Prupe.7G103400_v2.0.a1

Belongs to the glycosyl hydrolase 32 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
13299771 .. 13304593
4823 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G103400.2

Sequence Viewer

Length: 1737 bp
ATGGATACTTTAAAAAAGTTCCTTCAAGTTCTTTTACTTGCTTGTTGTTGTGTTTTTGTCATAAAAAACGACGCCGTCGAAGCATCACACAACGTTTACCCCGAGTTTCAGTCTCTTGCTGCCGTCAAAGTCAACCGAGTCCACAGAACTGCGTTTCACTTTCAACCTCCAAGCAACTGGATTAACGACCCTAATGGACCTATGTACTTTGGTGGTCTGTATCACTTGTTCTATCAGTACAATCCCAAAGGTGCGGTTTGGGGCAACATTGTTTGGGCCCATTCAGTGTCCAAGGATCTGATCAATTGGGAAGCTCTTGAGCCTGCAATATACCCGTCCAAGCCCTTTGACATAAATGGATGTTGGTCCGGGTCCGCCACTATTCTCCCCGGCAACAAGCCCATTATCCTCTACACTGGAATCGACCCCCAAAACCGCCAGGTCCAAAACTATGCCATCCCGGCAAACGCATCCGACCCGTACCTCCGCCAATGGATCAAGCCCGATAACAACCCTCTAGTGGTCCCAGATGCCGGTATGAACGCAACCGCATTCCGCGACCCGACAACAGCTTGGTGGATTGATGGGCATTGGAAGATGTTGGTGGGTGGCAGAAGGAAGCATAGAGGAGTGGCCCATTTGTATAGGAGCAAGGACTTCATGCATTGGGTCAAGGCCCATCACCCATTTCACTCGGCTCCCCATACGGGTATGTGGGAATGCCCGGATTTTTACCCGGTTCCATTGGTTGGCAAATTTGGGTTGGACACATCAAATTTTGGTGTGGATGTTAAGCATGTTATGAAAGTGAGCCTTGATGAGACTAGGTATGAATATTACACAATTGGAAAATATTTTCTTGAGAAAGATAGGTATGTTCCTGATAAAGCCTTGGTGGATGGTTGGTCTGGGTTGAGATATGACTATGGCAACTTTTATGCATCCAAGAGTTTCTTTGATCCTGCAAAGAGTAGGAGAATTTTGTGGGGGTGGGCTAATGAGTCTGATACATCTCAAGAAGATGTTGCTAAGGGATGGGCCGGAATTCAGACAATACCAAGGGTGGTGTGGCTCAGTCCAGATAGGAAACAATTGTTGCAATGGCCTATTGAAGAACTAGAAACTCTAAGAGGGCAAAAAGTCGAGTTGAACATTCAAAAGCTCAAACTAGGAGATTATGTTGAAGTTAAAGGAATAACTGCGGCTCAGGCCGATGTTGATGTTCTCTTCTCAATCCCTAGCTTGGACAAAGCCGAAGATTTTGACCCTAGCTGGACCAGCCTCGATGCCCAAAGACTTTGTGGCCTAAAGGGTTCAAAAGTTCAAGGTGGCCTCGGGCCTTTTGGACTTTTGACATTAGCATCACAAAACCTAGAGGAATTCACTCCTGTTTTCTTCAGGATTTTTAAAGCTCAAGGCAGCAGGCACCTAGTTCTCATGTGCTCTGATGCAACAAGTTCGTCTTTGCAGAACAACCTGTACAAACCATCATTTGCTGGCTTTGTGGATATAGATTTGACTTCTTACAAGAAGCTTTCCCTCAGGAGTTTGATTGATCATTCTGTTGTTGAAAGTTTTGGACCTGGAGCAAAAACATGCATCACATCTAGGGTTTATCCAACTCTAGCAGTTAACAAGGAAGCTCACTTGTTTGTGTTCAACAATGGGACTGAGACTATTACTGTAGAGAGCCTCACTGCATGGAGTATGAATGCTCCTAAACAGATGAACGCATAG

Protein Analysis

579

Amino Acids

65.25

Weight (kDa)

