Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0002984

Physical Location & Seq

Genomic Coordinates Forward (+)

19888407 .. 19892052

Gene Structure 3646 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG216000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1731 bp

ATGGATACCACTAAATGGTTCCTTCTACTCGCTTGTTGCTGTGTTTTTGTGATACATAACATCAATGGAGTCGAAGCTTCACACAAGGTATACCCAGAGTTTCAGTCTCTTCGTGCTGTGAAGATCAAGCAAGTCCACAGAACTGGTTTTCACTTTCAACCTCCCAGCCACTGGATTAATGGACCTATGTATTTTGGGGGTCTCTACCACTTTTTCTATCAGTACAATCCCAAAGGAGCTGTTTGGGGAAACATTGTATGGGCCCATTCAGTCTCTAAGGATCTGATCAATTGGCAAGCCCTTGAACCCGCCATATACCCATCCAAGCCCTTTGACATAAACGGGTGCTGGTCCGGATCCGCCACCCTTCTCCCGGGCAACAAGCCCATCATCCTCTACACCGGACTTGACCCGGAAAAGCGCCAGGTCCAAAACTACGCCTTGCCCGCAAATGTTTCCGACCCATATCTACGCAAATGGGTTAAGCCCGACAACAACCCGCTAGTGGTTCCGGATGCAAGTATGAATGCATCCCAGTTCCGTGACCCGACAACCGCTTGGTGGAGCAATGGGCACTGGAAGATGTTGGTGGGTGGCAAGAGAAAGCATAGAGGAATGGCTCATTTGTATAGGAGCAAGGATTTTGTTTATTGGGTCAAGGCCCAGCACCCGCTTCACTCTGCCCCGAAAACGGGTATGTGGGAATGCCCGGATTTTTACCCGGTTTCATTGAAGGGCAAGGTAGGGTTGGAGACATCAAAAGATGGTGGGAATGTGAAGCATGTTTTGAAAGTGAGCCTTGATGAGACTCGGTATGACTACTACACTGTTGGAAAATACTTTCCTAAACAAGATAGGTATGTTCCTGATAAGGAATTGGTGGATGGTTGGGCTGGATTGAGATATGATTATGGGAACTTCTATGCTTCCAAAACTTTCTTTGATCCTGCAAAGAATAGAAGAATTTTGTGGGGCTGGGCTAATGAGTCTGATACTCCTAACAATGATGTTGAAAAGGGATGGGCTGGAGTTCAGGCAATCCCAAGGACTGTGTGGCTGAGTCCTGATGGGAAACAATTGTTACAATGGCCTGTTGAAGAATTGGAAACTTTAAGGGGACAAAAGGTCCAGATGAAGAATCAAAATCTCAAAGTGGGAGATCATGTTGAAGTTAAAGGAATACATGCTGCCCAGGCCGACGTTGAAGTTATATTCTCTTTCAAGAGCTTGGACAAAGCAGAGAAGTTTGACCCTAAATGGTCAAACCTTGATGCCCAAGCAATATGTGGGCTAACGGGTTCAAAAATTGGAGGTGGCATTGGCCCATTTGGGCTATTGACTTTAGCTTCACAAAACCTAGAGGAATTCACTCCTGTGTTCTTTAGGGTGTTCAAAACTCAAGGCAATAAGCATAAGGTTCTCCTGTGCTCTGATGCAAGAAGTTCCTCTTTGCAGGATAATCTGTACAAACCATCATTTGCTGGTTTTGTAGATGTAGACTTATCTGGTAAGAAGCTCTCCCTCAGGAGTTTGATTGATCATTCTGTTGTTGAGAGTTTTGGAGCTGGAGGAAAAACATGCATTACTTCTAGGGTTTACCCCACTCTAGCTGTTGACAATAAAGCTCACTTGTATGTGTTCAACAATGGGACTGAGGCTGTCACTATTGAGAGTCTCGATGCGTGGACTATGAATGCTCCTAAGTTGATGAACCAATATTCCCAGGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005618 GO:0005623 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0030312 GO:0033036 GO:0042742 GO:0043207 GO:0044464 GO:0050832 GO:0050896 GO:0051179 GO:0051704 GO:0051707 GO:0052575 GO:0052576 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

ko00052 ko00500 ko01100 map00052 map00500 map01100

Pfam Domains

Protein Families

Glyco_hydro_32C Glyco_hydro_32N

Protein Analysis

576

Amino Acids

65.04

Weight (kDa)

