pycom02g16420
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
13571731 .. 13574640
2910 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g16420.5

Sequence Viewer

Length: 1194 bp
ATGGAACTTTTTCAATATCCATGGAACTTTTTGATACTATGCTGCTTTAGCAAGGACCCACCTGAGCAGACCAAAGAATCGACCAAAACGGTGCGCCTCAGTAGTGGCGGTAAAAGGAAAATTCAAAAAATCCATATACTGGTCCGGTATCTGTCTCTGGCTTTTCAATTCCCAGAAGCTCTCCCTCTAGAAAGAAAAATCCCAGAATTTCATTCCGGAAAAACCCACAGGAAAATGGAATCAAAAGCCCAGAAACCGCAAGAATCCTCGAAGAAAGATTGGTCCTTGCGAGACTTCGAGATCGGAAAACCCCTCGGAAAGGGGAAATTCGGCCGAGTCTACGTCGCCCGAGAAGCCAAGAGCAAGTACGTAGTGGCATTGAAGGTAATATTCAAGGAGCAGATCGAGAAGTACAAGATTCAGCACCAGCTGAGGAGGGAGATGGAGATCCAGACCAGCCTCCGCCACCCCAACATCCTCCGCCTTTACGGCTGGTTCCACGATGACGACCGCATCTTCTTGATCCTCGAGTACGCTCACGGCGGAGAGCTCTACGGACTTCTCAGGAAAACTGCCTACCTTTCGGAGAAACAGGCCGCCACTTATATTTTGAGCTTGACTGAAGCGTTGGCGTATTGTCACGAAAAGCATGTGATTCATAGGGACATCAAGCCTGAAAATTTGCTATTGGATCATGAGGGTCGATTGAAAATTGCAGACTTTGGATGGTCTGTACAGTCAAGAAGCAAGAGGCATACCATGTGTGGAACTCTAGATTATTTAGCACCAGAAATGGTGGAGAACAAAGCTCATGATTATGCTGTTGATAACTGGACTTTAGGCGTTCTTTGCTATGAGTTCCTCTTTGGTATTCCTCCCTTTGAGGCCGAAAGTCAAAAGGATACATTCAAAAGGATAATGAAGGTTGACCTAAGCTTCCCAGCTGAACCTCAAGTTTCCGCGGAGGCTAAACATCTCATTACCAGGCTTCTCGTCAAGGACTCCTCAAAGAGGCTGTCTCTTCAAAAGATCGATGGAACACCCTTGGATAATCAAGAACGCAGATCCCTCCGGCATTTGCAAATAGCTTGCGTTTCTCGCTTTCGTCATGCTCTAACCACGGATGTGAGCGCAGCTGAATTTTGTAAATTTCGGTCAGAATCTCATCAGACAAGAGGCGATATATTTCTCTAA

Protein Analysis

398

Amino Acids

46.28

Weight (kDa)

9.34

Isoelectric Point (pI)

46.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 139
AccI GTMKAC 1 cut(s) 339
AccII CGCG 1 cut(s) 962
AccIII TCCGGA 1 cut(s) 215
AciI CCGC 9 cut(s) 108, 257, 463, 481, 511, 543, 597, 960, 962
AclWI GGATC 4 cut(s) 442, 517, 699, 1059
AcoI YGGCCR 1 cut(s) 331
AcsI RAATTY 6 cut(s) 120, 206, 326, 679, 1139, 1148
AcuI CTGAAG 1 cut(s) 642
AfaI GTAC 4 cut(s) 368, 413, 533, 735
AfiI CCNNNNNNNGG 3 cut(s) 139, 319, 1011
AgsI TTSAA 8 cut(s) 14, 125, 167, 382, 394, 709, 910, 1025
AjnI CCWGG 1 cut(s) 983
AleI CACNNNNGTG 1 cut(s) 1124
