Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0003316

Physical Location & Seq

Genomic Coordinates Reverse (-)

20406775 .. 20409510

Gene Structure 2736 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G148200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 846 bp

ATGGAAACTCAGAAAGGGCAAGAAAGCCGAAGGAGAGAATGGTCCTTGCGAGACTTCGAGATCGGAAAACCCCTGGGCAAAGGGAAATTCGGGAGAGTCTACGTTGCCAGAGAAGCCAAGAGCAAGTATATAGTGGCATTGAAGGTGATATTCAAGGAGCAAATCGAGAAGTATAAGATTCAACATCAGCTGAGGAGAGAGATGGAGATTCAGACCAGTCTCAGGCACCCCAACATTCTTCGCCTCTACGGTTGGTTCCACGACGACGAACGCATCTTCTTGATCCTCGAGTATGCCCATGGCGGTGAGCTTTATGGGCTTCTCAGGAAAACTAATTACCTCTCTGAGGAACAAGCCGCCACTTACATTCTGAGCTTGACGCAAGCTTTGGCGTATTGTCACGAGAAGAATGTCATTCATAGGGATATAAAGCCTGAAAATTTGCTTCTGGATCATGAGGGTCGACTGAAAATTGCAGACTTTGGATGGTCCGTACAGTCCAGAAGCAAGAGACAGACCATGTGTGGAACTTTAGATTATTTAGCACCAGAAATGGTGGAGAACAGACCTCATGATTATGCAGTTGACAACTGGACTCTGGGCATTCTTTGCTATGAGTTCCTCTATGGTATTCCTCCCTTTGAGGCAGAAAGTCAAACGGATACGTTCAAAAGGATAATAAAGGTTGACCTAAACTTCCCTTCTGCACCTCAAACTTCTGCAGAAGCTAAACATCTCATTACCCGGCTTCTTGTCAAAGACTCCTCAAAAAGGCTTTCTCTTCAGAGGATCATGGAACACCCTTGGATAGTCAAGAACGCCGATCCATCGGGTATCTGCAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000228 GO:0000278 GO:0000775 GO:0000779 GO:0000780 GO:0000793 GO:0000794 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005819 GO:0005856 GO:0005874 GO:0005875 GO:0005876 GO:0006325 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007052 GO:0008150 GO:0008152 GO:0009987 GO:0010564 GO:0015630 GO:0016043 GO:0016301 GO:0016310 GO:0016569 GO:0016570 GO:0016572 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022402 GO:0031974 GO:0031981 GO:0032133 GO:0032465 GO:0032991 GO:0035173 GO:0035174 GO:0035175 GO:0035404 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043987 GO:0043988 GO:0044022 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0048471 GO:0050789 GO:0050794 GO:0051233 GO:0051276 GO:0051302 GO:0051726 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0098687 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140096 GO:1901564 GO:1902850 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

282

Amino Acids

32.9

Weight (kDa)

8.98

Isoelectric Point (pI)