9.03

Isoelectric Point (pI)

31.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_32N	PF00251	51 - 364	6.2e-99	Glycosyl hydrolases family 32 N-terminal domain
Glyco_hydro_32C	PF08244	367 - 562	3.2e-23	Glycosyl hydrolases family 32 C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002984)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36190 AT3G52600 AT3G52600 AT3G52600
fragaria_vesca	FvH4_6g19270 FvH4_6g19270 FvH4_6g19271
malus_domestica	MD12G1028200.v1.1 MD14G1028500.v1.1
prunus_persica	Prupe.7G103100_v2.0.a1 Prupe.7G103200_v2.0.a1 Prupe.7G103300_v2.0.a1 Prupe.7G103400_v2.0.a1 Prupe.7G103400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0474371 RchiOBHm_Chr3g0474381
rosa_laevigata	RLG00000023930
rosa_multiflora	Rmu_co8392863.1_g000001 Rmu_co8415991.1_g000001 Rmu_co8444851.1_g000001 Rmu_sc0004507.1_g000003 Rmu_sc0004507.1_g000004
rosa_roxburghii	Rroxscaffold_6G00407310 Rroxscaffold_6G00407320
rosa_rugosa	Rorug03G0140200 Rorug03G0140300 Rorug03G0140400 Rorug03G0140500
rosa_samantha	Rh3AG191100 Rh3AG191200 Rh3BG220300 Rh3BG220400 Rh3CG215600 Rh3CG215700 Rh3DG216000 Rh3DG216100
rosa_wichuraiana	Rw3G017430 Rw3G017440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	15, 171
AccI	GTMKAC	2 cut(s)	90, 1497
AccIII	TCCGGA	2 cut(s)	353, 511
AciI	CCGC	6 cut(s)	309, 360, 447, 500, 555, 671
AclWI	GGATC	4 cut(s)	288, 351, 364, 938
AcsI	RAATTY	2 cut(s)	963, 1364
AfaI	GTAC	2 cut(s)	224, 1466
AfiI	CCNNNNNNNGG	7 cut(s)	15, 171, 373, 505, 561, 691, 692
AhdI	GACNNNNNGTC	1 cut(s)	1124
AjnI	CCWGG	3 cut(s)	423, 1191, 1722
AleI	CACNNNNGTG	1 cut(s)	1373
AloI	GAACNNNNNNTCC	1 cut(s)	1703
AluBI	AGCT	8 cut(s)	77, 239, 1227, 1346, 1516, 1565, 1610, 1625
AluI	AGCT	8 cut(s)	77, 239, 1227, 1346, 1516, 1565, 1610, 1625
Alw21I	GWGCWC	1 cut(s)	1430
Alw26I	GTCTC	6 cut(s)	111, 206, 277, 746, 800, 1679
AlwI	GGATC	4 cut(s)	288, 351, 364, 938
AlwNI	CAGNNNCTG	1 cut(s)	171
Ama87I	CYCGRG	1 cut(s)	373
Aor13HI	TCCGGA	2 cut(s)	353, 511
AoxI	GGCC	5 cut(s)	261, 660, 1088, 1194, 1321
ApaI	GGGCCC	1 cut(s)	265
ApeKI	GCWGC	1 cut(s)	1187
ApoI	RAATTY	2 cut(s)	963, 1364
AseI	ATTAAT	1 cut(s)	177
AspLEI	GCGC	1 cut(s)	423