7.98

Isoelectric Point (pI)

32.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1425
AccB7I CCANNNNNTGG 1 cut(s) 749
AccII CGCG 1 cut(s) 558
AciI CCGC 7 cut(s) 254, 375, 436, 487, 549, 556, 1202
AclI AACGTT 1 cut(s) 93
AclWI GGATC 3 cut(s) 303, 503, 953
AcsI RAATTY 5 cut(s) 755, 775, 978, 1044, 1379
AcuI CTGAAG 1 cut(s) 1381
AcyI GRCGYC 1 cut(s) 72
AfaI GTAC 4 cut(s) 206, 239, 482, 1481
AfiI CCNNNNNNNGG 5 cut(s) 520, 533, 707, 749, 1243
AjnI CCWGG 2 cut(s) 438, 1582
AluBI AGCT 8 cut(s) 314, 572, 1162, 1242, 1272, 1412, 1534, 1643
AluI AGCT 8 cut(s) 314, 572, 1162, 1242, 1272, 1412, 1534, 1643
Alw21I GWGCWC 1 cut(s) 1445
Alw26I GTCTC 3 cut(s) 117, 815, 1667
AlwI GGATC 3 cut(s) 303, 503, 953
Ama87I CYCGRG 2 cut(s) 101, 1334
AoxI GGCC 9 cut(s) 276, 633, 675, 1038, 1103, 1209, 1303, 1330, 1337
ApaI GGGCCC 1 cut(s) 280
ApeKI GCWGC 2 cut(s) 119, 1419
ApoI RAATTY 5 cut(s) 755, 775, 978, 1044, 1379
AsuC2I CCSGG 5 cut(s) 370, 390, 461, 725, 737
AsuHPI GGTGA 1 cut(s) 674
AvaI CYCGRG 2 cut(s) 101, 1334
AvaII GGWCC 7 cut(s) 197, 366, 372, 442, 523, 1275, 1580
AxyI CCTNAGG 1 cut(s) 1541
BaeGI GKGCMC 1 cut(s) 280
BanI GGYRCC 1 cut(s) 1425
BanII GRGCYC 1 cut(s) 280
Bbv12I GWGCWC 1 cut(s) 1445
BbvI GCAGC 2 cut(s) 106, 1431
BccI CCATC 6 cut(s) 464, 578, 687, 893, 1029, 1495
BceAI ACGGC 2 cut(s) 59, 107
BcgI CGANNNNNNTGC 2 cut(s) 1440, 1474
BciT130I CCWGG 2 cut(s) 440, 1584
BclI TGATCA 2 cut(s) 300, 1555
BcnI CCSGG 5 cut(s) 370, 390, 461, 725, 737
BcoDI GTCTC 3 cut(s) 117, 815, 1667
BfmI CTRYAG 1 cut(s) 1683
BglI GCCNNNNNGGC 1 cut(s) 461
BisI GCNGC 3 cut(s) 120, 1203, 1420
BlsI GCNGC 3 cut(s) 121, 1204, 1421
Bme1390I CCNGG 7 cut(s) 370, 390, 440, 461, 725, 737, 1584
Bme18I GGWCC 7 cut(s) 197, 366, 372, 442, 523, 1275, 1580
BmeT110I CYCGRG 2 cut(s) 101, 1334
BmiI GGNNCC 6 cut(s) 278, 373, 525, 699, 741, 1427
BmrFI CCNGG 7 cut(s) 370, 390, 440, 461, 725, 737, 1584
BmsI GCATC 8 cut(s) 92, 479, 520, 950, 1276, 1370, 1438, 1608
BpmI CTGGAG 1 cut(s) 1605
Bpu10I CCTNAGC 2 cut(s) 1029, 1206
BpuEI CTTGAG 4 cut(s) 338, 881, 999, 1398
BpuMI CCSGG 5 cut(s) 370, 390, 461, 725, 737
BsaHI GRCGYC 1 cut(s) 72
BsaJI CCNNGG 5 cut(s) 291, 388, 891, 1058, 1333