40.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003316)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45490 AT2G45490
fragaria_vesca	FvH4_4g03900 FvH4_4g03900 FvH4_4g03900 FvH4_4g03900 FvH4_4g03900 FvH4_7g12170 FvH4_7g12170 FvH4_7g12170 FvH4_7g12170
malus_domestica	MD02G1200900.v1.1
prunus_persica	Prupe.2G148200_v2.0.a1 Prupe.2G148200_v2.0.a1
pyrus_communis	pycom02g16420
rosa_chinensis	RchiOBHm_Chr1g0350921 RchiOBHm_Chr4g0393931
rosa_laevigata	RLG00000028441
rosa_multiflora	Rmu_sc0002665.1_g000020 Rmu_sc0014584.1_g000001
rosa_roxburghii	Rroxscaffold_4G00304300 Rroxscaffold_5G00339010
rosa_rugosa	Rorug01G0215300 Rorug03G0370400 Rorug03G0370500
rosa_samantha	Rh1AG230000 Rh1BG199900 Rh1CG214400 Rh1DG227700 Rh4AG049600 Rh4BG046000 Rh4CG053100 Rh4DG046600
rosa_wichuraiana	Rw1G019910 Rw1G019940 Rw4G003930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	225
AccI	GTMKAC	2 cut(s)	99, 463
AciI	CCGC	2 cut(s)	303, 357
AclWI	GGATC	4 cut(s)	277, 459, 797, 818
AcsI	RAATTY	2 cut(s)	86, 439
AcuI	CTGAAG	1 cut(s)	767
AfaI	GTAC	1 cut(s)	495
AfiI	CCNNNNNNNGG	3 cut(s)	222, 346, 771
AgsI	TTSAA	4 cut(s)	142, 154, 182, 670
AjnI	CCWGG	1 cut(s)	72
AluBI	AGCT	5 cut(s)	190, 310, 375, 386, 728
AluI	AGCT	5 cut(s)	190, 310, 375, 386, 728
Alw26I	GTCTC	3 cut(s)	45, 224, 505
AlwI	GGATC	4 cut(s)	277, 459, 797, 818
Ama87I	CYCGRG	1 cut(s)	287
ApoI	RAATTY	2 cut(s)	86, 439
ArsI	GACNNNNNNTTYG	2 cut(s)	370, 402
AspS9I	GGNCC	2 cut(s)	42, 489
AsuC2I	CCSGG	1 cut(s)	745
AsuHPI	GGTGA	2 cut(s)	157, 317
AvaI	CYCGRG	1 cut(s)	287
AvaII	GGWCC	2 cut(s)	42, 489
BanI	GGYRCC	1 cut(s)	225
BauI	CACGAG	1 cut(s)	401
BbvCI	CCTCAGC	1 cut(s)	191
BccI	CCATC	3 cut(s)	196, 480, 835
BciT130I	CCWGG	1 cut(s)	74
BciVI	GTATCC	1 cut(s)	655
BcnI	CCSGG	1 cut(s)	745
BcoDI	GTCTC	3 cut(s)	45, 224, 505
BfmI	CTRYAG	1 cut(s)	720
BfuI	GTATCC	1 cut(s)	655
BisI	GCNGC	1 cut(s)	357
BlsI	GCNGC	1 cut(s)	358
Bme1390I	CCNGG	2 cut(s)	74, 745
Bme18I	GGWCC	2 cut(s)	42, 489
BmeT110I	CYCGRG	1 cut(s)	287
BmgT120I	GGNCC	2 cut(s)	42, 489
BmiI	GGNNCC	2 cut(s)	227, 257
BmrFI	CCNGG	2 cut(s)	74, 745
BmsI	GCATC	1 cut(s)	282
Bpu10I	CCTNAGC	1 cut(s)	191
BpuMI	CCSGG	1 cut(s)	745
BsaJI	CCNNGG	4 cut(s)	72, 73, 298, 803
Bsc4I	CCNNNNNNNGG	3 cut(s)	222, 346, 771
Bse1I	ACTGG	2 cut(s)	216, 596
BseBI	CCWGG	1 cut(s)	74
BseDI	CCNNGG	4 cut(s)	72, 73, 298, 803
BseGI	GGATG	1 cut(s)	491
BseLI	CCNNNNNNNGG	3 cut(s)	222, 346, 771
BseMII	CTCAG	6 cut(s)	23, 182, 235, 336, 337, 362
BseNI	ACTGG	2 cut(s)	216, 596
BseRI	GAGGAG	2 cut(s)	208, 754
BsgI	GTGCAG	1 cut(s)	690
BshNI	GGYRCC	1 cut(s)	225
BsiHKCI	CYCGRG	1 cut(s)	287