AspS9I	GGNCC	8 cut(s)	182, 261, 262, 351, 427, 661, 1126, 1322
AsuC2I	CCSGG	5 cut(s)	374, 375, 413, 710, 722
AvaI	CYCGRG	1 cut(s)	373
AvaII	GGWCC	4 cut(s)	182, 351, 427, 1126
AxyI	CCTNAGG	1 cut(s)	1523
BaeGI	GKGCMC	2 cut(s)	265, 576
BamHI	GGATCC	1 cut(s)	356
BanII	GRGCYC	1 cut(s)	265
Bbv12I	GWGCWC	1 cut(s)	1430
BbvI	GCAGC	1 cut(s)	1174
BccI	CCATC	7 cut(s)	328, 395, 758, 878, 1014, 1061, 1480
BciT130I	CCWGG	3 cut(s)	425, 1193, 1724
BclI	TGATCA	2 cut(s)	285, 1537
BcnI	CCSGG	5 cut(s)	374, 375, 413, 710, 722
BcoDI	GTCTC	6 cut(s)	111, 206, 277, 746, 800, 1679
BfaI	CTAG	5 cut(s)	503, 1358, 1590, 1607, 1729
BfoI	RGCGCY	1 cut(s)	424
BisI	GCNGC	1 cut(s)	1188
BlsI	GCNGC	1 cut(s)	1189
Bme1390I	CCNGG	8 cut(s)	374, 375, 413, 425, 710, 722, 1193, 1724
Bme18I	GGWCC	4 cut(s)	182, 351, 427, 1126
BmeRI	GACNNNNNGTC	1 cut(s)	1124
BmeT110I	CYCGRG	1 cut(s)	373
BmgT120I	GGNCC	8 cut(s)	182, 261, 262, 351, 427, 661, 1126, 1322
BmiI	GGNNCC	4 cut(s)	20, 263, 358, 510
BmrFI	CCNGG	8 cut(s)	374, 375, 413, 425, 710, 722, 1193, 1724
BmrI	ACTGGG	1 cut(s)	529
BmsI	GCATC	5 cut(s)	505, 539, 1261, 1423, 1669
BmuI	ACTGGG	1 cut(s)	529
BpmI	CTGGAG	2 cut(s)	1047, 1587
BpuEI	CTTGAG	1 cut(s)	1383
BpuMI	CCSGG	5 cut(s)	374, 375, 413, 710, 722
BsaI	GGTCTC	1 cut(s)	206
BsaJI	CCNNGG	4 cut(s)	373, 1043, 1191, 1722
BsaWI	WCCGGW	3 cut(s)	353, 401, 511
BsaXI	ACNNNNNCTCC	2 cut(s)	1149, 1179
Bsc4I	CCNNNNNNNGG	7 cut(s)	15, 171, 373, 505, 561, 691, 692
Bse1I	ACTGG	4 cut(s)	148, 176, 535, 581
Bse21I	CCTNAGG	1 cut(s)	1523
Bse3DI	GCAATG	1 cut(s)	574
BseAI	TCCGGA	2 cut(s)	353, 511
BseBI	CCWGG	3 cut(s)	425, 1193, 1724
BseDI	CCNNGG	4 cut(s)	373, 1043, 1191, 1722
BseGI	GGATG	6 cut(s)	320, 390, 520, 530, 889, 1025
BseLI	CCNNNNNNNGG	7 cut(s)	15, 171, 373, 505, 561, 691, 692
BseMI	GCAATG	1 cut(s)	574
BseMII	CTCAG	3 cut(s)	1049, 1537, 1644
BseNI	ACTGG	4 cut(s)	148, 176, 535, 581
BseSI	GKGCMC	2 cut(s)	265, 576
BseXI	GCAGC	1 cut(s)	1174
BseYI	CCCAGC	3 cut(s)	164, 663, 975
BshFI	GGCC	5 cut(s)	263, 662, 1090, 1196, 1323
BsiHKAI	GWGCWC	1 cut(s)	1430
BsiHKCI	CYCGRG	1 cut(s)	373
BsiSI	CCGG	7 cut(s)	354, 374, 402, 413, 512, 710, 722
