Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003316

Physical Location & Seq

Genomic Coordinates Reverse (-)

18747509 .. 18749215

Gene Structure 1707 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G45490.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 867 bp

ATGAGTAAGAAATCGACAGAATCTGACGCTGGCAATACTGAGAAGCAATGGTCCCTGGCAGATTTCGAGATCGGGAGACCACTTGGAAAAGGCAAATTTGGCAGAGTCTATCTCGCCCGAGAAGCCAAGAGCAAGTACATAGTGGCGCTGAAAGTCATATTCAAGGAACAGATAGAGAAGTATAAAATTCATCATCAGCTTAGGAGAGAAATGGAGATCCAAACGAGTTTAAGGCACCCAAATATCTTGCGTCTTTTTGGTTGGTTCCATGACAATGAGAGGATTTTCTTGATTCTCGAGTATGCTCATGGTGGTGAGCTCTATGGTGTGCTCAAACAGAATGGTCATCTTACTGAACAACAAGCCGCCACTTACATTGCAAGTCTCAGTCAGGCACTGGCCTATTGTCATGGCAAATGTGTGATTCATAGAGACATCAAACCTGAAAATTTGTTGCTCGATCATGAGGGGAGATTGAAAATTGCTGACTTTGGATGGTCAGTTCAGTCAAGTAACAAGAGGAAAACAATGTGTGGAACCTTGGATTACTTAGCACCTGAGATGGTAGAAAATAGAGATCATGATTATGCAGTTGATAACTGGACCTTAGGCATACTGTGTTACGAGTTTCTCTACGGTAACCCTCCATTCGAAGCCGAGAGTCAAAAAGATACATTCAAGAGAATTCTTAAGATTGATCTGAGTTTTCCTCTTACACCGAATGTTTCAGAAGAAGCCAAAAATCTTATCAGTCAGCTTCTTGTTAAGGATCCCTCCAAACGACTCTCTATTGAGAAGATCATGCAACATCCATGGATTGTCAAGAACGCAGATCCGAAAGGTGTGTGTGCCTCAATTGATATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000228 GO:0000278 GO:0000775 GO:0000779 GO:0000780 GO:0000793 GO:0000794 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005819 GO:0005856 GO:0005874 GO:0005875 GO:0005876 GO:0006325 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0008152 GO:0009987 GO:0010564 GO:0015630 GO:0016043 GO:0016301 GO:0016310 GO:0016569 GO:0016570 GO:0016572 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022402 GO:0031974 GO:0031981 GO:0032133 GO:0032465 GO:0032991 GO:0035173 GO:0035174 GO:0035175 GO:0035404 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043987 GO:0043988 GO:0044022 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0048471 GO:0050789 GO:0050794 GO:0051233 GO:0051276 GO:0051302 GO:0051726 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0098687 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140096 GO:1901564 GO:1902850 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

288

Amino Acids

33.12

Weight (kDa)

8.44

Isoelectric Point (pI)

