Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002105

Physical Location & Seq

Genomic Coordinates Forward (+)

2022433 .. 2033912

Gene Structure 11480 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G06530.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 6594 bp

ATGAGTTCTTCAATAGTGTCACAGTTACAGGCTCTCAAGTCAGTGTTACAAGCCGATACAGAGCCTTCCAAGAGACCTTTCACACGCCCTTCGATTCTCTTCAGTCCTAAAGAAGCAGCTGATTTCGATATCGAATCAATTTACGAGCTCGGGCTCAAAGGTCTAGAAGTACTTGGAAACAAAGATGAGAGGTTTAAAAATTACATGAACGACTTGTTTAGTCATAAAAGTAAAGAAATTGATAGGGAATTGCTGGGTAAAGAAGAAAATGCTCGGATTGATTCATCAATCAGTTCGTATCTACGTTTACTCTCTGGTTATCTTCAATTTCGTGCTTCCTTGGAGACCCTTGAGTATCTCATACGACGATACAAGATTCATATATACAACTTGGAAGATGTGGTTCTATGCGCCTTGCCATACCATGACACACATGCCTTTGTCCGCATTGTTCAACTGCTTTCTACTGGAAATTCCAAGTGGAAATTTCTGGATGGTGTTAAAAATTCAGGTGCTCCACCTCCTAGATCGGTTATCGTTCAGCAATGTATACGTGATAAACAAGTTTTGGAGGCCTTGTGTGACTATGCATCTCGTACTAAGAAGTATCAGCCTTCAAAACCTGTGGTTAGCTTCTCCACCGCAGTTGTTGTTGGGGTGCTCGGTTCAGTTCCAACTGTTGATGGAGATATTGTAAAGACGATTTTGCCATTTGTGGACTCTGGTCTTCAATCTGGTGTGAAAGGATGTTTAGATCAACAGGCTGGAGCGTTAATGGTTGTTGGCATGTTGGCAAACAGAGCTGTGCTAAATACTAATCTTATCAAGCGCTTGATGAGGTCCATCATCGACATTGGTCGTGAACATGCCAAGGAATCTTCTGACCCGCATTCGCTTCGATTGTCACTTATGGCCTTGATCAATTTTGTTCAGCTGCAATCTGTGGACTTGATCCCAAGGAAAGCATTGGATCTTTTTAACGAAATAAGAGATATTTCTGGTGTTCTTTTAGGCTTGTCCAAAGAGTTCAACATCAAAAGATTCCTGGCAGTGCTACTGGATTCTTTACTTTTTTACAGTTCGTCTGATGATAAATGCTGCGAAGTTTTAGCTTCAATAATTGAGACTGTTCCCGTAAGCAATTTGGTTGATCATTTGATCTCCAAGGTTTTCTCTTTATGTATGACACAATACCAGAAGAACAGTGATTTTAGATCTTCTACATCTGGAAGCTGGGCCAAGAAATTTCTGGTTGTTGTAAGCAAGAAGTATCCTGCTGAACTACGTGCCGCAGTTCCTAAATTTTTAGAGGCTACTGAAGTTCAGTCGAAGAAAGAGGATTTAAAGCTAGAGATGTTGTCTTGTATGCTGGATGGGAATTCAGACATGTCTCACCCGTTTGTGGATTCAAAATTGTGGTTCCGGCTCCACCATCCCAGGGCTGCTGTACGTTGTGCCGCGCTTTCTAGTCTAAATGGTGTTCTCAAGGATGATAGCTCTAAAGCAGAGAACCTTGTCACAATTCAGGATGCTATACTGCGTCAGCTTTGGGATGATGATCTGGCTGTTGTTCAGGCTGCCCTCTCTTTCGATAAGTTGCCCAATATAATAACCTCTTCTGGTCTTCTGGATGCTTTGCTTCATGTGGTGAAACGATGTGTTGGCATTCTCGTATCAGGAGTATCACATAATGTTCAACTGGCAGTTGATGTTGTTGCTTTGTCTCTTAAAATTGCTGTCTCAAGCTTCGGTAATCAAACAGACTCTACTGAGAAAGTTACCTCTGCAATGTTCCCATTTCTCTTAATTCAGCCGAAGACGTGGAATTTAAATCTACTTGTGCTAAAGTTGGGAAAGGATGTTAACTGGCCACTTTTCAAGAATCTTGCTGCTGATGATGGAATGAAAAAGCTCCCCGATATCATGTCTACAAACTTATCCTCAATTAGCATGGATATTATTAACGATTTGGGAGAAGCACTCTCCTTGGATCCTGATGAGCGTAGGATTGAGCTTATTGAGAGAGCGTGCAACTATAAGCTCTCTGAAGTTTTGGAAACATGCAGCAATATCAAATGTTCAGAACAGGATCGTAACAAGTTGCAGAAGGGACTACTGATCCGTGAAAGTGTGTCCGCATTGAACATAGATGTCATTAACAAGCTGGTGGAAGCATTTATGATGCACCCTGCTGATTATATTCAGTGGCTTACTGTCAGTTGCCGAGATTCCACCTTGTCAAAGACACTGTTTTATATGATTTTGATGCATTCCCTGCAGAAGATGAATTCTTCATCTGACCCTAGTCAACTTTTGGATCTTTTCGAACTTTGCTTTCCTGTTTTGAAGACTGAGTGGGAAGAACTTGAGGTCGAGGTTGATGTTTCTCTGAAAGAGCTGTCGAAAAGCAACTGCCAAGAACTCCTATATCAACTCCTTGATACCTCTGATTTTACTGCTCTGAATTCGAAGGTTCTGATATGCTTGTTTTGGAAGTTGGGCGAGTCATTCATTAAACTTGAACCTGCCCACGATGCTTCGGTTTTGAACAAAAGGTTATCTAGCGGACTTGAGGATTTGTTTTTCTTTTTTGCAACAACTCGGTTGCGGCATGTCTTCAAGGAACACCTTCATTTCCGTGTGAGAGAAGCCAAAGTCTGTCCTGTTTTGTTTCTATCCCGACTGATCTCACGAGAAGATGTTCCTCCTCTTGTCCAAATTGAAAGTCTCAGATGTTTTTCGTATCTTTGCTCTAGCGGGAATAATGAATGGTTGATTCAAGTTTTTTCAAGCTTTCCTGTACTTTTGGTTCCCATGTCAAGTGATAATCAGGACGTTAAAGCAGCTGCCATTAATTGTATCGAGGCACTCTTCAACCTTCGTGCTGCAATCTACGGTAGTTCTTTTGATGAACTTTTGGGAATGATCGTGCAACAAAGGAGGCTTATATTGTCAGACAATAAGTTTTTCGCATCGTACTTGACATCGTTGCTCAGTTCAACCACTAATGACCTTCTAGTGCCAGTTGGCCTGCAAAAAAGGTTTGATCAATCCACAAAAGAAAACATTCTTTCGGTCATTTTATTGTGTGCGGAAGACCTACCTGCTTATGGGAAGCTAAGAGTCCTATCTTTGCTAAAAGATCTGGGCATCATGCTTATGCGTGATGAAATTGTTAAGTTATTGTCTCAACTTCTTGATAAACGTAGTCAATACTACTATAAGCTGGACAAAACTTCCCAGCCATTATCAGACACTGAGGTCGATTTATTATGCCTTCTTCTGGAGTGCTCCATGATGCGAACATCATCGTTTAAAGGGCAGTCTCTTGATGATCATATACTGAGCGCATTGAATGTGGATTGTATGGCTTCAGAACGTCCTGCTGTTATTTCTCCTTGTCTTACCATTTTGGAGAAGCTAAGCAATCGATTTTATGATGAACTGCAGACTGATGTTCAGATTCGTTTCTTCCACAAACTTGTGTCTATGTTTCGAAGTTCAAATGGCAGTATACAAAATGGTGCCAAAGAAGCTGTCTTACGCCTGAAGCTTTCTTCTTCAACGGTGGTCCTTGCTCTTGATCGTATCACTCAGCAGGATACTCTTGTTATTGGTTCTTTGAGCAAGAAGAAGAAACAGAAGAAAAATTCAAAGTCATGTCCAGAAGAAGACATAAATAGCGAGGAATTTCGAAGTGGGGAAAAGGCTCTCTCTTTCATTGCCTCATTACTTGACATGCTGCTTCTCAAGAAAGATCTAACTCACAGGGAGTCCCTCATAAGGCCCTTGTTTAAGCTCCTACAAAGATCCATGTCTAAAGAATGGGTGAAAATTGCTTTTTCAATTGAGGAAACGTCACTCCAGCCTCCACAGGATGTTCGTGAAACAACTCCTACCTTTATTTCTTCCATCCAACAGACTCTGCTCTTAATCCTGAAAGATATTTTTGATTCTCTGAATATGAATCCTTTGAAGGCTGAAGTAGCAAATGAAATCAATGTCAAAATGCTGGTTGAGTTGGCTCATTCATCAAATGATGGAGTCACACGGAACCATATCTTCTCCTTGTTCACTGCAATTGTTAAATTTGTCCCTGATAAGGTTTTGGACCATATTATCAGCATACTTACACTTGTTGGTGAATCAACTGTGACACAGATTGATAGTCACTCGAAGTCTATCTTTGAGGGGTTTATATCAATGGTCATTCCATTTTGGCTGTCTAAGACTAAGAGTGAGGAGCAGTTGTTACAGATTTTTGTGAAAGTCTTACCTGATATTGTTGAGCATAGAAGGCGTTCAATTGTAGCTTACTTGCTGGGAGTTATCGGTGAACGAAATGGCTTGCCTGCTTTGCTTGTCCTCTTATTTAAGTCTTTGATTTCAAGAAAAGACTCAGCTTGGCTTGGTAATGCCAACGTTTCTGAAAGTTTTGCTTCCATTGTTAAAAAAGAATGGGAGTATTCTTTTGCCATGGAAATATGTGAACAATATTCTTCTTCGACGTGGCTCTCATCCTTGGTCATACTTCTTCAAACTATCAGCAAAGACAGTAAACAATGTTTCTTACAGATGCGGCTTGTATTAGAATTTGTATTCCAGAAATTGCAAGACCCGGAATTTGCATTTGCAGTCTCACTGGAACCAAGAAATAATGTTTCTGTTGGCATCCAGCAAGAACTACAAGAGCTTATGAAGTGTTGTATATGTCTCCTGCAAGCTATTGATGCGAAAAAGGAGAAAGATGTGACTTCTTCAGTTAGAAATGAAATCAGAATGCGTATACATGATGTCTTAATGACTGTTACGGGAGCCATGGATCTGTCTATATATTTCAGGGTTGTTACTAGCTTGCTTCAGCAGCAGACAGATTATAATGGGACGAAAAAGGTACTTGGACTTATAAGTGAGAGAGCTAAGGACACCTCATCTTCTAAAATGAAACACAAGAGAAAGATTTCCAATCAAAAAGGAAGAAATTCTTGGTTGAACTTGGATGAGGTTGCTGTTGATTCTTTCGGGAAGATGTGTGAGGAGATTGTCCATCTGATTAATGCGACAGATGATGAGTCAGGTGTTCCAGTAAAACGAGCTGCCATTTCTACACTGGAAGTTTTGGCTGGCAGGTTTCCATCTGGTCATCCAATCTTCAGGAAATGCCTTGCAGCTGTTGCAGAATGCATCAGTTCAAAGAATTTGGGAGTCTCGTCCAGCTGTCTTCGAACAACTGGTGCACTGATCAATGTTCTTGGACCAAAGGCGCTCATTGAACTTCCATGCATAATGAAGAATTTGGTAAAACAGTCGCTTGAAGTATCATTTGCATCCCAGAGTGGTCGAAACGCAACAGCTGAAGAACAGTTGCTTATGCTGTCTGTTCTAGTCACTTTGGAAGCAGTGATTGATAAACTTGGAGGTTTCCTAAATCCTCATCTTGGAGATATTATGAAAATCATGGTGCTACATCCTGAATATGTATCTGACTTCGACAAGAATCTCAAGTCCAAAGCCAATGCCATTAGGAGGCTCCTTACTGATAAAATACCTGTTCGTCTCACTCTGCAACCACTTCTACGAATATACAATGAGGCTGTTAGTTCTGGGAATGCAAGCTTGGTGATTGCTTTTAATATGTTAGAAGATCTGGTTGTGAAAATGGATAGATCATCTATCGTTAGCAGCCATGGGAAGATTTTTGATCAGTGCTTAGTTGCCCTTGATATTCGACGTCTAAATCCAGCAGCAATTCAGAACATTGATGATGCTGAGAGAAGTGTAACTAGCGCAATGGTTGCTCTCACAAAGAAGCTAACGGAGTCCGAGTTCAGACCTCTCTTTATTAGGAGTATTGATTGGGCAGAGTCAGATGTTGTTGACGGATCAGGGAGTGAAAACAAGAGCATCGACCGAGCTATATCTTTCTATGGTCTGGTGGATCGACTCTGTGAGAGTCACAGGTCCATCTTTGTACCGTATTTCAAATACGTGCTTGATGGTATTGTAGCACATCTCACCACTGCTGAAGCTTCTGTTTCAACTAGGAAGAAAAAGAAAGCCAAAATTCAGCAAACTTCTGACTCTATACAACCAAAAAGCTGGCATCTTAGGGCATTAGTTCTTTCTTGCTTGAAGAATTGTTTTCTGCATGATACCGGCAGCTTGAAGTTTCTGGATACAAATAACTTCCAGGTGCTACTTAAGCCTATTGTATCACAGCTTGTTGTTGAACCTCCATCTTCTTTAAAGGAGCACCCACATGTACCATCTGTGGATGAGGTTGATGATTTATTGGTTTCATGCATCGGTCAAATGGCAGTAGCCTCAGGCTCTGACCTCCTCTGGAAACCGCTGAACCACGAGGTGCTAATGCAAACGAGGAGTGAGAGTGTACGGTCAAGGATGTTGAGTTTGAGAAGTGTGAAACAGATGCTGGATAATCTGAAAGAAGAGTATCTTGTGTTGCTTGCTGAAACCATTCCATTCTTGGCTGAGCTACTAGAAGACGTCGAGCTATCTGTTAAATCTTTGGCTCAAGATATTATCAAACAAATGGAAGAGATGAGCGGTGAAAGTCTGGCGGAATACCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000462 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006355 GO:0006356 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032040 GO:0032991 GO:0034455 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0045893 GO:0045935 GO:0045943 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1990904 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