BslFI	GGGAC	2 cut(s)	1131, 1663
BslI	CCNNNNNNNGG	7 cut(s)	15, 171, 373, 505, 561, 691, 692
BsmAI	GTCTC	6 cut(s)	111, 206, 277, 746, 800, 1679
BsmFI	GGGAC	2 cut(s)	1131, 1663
BsmI	GAATGC	3 cut(s)	532, 710, 1699
BsnI	GGCC	5 cut(s)	263, 662, 1090, 1196, 1323
Bso31I	GGTCTC	1 cut(s)	206
BsoBI	CYCGRG	1 cut(s)	373
Bsp120I	GGGCCC	1 cut(s)	261
Bsp1286I	GDGCHC	3 cut(s)	265, 576, 1430
Bsp13I	TCCGGA	2 cut(s)	353, 511
Bsp1407I	TGTACA	1 cut(s)	1464
Bsp143I	GATC	7 cut(s)	123, 280, 285, 356, 943, 1159, 1537
BspACI	CCGC	6 cut(s)	309, 360, 447, 500, 555, 671
BspANI	GGCC	5 cut(s)	263, 662, 1090, 1196, 1323
BspCNI	CTCAG	3 cut(s)	1050, 1536, 1645
BspEI	TCCGGA	2 cut(s)	353, 511
BspLI	GGNNCC	4 cut(s)	20, 263, 358, 510
BspPI	GGATC	4 cut(s)	288, 351, 364, 938
BspTNI	GGTCTC	1 cut(s)	206
BsrDI	GCAATG	1 cut(s)	574
BsrGI	TGTACA	1 cut(s)	1464
BsrI	ACTGG	4 cut(s)	148, 176, 535, 581
BssECI	CCNNGG	4 cut(s)	373, 1043, 1191, 1722
BssMI	GATC	7 cut(s)	123, 280, 285, 356, 943, 1159, 1537
BssNAI	GTATAC	1 cut(s)	91
BssT1I	CCWWGG	1 cut(s)	1043
Bst1107I	GTATAC	1 cut(s)	91
Bst2UI	CCWGG	3 cut(s)	425, 1193, 1724
Bst4CI	ACNGT	2 cut(s)	829, 1051
Bst6I	CTCTTC	1 cut(s)	114
BstAUI	TGTACA	1 cut(s)	1464
BstC8I	GCNNGC	2 cut(s)	297, 447
BstDEI	CTNAG	5 cut(s)	276, 1058, 1523, 1653, 1701
BstF5I	GGATG	6 cut(s)	320, 390, 520, 530, 889, 1025
BstH2I	RGCGCY	1 cut(s)	424
BstHHI	GCGC	1 cut(s)	423
BstKTI	GATC	7 cut(s)	126, 283, 288, 359, 946, 1162, 1540
BstMAI	GTCTC	6 cut(s)	111, 206, 277, 746, 800, 1679
BstMBI	GATC	7 cut(s)	123, 280, 285, 356, 943, 1159, 1537
BstMWI	GCNNNNNNNGC	2 cut(s)	446, 1193
BstNI	CCWGG	3 cut(s)	425, 1193, 1724
BstNSI	RCATGY	3 cut(s)	785, 1187, 1581
BstSCI	CCNGG	8 cut(s)	372, 373, 411, 423, 708, 720, 1191, 1722
BstSLI	GKGCMC	2 cut(s)	265, 576
BstV1I	GCAGC	1 cut(s)	1174
BstX2I	RGATCY	2 cut(s)	280, 356
BstXI	CCANNNNNNTGG	1 cut(s)	143
BstYI	RGATCY	2 cut(s)	280, 356
BstZ17I	GTATAC	1 cut(s)	91
Bsu36I	CCTNAGG	1 cut(s)	1523
BsuRI	GGCC	5 cut(s)	263, 662, 1090, 1196, 1323
BtsCI	GGATG	6 cut(s)	320, 390, 520, 530, 889, 1025
BtsIMutI	CAGTG	3 cut(s)	169, 574, 825
Cac8I	GCNNGC	2 cut(s)	297, 447
CaiI	CAGNNNCTG	1 cut(s)	171
CfoI	GCGC	1 cut(s)	423