AluBI AGCT 9 cut(s) 179, 430, 550, 615, 809, 936, 944, 1088, 1136
AluI AGCT 9 cut(s) 179, 430, 550, 615, 809, 936, 944, 1088, 1136
Alw21I GWGCWC 1 cut(s) 552
Alw26I GTCTC 3 cut(s) 159, 285, 1023
AlwI GGATC 4 cut(s) 442, 517, 699, 1059
Ama87I CYCGRG 2 cut(s) 348, 527
Aor13HI TCCGGA 1 cut(s) 215
AoxI GGCC 3 cut(s) 331, 594, 885
ApeKI GCWGC 2 cut(s) 42, 1133
ApoI RAATTY 6 cut(s) 120, 206, 326, 679, 1139, 1148
ArsI GACNNNNNNTTYG 2 cut(s) 1001, 1033
Asp700I GAANNNNTTC 1 cut(s) 9
AspLEI GCGC 2 cut(s) 96, 1133
AspS9I GGNCC 3 cut(s) 55, 142, 282
AvaI CYCGRG 2 cut(s) 348, 527
AvaII GGWCC 3 cut(s) 55, 142, 282
BanII GRGCYC 1 cut(s) 552
Bbv12I GWGCWC 1 cut(s) 552
BbvCI CCTCAGC 1 cut(s) 431
BbvI GCAGC 2 cut(s) 29, 1145
BccI CCATC 3 cut(s) 436, 720, 1028
BceAI ACGGC 2 cut(s) 505, 556
BciT130I CCWGG 1 cut(s) 985
BciVI GTATCC 1 cut(s) 895
BcoDI GTCTC 3 cut(s) 159, 285, 1023
BfaI CTAG 2 cut(s) 188, 773
BfuI GTATCC 1 cut(s) 895
BglI GCCNNNNNGGC 1 cut(s) 489
BisI GCNGC 3 cut(s) 43, 597, 1134
BlsI GCNGC 3 cut(s) 44, 598, 1135
Bme1390I CCNGG 1 cut(s) 985
Bme18I GGWCC 3 cut(s) 55, 142, 282
BmeT110I CYCGRG 2 cut(s) 348, 527
BmgT120I GGNCC 3 cut(s) 55, 142, 282
BmiI GGNNCC 2 cut(s) 57, 497
BmrFI CCNGG 1 cut(s) 985
BmsI GCATC 1 cut(s) 522
BplI GAGNNNNNCTC 2 cut(s) 1003, 1035
Bpu10I CCTNAGC 3 cut(s) 63, 431, 932
BpuEI CTTGAG 1 cut(s) 936
Bsa29I ATCGAT 1 cut(s) 1032
BsaAI YACGTR 1 cut(s) 370
BsaBI GATNNNNATC 1 cut(s) 446
BsaJI CCNNGG 5 cut(s) 20, 313, 960, 1044, 1119
BsaWI WCCGGW 2 cut(s) 144, 215
Bsc4I CCNNNNNNNGG 3 cut(s) 139, 319, 1011
Bse1I ACTGG 2 cut(s) 144, 836
Bse8I GATNNNNATC 1 cut(s) 446
BseAI TCCGGA 1 cut(s) 215
BseBI CCWGG 1 cut(s) 985
BseCI ATCGAT 1 cut(s) 1032
BseDI CCNNGG 5 cut(s) 20, 313, 960, 1044, 1119
BseGI GGATG 3 cut(s) 474, 731, 1129
BseJI GATNNNNATC 1 cut(s) 446
BseLI CCNNNNNNNGG 3 cut(s) 139, 319, 1011
BseMII CTCAG 4 cut(s) 54, 112, 422, 577
BseNI ACTGG 2 cut(s) 144, 836
BseRI GAGGAG 2 cut(s) 448, 994
BseX3I CGGCCG 1 cut(s) 331
BseXI GCAGC 2 cut(s) 29, 1145
