 cut(s)	171
CfoI	GCGC	1 cut(s)	435
Cfr10I	RCCGGY	1 cut(s)	457
Cfr13I	GGNCC	7 cut(s)	273, 274, 363, 439, 673, 1138, 1334
Csp6I	GTAC	2 cut(s)	235, 1477
CviAII	CATG	4 cut(s)	794, 1175, 1196, 1590
CviQI	GTAC	2 cut(s)	235, 1477
DdeI	CTNAG	6 cut(s)	288, 1070, 1203, 1535, 1665, 1713
DpnI	GATC	6 cut(s)	294, 299, 370, 957, 1173, 1551
DpnII	GATC	6 cut(s)	292, 297, 368, 955, 1171, 1549
DriI	GACNNNNNGTC	1 cut(s)	1136
Eam1104I	CTCTTC	1 cut(s)	114
Eam1105I	GACNNNNNGTC	1 cut(s)	1136
EarI	CTCTTC	1 cut(s)	114
EciI	GGCGGA	1 cut(s)	361
Ecl136II	GAGCTC	1 cut(s)	1239
Eco130I	CCWWGG	3 cut(s)	243, 336, 1055
Eco147I	AGGCCT	1 cut(s)	341
Eco24I	GRGCYC	2 cut(s)	277, 1241
Eco31I	GGTCTC	2 cut(s)	188, 218
Eco47I	GGWCC	3 cut(s)	363, 439, 1138
Eco53kI	GAGCTC	1 cut(s)	1239
Eco81I	CCTNAGG	1 cut(s)	1535
EcoICRI	GAGCTC	1 cut(s)	1239
EcoRI	GAATTC	1 cut(s)	1376
EcoRII	CCWGG	2 cut(s)	385, 435
EcoT14I	CCWWGG	3 cut(s)	243, 336, 1055
EcoT22I	ATGCAT	2 cut(s)	544, 1595
EcoT38I	GRGCYC	2 cut(s)	277, 1241
ErhI	CCWWGG	3 cut(s)	243, 336, 1055
FaeI	CATG	4 cut(s)	797, 1178, 1199, 1593
FalI	AAGNNNNNCTT	4 cut(s)	795, 827, 1444, 1476
FaqI	GGGAC	2 cut(s)	1143, 1675
FatI	CATG	4 cut(s)	793, 1174, 1195, 1589
FauI	CCCGC	3 cut(s)	328, 519, 690
FbaI	TGATCA	2 cut(s)	297, 1549
FblI	GTMKAC	1 cut(s)	90
Fnu4HI	GCNGC	1 cut(s)	1200
FokI	GGATG	6 cut(s)	319, 389, 529, 539, 908, 1044
FriOI	GRGCYC	2 cut(s)	277, 1241
Fsp4HI	GCNGC	1 cut(s)	1200
FspBI	CTAG	4 cut(s)	515, 822, 1370, 1602
GlaI	GCGC	1 cut(s)	434
GluI	GCNGC	1 cut(s)	1200
GsaI	CCCAGC	4 cut(s)	168, 679, 991, 1041
HaeII	RGCGCY	1 cut(s)	436
HaeIII	GGCC	6 cut(s)	275, 341, 674, 1102, 1208, 1335
HapII	CCGG	6 cut(s)	366, 414, 458, 524, 722, 734
HhaI	GCGC	1 cut(s)	435
Hin1II	CATG	4 cut(s)	797, 1178, 1199, 1593
Hin6I	GCGC	1 cut(s)	433
HinP1I	GCGC	1 cut(s)	433
HincII	GTYRAC	1 cut(s)	1627
HindII	GTYRAC	1 cut(s)	1627
HindIII	AAGCTT	1 cut(s)	75
HinfI	GANTC	5 cut(s)	69, 998, 1072, 1150, 1684
HpaII	CCGG	6 cut(s)	366, 414, 458, 524, 722, 734
HphI	GGTGA	1 cut(s)	203
Hpy166II	GTNNAC	5 cut(s)	91, 136, 1609, 1627, 1698
Hpy188I	TCNGA	6 cut(s)	297, 472, 1003, 1243, 1444, 1519
Hpy188III	TCNNGA	8 cut(s)	366, 524, 878, 1076, 1141, 1234, 1537, 1688