Cfr13I	GGNCC	8 cut(s)	182, 261, 262, 351, 427, 661, 1126, 1322
Cfr9I	CCCGGG	1 cut(s)	373
Csp6I	GTAC	2 cut(s)	223, 1465
CviAII	CATG	4 cut(s)	782, 1163, 1184, 1578
CviQI	GTAC	2 cut(s)	223, 1465
DdeI	CTNAG	5 cut(s)	276, 1058, 1523, 1653, 1701
DpnI	GATC	7 cut(s)	125, 282, 287, 358, 945, 1161, 1539
DpnII	GATC	7 cut(s)	123, 280, 285, 356, 943, 1159, 1537
DriI	GACNNNNNGTC	1 cut(s)	1124
Eam1104I	CTCTTC	1 cut(s)	114
Eam1105I	GACNNNNNGTC	1 cut(s)	1124
EarI	CTCTTC	1 cut(s)	114
EciI	GGCGGA	1 cut(s)	349
Eco130I	CCWWGG	1 cut(s)	1043
Eco24I	GRGCYC	1 cut(s)	265
Eco31I	GGTCTC	1 cut(s)	206
Eco47I	GGWCC	4 cut(s)	182, 351, 427, 1126
Eco81I	CCTNAGG	1 cut(s)	1523
Eco88I	CYCGRG	1 cut(s)	373
EcoRI	GAATTC	1 cut(s)	1364
EcoRII	CCWGG	3 cut(s)	423, 1191, 1722
EcoT14I	CCWWGG	1 cut(s)	1043
EcoT22I	ATGCAT	2 cut(s)	532, 1583
EcoT38I	GRGCYC	1 cut(s)	265
ErhI	CCWWGG	1 cut(s)	1043
FaeI	CATG	4 cut(s)	785, 1166, 1187, 1581
FalI	AAGNNNNNCTT	4 cut(s)	783, 815, 1432, 1464
FaqI	GGGAC	2 cut(s)	1131, 1663
FatI	CATG	4 cut(s)	781, 1162, 1183, 1577
FauI	CCCGC	4 cut(s)	316, 454, 507, 678
FbaI	TGATCA	2 cut(s)	285, 1537
FblI	GTMKAC	2 cut(s)	90, 1497
Fnu4HI	GCNGC	1 cut(s)	1188
FokI	GGATG	6 cut(s)	307, 377, 517, 527, 896, 1032
FriOI	GRGCYC	1 cut(s)	265
Fsp4HI	GCNGC	1 cut(s)	1188
FspBI	CTAG	5 cut(s)	503, 1358, 1590, 1607, 1729
GlaI	GCGC	1 cut(s)	422
GluI	GCNGC	1 cut(s)	1188
GsaI	CCCAGC	3 cut(s)	168, 667, 979
GsuI	CTGGAG	2 cut(s)	1047, 1587
HaeII	RGCGCY	1 cut(s)	424
HaeIII	GGCC	5 cut(s)	263, 662, 1090, 1196, 1323
HapII	CCGG	7 cut(s)	354, 374, 402, 413, 512, 710, 722
HhaI	GCGC	1 cut(s)	423
Hin1II	CATG	4 cut(s)	785, 1166, 1187, 1581
Hin6I	GCGC	1 cut(s)	421
HinP1I	GCGC	1 cut(s)	421
HincII	GTYRAC	1 cut(s)	1615
HindII	GTYRAC	1 cut(s)	1615
HindIII	AAGCTT	1 cut(s)	75
HinfI	GANTC	6 cut(s)	69, 808, 986, 1060, 1138, 1672
HpaII	CCGG	7 cut(s)	354, 374, 402, 413, 512, 710, 722
Hpy166II	GTNNAC	6 cut(s)	91, 136, 1498, 1597, 1615, 1686
Hpy188I	TCNGA	4 cut(s)	285, 460, 991, 1432
Hpy188III	TCNNGA	8 cut(s)	354, 512, 866, 1064, 1129, 1222, 1525, 1676
Hpy8I	GTNNAC	6 cut(s)	91, 136, 1498, 1597, 1615, 1686
Hpy99I	CGWCG	1 cut(s)	1202