37.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	22 - 273	2.7e-80	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	23 - 269	1.3e-43	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003316)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45490 AT2G45490
fragaria_vesca	FvH4_4g03900 FvH4_4g03900 FvH4_4g03900 FvH4_4g03900 FvH4_4g03900 FvH4_7g12170 FvH4_7g12170 FvH4_7g12170 FvH4_7g12170
malus_domestica	MD02G1200900.v1.1
prunus_persica	Prupe.2G148200_v2.0.a1 Prupe.2G148200_v2.0.a1
pyrus_communis	pycom02g16420
rosa_chinensis	RchiOBHm_Chr1g0350921 RchiOBHm_Chr4g0393931
rosa_laevigata	RLG00000028441
rosa_multiflora	Rmu_sc0002665.1_g000020 Rmu_sc0014584.1_g000001
rosa_roxburghii	Rroxscaffold_4G00304300 Rroxscaffold_5G00339010
rosa_rugosa	Rorug01G0215300 Rorug03G0370400 Rorug03G0370500
rosa_samantha	Rh1AG230000 Rh1BG199900 Rh1CG214400 Rh1DG227700 Rh4AG049600 Rh4BG046000 Rh4CG053100 Rh4DG046600
rosa_wichuraiana	Rw1G019910 Rw1G019940 Rw4G003930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	234
AciI	CCGC	1 cut(s)	366
AclWI	GGATC	4 cut(s)	211, 764, 777, 827
AcsI	RAATTY	4 cut(s)	95, 186, 448, 684
AfaI	GTAC	1 cut(s)	137
AflII	CTTAAG	1 cut(s)	689
AgsI	TTSAA	3 cut(s)	163, 478, 679
AjnI	CCWGG	1 cut(s)	54
AloI	GAACNNNNNNTCC	2 cut(s)	486, 518
AluBI	AGCT	3 cut(s)	199, 319, 757
AluI	AGCT	3 cut(s)	199, 319, 757
Alw21I	GWGCWC	2 cut(s)	321, 333
Alw26I	GTCTC	3 cut(s)	70, 389, 426
AlwI	GGATC	4 cut(s)	211, 764, 777, 827
AlwNI	CAGNNNCTG	2 cut(s)	23, 397
Ama87I	CYCGRG	2 cut(s)	117, 296
AoxI	GGCC	1 cut(s)	399
ApoI	RAATTY	4 cut(s)	95, 186, 448, 684
AspLEI	GCGC	1 cut(s)	148
AspS9I	GGNCC	2 cut(s)	51, 603
AsuHPI	GGTGA	1 cut(s)	326
AsuII	TTCGAA	1 cut(s)	651
AvaI	CYCGRG	2 cut(s)	117, 296
AvaII	GGWCC	2 cut(s)	51, 603
AxyI	CCTNAGG	1 cut(s)	607
BamHI	GGATCC	1 cut(s)	769
BanI	GGYRCC	1 cut(s)	234
BanII	GRGCYC	1 cut(s)	321
Bbv12I	GWGCWC	2 cut(s)	321, 333
BccI	CCATC	2 cut(s)	489, 556
BciT130I	CCWGG	1 cut(s)	56
BcoDI	GTCTC	3 cut(s)	70, 389, 426
BfoI	RGCGCY	1 cut(s)	149
BfrI	CTTAAG	1 cut(s)	689
BisI	GCNGC	1 cut(s)	366
BlsI	GCNGC	1 cut(s)	367
Bme1390I	CCNGG	1 cut(s)	56
Bme18I	GGWCC	2 cut(s)	51, 603
BmeT110I	CYCGRG	2 cut(s)	117, 296
BmgT120I	GGNCC	2 cut(s)	51, 603
BmiI	GGNNCC	5 cut(s)	53, 236, 266, 538, 771
BmrFI	CCNGG	1 cut(s)	56