BsaXI ACNNNNNCTCC 2 cut(s) 1164, 1194
Bsc4I CCNNNNNNNGG 5 cut(s) 520, 533, 707, 749, 1243
Bse118I RCCGGY 1 cut(s) 533
Bse1I ACTGG 2 cut(s) 182, 421
Bse21I CCTNAGG 1 cut(s) 1541
Bse3DI GCAATG 1 cut(s) 1106
BseBI CCWGG 2 cut(s) 440, 1584
BseDI CCNNGG 5 cut(s) 291, 388, 891, 1058, 1333
BseGI GGATG 7 cut(s) 365, 456, 470, 793, 904, 941, 1040
BseLI CCNNNNNNNGG 5 cut(s) 520, 533, 707, 749, 1243
BseMI GCAATG 1 cut(s) 1106
BseMII CTCAG 4 cut(s) 1087, 1220, 1555, 1662
BseNI ACTGG 2 cut(s) 182, 421
BseRI GAGGAG 1 cut(s) 642
BseSI GKGCMC 1 cut(s) 280
BseXI GCAGC 2 cut(s) 106, 1431
Bsh1236I CGCG 1 cut(s) 558
BshFI GGCC 9 cut(s) 278, 635, 677, 1040, 1105, 1211, 1305, 1332, 1339
BshNI GGYRCC 1 cut(s) 1425
BsiHKAI GWGCWC 1 cut(s) 1445
BsiHKCI CYCGRG 2 cut(s) 101, 1334
BsiSI CCGG 7 cut(s) 369, 390, 461, 534, 725, 737, 1041
BslFI GGGAC 2 cut(s) 509, 1681
BslI CCNNNNNNNGG 5 cut(s) 520, 533, 707, 749, 1243
BsmAI GTCTC 3 cut(s) 117, 815, 1667
BsmFI GGGAC 2 cut(s) 509, 1681
BsmI GAATGC 3 cut(s) 551, 725, 1717
BsnI GGCC 9 cut(s) 278, 635, 677, 1040, 1105, 1211, 1305, 1332, 1339
BsoBI CYCGRG 2 cut(s) 101, 1334
Bsp120I GGGCCC 1 cut(s) 276
Bsp1286I GDGCHC 2 cut(s) 280, 1445
Bsp1407I TGTACA 1 cut(s) 1479
Bsp143I GATC 5 cut(s) 295, 300, 495, 958, 1555
BspACI CCGC 7 cut(s) 254, 375, 436, 487, 549, 556, 1202
BspANI GGCC 9 cut(s) 278, 635, 677, 1040, 1105, 1211, 1305, 1332, 1339
BspCNI CTCAG 4 cut(s) 1086, 1219, 1554, 1663
BspFNI CGCG 1 cut(s) 558
BspLI GGNNCC 6 cut(s) 278, 373, 525, 699, 741, 1427
BspPI GGATC 3 cut(s) 303, 503, 953
BspT107I GGYRCC 1 cut(s) 1425
BsrDI GCAATG 1 cut(s) 1106
BsrFI RCCGGY 1 cut(s) 533
BsrGI TGTACA 1 cut(s) 1479
BsrI ACTGG 2 cut(s) 182, 421
BssAI RCCGGY 1 cut(s) 533
BssECI CCNNGG 5 cut(s) 291, 388, 891, 1058, 1333
BssMI GATC 5 cut(s) 295, 300, 495, 958, 1555
BssNI GRCGYC 1 cut(s) 72
BssT1I CCWWGG 3 cut(s) 291, 891, 1058
Bst2UI CCWGG 2 cut(s) 440, 1584
Bst4CI ACNGT 1 cut(s) 1684
Bst6I CTCTTC 1 cut(s) 1232
BstACI GRCGYC 1 cut(s) 72
BstAUI TGTACA 1 cut(s) 1479
BstC8I GCNNGC 3 cut(s) 324, 1424, 1498
BstDEI CTNAG 6 cut(s) 1029, 1073, 1127, 1206, 1541, 1671
BstF5I GGATG 7 cut(s) 365, 456, 470, 793, 904, 941, 1040
BstFNI CGCG 1 cut(s) 558