HpyAV	CCTTC	3 cut(s)	32, 377, 727
HpyCH4III	ACNGT	2 cut(s)	829, 1051
HpyCH4IV	ACGT	1 cut(s)	1200
HpyCH4V	TGCA	6 cut(s)	518, 530, 950, 1436, 1453, 1581
HpyF10VI	GCNNNNNNNGC	2 cut(s)	446, 1193
HpyF3I	CTNAG	5 cut(s)	276, 1058, 1523, 1653, 1701
HpySE526I	ACGT	1 cut(s)	1200
Hsp92II	CATG	4 cut(s)	785, 1166, 1187, 1581
HspAI	GCGC	1 cut(s)	421
Kpn2I	TCCGGA	2 cut(s)	353, 511
Ksp22I	TGATCA	2 cut(s)	285, 1537
Kzo9I	GATC	7 cut(s)	123, 280, 285, 356, 943, 1159, 1537
LmnI	GCTCC	5 cut(s)	236, 564, 633, 1562, 1702
Lsp1109I	GCAGC	1 cut(s)	1174
LweI	GCATC	5 cut(s)	505, 539, 1261, 1423, 1669
MaeI	CTAG	5 cut(s)	503, 1358, 1590, 1607, 1729
MaeII	ACGT	1 cut(s)	1200
MaeIII	GTNAC	3 cut(s)	542, 1080, 1660
MalI	GATC	7 cut(s)	125, 282, 287, 358, 945, 1161, 1539
MboI	GATC	7 cut(s)	123, 280, 285, 356, 943, 1159, 1537
MboII	GAAGA	6 cut(s)	101, 133, 592, 972, 1109, 1147
MfeI	CAATTG	2 cut(s)	289, 1076
MflI	RGATCY	2 cut(s)	280, 356
MhlI	GDGCHC	3 cut(s)	265, 576, 1430
MluCI	AATT	7 cut(s)	289, 875, 963, 1076, 1100, 1305, 1364
MlyI	GAGTC	5 cut(s)	78, 802, 995, 1069, 1681
MmeI	TCCRAC	3 cut(s)	483, 729, 811
MnlI	CCTC	9 cut(s)	171, 404, 605, 1304, 1354, 1456, 1532, 1562, 1648
Mph1103I	ATGCAT	2 cut(s)	532, 1583
MroI	TCCGGA	2 cut(s)	353, 511
MseI	TTAA	4 cut(s)	177, 483, 1112, 1173
MslI	CAYNNNNRTG	2 cut(s)	1373, 1632
MspI	CCGG	7 cut(s)	354, 374, 402, 413, 512, 710, 722
MspR9I	CCNGG	8 cut(s)	374, 375, 413, 425, 710, 722, 1193, 1724
MunI	CAATTG	2 cut(s)	289, 1076
Mva1269I	GAATGC	3 cut(s)	532, 710, 1699
MvaI	CCWGG	3 cut(s)	425, 1193, 1724
MwoI	GCNNNNNNNGC	2 cut(s)	446, 1193
NciI	CCSGG	5 cut(s)	374, 375, 413, 710, 722
NdeII	GATC	7 cut(s)	123, 280, 285, 356, 943, 1159, 1537
NlaIII	CATG	4 cut(s)	785, 1166, 1187, 1581
NlaIV	GGNNCC	4 cut(s)	20, 263, 358, 510
NmuCI	GTSAC	2 cut(s)	542, 1660
NsiI	ATGCAT	2 cut(s)	532, 1583
NspI	RCATGY	3 cut(s)	785, 1187, 1581
OliI	CACNNNNGTG	1 cut(s)	1373
PctI	GAATGC	3 cut(s)	532, 710, 1699
PfeI	GAWTC	1 cut(s)	1138
PflMI	CCANNNNNTGG	2 cut(s)	15, 171
PkrI	GCNGC	1 cut(s)	1189
PleI	GAGTC	5 cut(s)	77, 802, 994, 1068, 1680
PpsI	GAGTC	5 cut(s)	77, 802, 994, 1068, 1680
PshBI	ATTAAT	1 cut(s)	177
Psp6I	CCWGG	3 cut(s)	423, 1191, 1722