BplI	GAGNNNNNCTC	4 cut(s)	96, 128, 694, 726
Bpu10I	CCTNAGC	1 cut(s)	200
Bpu14I	TTCGAA	1 cut(s)	651
BsaI	GGTCTC	1 cut(s)	70
BsaJI	CCNNGG	3 cut(s)	54, 540, 812
Bse1I	ACTGG	2 cut(s)	402, 605
Bse21I	CCTNAGG	1 cut(s)	607
Bse3DI	GCAATG	2 cut(s)	53, 375
BseBI	CCWGG	1 cut(s)	56
BseDI	CCNNGG	3 cut(s)	54, 540, 812
BseGI	GGATG	2 cut(s)	500, 808
BseMI	GCAATG	2 cut(s)	53, 375
BseMII	CTCAG	4 cut(s)	30, 400, 549, 692
BseNI	ACTGG	2 cut(s)	402, 605
BshFI	GGCC	1 cut(s)	401
BshNI	GGYRCC	1 cut(s)	234
BsiHKAI	GWGCWC	2 cut(s)	321, 333
BsiHKCI	CYCGRG	2 cut(s)	117, 296
BslFI	GGGAC	1 cut(s)	37
BsmAI	GTCTC	3 cut(s)	70, 389, 426
BsmFI	GGGAC	1 cut(s)	37
BsnI	GGCC	1 cut(s)	401
Bso31I	GGTCTC	1 cut(s)	70
BsoBI	CYCGRG	2 cut(s)	117, 296
Bsp119I	TTCGAA	1 cut(s)	651
Bsp1286I	GDGCHC	2 cut(s)	321, 333
Bsp143I	GATC	8 cut(s)	69, 216, 460, 577, 697, 769, 798, 832
Bsp19I	CCATGG	1 cut(s)	812
BspACI	CCGC	1 cut(s)	366
BspANI	GGCC	1 cut(s)	401
BspCNI	CTCAG	4 cut(s)	31, 399, 550, 693
BspHI	TCATGA	2 cut(s)	463, 580
BspLI	GGNNCC	5 cut(s)	53, 236, 266, 538, 771
BspPI	GGATC	4 cut(s)	211, 764, 777, 827
BspT104I	TTCGAA	1 cut(s)	651
BspT107I	GGYRCC	1 cut(s)	234
BspTI	CTTAAG	1 cut(s)	689
BspTNI	GGTCTC	1 cut(s)	70
BsrDI	GCAATG	2 cut(s)	53, 375
BsrI	ACTGG	2 cut(s)	402, 605
BssECI	CCNNGG	3 cut(s)	54, 540, 812
BssMI	GATC	8 cut(s)	69, 216, 460, 577, 697, 769, 798, 832
BssT1I	CCWWGG	2 cut(s)	540, 812
Bst2UI	CCWGG	1 cut(s)	56
Bst4CI	ACNGT	2 cut(s)	618, 638
BstAFI	CTTAAG	1 cut(s)	689
BstBI	TTCGAA	1 cut(s)	651
BstC8I	GCNNGC	1 cut(s)	31
BstDEI	CTNAG	7 cut(s)	39, 200, 386, 550, 558, 607, 701
BstDSI	CCRYGG	1 cut(s)	812
BstEII	GGTNACC	1 cut(s)	638
BstF5I	GGATG	2 cut(s)	500, 808
BstH2I	RGCGCY	1 cut(s)	149
BstHHI	GCGC	1 cut(s)	148
BstKTI	GATC	8 cut(s)	72, 219, 463, 580, 700, 772, 801, 835
BstMAI	GTCTC	3 cut(s)	70, 389, 426
BstMBI	GATC	8 cut(s)	69, 216, 460, 577, 697, 769, 798, 832
BstMWI	GCNNNNNNNGC	2 cut(s)	99, 122
BstNI	CCWGG	1 cut(s)	56
BstPI	GGTNACC	1 cut(s)	638
BstSCI	CCNGG	1 cut(s)	54
BstX2I	RGATCY	3 cut(s)	216, 769, 832
BstYI	RGATCY	3 cut(s)	216, 769, 832
Bsu36I	CCTNAGG	1 cut(s)	607
BsuRI	GGCC	1 cut(s)	401
BtgI	CCRYGG	1 cut(s)	812
BtsCI	GGATG	2 cut(s)	500, 808
BtsIMutI	CAGTG	1 cut(s)	395
Cac8I	GCNNGC	1 cut(s)	31
CaiI	CAGNNNCTG	2 cut(s)	23, 397
CciI	TCATGA	2 cut(s)	463, 580
CfoI	GCGC	1 cut(s)	148
