Rh4BG046000
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Reverse (-)
8348315 .. 8350562
2248 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG046000.1

Sequence Viewer

Length: 966 bp
ATGAAAATTCAAATTTCTGCAGATAAAAATCAAACACTCGTGGCTTCTCAGATTTCAAAATCCAATCTTTCCCTTCTCTCAGTTTCTCTGGTTTTTTTCAAATCCCACCCAGAAATCCATCTCATGGCGACGAAATCCGATTCCCCAAAGAGGGAGTGGTCCCTGAACGACTTCGAGATCGGAAAGCCTCTCGGCAAAGGCAAATTCGGGCGGGTCTACGTGGCCCGAGAAGTCAAGAGCAAGTACGTGGTGGCGTTGAAGGTGTTGTTCAAGAAGCAGATAAAGAAGTACAAGATTCACCACCAGCTGAAGAGAGAGATGGAGATCCAGACCAGTCTCAGACACCCCAACATTCTTCGCCTCTACGGTTGGTTCCACGACGACGAACGCATCGTCTTGATCCTCGAGTACGCCCACGGCGGCGAGCTGTATGGGCTGCTCAGGGAGAACACTCACCTCTCTGAGAAACAGACCGCCACGTATATACTGAGCCTGGCGCAGGCTTTGGCTTATTGTCACGAGAAGCATGTGATTCATAGGGATATCAAGCCGGAAAATTTGTTGCTTGATCATGAGGGTCGACTGAAAATTGCAGACTTTGGATGGTCTGTACAGTCAAGCAGCAAGAGACGAACAATGTGTGGAACGTTAGATTATTTAGCACCAGAAATGGTGGAGAACAGAGCTCATGATTATGCAGTGGATAACTGGACTTTGGGAATTCTCTGCTATGAGTTTCTTTATGGCACTCCTCCATTTGAGGCTGAAAGTCAAAGAGATACTTTCAAAAGGATTACGAACATTGACCTGAGCTTTCCTTCTAGCCCTCAAGTTTCTGCAGAATCTAAACATCTCATTACCCAGCTTCTCGTGAAGGACTCCTCTAAGAGGCTTTCTCTTCAGAAGATCATGGAACACCCTTGGATAATGAAGAATGCAGATCCTTCCGGTATCTGCAATAACTAG

Protein Analysis

321

Amino Acids

36.99

Weight (kDa)

9.19

Isoelectric Point (pI)