BP28CT U3snoRNP10

Protein Analysis

2197

Amino Acids

246.32

Weight (kDa)

6.63

Isoelectric Point (pI)

45.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U3snoRNP10	PF12397	231 - 356	7.6e-20	U3 small nucleolar RNA-associated protein 10
ARM_At3g06530	PF24477	697 - 890	6.2e-65	At3g06530-like, ARM repeats
HEAT_HEATR1	PF23243	1422 - 1617	7.8e-53	HEATR1-like, HEAT repeats
BP28CT	PF08146	1905 - 2067	1.1e-37	BP28CT (NUC211) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0002105)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06530 AT3G06530 AT3G06530 AT3G06530 AT3G06530
fragaria_vesca	FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990 FvH4_7g26990
malus_domestica	MD07G1249300.v1.1
prunus_persica	Prupe.2G273000_v2.0.a1 Prupe.2G273000_v2.0.a1 Prupe.2G273000_v2.0.a1
pyrus_communis	pycom01g18810 pycom01g18840 pycom05g24490 pycom07g22250 pycom07g22260
rosa_chinensis	RchiOBHm_Chr1g0373711 RchiOBHm_Chr1g0373721 RchiOBHm_Chr5g0059891 RchiOBHm_Chr7g0224071
rosa_laevigata	RLG00000026806
rosa_multiflora	Rmu_co8395535.1_g000001 Rmu_sc0002606.1_g000003 Rmu_sc0002606.1_g000005 Rmu_sc0010519.1_g000004 Rmu_sc0023430.1_g000002
rosa_roxburghii	Rroxscaffold_4G00284050 Rroxscaffold_5G00353230
rosa_rugosa	Rorug01G0379200
rosa_samantha	Rh1AG388500 Rh1BG352900 Rh1CG365800 Rh1DG383300 Rh3AG266200 Rh3DG308600
rosa_wichuraiana	Rw1G034670 Rw3G029530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	4878, 4907
AasI	GACNNNNNNGTC	1 cut(s)	3260
AatII	GACGTC	2 cut(s)	5734, 6510
Acc36I	ACCTGC	3 cut(s)	2533, 3112, 5118
AccB1I	GGYRCC	1 cut(s)	3524
AccBSI	CCGCTC	1 cut(s)	6567
AccI	GTMKAC	4 cut(s)	550, 1928, 3514, 4786
AccII	CGCG	1 cut(s)	1460
AclI	AACGTT	1 cut(s)	4422
AcoI	YGGCCR	1 cut(s)	1868
AcyI	GRCGYC	2 cut(s)	5731, 6507
AdeI	CACNNNGTG	1 cut(s)	6364
AfaI	GTAC	9 cut(s)	171, 598, 1449, 2802, 2978, 4896, 5973, 6264, 6393
AfeI	AGCGCT	1 cut(s)	830
AfiI	CCNNNNNNNGG	8 cut(s)	1402, 1438, 3110, 3283, 3783, 4102, 5438, 5526
AflII	CTTAAG	1 cut(s)	6200
AflIII	ACRYGT	2 cut(s)	1386, 6259
AjiI	CACGTC	2 cut(s)	1821, 4509
AjnI	CCWGG	3 cut(s)	1044, 1436, 6189
AjuI	GAANNNNNNNTTGG	6 cut(s)	62, 94, 4969, 5001, 5600, 5632
AloI	GAACNNNNNNTCC	2 cut(s)	5810, 5842
Alw21I	GWGCWC	6 cut(s)	150, 517, 663, 3293, 5239, 6255
Alw44I	GTGCAC	1 cut(s)	5235
AlwNI	CAGNNNCTG	4 cut(s)	3257, 3925, 6332, 6433
Ama87I	CYCGRG	1 cut(s)	149
Aor51HI	AGCGCT	1 cut(s)	830
AoxI	GGCC	6 cut(s)	573, 912, 1236, 1868, 3028, 3785
ApaLI	GTGCAC	1 cut(s)	5235
ArsI	GACNNNNNNTTYG	6 cut(s)	2710, 2742, 3522, 3554, 4607, 4639
AseI	ATTAAT	2 cut(s)	2853, 5055
Asp700I	GAANNNNTTC	7 cut(s)	2628, 2700, 3066, 4300, 4960, 4981, 6477
AspLEI	GCGC	6 cut(s)	413, 831, 1462, 3350, 5266, 5789
AspS9I	GGNCC	7 cut(s)	840, 1236, 3571, 3786, 4111, 5255, 5961
AsuC2I	CCSGG	1 cut(s)	4619
AsuHPI	GGTGA	8 cut(s)	1385, 1660, 3841, 4154, 4346, 5632, 6007, 6581
AsuII	TTCGAA	5 cut(s)	2325, 2468, 3496, 3694, 5224
AvaI	CYCGRG	1 cut(s)	149
AvaII	GGWCC	5 cut(s)	840, 3571, 4111, 5255, 5961
AxyI	CCTNAGG	1 cut(s)	6325
BaeGI	GKGCMC	1 cut(s)	5239