BsiSI	CCGG	1 cut(s)	745
BslI	CCNNNNNNNGG	3 cut(s)	222, 346, 771
BsmAI	GTCTC	3 cut(s)	45, 224, 505
BsmI	GAATGC	1 cut(s)	603
BsoBI	CYCGRG	1 cut(s)	287
Bsp143I	GATC	5 cut(s)	60, 282, 451, 789, 823
Bsp19I	CCATGG	1 cut(s)	298
BspACI	CCGC	2 cut(s)	303, 357
BspCNI	CTCAG	6 cut(s)	22, 183, 234, 336, 337, 363
BspHI	TCATGA	2 cut(s)	454, 571
BspLI	GGNNCC	2 cut(s)	227, 257
BspMAI	CTGCAG	1 cut(s)	724
BspPI	GGATC	4 cut(s)	277, 459, 797, 818
BspT107I	GGYRCC	1 cut(s)	225
BsrI	ACTGG	2 cut(s)	216, 596
BssECI	CCNNGG	4 cut(s)	72, 73, 298, 803
BssMI	GATC	5 cut(s)	60, 282, 451, 789, 823
BssSI	CACGAG	1 cut(s)	401
BssT1I	CCWWGG	2 cut(s)	298, 803
Bst2BI	CACGAG	1 cut(s)	401
Bst2UI	CCWGG	1 cut(s)	74
Bst4CI	ACNGT	2 cut(s)	251, 498
Bst6I	CTCTTC	1 cut(s)	786
BstAPI	GCANNNNNTGC	1 cut(s)	609
BstC8I	GCNNGC	1 cut(s)	384
BstDEI	CTNAG	6 cut(s)	9, 191, 221, 323, 345, 371
BstDSI	CCRYGG	1 cut(s)	298
BstENI	CCTNNNNNAGG	2 cut(s)	344, 769
BstF5I	GGATG	1 cut(s)	491
BstKTI	GATC	5 cut(s)	63, 285, 454, 792, 826
BstMAI	GTCTC	3 cut(s)	45, 224, 505
BstMBI	GATC	5 cut(s)	60, 282, 451, 789, 823
BstMWI	GCNNNNNNNGC	3 cut(s)	113, 316, 609
BstNI	CCWGG	1 cut(s)	74
BstSCI	CCNGG	2 cut(s)	72, 743
BstSFI	CTRYAG	1 cut(s)	720
BsuI	GTATCC	1 cut(s)	655
BtgI	CCRYGG	1 cut(s)	298
BtsCI	GGATG	1 cut(s)	491
Cac8I	GCNNGC	1 cut(s)	384
CciI	TCATGA	2 cut(s)	454, 571
Cfr13I	GGNCC	2 cut(s)	42, 489
CseI	GACGC	1 cut(s)	388
Csp6I	GTAC	1 cut(s)	494
CviAII	CATG	5 cut(s)	299, 455, 520, 572, 793
CviQI	GTAC	1 cut(s)	494
DdeI	CTNAG	6 cut(s)	9, 191, 221, 323, 345, 371
DpnI	GATC	5 cut(s)	62, 284, 453, 791, 825
DpnII	GATC	5 cut(s)	60, 282, 451, 789, 823
Eam1104I	CTCTTC	1 cut(s)	786
EarI	CTCTTC	1 cut(s)	786
Eco130I	CCWWGG	2 cut(s)	298, 803
Eco47I	GGWCC	2 cut(s)	42, 489
Eco57I	CTGAAG	1 cut(s)	767
Eco88I	CYCGRG	1 cut(s)	287
EcoNI	CCTNNNNNAGG	2 cut(s)	344, 769
EcoRII	CCWGG	1 cut(s)	72
EcoT14I	CCWWGG	2 cut(s)	298, 803
ErhI	CCWWGG	2 cut(s)	298, 803
FaeI	CATG	5 cut(s)	302, 458, 523, 575, 796
FatI	CATG	5 cut(s)	298, 454, 519, 571, 792
FblI	GTMKAC	2 cut(s)	99, 463
Fnu4HI	GCNGC	1 cut(s)	357
FokI	GGATG	1 cut(s)	498
Fsp4HI	GCNGC	1 cut(s)	357
GluI	GCNGC	1 cut(s)	357
HapII	CCGG	1 cut(s)	745
HgaI	GACGC	1 cut(s)	388
Hin1II	CATG	5 cut(s)	302, 458, 523, 575, 796
HincII	GTYRAC	3 cut(s)	464, 586, 688
HindII	GTYRAC	3 cut(s)	464, 586, 688
HindIII	AAGCTT	1 cut(s)	384
HinfI	GANTC	5 cut(s)	96, 178, 208, 595, 761
HpaII	CCGG	1 cut(s)	745
HphI	GGTGA	2 cut(s)	157, 317
Hpy166II	GTNNAC	4 cut(s)	100, 464, 586, 688
Hpy188I	TCNGA	6 cut(s)	12, 65, 213, 346, 372, 786
Hpy8I	GTNNAC	4 cut(s)	100, 464, 586, 688
Hpy99I	CGWCG	2 cut(s)	266, 269