BseYI CCCAGC 1 cut(s) 940
Bsh1236I CGCG 1 cut(s) 962
Bsh1285I CGRYCG 2 cut(s) 334, 511
BshFI GGCC 3 cut(s) 333, 596, 887
BshVI ATCGAT 1 cut(s) 1032
BsiEI CGRYCG 2 cut(s) 334, 511
BsiHKAI GWGCWC 1 cut(s) 552
BsiHKCI CYCGRG 2 cut(s) 348, 527
BsiSI CCGG 3 cut(s) 145, 216, 1072
BslFI GGGAC 1 cut(s) 677
BslI CCNNNNNNNGG 3 cut(s) 139, 319, 1011
BsmAI GTCTC 3 cut(s) 159, 285, 1023
BsmFI GGGAC 1 cut(s) 677
BsnI GGCC 3 cut(s) 333, 596, 887
BsoBI CYCGRG 2 cut(s) 348, 527
Bsp1286I GDGCHC 1 cut(s) 552
Bsp13I TCCGGA 1 cut(s) 215
Bsp1407I TGTACA 1 cut(s) 733
Bsp143I GATC 7 cut(s) 300, 402, 447, 522, 691, 1029, 1064
Bsp19I CCATGG 1 cut(s) 20
BspACI CCGC 9 cut(s) 108, 257, 463, 481, 511, 543, 597, 960, 962
BspANI GGCC 3 cut(s) 333, 596, 887
BspCNI CTCAG 4 cut(s) 55, 111, 423, 576
BspDI ATCGAT 1 cut(s) 1032
BspEI TCCGGA 1 cut(s) 215
BspFNI CGCG 1 cut(s) 962
BspHI TCATGA 2 cut(s) 694, 811
BspLI GGNNCC 2 cut(s) 57, 497
BspPI GGATC 4 cut(s) 442, 517, 699, 1059
BsrGI TGTACA 1 cut(s) 733
BsrI ACTGG 2 cut(s) 144, 836
BssECI CCNNGG 5 cut(s) 20, 313, 960, 1044, 1119
BssMI GATC 7 cut(s) 300, 402, 447, 522, 691, 1029, 1064
BssT1I CCWWGG 2 cut(s) 20, 1044
Bst2UI CCWGG 1 cut(s) 985
Bst4CI ACNGT 2 cut(s) 91, 738
Bst6I CTCTTC 1 cut(s) 1026
BstAUI TGTACA 1 cut(s) 733
BstBAI YACGTR 1 cut(s) 370
BstC8I GCNNGC 1 cut(s) 1090
BstDEI CTNAG 5 cut(s) 63, 98, 431, 563, 932
BstDSI CCRYGG 3 cut(s) 20, 960, 1119
BstENI CCTNNNNNAGG 2 cut(s) 317, 1009
BstF5I GGATG 3 cut(s) 474, 731, 1129
BstFNI CGCG 1 cut(s) 962
BstHHI GCGC 2 cut(s) 96, 1133
BstKTI GATC 7 cut(s) 303, 405, 450, 525, 694, 1032, 1067
BstMAI GTCTC 3 cut(s) 159, 285, 1023
BstMBI GATC 7 cut(s) 300, 402, 447, 522, 691, 1029, 1064
BstMCI CGRYCG 2 cut(s) 334, 511
BstMWI GCNNNNNNNGC 5 cut(s) 48, 353, 489, 849, 1098
BstNI CCWGG 1 cut(s) 985
BstNSI RCATGY 1 cut(s) 653
BstSCI CCNGG 1 cut(s) 983
BstSNI TACGTA 1 cut(s) 370
BstUI CGCG 1 cut(s) 962
BstV1I GCAGC 2 cut(s) 29, 1145
BstX2I RGATCY 2 cut(s) 447, 1064
BstYI RGATCY 2 cut(s) 447, 1064
BstZI CGGCCG 1 cut(s) 331
Bsu15I ATCGAT 1 cut(s) 1032
BsuI GTATCC 1 cut(s) 895
BsuRI GGCC 3 cut(s) 333, 596, 887
BsuTUI ATCGAT 1 cut(s) 1032
BtgI CCRYGG 3 cut(s) 20, 960, 1119
BtsCI GGATG 3 cut(s) 474, 731, 1129
Cac8I GCNNGC 1 cut(s) 1090
CciI TCATGA 2 cut(s) 694, 811
CfoI GCGC 2 cut(s) 96, 1133
Cfr13I GGNCC 3 cut(s) 55, 142, 282
Cfr42I CCGCGG 1 cut(s) 963
ClaI ATCGAT 1 cut(s) 1032
Csp6I GTAC 4 cut(s) 367, 412, 532, 734
CviAII CATG 6 cut(s) 21, 650, 695, 760, 812, 1109
CviQI GTAC 4 cut(s) 367, 412, 532, 734
DdeI CTNAG 5 cut(s) 63, 98, 431, 563, 932
DpnI GATC 7 cut(s) 302, 404, 449, 524, 693, 1031, 1066
DpnII GATC 7 cut(s) 300, 402, 447, 522, 691, 1029, 1064
EaeI YGGCCR 1 cut(s) 331
EagI CGGCCG 1 cut(s) 331
Eam1104I CTCTTC 1 cut(s) 1026
EarI CTCTTC 1 cut(s) 1026
EciI GGCGGA 3 cut(s) 452, 470, 558
Ecl136II GAGCTC 1 cut(s) 550
EclXI CGGCCG 1 cut(s) 331
Eco105I TACGTA 1 cut(s) 370
Eco130I CCWWGG 2 cut(s) 20, 1044
Eco24I GRGCYC 1 cut(s) 552
Eco47I GGWCC 3 cut(s) 55, 142, 282
Eco52I CGGCCG 1 cut(s) 331
Eco53kI GAGCTC 1 cut(s) 550
Eco57I CTGAAG 1 cut(s) 642
Eco88I CYCGRG 2 cut(s) 348, 527
EcoICRI GAGCTC 1 cut(s) 550
EcoNI CCTNNNNNAGG 2 cut(s) 317, 1009
EcoO109I RGGNCCY 1 cut(s) 55
EcoRII CCWGG 1 cut(s) 983
EcoT14I CCWWGG 2 cut(s) 20, 1044
EcoT38I GRGCYC 1 cut(s) 552
ErhI CCWWGG 2 cut(s) 20, 1044
FaeI CATG 6 cut(s) 24, 653, 698, 763, 815, 1112
FaqI GGGAC 1 cut(s) 677
FatI CATG 6 cut(s) 20, 649, 694, 759, 811, 1108
FblI GTMKAC 1 cut(s) 339
Fnu4HI GCNGC 3 cut(s) 43, 597, 1134
FokI GGATG 3 cut(s) 461, 738, 1136
FriOI GRGCYC 1 cut(s) 552
Fsp4HI GCNGC 3 cut(s) 43, 597, 1134
FspBI CTAG 2 cut(s) 188, 773
GlaI GCGC 2 cut(s) 95, 1132
GluI GCNGC 3 cut(s) 43, 597, 1134
GsaI CCCAGC 1 cut(s) 944
HaeIII GGCC 3 cut(s) 333, 596, 887
HapII CCGG 3 cut(s) 145, 216, 1072
HhaI GCGC 2 cut(s) 96, 1133
Hin1II CATG 6 cut(s) 24, 653, 698, 763, 815, 1112
Hin6I GCGC 2 cut(s) 94, 1131
HinP1I GCGC 2 cut(s) 94, 1131
HincII GTYRAC 1 cut(s) 928
HindII GTYRAC 1 cut(s) 928
HindIII AAGCTT 1 cut(s) 934
HinfI GANTC 8 cut(s) 77, 239, 263, 336, 418, 655, 1001, 1160