35.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 58 - 309 2.6e-76 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 59 - 305 5.2e-45 Protein tyrosine and serine/threonine kinase
Kinase-like PF14531 149 - 253 1e-06 Kinase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 124
AccI GTMKAC 2 cut(s) 216, 580
AciI CCGC 3 cut(s) 211, 420, 474
AclI AACGTT 1 cut(s) 647
AclWI GGATC 3 cut(s) 319, 394, 935
AcsI RAATTY 5 cut(s) 6, 12, 203, 556, 720
AcuI CTGAAG 2 cut(s) 329, 884
AfaI GTAC 4 cut(s) 245, 290, 410, 612
AfiI CCNNNNNNNGG 5 cut(s) 124, 150, 151, 499, 888
AgsI TTSAA 6 cut(s) 11, 57, 100, 259, 271, 787
AjnI CCWGG 1 cut(s) 492
AluBI AGCT 5 cut(s) 307, 427, 686, 813, 865
AluI AGCT 5 cut(s) 307, 427, 686, 813, 865
Alw21I GWGCWC 1 cut(s) 688
Alw26I GTCTC 2 cut(s) 341, 622
AlwI GGATC 3 cut(s) 319, 394, 935
Ama87I CYCGRG 2 cut(s) 225, 404
AoxI GGCC 1 cut(s) 222
ApeKI GCWGC 2 cut(s) 436, 621
ApoI RAATTY 5 cut(s) 6, 12, 203, 556, 720
ArsI GACNNNNNNTTYG 2 cut(s) 378, 410
Asp700I GAANNNNTTC 1 cut(s) 170
AspLEI GCGC 1 cut(s) 499
AspS9I GGNCC 2 cut(s) 159, 223
AsuHPI GGTGA 2 cut(s) 290, 446
AvaI CYCGRG 2 cut(s) 225, 404
AvaII GGWCC 1 cut(s) 159
BanII GRGCYC 1 cut(s) 688
BauI CACGAG 3 cut(s) 38, 518, 869
Bbv12I GWGCWC 1 cut(s) 688
BbvI GCAGC 2 cut(s) 423, 633
BccI CCATC 3 cut(s) 126, 313, 597
BceAI ACGGC 1 cut(s) 433
BciT130I CCWGG 1 cut(s) 494
BclI TGATCA 1 cut(s) 568
BcoDI GTCTC 2 cut(s) 341, 622
BfaI CTAG 2 cut(s) 822, 964
BfmI CTRYAG 2 cut(s) 18, 837
BisI GCNGC 3 cut(s) 421, 437, 622
BlsI GCNGC 3 cut(s) 422, 438, 623
Bme1390I CCNGG 1 cut(s) 494
Bme18I GGWCC 1 cut(s) 159
BmeT110I CYCGRG 2 cut(s) 225, 404
BmgT120I GGNCC 2 cut(s) 159, 223
BmiI GGNNCC 2 cut(s) 161, 374
BmrFI CCNGG 1 cut(s) 494
BmsI GCATC 1 cut(s) 399
BplI GAGNNNNNCTC 2 cut(s) 880, 912
Bpu10I CCTNAGC 2 cut(s) 440, 809
BpuEI CTTGAG 1 cut(s) 813
BsaAI YACGTR 3 cut(s) 220, 247, 480
BsaBI GATNNNNATC 2 cut(s) 27, 323
BsaJI CCNNGG 2 cut(s) 415, 920
BsaWI WCCGGW 1 cut(s) 947
Bsc4I CCNNNNNNNGG 5 cut(s) 124, 150, 151, 499, 888
Bse1I ACTGG 2 cut(s) 333, 713
Bse8I GATNNNNATC 2 cut(s) 27, 323
BseBI CCWGG 1 cut(s) 494
BseDI CCNNGG 2 cut(s) 415, 920
BseGI GGATG 1 cut(s) 608
BseJI GATNNNNATC 2 cut(s) 27, 323
BseLI CCNNNNNNNGG 5 cut(s) 124, 150, 151, 499, 888
BseMII CTCAG 7 cut(s) 62, 93, 352, 453, 454, 479, 800
BseNI ACTGG 2 cut(s) 333, 713
BseRI GAGGAG 2 cut(s) 741, 871
BseXI GCAGC 2 cut(s) 423, 633