Hpy8I	GTNNAC	5 cut(s)	91, 136, 1609, 1627, 1698
HpyAV	CCTTC	3 cut(s)	32, 389, 739
HpyCH4III	ACNGT	2 cut(s)	841, 1063
HpyCH4IV	ACGT	1 cut(s)	947
HpyCH4V	TGCA	6 cut(s)	530, 542, 962, 1448, 1465, 1593
HpyF10VI	GCNNNNNNNGC	2 cut(s)	458, 1205
HpyF3I	CTNAG	6 cut(s)	288, 1070, 1203, 1535, 1665, 1713
HpySE526I	ACGT	1 cut(s)	947
Hsp92II	CATG	4 cut(s)	797, 1178, 1199, 1593
HspAI	GCGC	1 cut(s)	433
Kpn2I	TCCGGA	2 cut(s)	365, 523
KroI	GCCGGC	1 cut(s)	457
KroNI	GCCGGC	1 cut(s)	459
Ksp22I	TGATCA	2 cut(s)	297, 1549
Kzo9I	GATC	6 cut(s)	292, 297, 368, 955, 1171, 1549
LmnI	GCTCC	4 cut(s)	248, 576, 645, 1714
Lsp1109I	GCAGC	1 cut(s)	1186
LweI	GCATC	5 cut(s)	517, 551, 1273, 1435, 1681
MaeI	CTAG	4 cut(s)	515, 822, 1370, 1602
MaeII	ACGT	1 cut(s)	947
MaeIII	GTNAC	3 cut(s)	554, 1092, 1672
MalI	GATC	6 cut(s)	294, 299, 370, 957, 1173, 1551
MboI	GATC	6 cut(s)	292, 297, 368, 955, 1171, 1549
MboII	GAAGA	7 cut(s)	101, 133, 604, 984, 1121, 1159, 1381
MfeI	CAATTG	2 cut(s)	301, 1088
MflI	RGATCY	2 cut(s)	292, 368
MhlI	GDGCHC	4 cut(s)	277, 588, 1241, 1442
MluCI	AATT	8 cut(s)	301, 887, 975, 1088, 1112, 1218, 1317, 1376
MlyI	GAGTC	4 cut(s)	78, 1007, 1081, 1693
MmeI	TCCRAC	3 cut(s)	495, 741, 823
MnlI	CCTC	9 cut(s)	171, 416, 617, 1316, 1366, 1468, 1544, 1574, 1660
Mph1103I	ATGCAT	2 cut(s)	544, 1595
MroI	TCCGGA	2 cut(s)	365, 523
MroNI	GCCGGC	1 cut(s)	457
MseI	TTAA	5 cut(s)	126, 177, 495, 1124, 1185
MslI	CAYNNNNRTG	1 cut(s)	1644
MspI	CCGG	6 cut(s)	366, 414, 458, 524, 722, 734
MspR9I	CCNGG	4 cut(s)	387, 437, 722, 734
MunI	CAATTG	2 cut(s)	301, 1088
Mva1269I	GAATGC	3 cut(s)	544, 722, 1711
MvaI	CCWGG	2 cut(s)	387, 437
MwoI	GCNNNNNNNGC	2 cut(s)	458, 1205
NaeI	GCCGGC	1 cut(s)	459
NciI	CCSGG	2 cut(s)	722, 734
NdeII	GATC	6 cut(s)	292, 297, 368, 955, 1171, 1549
NgoMIV	GCCGGC	1 cut(s)	457
NlaIII	CATG	4 cut(s)	797, 1178, 1199, 1593
NlaIV	GGNNCC	4 cut(s)	20, 275, 370, 522
NmuCI	GTSAC	2 cut(s)	554, 1672
NsiI	ATGCAT	2 cut(s)	544, 1595
NspI	RCATGY	3 cut(s)	797, 1199, 1593
PceI	AGGCCT	1 cut(s)	341
PctI	GAATGC	3 cut(s)	544, 722, 1711
PdiI	GCCGGC	1 cut(s)	459
PfeI	GAWTC	1 cut(s)	1150
PflMI	CCANNNNNTGG	2 cut(s)	15, 171
PkrI	GCNGC	1 cut(s)	1201
PleI	GAGTC	4 cut(s)	77, 1006, 1080, 1692
PpsI	GAGTC	4 cut(s)	77, 1006, 1080, 1692