HpaII CCGG 3 cut(s) 145, 216, 1072
Hpy166II GTNNAC 2 cut(s) 340, 928
Hpy188I TCNGA 5 cut(s) 305, 317, 586, 1159, 1170
Hpy8I GTNNAC 2 cut(s) 340, 928
Hpy99I CGWCG 1 cut(s) 347
HpyAV CCTTC 2 cut(s) 376, 916
HpyCH4III ACNGT 2 cut(s) 91, 738
HpyCH4IV ACGT 2 cut(s) 342, 369
HpyCH4V TGCA 2 cut(s) 716, 1081
HpyF10VI GCNNNNNNNGC 5 cut(s) 48, 353, 489, 849, 1098
HpyF3I CTNAG 5 cut(s) 63, 98, 431, 563, 932
HpySE526I ACGT 2 cut(s) 342, 369
Hsp92II CATG 6 cut(s) 24, 653, 698, 763, 815, 1112
HspAI GCGC 2 cut(s) 94, 1131
Kpn2I TCCGGA 1 cut(s) 215
KspI CCGCGG 1 cut(s) 963
Kzo9I GATC 7 cut(s) 300, 402, 447, 522, 691, 1029, 1064
LmnI GCTCC 1 cut(s) 397
Lsp1109I GCAGC 2 cut(s) 29, 1145
LweI GCATC 1 cut(s) 522
MaeI CTAG 2 cut(s) 188, 773
MaeII ACGT 2 cut(s) 342, 369
MaeIII GTNAC 1 cut(s) 638
MalI GATC 7 cut(s) 302, 404, 449, 524, 693, 1031, 1066
MboI GATC 7 cut(s) 300, 402, 447, 522, 691, 1029, 1064
MboII GAAGA 3 cut(s) 283, 508, 1013
MflI RGATCY 2 cut(s) 447, 1064
MhlI GDGCHC 1 cut(s) 552
MluCI AATT 8 cut(s) 120, 167, 206, 326, 679, 711, 1139, 1148
MlyI GAGTC 2 cut(s) 345, 995
MroI TCCGGA 1 cut(s) 215
MroXI GAANNNNTTC 1 cut(s) 9
MslI CAYNNNNRTG 2 cut(s) 816, 1124
MspA1I CMGCKG 4 cut(s) 430, 944, 962, 1136
MspI CCGG 3 cut(s) 145, 216, 1072
MspR9I CCNGG 1 cut(s) 985
MvaI CCWGG 1 cut(s) 985
MvnI CGCG 1 cut(s) 962
MwoI GCNNNNNNNGC 5 cut(s) 48, 353, 489, 849, 1098
NcoI CCATGG 1 cut(s) 20
NdeII GATC 7 cut(s) 300, 402, 447, 522, 691, 1029, 1064
NlaIII CATG 6 cut(s) 24, 653, 698, 763, 815, 1112
NlaIV GGNNCC 2 cut(s) 57, 497
NmeAIII GCCGAG 1 cut(s) 359
NmuCI GTSAC 1 cut(s) 638
NspI RCATGY 1 cut(s) 653
OliI CACNNNNGTG 1 cut(s) 1124
PaeR7I CTCGAG 1 cut(s) 527
PagI TCATGA 2 cut(s) 694, 811
PdmI GAANNNNTTC 1 cut(s) 9
PfeI GAWTC 6 cut(s) 77, 239, 263, 418, 655, 1160
PflMI CCANNNNNTGG 1 cut(s) 139
PkrI GCNGC 3 cut(s) 44, 598, 1135
PleI GAGTC 2 cut(s) 344, 995
PpsI GAGTC 2 cut(s) 344, 995
Ppu21I YACGTR 1 cut(s) 370
PpuMI RGGWCCY 1 cut(s) 55
Psp124BI GAGCTC 1 cut(s) 552
Psp5II RGGWCCY 1 cut(s) 55