BstKTI GATC 5 cut(s) 298, 303, 498, 961, 1558
BstMAI GTCTC 3 cut(s) 117, 815, 1667
BstMBI GATC 5 cut(s) 295, 300, 495, 958, 1555
BstMWI GCNNNNNNNGC 4 cut(s) 80, 461, 1208, 1278
BstNI CCWGG 2 cut(s) 440, 1584
BstNSI RCATGY 2 cut(s) 800, 1599
BstSCI CCNGG 7 cut(s) 368, 388, 438, 459, 723, 735, 1582
BstSFI CTRYAG 1 cut(s) 1683
BstSLI GKGCMC 1 cut(s) 280
BstUI CGCG 1 cut(s) 558
BstV1I GCAGC 2 cut(s) 106, 1431
BstX2I RGATCY 1 cut(s) 295
BstXI CCANNNNNNTGG 1 cut(s) 177
BstYI RGATCY 1 cut(s) 295
Bsu36I CCTNAGG 1 cut(s) 1541
BsuRI GGCC 9 cut(s) 278, 635, 677, 1040, 1105, 1211, 1305, 1332, 1339
BtsCI GGATG 7 cut(s) 365, 456, 470, 793, 904, 941, 1040
BtsI GCAGTG 1 cut(s) 1695
BtsIMutI CAGTG 3 cut(s) 291, 414, 1695
Cac8I GCNNGC 3 cut(s) 324, 1424, 1498
Cfr10I RCCGGY 1 cut(s) 533
CseI GACGC 1 cut(s) 80
Csp6I GTAC 4 cut(s) 205, 238, 481, 1480
CviAII CATG 5 cut(s) 661, 797, 1438, 1596, 1701
CviQI GTAC 4 cut(s) 205, 238, 481, 1480
DdeI CTNAG 6 cut(s) 1029, 1073, 1127, 1206, 1541, 1671
DpnI GATC 5 cut(s) 297, 302, 497, 960, 1557
DpnII GATC 5 cut(s) 295, 300, 495, 958, 1555
DraI TTTAAA 2 cut(s) 12, 1408
Eam1104I CTCTTC 1 cut(s) 1232
EarI CTCTTC 1 cut(s) 1232
EciI GGCGGA 2 cut(s) 364, 476
Eco130I CCWWGG 3 cut(s) 291, 891, 1058
Eco24I GRGCYC 1 cut(s) 280
Eco47I GGWCC 7 cut(s) 197, 366, 372, 442, 523, 1275, 1580
Eco57I CTGAAG 1 cut(s) 1381
Eco81I CCTNAGG 1 cut(s) 1541
Eco88I CYCGRG 2 cut(s) 101, 1334
EcoRI GAATTC 2 cut(s) 1044, 1379
EcoRII CCWGG 2 cut(s) 438, 1582
EcoT14I CCWWGG 3 cut(s) 291, 891, 1058
EcoT22I ATGCAT 3 cut(s) 666, 943, 1601
EcoT38I GRGCYC 1 cut(s) 280
ErhI CCWWGG 3 cut(s) 291, 891, 1058
FaeI CATG 5 cut(s) 664, 800, 1441, 1599, 1704
FalI AAGNNNNNCTT 6 cut(s) 798, 830, 938, 970, 1447, 1479
FaqI GGGAC 2 cut(s) 509, 1681
FatI CATG 5 cut(s) 660, 796, 1437, 1595, 1700
FbaI TGATCA 2 cut(s) 300, 1555
Fnu4HI GCNGC 3 cut(s) 120, 1203, 1420
FokI GGATG 7 cut(s) 372, 443, 457, 800, 911, 928, 1047
FriOI GRGCYC 1 cut(s) 280
Fsp4HI GCNGC 3 cut(s) 120, 1203, 1420
GluI GCNGC 3 cut(s) 120, 1203, 1420
GsuI CTGGAG 1 cut(s) 1605
HaeIII GGCC 9 cut(s) 278, 635, 677, 1040, 1105, 1211, 1305, 1332, 1339
HapII CCGG 7 cut(s) 369, 390, 461, 534, 725, 737, 1041