Cfr13I	GGNCC	2 cut(s)	51, 603
CseI	GACGC	2 cut(s)	35, 239
Csp6I	GTAC	1 cut(s)	136
CspCI	CAANNNNNGTGG	2 cut(s)	358, 393
CviAII	CATG	7 cut(s)	269, 308, 410, 464, 581, 802, 813
CviJI	RGCY	8 cut(s)	125, 199, 319, 365, 401, 656, 737, 757
CviKI_1	RGCY	8 cut(s)	125, 199, 319, 365, 401, 656, 737, 757
CviQI	GTAC	1 cut(s)	136
DdeI	CTNAG	7 cut(s)	39, 200, 386, 550, 558, 607, 701
DpnI	GATC	8 cut(s)	71, 218, 462, 579, 699, 771, 800, 834
DpnII	GATC	8 cut(s)	69, 216, 460, 577, 697, 769, 798, 832
Ecl136II	GAGCTC	1 cut(s)	319
Eco130I	CCWWGG	2 cut(s)	540, 812
Eco24I	GRGCYC	1 cut(s)	321
Eco31I	GGTCTC	1 cut(s)	70
Eco47I	GGWCC	2 cut(s)	51, 603
Eco53kI	GAGCTC	1 cut(s)	319
Eco81I	CCTNAGG	1 cut(s)	607
Eco88I	CYCGRG	2 cut(s)	117, 296
Eco91I	GGTNACC	1 cut(s)	638
EcoICRI	GAGCTC	1 cut(s)	319
EcoO65I	GGTNACC	1 cut(s)	638
EcoRI	GAATTC	1 cut(s)	684
EcoRII	CCWGG	1 cut(s)	54
EcoT14I	CCWWGG	2 cut(s)	540, 812
EcoT38I	GRGCYC	1 cut(s)	321
ErhI	CCWWGG	2 cut(s)	540, 812
FaeI	CATG	7 cut(s)	272, 311, 413, 467, 584, 805, 816
FaqI	GGGAC	1 cut(s)	37
FatI	CATG	7 cut(s)	268, 307, 409, 463, 580, 801, 812
Fnu4HI	GCNGC	1 cut(s)	366
FokI	GGATG	2 cut(s)	507, 795
FriOI	GRGCYC	1 cut(s)	321
Fsp4HI	GCNGC	1 cut(s)	366
GlaI	GCGC	1 cut(s)	147
GluI	GCNGC	1 cut(s)	366
HaeII	RGCGCY	1 cut(s)	149
HaeIII	GGCC	1 cut(s)	401
HgaI	GACGC	2 cut(s)	35, 239
HhaI	GCGC	1 cut(s)	148
Hin1II	CATG	7 cut(s)	272, 311, 413, 467, 584, 805, 816
Hin6I	GCGC	1 cut(s)	146
HinP1I	GCGC	1 cut(s)	146
HinfI	GANTC	6 cut(s)	20, 105, 292, 424, 661, 783
HphI	GGTGA	1 cut(s)	326
Hpy188I	TCNGA	4 cut(s)	25, 702, 730, 837
Hpy188III	TCNNGA	8 cut(s)	67, 73, 289, 296, 464, 581, 679, 823
HpyCH4III	ACNGT	2 cut(s)	618, 638
HpyCH4V	TGCA	3 cut(s)	380, 590, 805
HpyF10VI	GCNNNNNNNGC	2 cut(s)	99, 122
HpyF3I	CTNAG	7 cut(s)	39, 200, 386, 550, 558, 607, 701
Hsp92II	CATG	7 cut(s)	272, 311, 413, 467, 584, 805, 816
HspAI	GCGC	1 cut(s)	146
Kzo9I	GATC	8 cut(s)	69, 216, 460, 577, 697, 769, 798, 832
LpnPI	CCDG	8 cut(s)	15, 41, 68, 377, 383, 456, 570, 586
MaeIII	GTNAC	3 cut(s)	512, 620, 638
MalI	GATC	8 cut(s)	71, 218, 462, 579, 699, 771, 800, 834
MboI	GATC	8 cut(s)	69, 216, 460, 577, 697, 769, 798, 832
MboII	GAAGA	2 cut(s)	743, 808
MfeI	CAATTG	1 cut(s)	855
MflI	RGATCY	3 cut(s)	216, 769, 832
MhlI	GDGCHC	2 cut(s)	321, 333
MluCI	AATT	6 cut(s)	95, 186, 448, 480, 684, 855