Psp6I CCWGG 1 cut(s) 983
PspFI CCCAGC 1 cut(s) 940
PspGI CCWGG 1 cut(s) 983
PspN4I GGNNCC 2 cut(s) 57, 497
PspPI GGNCC 3 cut(s) 55, 142, 282
PspPPI RGGWCCY 1 cut(s) 55
PspXI VCTCGAGB 1 cut(s) 527
PsuI RGATCY 2 cut(s) 447, 1064
PvuII CAGCTG 3 cut(s) 430, 944, 1136
RsaI GTAC 4 cut(s) 368, 413, 533, 735
RsaNI GTAC 4 cut(s) 367, 412, 532, 734
RseI CAYNNNNRTG 2 cut(s) 816, 1124
SacI GAGCTC 1 cut(s) 552
SacII CCGCGG 1 cut(s) 963
SatI GCNGC 3 cut(s) 43, 597, 1134
Sau3AI GATC 7 cut(s) 300, 402, 447, 522, 691, 1029, 1064
Sau96I GGNCC 3 cut(s) 55, 142, 282
SchI GAGTC 2 cut(s) 345, 995
ScrFI CCNGG 1 cut(s) 985
SduI GDGCHC 1 cut(s) 552
SfaNI GCATC 1 cut(s) 522
Sfr274I CTCGAG 1 cut(s) 527
Sfr303I CCGCGG 1 cut(s) 963
SgrBI CCGCGG 1 cut(s) 963
SinI GGWCC 3 cut(s) 55, 142, 282
SlaI CTCGAG 1 cut(s) 527
SmiMI CAYNNNNRTG 2 cut(s) 816, 1124
SmlI CTYRAG 2 cut(s) 527, 951
SmoI CTYRAG 2 cut(s) 527, 951
SnaBI TACGTA 1 cut(s) 370
Sse9I AATT 8 cut(s) 120, 167, 206, 326, 679, 711, 1139, 1148
SsiI CCGC 9 cut(s) 108, 257, 463, 481, 511, 543, 597, 960, 962
SspI AATATT 1 cut(s) 390
SspMI CTAG 2 cut(s) 188, 773
SstI GAGCTC 1 cut(s) 552
StyD4I CCNGG 1 cut(s) 983
StyI CCWWGG 2 cut(s) 20, 1044
TaaI ACNGT 2 cut(s) 91, 738
TaiI ACGT 2 cut(s) 345, 372
TaqI TCGA 7 cut(s) 80, 269, 297, 405, 528, 703, 1032
TaqII GACCGA 1 cut(s) 1143
TasI AATT 8 cut(s) 120, 167, 206, 326, 679, 711, 1139, 1148
TatI WGTACW 2 cut(s) 411, 733
TauI GCSGC 1 cut(s) 599
TfiI GAWTC 6 cut(s) 77, 239, 263, 418, 655, 1160
TseFI GTSAC 1 cut(s) 638
TseI GCWGC 2 cut(s) 42, 1133
Tsp45I GTSAC 1 cut(s) 638
TspDTI ATGAA 3 cut(s) 200, 647, 935
TspGWI ACGGA 2 cut(s) 570, 1136
Van91I CCANNNNNTGG 1 cut(s) 139
VpaK11BI GGWCC 3 cut(s) 55, 142, 282
XagI CCTNNNNNAGG 2 cut(s) 317, 1009
XapI RAATTY 6 cut(s) 120, 206, 326, 679, 1139, 1148
XbaI TCTAGA 2 cut(s) 187, 772
XceI RCATGY 1 cut(s) 653
XhoI CTCGAG 1 cut(s) 527
XmiI GTMKAC 1 cut(s) 339
XmnI GAANNNNTTC 1 cut(s) 9
XspI CTAG 2 cut(s) 188, 773
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.