HgaI GACGC 1 cut(s) 80
Hin1I GRCGYC 1 cut(s) 72
Hin1II CATG 5 cut(s) 664, 800, 1441, 1599, 1704
HincII GTYRAC 2 cut(s) 133, 1633
HindII GTYRAC 2 cut(s) 133, 1633
HindIII AAGCTT 1 cut(s) 1532
HinfI GANTC 3 cut(s) 138, 420, 1001
HpaI GTTAAC 1 cut(s) 1633
HpaII CCGG 7 cut(s) 369, 390, 461, 534, 725, 737, 1041
HphI GGTGA 1 cut(s) 674
Hpy166II GTNNAC 4 cut(s) 97, 133, 142, 1633
Hpy188I TCNGA 5 cut(s) 300, 475, 1006, 1050, 1447
Hpy188III TCNNGA 7 cut(s) 317, 860, 881, 1016, 1079, 1399, 1543
Hpy8I GTNNAC 4 cut(s) 97, 133, 142, 1633
Hpy99I CGWCG 2 cut(s) 74, 80
HpyAV CCTTC 2 cut(s) 32, 609
HpyCH4III ACNGT 1 cut(s) 1684
HpyCH4IV ACGT 1 cut(s) 93
HpyCH4V TGCA 9 cut(s) 326, 664, 941, 965, 1099, 1451, 1468, 1599, 1700
HpyF10VI GCNNNNNNNGC 4 cut(s) 80, 461, 1208, 1278
HpyF3I CTNAG 6 cut(s) 1029, 1073, 1127, 1206, 1541, 1671
HpySE526I ACGT 1 cut(s) 93
Hsp92I GRCGYC 1 cut(s) 72
Hsp92II CATG 5 cut(s) 664, 800, 1441, 1599, 1704
Ksp22I TGATCA 2 cut(s) 300, 1555
KspAI GTTAAC 1 cut(s) 1633
Kzo9I GATC 5 cut(s) 295, 300, 495, 958, 1555
LmnI GCTCC 4 cut(s) 648, 703, 1586, 1720
Lsp1109I GCAGC 2 cut(s) 106, 1431
LweI GCATC 8 cut(s) 92, 479, 520, 950, 1276, 1370, 1438, 1608
MaeII ACGT 1 cut(s) 93
MalI GATC 5 cut(s) 297, 302, 497, 960, 1557
MboI GATC 5 cut(s) 295, 300, 495, 958, 1555
MboII GAAGA 6 cut(s) 607, 1031, 1124, 1219, 1268, 1387
MfeI CAATTG 3 cut(s) 304, 843, 1091
MflI RGATCY 1 cut(s) 295
MhlI GDGCHC 2 cut(s) 280, 1445
MluCI AATT 8 cut(s) 304, 755, 775, 843, 978, 1044, 1091, 1379
MlyI GAGTC 2 cut(s) 147, 1010
MmeI TCCRAC 3 cut(s) 498, 744, 1643
Mph1103I ATGCAT 3 cut(s) 666, 943, 1601
MseI TTAA 6 cut(s) 11, 183, 792, 1188, 1407, 1632
MspI CCGG 7 cut(s) 369, 390, 461, 534, 725, 737, 1041
MspR9I CCNGG 7 cut(s) 370, 390, 440, 461, 725, 737, 1584
MunI CAATTG 3 cut(s) 304, 843, 1091
Mva1269I GAATGC 3 cut(s) 551, 725, 1717
MvaI CCWGG 2 cut(s) 440, 1584
MvnI CGCG 1 cut(s) 558
MwoI GCNNNNNNNGC 4 cut(s) 80, 461, 1208, 1278
NciI CCSGG 5 cut(s) 370, 390, 461, 725, 737
NdeII GATC 5 cut(s) 295, 300, 495, 958, 1555
NlaIII CATG 5 cut(s) 664, 800, 1441, 1599, 1704
NlaIV GGNNCC 6 cut(s) 278, 373, 525, 699, 741, 1427
NmeAIII GCCGAG 1 cut(s) 674
NsiI ATGCAT 3 cut(s) 666, 943, 1601