BseYI CCCAGC 1 cut(s) 861
BshFI GGCC 1 cut(s) 224
BsiHKAI GWGCWC 1 cut(s) 688
BsiHKCI CYCGRG 2 cut(s) 225, 404
BsiSI CCGG 2 cut(s) 551, 948
BslFI GGGAC 1 cut(s) 145
BslI CCNNNNNNNGG 5 cut(s) 124, 150, 151, 499, 888
BsmAI GTCTC 2 cut(s) 341, 622
BsmBI CGTCTC 1 cut(s) 622
BsmFI GGGAC 1 cut(s) 145
BsmI GAATGC 1 cut(s) 940
BsnI GGCC 1 cut(s) 224
BsoBI CYCGRG 2 cut(s) 225, 404
Bsp1286I GDGCHC 1 cut(s) 688
Bsp1407I TGTACA 1 cut(s) 610
Bsp143I GATC 6 cut(s) 177, 324, 399, 568, 906, 940
BspACI CCGC 3 cut(s) 211, 420, 474
BspANI GGCC 1 cut(s) 224
BspCNI CTCAG 7 cut(s) 61, 92, 351, 453, 454, 480, 801
BspHI TCATGA 2 cut(s) 571, 688
BspLI GGNNCC 2 cut(s) 161, 374
BspMAI CTGCAG 2 cut(s) 22, 841
BspPI GGATC 3 cut(s) 319, 394, 935
BsrGI TGTACA 1 cut(s) 610
BsrI ACTGG 2 cut(s) 333, 713
BssECI CCNNGG 2 cut(s) 415, 920
BssMI GATC 6 cut(s) 177, 324, 399, 568, 906, 940
BssSI CACGAG 3 cut(s) 38, 518, 869
BssT1I CCWWGG 1 cut(s) 920
Bst2BI CACGAG 3 cut(s) 38, 518, 869
Bst2UI CCWGG 1 cut(s) 494
Bst4CI ACNGT 2 cut(s) 368, 615
Bst6I CTCTTC 2 cut(s) 305, 903
BstAUI TGTACA 1 cut(s) 610
BstBAI YACGTR 3 cut(s) 220, 247, 480
BstC8I GCNNGC 2 cut(s) 425, 501
BstDEI CTNAG 8 cut(s) 48, 79, 338, 440, 462, 488, 809, 885
BstDSI CCRYGG 1 cut(s) 415
BstENI CCTNNNNNAGG 2 cut(s) 497, 886
BstF5I GGATG 1 cut(s) 608
BstHHI GCGC 1 cut(s) 499
BstKTI GATC 6 cut(s) 180, 327, 402, 571, 909, 943
BstMAI GTCTC 2 cut(s) 341, 622
BstMBI GATC 6 cut(s) 177, 324, 399, 568, 906, 940
BstMWI GCNNNNNNNGC 1 cut(s) 433
BstNI CCWGG 1 cut(s) 494
BstNSI RCATGY 1 cut(s) 530
BstSCI CCNGG 1 cut(s) 492
BstSFI CTRYAG 2 cut(s) 18, 837
BstV1I GCAGC 2 cut(s) 423, 633
BstX2I RGATCY 2 cut(s) 324, 940
BstYI RGATCY 2 cut(s) 324, 940
BsuRI GGCC 1 cut(s) 224
BtgI CCRYGG 1 cut(s) 415
BtsCI GGATG 1 cut(s) 608
BtsI GCAGTG 1 cut(s) 705
BtsIMutI CAGTG 1 cut(s) 705
Cac8I GCNNGC 2 cut(s) 425, 501
CciI TCATGA 2 cut(s) 571, 688
CfoI GCGC 1 cut(s) 499
Cfr13I GGNCC 2 cut(s) 159, 223
Csp6I GTAC 4 cut(s) 244, 289, 409, 611
CviAII CATG 5 cut(s) 124, 527, 572, 689, 910
CviQI GTAC 4 cut(s) 244, 289, 409, 611
DdeI CTNAG 8 cut(s) 48, 79, 338, 440, 462, 488, 809, 885
DpnI GATC 6 cut(s) 179, 326, 401, 570, 908, 942
DpnII GATC 6 cut(s) 177, 324, 399, 568, 906, 940
Eam1104I CTCTTC 2 cut(s) 305, 903
EarI CTCTTC 2 cut(s) 305, 903
Ecl136II GAGCTC 1 cut(s) 686
Eco130I CCWWGG 1 cut(s) 920
Eco24I GRGCYC 1 cut(s) 688
Eco32I GATATC 1 cut(s) 544
Eco47I GGWCC 1 cut(s) 159