BaeI	ACNNNNGTAYC	2 cut(s)	3594, 3627
BalI	TGGCCA	1 cut(s)	1870
BamHI	GGATCC	1 cut(s)	1990
BanI	GGYRCC	1 cut(s)	3524
BanII	GRGCYC	2 cut(s)	150, 156
BarI	GAAGNNNNNNTAC	2 cut(s)	3525, 3557
BauI	CACGAG	2 cut(s)	2691, 6359
BbsI	GAAGAC	9 cut(s)	719, 1616, 1823, 2354, 2608, 3102, 3678, 5213, 6510
Bbv12I	GWGCWC	6 cut(s)	150, 517, 663, 3293, 5239, 6255
BcgI	CGANNNNNNTGC	2 cut(s)	878, 912
BciT130I	CCWGG	3 cut(s)	1046, 1438, 6191
BciVI	GTATCC	3 cut(s)	1281, 3595, 6169
BclI	TGATCA	6 cut(s)	918, 1150, 3046, 3334, 5241, 5701
BcnI	CCSGG	1 cut(s)	4619
BfmI	CTRYAG	2 cut(s)	2276, 3446
BfoI	RGCGCY	2 cut(s)	832, 5267
BfrI	CTTAAG	1 cut(s)	6200
BfuAI	ACCTGC	3 cut(s)	2533, 3112, 5118
BfuI	GTATCC	3 cut(s)	1281, 3595, 6169
BglII	AGATCT	4 cut(s)	1214, 3142, 3757, 5644
BlpI	GCTNAGC	2 cut(s)	3422, 6492
BmcAI	AGTACT	1 cut(s)	171
Bme1390I	CCNGG	4 cut(s)	1046, 1438, 4619, 6191
Bme18I	GGWCC	5 cut(s)	840, 3571, 4111, 5255, 5961
BmeT110I	CYCGRG	1 cut(s)	149
BmgBI	CACGTC	2 cut(s)	1821, 4509
BmgT120I	GGNCC	7 cut(s)	840, 1236, 3571, 3786, 4111, 5255, 5961
BmiI	GGNNCC	9 cut(s)	1421, 1427, 1992, 2811, 3526, 4055, 4647, 4816, 5531
BmrFI	CCNGG	4 cut(s)	1046, 1438, 4619, 6191
BoxI	GACNNNNGTC	3 cut(s)	723, 855, 2304
BpiI	GAAGAC	9 cut(s)	719, 1616, 1823, 2354, 2608, 3102, 3678, 5213, 6510
BplI	GAGNNNNNCTC	2 cut(s)	1965, 1997
BpmI	CTGGAG	3 cut(s)	786, 3305, 3848
Bpu10I	CCTNAGC	1 cut(s)	4920
Bpu1102I	GCTNAGC	2 cut(s)	3422, 6492
Bpu14I	TTCGAA	5 cut(s)	2325, 2468, 3496, 3694, 5224
BpuEI	CTTGAG	9 cut(s)	20, 371, 1469, 1726, 2387, 2591, 3734, 5486, 6519
BpuMI	CCSGG	1 cut(s)	4619
Bsa29I	ATCGAT	1 cut(s)	3430
BsaAI	YACGTR	3 cut(s)	554, 1286, 5989
BsaBI	GATNNNNATC	1 cut(s)	1557
BsaHI	GRCGYC	2 cut(s)	5731, 6507
BsaI	GGTCTC	2 cut(s)	67, 338
Bsc4I	CCNNNNNNNGG	8 cut(s)	1402, 1438, 3110, 3283, 3783, 4102, 5438, 5526
Bse118I	RCCGGY	1 cut(s)	6155
Bse1I	ACTGG	9 cut(s)	472, 1062, 1704, 1871, 3023, 4647, 5084, 5115, 5236
Bse21I	CCTNAGG	1 cut(s)	6325
Bse3DI	GCAATG	4 cut(s)	551, 1794, 3720, 5796
Bse8I	GATNNNNATC	1 cut(s)	1557
BseBI	CCWGG	3 cut(s)	1046, 1438, 6191
BseCI	ATCGAT	1 cut(s)	3430
BseJI	GATNNNNATC	1 cut(s)	1557
BseLI	CCNNNNNNNGG	8 cut(s)	1402, 1438, 3110, 3283, 3783, 4102, 5438, 5526
BseMI	GCAATG	4 cut(s)	551, 1794, 3720, 5796
BseNI	ACTGG	9 cut(s)	472, 1062, 1704, 1871, 3023, 4647, 5084, 5115, 5236
BseRI	GAGGAG	5 cut(s)	2697, 4256, 5051, 6329, 6394
BseSI	GKGCMC	1 cut(s)	5239
BseYI	CCCAGC	4 cut(s)	253, 1233, 3240, 4321
Bsh1236I	CGCG	1 cut(s)	1460
Bsh1285I	CGRYCG	1 cut(s)	5911
BshFI	GGCC	6 cut(s)	575, 914, 1238, 1870, 3030, 3787
BshNI	GGYRCC	1 cut(s)	3524
BshVI	ATCGAT	1 cut(s)	3430
BsiEI	CGRYCG	1 cut(s)	5911
BsiHKAI	GWGCWC	6 cut(s)	150, 517, 663, 3293, 5239, 6255
BsiHKCI	CYCGRG	1 cut(s)	149
BsiSI	CCGG	3 cut(s)	1423, 4619, 6156
BslFI	GGGAC	4 cut(s)	2124, 3760, 4079, 4897
BslI	CCNNNNNNNGG	8 cut(s)	1402, 1438, 3110, 3283, 3783, 4102, 5438, 5526
BsmBI	CGTCTC	1 cut(s)	5561
BsmFI	GGGAC	4 cut(s)	2124, 3760, 4079, 4897
BsmI	GAATGC	6 cut(s)	889, 1665, 2269, 4785, 5186, 5614