PshBI	ATTAAT	1 cut(s)	177
Psp124BI	GAGCTC	1 cut(s)	1241
Psp1406I	AACGTT	1 cut(s)	947
Psp6I	CCWGG	2 cut(s)	385, 435
PspFI	CCCAGC	4 cut(s)	164, 675, 987, 1037
PspGI	CCWGG	2 cut(s)	385, 435
PspN4I	GGNNCC	4 cut(s)	20, 275, 370, 522
PspOMI	GGGCCC	1 cut(s)	273
PspPI	GGNCC	7 cut(s)	273, 274, 363, 439, 673, 1138, 1334
PstNI	CAGNNNCTG	1 cut(s)	171
PsuI	RGATCY	2 cut(s)	292, 368
RsaI	GTAC	2 cut(s)	236, 1478
RsaNI	GTAC	2 cut(s)	235, 1477
RseI	CAYNNNNRTG	1 cut(s)	1644
SacI	GAGCTC	1 cut(s)	1241
SaqAI	TTAA	5 cut(s)	126, 177, 495, 1124, 1185
SatI	GCNGC	1 cut(s)	1200
Sau3AI	GATC	6 cut(s)	292, 297, 368, 955, 1171, 1549
Sau96I	GGNCC	7 cut(s)	273, 274, 363, 439, 673, 1138, 1334
SchI	GAGTC	4 cut(s)	78, 1007, 1081, 1693
ScrFI	CCNGG	4 cut(s)	387, 437, 722, 734
SduI	GDGCHC	4 cut(s)	277, 588, 1241, 1442
SfaNI	GCATC	5 cut(s)	517, 551, 1273, 1435, 1681
SinI	GGWCC	3 cut(s)	363, 439, 1138
SmiMI	CAYNNNNRTG	1 cut(s)	1644
SmlI	CTYRAG	1 cut(s)	1410
SmoI	CTYRAG	1 cut(s)	1410
Sse9I	AATT	8 cut(s)	301, 887, 975, 1088, 1112, 1218, 1317, 1376
SseBI	AGGCCT	1 cut(s)	341
SsiI	CCGC	5 cut(s)	321, 372, 512, 567, 683
SspMI	CTAG	4 cut(s)	515, 822, 1370, 1602
SstI	GAGCTC	1 cut(s)	1241
StuI	AGGCCT	1 cut(s)	341
StyD4I	CCNGG	4 cut(s)	385, 435, 720, 732
StyI	CCWWGG	3 cut(s)	243, 336, 1055
TaaI	ACNGT	2 cut(s)	841, 1063
TaiI	ACGT	1 cut(s)	950
TaqI	TCGA	2 cut(s)	72, 1689
TasI	AATT	8 cut(s)	301, 887, 975, 1088, 1112, 1218, 1317, 1376
TatI	WGTACW	2 cut(s)	234, 1476
TfiI	GAWTC	1 cut(s)	1150
Tru1I	TTAA	5 cut(s)	126, 177, 495, 1124, 1185
Tru9I	TTAA	5 cut(s)	126, 177, 495, 1124, 1185
TscAI	CASTG	3 cut(s)	176, 593, 844
TseFI	GTSAC	2 cut(s)	554, 1672
TseI	GCWGC	1 cut(s)	1199
Tsp45I	GTSAC	2 cut(s)	554, 1672
TspDTI	ATGAA	4 cut(s)	551, 729, 1160, 1718
TspGWI	ACGGA	1 cut(s)	542
TspRI	CASTG	3 cut(s)	176, 593, 844
Van91I	CCANNNNNTGG	2 cut(s)	15, 171
VpaK11BI	GGWCC	3 cut(s)	363, 439, 1138
VspI	ATTAAT	1 cut(s)	177
XapI	RAATTY	2 cut(s)	975, 1376
XceI	RCATGY	3 cut(s)	797, 1199, 1593
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1062, 1295
XmiI	GTMKAC	1 cut(s)	90
XspI	CTAG	4 cut(s)	515, 822, 1370, 1602
Zsp2I	ATGCAT	2 cut(s)	544, 1595

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.