HpyAV	CCTTC	3 cut(s)	24, 136, 711
HpyCH4III	ACNGT	2 cut(s)	251, 498
HpyCH4IV	ACGT	2 cut(s)	102, 665
HpyCH4V	TGCA	5 cut(s)	476, 581, 707, 722, 840
HpyF10VI	GCNNNNNNNGC	3 cut(s)	113, 316, 609
HpyF3I	CTNAG	6 cut(s)	9, 191, 221, 323, 345, 371
HpySE526I	ACGT	2 cut(s)	102, 665
Hsp92II	CATG	5 cut(s)	302, 458, 523, 575, 796
Kzo9I	GATC	5 cut(s)	60, 282, 451, 789, 823
LmnI	GCTCC	1 cut(s)	157
LweI	GCATC	1 cut(s)	282
MaeII	ACGT	2 cut(s)	102, 665
MaeIII	GTNAC	1 cut(s)	398
MalI	GATC	5 cut(s)	62, 284, 453, 791, 825
MboI	GATC	5 cut(s)	60, 282, 451, 789, 823
MboII	GAAGA	4 cut(s)	230, 268, 418, 773
MluCI	AATT	4 cut(s)	86, 334, 439, 471
MlyI	GAGTC	3 cut(s)	105, 589, 755
MslI	CAYNNNNRTG	2 cut(s)	303, 576
MspA1I	CMGCKG	1 cut(s)	190
MspI	CCGG	1 cut(s)	745
MspR9I	CCNGG	2 cut(s)	74, 745
Mva1269I	GAATGC	1 cut(s)	603
MvaI	CCWGG	1 cut(s)	74
MwoI	GCNNNNNNNGC	3 cut(s)	113, 316, 609
NciI	CCSGG	1 cut(s)	745
NcoI	CCATGG	1 cut(s)	298
NdeII	GATC	5 cut(s)	60, 282, 451, 789, 823
NlaIII	CATG	5 cut(s)	302, 458, 523, 575, 796
NlaIV	GGNNCC	2 cut(s)	227, 257
NmuCI	GTSAC	1 cut(s)	398
PaeR7I	CTCGAG	1 cut(s)	287
PagI	TCATGA	2 cut(s)	454, 571
PasI	CCCWGGG	1 cut(s)	73
PctI	GAATGC	1 cut(s)	603
PfeI	GAWTC	2 cut(s)	178, 208
PkrI	GCNGC	1 cut(s)	358
PleI	GAGTC	3 cut(s)	104, 589, 755
PpsI	GAGTC	3 cut(s)	104, 589, 755
Psp6I	CCWGG	1 cut(s)	72
PspGI	CCWGG	1 cut(s)	72
PspN4I	GGNNCC	2 cut(s)	227, 257
PspPI	GGNCC	2 cut(s)	42, 489
PspXI	VCTCGAGB	1 cut(s)	287
PstI	CTGCAG	1 cut(s)	724
PvuII	CAGCTG	1 cut(s)	190
RsaI	GTAC	1 cut(s)	495
RsaNI	GTAC	1 cut(s)	494
RseI	CAYNNNNRTG	2 cut(s)	303, 576
SalI	GTCGAC	1 cut(s)	462
SatI	GCNGC	1 cut(s)	357
Sau3AI	GATC	5 cut(s)	60, 282, 451, 789, 823
Sau96I	GGNCC	2 cut(s)	42, 489
SchI	GAGTC	3 cut(s)	105, 589, 755
ScrFI	CCNGG	2 cut(s)	74, 745
SfaNI	GCATC	1 cut(s)	282
SfcI	CTRYAG	1 cut(s)	720
Sfr274I	CTCGAG	1 cut(s)	287
SinI	GGWCC	2 cut(s)	42, 489
SlaI	CTCGAG	1 cut(s)	287
SmiMI	CAYNNNNRTG	2 cut(s)	303, 576
SmlI	CTYRAG	1 cut(s)	287
SmoI	CTYRAG	1 cut(s)	287
Sse9I	AATT	4 cut(s)	86, 334, 439, 471
SsiI	CCGC	2 cut(s)	303, 357
StyD4I	CCNGG	2 cut(s)	72, 743
StyI	CCWWGG	2 cut(s)	298, 803
TaaI	ACNGT	2 cut(s)	251, 498
TaiI	ACGT	2 cut(s)	105, 668
TaqI	TCGA	4 cut(s)	57, 165, 288, 463
TasI	AATT	4 cut(s)	86, 334, 439, 471
TauI	GCSGC	1 cut(s)	359
TfiI	GAWTC	2 cut(s)	178, 208
TseFI	GTSAC	1 cut(s)	398
Tsp45I	GTSAC	1 cut(s)	398
TspDTI	ATGAA	1 cut(s)	407
TspGWI	ACGGA	2 cut(s)	481, 674
VpaK11BI	GGWCC	2 cut(s)	42, 489
XagI	CCTNNNNNAGG	2 cut(s)	344, 769
XapI	RAATTY	2 cut(s)	86, 439
XhoI	CTCGAG	1 cut(s)	287
XmiI	GTMKAC	2 cut(s)	99, 463

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.