BsnI	GGCC	6 cut(s)	575, 914, 1238, 1870, 3030, 3787
Bso31I	GGTCTC	2 cut(s)	67, 338
BsoBI	CYCGRG	1 cut(s)	149
Bsp119I	TTCGAA	5 cut(s)	2325, 2468, 3496, 3694, 5224
Bsp1286I	GDGCHC	7 cut(s)	150, 156, 517, 663, 3293, 5239, 6255
Bsp1720I	GCTNAGC	2 cut(s)	3422, 6492
Bsp19I	CCATGG	3 cut(s)	4476, 4818, 5686
BspANI	GGCC	6 cut(s)	575, 914, 1238, 1870, 3030, 3787
BspDI	ATCGAT	1 cut(s)	3430
BspFNI	CGCG	1 cut(s)	1460
BspLI	GGNNCC	9 cut(s)	1421, 1427, 1992, 2811, 3526, 4055, 4647, 4816, 5531
BspMAI	CTGCAG	2 cut(s)	2280, 3450
BspMI	ACCTGC	3 cut(s)	2533, 3112, 5118
BspT104I	TTCGAA	5 cut(s)	2325, 2468, 3496, 3694, 5224
BspT107I	GGYRCC	1 cut(s)	3524
BspTI	CTTAAG	1 cut(s)	6200
BspTNI	GGTCTC	2 cut(s)	67, 338
BsrBI	CCGCTC	1 cut(s)	6567
BsrDI	GCAATG	4 cut(s)	551, 1794, 3720, 5796
BsrFI	RCCGGY	1 cut(s)	6155
BsrI	ACTGG	9 cut(s)	472, 1062, 1704, 1871, 3023, 4647, 5084, 5115, 5236
BssAI	RCCGGY	1 cut(s)	6155
BssNAI	GTATAC	3 cut(s)	551, 3515, 4787
BssNI	GRCGYC	2 cut(s)	5731, 6507
BssSI	CACGAG	2 cut(s)	2691, 6359
BssT1I	CCWWGG	9 cut(s)	339, 870, 956, 1164, 1986, 4476, 4521, 4818, 5686
Bst1107I	GTATAC	3 cut(s)	551, 3515, 4787
Bst2BI	CACGAG	2 cut(s)	2691, 6359
Bst2UI	CCWGG	3 cut(s)	1046, 1438, 6191
Bst6I	CTCTTC	5 cut(s)	104, 1621, 2876, 6444, 6552
BstACI	GRCGYC	2 cut(s)	5731, 6507
BstAFI	CTTAAG	1 cut(s)	6200
BstAPI	GCANNNNNTGC	3 cut(s)	2275, 5174, 5795
BstBAI	YACGTR	3 cut(s)	554, 1286, 5989
BstBI	TTCGAA	5 cut(s)	2325, 2468, 3496, 3694, 5224
BstDSI	CCRYGG	3 cut(s)	4476, 4818, 5686
BstFNI	CGCG	1 cut(s)	1460
BstH2I	RGCGCY	2 cut(s)	832, 5267
BstHHI	GCGC	6 cut(s)	413, 831, 1462, 3350, 5266, 5789
BstMCI	CGRYCG	1 cut(s)	5911
BstNI	CCWGG	3 cut(s)	1046, 1438, 6191
BstNSI	RCATGY	8 cut(s)	437, 790, 869, 1390, 2064, 2615, 3742, 6263
BstPAI	GACNNNNGTC	3 cut(s)	723, 855, 2304
BstSCI	CCNGG	4 cut(s)	1044, 1436, 4617, 6189
BstSFI	CTRYAG	2 cut(s)	2276, 3446
BstSLI	GKGCMC	1 cut(s)	5239
BstUI	CGCG	1 cut(s)	1460
BstV2I	GAAGAC	9 cut(s)	719, 1616, 1823, 2354, 2608, 3102, 3678, 5213, 6510
BstX2I	RGATCY	9 cut(s)	970, 1214, 1990, 2317, 3142, 3757, 3809, 4822, 5644
BstXI	CCANNNNNNTGG	1 cut(s)	6099
BstYI	RGATCY	9 cut(s)	970, 1214, 1990, 2317, 3142, 3757, 3809, 4822, 5644
BstZ17I	GTATAC	3 cut(s)	551, 3515, 4787
Bsu15I	ATCGAT	1 cut(s)	3430
Bsu36I	CCTNAGG	1 cut(s)	6325
BsuI	GTATCC	3 cut(s)	1281, 3595, 6169
BsuRI	GGCC	6 cut(s)	575, 914, 1238, 1870, 3030, 3787
BsuTUI	ATCGAT	1 cut(s)	3430
BtgI	CCRYGG	3 cut(s)	4476, 4818, 5686
BtrI	CACGTC	2 cut(s)	1821, 4509
BtsI	GCAGTG	4 cut(s)	1056, 4074, 5406, 6018
BveI	ACCTGC	3 cut(s)	2533, 3112, 5118
CaiI	CAGNNNCTG	4 cut(s)	3257, 3925, 6332, 6433
CfoI	GCGC	6 cut(s)	413, 831, 1462, 3350, 5266, 5789
Cfr10I	RCCGGY	1 cut(s)	6155
Cfr13I	GGNCC	7 cut(s)	840, 1236, 3571, 3786, 4111, 5255, 5961
ClaI	ATCGAT	1 cut(s)	3430
CseI	GACGC	1 cut(s)	1529
Csp6I	GTAC	9 cut(s)	170, 597, 1448, 2801, 2977, 4895, 5972, 6263, 6392
CspCI	CAANNNNNGTGG	4 cut(s)	606, 628, 641, 663
CviQI	GTAC	9 cut(s)	170, 597, 1448, 2801, 2977, 4895, 5972, 6263, 6392
DraI	TTTAAA	5 cut(s)	196, 1344, 1830, 3316, 6246