Eco53kI GAGCTC 1 cut(s) 686
Eco57I CTGAAG 2 cut(s) 329, 884
Eco88I CYCGRG 2 cut(s) 225, 404
EcoICRI GAGCTC 1 cut(s) 686
EcoNI CCTNNNNNAGG 2 cut(s) 497, 886
EcoRI GAATTC 1 cut(s) 720
EcoRII CCWGG 1 cut(s) 492
EcoRV GATATC 1 cut(s) 544
EcoT14I CCWWGG 1 cut(s) 920
EcoT38I GRGCYC 1 cut(s) 688
ErhI CCWWGG 1 cut(s) 920
Esp3I CGTCTC 1 cut(s) 622
FaeI CATG 5 cut(s) 127, 530, 575, 692, 913
FalI AAGNNNNNCTT 2 cut(s) 766, 798
FaqI GGGAC 1 cut(s) 145
FatI CATG 5 cut(s) 123, 526, 571, 688, 909
FauI CCCGC 1 cut(s) 204
FbaI TGATCA 1 cut(s) 568
FblI GTMKAC 2 cut(s) 216, 580
Fnu4HI GCNGC 3 cut(s) 421, 437, 622
FokI GGATG 1 cut(s) 615
FriOI GRGCYC 1 cut(s) 688
Fsp4HI GCNGC 3 cut(s) 421, 437, 622
FspBI CTAG 2 cut(s) 822, 964
GlaI GCGC 1 cut(s) 498
GluI GCNGC 3 cut(s) 421, 437, 622
GsaI CCCAGC 1 cut(s) 865
HaeIII GGCC 1 cut(s) 224
HapII CCGG 2 cut(s) 551, 948
HhaI GCGC 1 cut(s) 499
Hin1II CATG 5 cut(s) 127, 530, 575, 692, 913
Hin6I GCGC 1 cut(s) 497
HinP1I GCGC 1 cut(s) 497
HincII GTYRAC 1 cut(s) 581
HindII GTYRAC 1 cut(s) 581
HinfI GANTC 5 cut(s) 140, 295, 532, 842, 878
HpaII CCGG 2 cut(s) 551, 948
HphI GGTGA 2 cut(s) 290, 446
Hpy166II GTNNAC 2 cut(s) 217, 581
Hpy188I TCNGA 6 cut(s) 51, 139, 182, 341, 463, 903
Hpy188III TCNNGA 9 cut(s) 175, 235, 271, 328, 397, 518, 572, 689, 871
Hpy8I GTNNAC 2 cut(s) 217, 581
Hpy99I CGWCG 3 cut(s) 133, 383, 386
HpyAV CCTTC 5 cut(s) 83, 253, 828, 868, 954
HpyCH4III ACNGT 2 cut(s) 368, 615
HpyCH4IV ACGT 4 cut(s) 219, 246, 479, 647
HpyCH4V TGCA 6 cut(s) 20, 593, 698, 839, 938, 957
HpyF10VI GCNNNNNNNGC 1 cut(s) 433
HpyF3I CTNAG 8 cut(s) 48, 79, 338, 440, 462, 488, 809, 885
HpySE526I ACGT 4 cut(s) 219, 246, 479, 647
Hsp92II CATG 5 cut(s) 127, 530, 575, 692, 913
HspAI GCGC 1 cut(s) 497
Ksp22I TGATCA 1 cut(s) 568
Kzo9I GATC 6 cut(s) 177, 324, 399, 568, 906, 940
Lsp1109I GCAGC 2 cut(s) 423, 633
LweI GCATC 1 cut(s) 399
MaeI CTAG 2 cut(s) 822, 964
MaeII ACGT 4 cut(s) 219, 246, 479, 647
MaeIII GTNAC 1 cut(s) 515
MalI GATC 6 cut(s) 179, 326, 401, 570, 908, 942
MboI GATC 6 cut(s) 177, 324, 399, 568, 906, 940
MboII GAAGA 5 cut(s) 322, 347, 890, 916, 943
MflI RGATCY 2 cut(s) 324, 940
MhlI GDGCHC 1 cut(s) 688
MluCI AATT 6 cut(s) 6, 12, 203, 556, 588, 720
MlyI GAGTC 1 cut(s) 872
MroXI GAANNNNTTC 1 cut(s) 170
MslI CAYNNNNRTG 1 cut(s) 693
MspA1I CMGCKG 1 cut(s) 307
MspI CCGG 2 cut(s) 551, 948
MspR9I CCNGG 1 cut(s) 494
Mva1269I GAATGC 1 cut(s) 940
MvaI CCWGG 1 cut(s) 494