PspFI	CCCAGC	3 cut(s)	164, 663, 975
PspGI	CCWGG	3 cut(s)	423, 1191, 1722
PspN4I	GGNNCC	4 cut(s)	20, 263, 358, 510
PspOMI	GGGCCC	1 cut(s)	261
PspPI	GGNCC	8 cut(s)	182, 261, 262, 351, 427, 661, 1126, 1322
PstNI	CAGNNNCTG	1 cut(s)	171
PsuI	RGATCY	2 cut(s)	280, 356
RsaI	GTAC	2 cut(s)	224, 1466
RsaNI	GTAC	2 cut(s)	223, 1465
RseI	CAYNNNNRTG	2 cut(s)	1373, 1632
SaqAI	TTAA	4 cut(s)	177, 483, 1112, 1173
SatI	GCNGC	1 cut(s)	1188
Sau3AI	GATC	7 cut(s)	123, 280, 285, 356, 943, 1159, 1537
Sau96I	GGNCC	8 cut(s)	182, 261, 262, 351, 427, 661, 1126, 1322
SchI	GAGTC	5 cut(s)	78, 802, 995, 1069, 1681
ScrFI	CCNGG	8 cut(s)	374, 375, 413, 425, 710, 722, 1193, 1724
SduI	GDGCHC	3 cut(s)	265, 576, 1430
SfaNI	GCATC	5 cut(s)	505, 539, 1261, 1423, 1669
SinI	GGWCC	4 cut(s)	182, 351, 427, 1126
SmaI	CCCGGG	1 cut(s)	375
SmiMI	CAYNNNNRTG	2 cut(s)	1373, 1632
SmlI	CTYRAG	1 cut(s)	1398
SmoI	CTYRAG	1 cut(s)	1398
Sse9I	AATT	7 cut(s)	289, 875, 963, 1076, 1100, 1305, 1364
SsiI	CCGC	6 cut(s)	309, 360, 447, 500, 555, 671
SspI	AATATT	1 cut(s)	1718
SspMI	CTAG	5 cut(s)	503, 1358, 1590, 1607, 1729
StyD4I	CCNGG	8 cut(s)	372, 373, 411, 423, 708, 720, 1191, 1722
StyI	CCWWGG	1 cut(s)	1043
TaaI	ACNGT	2 cut(s)	829, 1051
TaiI	ACGT	1 cut(s)	1203
TaqI	TCGA	2 cut(s)	72, 1677
TasI	AATT	7 cut(s)	289, 875, 963, 1076, 1100, 1305, 1364
TatI	WGTACW	2 cut(s)	222, 1464
TfiI	GAWTC	1 cut(s)	1138
Tru1I	TTAA	4 cut(s)	177, 483, 1112, 1173
Tru9I	TTAA	4 cut(s)	177, 483, 1112, 1173
TscAI	CASTG	3 cut(s)	176, 581, 832
TseFI	GTSAC	2 cut(s)	542, 1660
TseI	GCWGC	1 cut(s)	1187
Tsp45I	GTSAC	2 cut(s)	542, 1660
TspDTI	ATGAA	5 cut(s)	539, 717, 1148, 1706, 1724
TspGWI	ACGGA	1 cut(s)	530
TspMI	CCCGGG	1 cut(s)	373
TspRI	CASTG	3 cut(s)	176, 581, 832
Van91I	CCANNNNNTGG	2 cut(s)	15, 171
VpaK11BI	GGWCC	4 cut(s)	182, 351, 427, 1126
VspI	ATTAAT	1 cut(s)	177
XapI	RAATTY	2 cut(s)	963, 1364
XceI	RCATGY	3 cut(s)	785, 1187, 1581
XcmI	CCANNNNNNNNNTGG	3 cut(s)	176, 1050, 1283
XmaI	CCCGGG	1 cut(s)	373
XmiI	GTMKAC	2 cut(s)	90, 1497
XspI	CTAG	5 cut(s)	503, 1358, 1590, 1607, 1729
Zsp2I	ATGCAT	2 cut(s)	532, 1583

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.