DraIII	CACNNNGTG	1 cut(s)	6364
DrdI	GACNNNNNNGTC	1 cut(s)	3260
DseDI	GACNNNNNNGTC	1 cut(s)	3260
EaeI	YGGCCR	1 cut(s)	1868
Eam1104I	CTCTTC	5 cut(s)	104, 1621, 2876, 6444, 6552
EarI	CTCTTC	5 cut(s)	104, 1621, 2876, 6444, 6552
Ecl136II	GAGCTC	1 cut(s)	148
Eco130I	CCWWGG	9 cut(s)	339, 870, 956, 1164, 1986, 4476, 4521, 4818, 5686
Eco147I	AGGCCT	1 cut(s)	575
Eco24I	GRGCYC	2 cut(s)	150, 156
Eco31I	GGTCTC	2 cut(s)	67, 338
Eco32I	GATATC	2 cut(s)	130, 1921
Eco47I	GGWCC	5 cut(s)	840, 3571, 4111, 5255, 5961
Eco47III	AGCGCT	1 cut(s)	830
Eco53kI	GAGCTC	1 cut(s)	148
Eco81I	CCTNAGG	1 cut(s)	6325
Eco88I	CYCGRG	1 cut(s)	149
EcoICRI	GAGCTC	1 cut(s)	148
EcoO109I	RGGNCCY	1 cut(s)	3786
EcoRI	GAATTC	3 cut(s)	1378, 2287, 2464
EcoRII	CCWGG	3 cut(s)	1044, 1436, 6189
EcoRV	GATATC	2 cut(s)	130, 1921
EcoT14I	CCWWGG	9 cut(s)	339, 870, 956, 1164, 1986, 4476, 4521, 4818, 5686
EcoT22I	ATGCAT	5 cut(s)	592, 2271, 5186, 5285, 6305
EcoT38I	GRGCYC	2 cut(s)	150, 156
ErhI	CCWWGG	9 cut(s)	339, 870, 956, 1164, 1986, 4476, 4521, 4818, 5686
Esp3I	CGTCTC	1 cut(s)	5561
FalI	AAGNNNNNCTT	8 cut(s)	4169, 4201, 4423, 4455, 4969, 5001, 6441, 6473
FaqI	GGGAC	4 cut(s)	2124, 3760, 4079, 4897
FauI	CCCGC	2 cut(s)	894, 2750
FbaI	TGATCA	6 cut(s)	918, 1150, 3046, 3334, 5241, 5701
FblI	GTMKAC	4 cut(s)	550, 1928, 3514, 4786
FriOI	GRGCYC	2 cut(s)	150, 156
GlaI	GCGC	6 cut(s)	412, 830, 1461, 3349, 5265, 5788
GsaI	CCCAGC	4 cut(s)	257, 1237, 3244, 4325
GsuI	CTGGAG	3 cut(s)	786, 3305, 3848
HaeII	RGCGCY	2 cut(s)	832, 5267
HaeIII	GGCC	6 cut(s)	575, 914, 1238, 1870, 3030, 3787
HapII	CCGG	3 cut(s)	1423, 4619, 6156
HgaI	GACGC	1 cut(s)	1529
HhaI	GCGC	6 cut(s)	413, 831, 1462, 3350, 5266, 5789
Hin1I	GRCGYC	2 cut(s)	5731, 6507
Hin6I	GCGC	6 cut(s)	411, 829, 1460, 3348, 5264, 5787
HinP1I	GCGC	6 cut(s)	411, 829, 1460, 3348, 5264, 5787
HincII	GTYRAC	3 cut(s)	1864, 2309, 5878
HindII	GTYRAC	3 cut(s)	1864, 2309, 5878
HindIII	AAGCTT	5 cut(s)	1744, 2791, 3551, 5614, 6027
HpaI	GTTAAC	1 cut(s)	1864
HpaII	CCGG	3 cut(s)	1423, 4619, 6156
HphI	GGTGA	8 cut(s)	1385, 1660, 3841, 4154, 4346, 5632, 6007, 6581
Hpy99I	CGWCG	4 cut(s)	369, 4510, 5733, 6512
Hsp92I	GRCGYC	2 cut(s)	5731, 6507
HspAI	GCGC	6 cut(s)	411, 829, 1460, 3348, 5264, 5787
Ksp22I	TGATCA	6 cut(s)	918, 1150, 3046, 3334, 5241, 5701
KspAI	GTTAAC	1 cut(s)	1864
MbiI	CCGCTC	1 cut(s)	6567
MfeI	CAATTG	3 cut(s)	3846, 4080, 4305
MflI	RGATCY	9 cut(s)	970, 1214, 1990, 2317, 3142, 3757, 3809, 4822, 5644
MhlI	GDGCHC	7 cut(s)	150, 156, 517, 663, 3293, 5239, 6255
MlsI	TGGCCA	1 cut(s)	1870
MluNI	TGGCCA	1 cut(s)	1870
MmeI	TCCRAC	2 cut(s)	698, 3940
Mox20I	TGGCCA	1 cut(s)	1870
Mph1103I	ATGCAT	5 cut(s)	592, 2271, 5186, 5285, 6305
MroXI	GAANNNNTTC	7 cut(s)	2628, 2700, 3066, 4300, 4960, 4981, 6477
MscI	TGGCCA	1 cut(s)	1870
MslI	CAYNNNNRTG	3 cut(s)	2637, 3158, 6258
Msp20I	TGGCCA	1 cut(s)	1870
MspA1I	CMGCKG	7 cut(s)	119, 934, 2846, 5171, 5217, 5354, 6352
MspCI	CTTAAG	1 cut(s)	6200
MspI	CCGG	3 cut(s)	1423, 4619, 6156
MspR9I	CCNGG	4 cut(s)	1046, 1438, 4619, 6191
MunI	CAATTG	3 cut(s)	3846, 4080, 4305