NspI RCATGY 2 cut(s) 800, 1599
PcsI WCGNNNNNNNCGW 2 cut(s) 75, 99
PctI GAATGC 3 cut(s) 551, 725, 1717
PfeI GAWTC 1 cut(s) 420
PflFI GACNNNGTC 1 cut(s) 74
PflMI CCANNNNNTGG 1 cut(s) 749
PkrI GCNGC 3 cut(s) 121, 1204, 1421
PleI GAGTC 2 cut(s) 146, 1009
PpsI GAGTC 2 cut(s) 146, 1009
Psp1406I AACGTT 1 cut(s) 93
Psp6I CCWGG 2 cut(s) 438, 1582
PspGI CCWGG 2 cut(s) 438, 1582
PspN4I GGNNCC 6 cut(s) 278, 373, 525, 699, 741, 1427
PspOMI GGGCCC 1 cut(s) 276
PsrI GAACNNNNNNTAC 4 cut(s) 212, 244, 1463, 1495
PsuI RGATCY 1 cut(s) 295
PsyI GACNNNGTC 1 cut(s) 74
RsaI GTAC 4 cut(s) 206, 239, 482, 1481
RsaNI GTAC 4 cut(s) 205, 238, 481, 1480
SaqAI TTAA 6 cut(s) 11, 183, 792, 1188, 1407, 1632
SatI GCNGC 3 cut(s) 120, 1203, 1420
Sau3AI GATC 5 cut(s) 295, 300, 495, 958, 1555
SchI GAGTC 2 cut(s) 147, 1010
ScrFI CCNGG 7 cut(s) 370, 390, 440, 461, 725, 737, 1584
SduI GDGCHC 2 cut(s) 280, 1445
SfaNI GCATC 8 cut(s) 92, 479, 520, 950, 1276, 1370, 1438, 1608
SfcI CTRYAG 1 cut(s) 1683
SinI GGWCC 7 cut(s) 197, 366, 372, 442, 523, 1275, 1580
SmlI CTYRAG 4 cut(s) 317, 860, 1014, 1413
SmoI CTYRAG 4 cut(s) 317, 860, 1014, 1413
Sse9I AATT 8 cut(s) 304, 755, 775, 843, 978, 1044, 1091, 1379
SsiI CCGC 7 cut(s) 254, 375, 436, 487, 549, 556, 1202
SspI AATATT 2 cut(s) 836, 854
StyD4I CCNGG 7 cut(s) 368, 388, 438, 459, 723, 735, 1582
StyI CCWWGG 3 cut(s) 291, 891, 1058
TaaI ACNGT 1 cut(s) 1684
TaiI ACGT 1 cut(s) 96
TaqI TCGA 4 cut(s) 78, 423, 1143, 1284
TasI AATT 8 cut(s) 304, 755, 775, 843, 978, 1044, 1091, 1379
TatI WGTACW 3 cut(s) 204, 237, 1479
TauI GCSGC 1 cut(s) 1205
TfiI GAWTC 1 cut(s) 420
Tru1I TTAA 6 cut(s) 11, 183, 792, 1188, 1407, 1632
Tru9I TTAA 6 cut(s) 11, 183, 792, 1188, 1407, 1632
TscAI CASTG 3 cut(s) 291, 421, 1702
TseI GCWGC 2 cut(s) 119, 1419
TspDTI ATGAA 5 cut(s) 554, 649, 818, 846, 1724
TspRI CASTG 3 cut(s) 291, 421, 1702
Tth111I GACNNNGTC 1 cut(s) 74
Van91I CCANNNNNTGG 1 cut(s) 749
VpaK11BI GGWCC 7 cut(s) 197, 366, 372, 442, 523, 1275, 1580
XapI RAATTY 5 cut(s) 755, 775, 978, 1044, 1379
XceI RCATGY 2 cut(s) 800, 1599
XcmI CCANNNNNNNNNTGG 2 cut(s) 1065, 1298
Zsp2I ATGCAT 3 cut(s) 666, 943, 1601
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.