MwoI GCNNNNNNNGC 1 cut(s) 433
NdeII GATC 6 cut(s) 177, 324, 399, 568, 906, 940
NlaIII CATG 5 cut(s) 127, 530, 575, 692, 913
NlaIV GGNNCC 2 cut(s) 161, 374
NmeAIII GCCGAG 1 cut(s) 171
NmuCI GTSAC 1 cut(s) 515
NspI RCATGY 1 cut(s) 530
PaeR7I CTCGAG 1 cut(s) 404
PagI TCATGA 2 cut(s) 571, 688
PcsI WCGNNNNNNNCGW 1 cut(s) 390
PctI GAATGC 1 cut(s) 940
PdmI GAANNNNTTC 1 cut(s) 170
PfeI GAWTC 4 cut(s) 140, 295, 532, 842
PflMI CCANNNNNTGG 1 cut(s) 124
PkrI GCNGC 3 cut(s) 422, 438, 623
PleI GAGTC 1 cut(s) 872
PpsI GAGTC 1 cut(s) 872
Ppu21I YACGTR 3 cut(s) 220, 247, 480
Psp124BI GAGCTC 1 cut(s) 688
Psp1406I AACGTT 1 cut(s) 647
Psp6I CCWGG 1 cut(s) 492
PspFI CCCAGC 1 cut(s) 861
PspGI CCWGG 1 cut(s) 492
PspN4I GGNNCC 2 cut(s) 161, 374
PspPI GGNCC 2 cut(s) 159, 223
PspXI VCTCGAGB 1 cut(s) 404
PstI CTGCAG 2 cut(s) 22, 841
PsuI RGATCY 2 cut(s) 324, 940
PvuII CAGCTG 1 cut(s) 307
RsaI GTAC 4 cut(s) 245, 290, 410, 612
RsaNI GTAC 4 cut(s) 244, 289, 409, 611
RseI CAYNNNNRTG 1 cut(s) 693
SacI GAGCTC 1 cut(s) 688
SalI GTCGAC 1 cut(s) 579
SatI GCNGC 3 cut(s) 421, 437, 622
Sau3AI GATC 6 cut(s) 177, 324, 399, 568, 906, 940
Sau96I GGNCC 2 cut(s) 159, 223
SchI GAGTC 1 cut(s) 872
ScrFI CCNGG 1 cut(s) 494
SduI GDGCHC 1 cut(s) 688
SfaNI GCATC 1 cut(s) 399
SfcI CTRYAG 2 cut(s) 18, 837
Sfr274I CTCGAG 1 cut(s) 404
SinI GGWCC 1 cut(s) 159
SlaI CTCGAG 1 cut(s) 404
SmiMI CAYNNNNRTG 1 cut(s) 693
SmlI CTYRAG 2 cut(s) 404, 828
SmoI CTYRAG 2 cut(s) 404, 828
Sse9I AATT 6 cut(s) 6, 12, 203, 556, 588, 720
SsiI CCGC 3 cut(s) 211, 420, 474
SspMI CTAG 2 cut(s) 822, 964
SstI GAGCTC 1 cut(s) 688
StyD4I CCNGG 1 cut(s) 492
StyI CCWWGG 1 cut(s) 920
TaaI ACNGT 2 cut(s) 368, 615
TaiI ACGT 4 cut(s) 222, 249, 482, 650
TaqI TCGA 3 cut(s) 174, 405, 580
TasI AATT 6 cut(s) 6, 12, 203, 556, 588, 720
TatI WGTACW 2 cut(s) 288, 610
TauI GCSGC 1 cut(s) 423
TfiI GAWTC 4 cut(s) 140, 295, 532, 842
TscAI CASTG 1 cut(s) 705
TseFI GTSAC 1 cut(s) 515
TseI GCWGC 2 cut(s) 436, 621
Tsp45I GTSAC 1 cut(s) 515
TspDTI ATGAA 3 cut(s) 17, 524, 944
TspRI CASTG 1 cut(s) 705
Van91I CCANNNNNTGG 1 cut(s) 124
VpaK11BI GGWCC 1 cut(s) 159
XagI CCTNNNNNAGG 2 cut(s) 497, 886
XapI RAATTY 5 cut(s) 6, 12, 203, 556, 720
XceI RCATGY 1 cut(s) 530
XcmI CCANNNNNNNNNTGG 1 cut(s) 153
XhoI CTCGAG 1 cut(s) 404
XmiI GTMKAC 2 cut(s) 216, 580
XmnI GAANNNNTTC 1 cut(s) 170
XspI CTAG 2 cut(s) 822, 964
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.