Mva1269I	GAATGC	6 cut(s)	889, 1665, 2269, 4785, 5186, 5614
MvaI	CCWGG	3 cut(s)	1046, 1438, 6191
MvnI	CGCG	1 cut(s)	1460
NciI	CCSGG	1 cut(s)	4619
NcoI	CCATGG	3 cut(s)	4476, 4818, 5686
NlaIV	GGNNCC	9 cut(s)	1421, 1427, 1992, 2811, 3526, 4055, 4647, 4816, 5531
NmeAIII	GCCGAG	1 cut(s)	2249
NsiI	ATGCAT	5 cut(s)	592, 2271, 5186, 5285, 6305
NspI	RCATGY	8 cut(s)	437, 790, 869, 1390, 2064, 2615, 3742, 6263
NspV	TTCGAA	5 cut(s)	2325, 2468, 3496, 3694, 5224
PasI	CCCWGGG	1 cut(s)	1437
PceI	AGGCCT	1 cut(s)	575
PciI	ACATGT	2 cut(s)	1386, 6259
PctI	GAATGC	6 cut(s)	889, 1665, 2269, 4785, 5186, 5614
PdmI	GAANNNNTTC	7 cut(s)	2628, 2700, 3066, 4300, 4960, 4981, 6477
Ppu21I	YACGTR	3 cut(s)	554, 1286, 5989
PscI	ACATGT	2 cut(s)	1386, 6259
PshAI	GACNNNNGTC	3 cut(s)	723, 855, 2304
PshBI	ATTAAT	2 cut(s)	2853, 5055
PsiI	TTATAA	2 cut(s)	4878, 4907
Psp124BI	GAGCTC	1 cut(s)	150
Psp1406I	AACGTT	1 cut(s)	4422
Psp6I	CCWGG	3 cut(s)	1044, 1436, 6189
PspFI	CCCAGC	4 cut(s)	253, 1233, 3240, 4321
PspGI	CCWGG	3 cut(s)	1044, 1436, 6189
PspN4I	GGNNCC	9 cut(s)	1421, 1427, 1992, 2811, 3526, 4055, 4647, 4816, 5531
PspPI	GGNCC	7 cut(s)	840, 1236, 3571, 3786, 4111, 5255, 5961
PsrI	GAACNNNNNNTAC	2 cut(s)	2793, 2825
PstI	CTGCAG	2 cut(s)	2280, 3450
PstNI	CAGNNNCTG	4 cut(s)	3257, 3925, 6332, 6433
PsuI	RGATCY	9 cut(s)	970, 1214, 1990, 2317, 3142, 3757, 3809, 4822, 5644
PvuII	CAGCTG	6 cut(s)	119, 934, 2846, 5171, 5217, 5354
RsaI	GTAC	9 cut(s)	171, 598, 1449, 2802, 2978, 4896, 5973, 6264, 6393
RsaNI	GTAC	9 cut(s)	170, 597, 1448, 2801, 2977, 4895, 5972, 6263, 6392
RseI	CAYNNNNRTG	3 cut(s)	2637, 3158, 6258
SacI	GAGCTC	1 cut(s)	150
Sau96I	GGNCC	7 cut(s)	840, 1236, 3571, 3786, 4111, 5255, 5961
ScaI	AGTACT	1 cut(s)	171
ScrFI	CCNGG	4 cut(s)	1046, 1438, 4619, 6191
SduI	GDGCHC	7 cut(s)	150, 156, 517, 663, 3293, 5239, 6255
SfcI	CTRYAG	2 cut(s)	2276, 3446
SfuI	TTCGAA	5 cut(s)	2325, 2468, 3496, 3694, 5224
SinI	GGWCC	5 cut(s)	840, 3571, 4111, 5255, 5961
SmiI	ATTTAAAT	1 cut(s)	1830
SmiMI	CAYNNNNRTG	3 cut(s)	2637, 3158, 6258
SseBI	AGGCCT	1 cut(s)	575
SspI	AATATT	1 cut(s)	4496
SstI	GAGCTC	1 cut(s)	150
StuI	AGGCCT	1 cut(s)	575
StyD4I	CCNGG	4 cut(s)	1044, 1436, 4617, 6189
StyI	CCWWGG	9 cut(s)	339, 870, 956, 1164, 1986, 4476, 4521, 4818, 5686
SwaI	ATTTAAAT	1 cut(s)	1830
TaqII	GACCGA	3 cut(s)	3064, 5925, 6296
TatI	WGTACW	2 cut(s)	169, 2800
TauI	GCSGC	4 cut(s)	1292, 1460, 2611, 4582
TspGWI	ACGGA	5 cut(s)	2111, 2627, 4066, 5831, 5895
Vha464I	CTTAAG	1 cut(s)	6200
VneI	GTGCAC	1 cut(s)	5235
VpaK11BI	GGWCC	5 cut(s)	840, 3571, 4111, 5255, 5961
VspI	ATTAAT	2 cut(s)	2853, 5055
XbaI	TCTAGA	1 cut(s)	163
XceI	RCATGY	8 cut(s)	437, 790, 869, 1390, 2064, 2615, 3742, 6263
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1246, 5107, 6484
XmiI	GTMKAC	4 cut(s)	550, 1928, 3514, 4786
XmnI	GAANNNNTTC	7 cut(s)	2628, 2700, 3066, 4300, 4960, 4981, 6477
ZraI	GACGTC	2 cut(s)	5732, 6508
ZrmI	AGTACT	1 cut(s)	171
Zsp2I	ATGCAT	5 cut(s)	592, 2271, 5186, 5285, 6305

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.