MlyI	GAGTC	3 cut(s)	114, 670, 777
MnlI	CCTC	7 cut(s)	273, 460, 513, 654, 720, 784, 862
MseI	TTAA	3 cut(s)	230, 690, 765
MslI	CAYNNNNRTG	3 cut(s)	273, 312, 585
MspCI	CTTAAG	1 cut(s)	689
MspR9I	CCNGG	1 cut(s)	56
MunI	CAATTG	1 cut(s)	855
MvaI	CCWGG	1 cut(s)	56
MwoI	GCNNNNNNNGC	2 cut(s)	99, 122
NcoI	CCATGG	1 cut(s)	812
NdeII	GATC	8 cut(s)	69, 216, 460, 577, 697, 769, 798, 832
NlaIII	CATG	7 cut(s)	272, 311, 413, 467, 584, 805, 816
NlaIV	GGNNCC	5 cut(s)	53, 236, 266, 538, 771
NmeAIII	GCCGAG	1 cut(s)	682
NspV	TTCGAA	1 cut(s)	651
PaeR7I	CTCGAG	1 cut(s)	296
PagI	TCATGA	2 cut(s)	463, 580
PfeI	GAWTC	3 cut(s)	20, 292, 424
PkrI	GCNGC	1 cut(s)	367
PleI	GAGTC	3 cut(s)	113, 669, 777
PpsI	GAGTC	3 cut(s)	113, 669, 777
Psp124BI	GAGCTC	1 cut(s)	321
Psp6I	CCWGG	1 cut(s)	54
PspEI	GGTNACC	1 cut(s)	638
PspGI	CCWGG	1 cut(s)	54
PspN4I	GGNNCC	5 cut(s)	53, 236, 266, 538, 771
PspPI	GGNCC	2 cut(s)	51, 603
PstNI	CAGNNNCTG	2 cut(s)	23, 397
PsuI	RGATCY	3 cut(s)	216, 769, 832
RsaI	GTAC	1 cut(s)	137
RsaNI	GTAC	1 cut(s)	136
RseI	CAYNNNNRTG	3 cut(s)	273, 312, 585
SacI	GAGCTC	1 cut(s)	321
SaqAI	TTAA	3 cut(s)	230, 690, 765
SatI	GCNGC	1 cut(s)	366
Sau3AI	GATC	8 cut(s)	69, 216, 460, 577, 697, 769, 798, 832
Sau96I	GGNCC	2 cut(s)	51, 603
SchI	GAGTC	3 cut(s)	114, 670, 777
ScrFI	CCNGG	1 cut(s)	56
SduI	GDGCHC	2 cut(s)	321, 333
SetI	ASST	8 cut(s)	201, 321, 445, 542, 559, 608, 759, 844
Sfr274I	CTCGAG	1 cut(s)	296
SfuI	TTCGAA	1 cut(s)	651
SinI	GGWCC	2 cut(s)	51, 603
SlaI	CTCGAG	1 cut(s)	296
SmiMI	CAYNNNNRTG	3 cut(s)	273, 312, 585
SmlI	CTYRAG	2 cut(s)	296, 689
SmoI	CTYRAG	2 cut(s)	296, 689
Sse9I	AATT	6 cut(s)	95, 186, 448, 480, 684, 855
SsiI	CCGC	1 cut(s)	366
SstI	GAGCTC	1 cut(s)	321
StyD4I	CCNGG	1 cut(s)	54
StyI	CCWWGG	2 cut(s)	540, 812
TaaI	ACNGT	2 cut(s)	618, 638
TaqI	TCGA	5 cut(s)	14, 66, 297, 459, 651
TasI	AATT	6 cut(s)	95, 186, 448, 480, 684, 855
TatI	WGTACW	1 cut(s)	135
TauI	GCSGC	1 cut(s)	368
TfiI	GAWTC	3 cut(s)	20, 292, 424
Tru1I	TTAA	3 cut(s)	230, 690, 765
Tru9I	TTAA	3 cut(s)	230, 690, 765
TscAI	CASTG	1 cut(s)	402
TspDTI	ATGAA	2 cut(s)	179, 416
TspRI	CASTG	1 cut(s)	402
Vha464I	CTTAAG	1 cut(s)	689
VpaK11BI	GGWCC	2 cut(s)	51, 603
XapI	RAATTY	4 cut(s)	95, 186, 448, 684
XhoI	CTCGAG	1 cut(s)	296

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.